Carg25184 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25184
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ethylene-responsive transcription factor ERF039
Location	Cucurbita_argyrosperma_scaffold_199 : 258658 .. 259275 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATCCTCTTCAGAGATTCCAGTTTCAGTCGTCGTCGTCGGACATGAAAGAAAAGAACTCGAAGAAGATGAAGCTCGGGAACGACGGCAAGCATCCGACATATCGCGGCGTCCGAATGCGGCAATGGGGAAAATGGGTATCAGAAATCAGAGAACCCAAGAAGAAATCCAGAATTTGGTTGGGTACATTTTCCACTCCCGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACCATCAAAGGTCATTCCGCTTACCTCAACTTCCCGGAGTTGGCTCACCGATTCCCCCGTCCCGCTAGCTCCTCCGCTAAGGACATTCGAGCGGCCGCCGCCAAAGCCGCGACGTTTCCCATTAATTCCACTGATGAAGACGACGACGATGCTGCCTCTCAATCCGACCGCAACCGCTCTCCCTCCTCTGTCGCCGCCGCCGCGAAATCTCCCGGAGAAATCGATGATCCGTTCTTCGATCTTCCCGATCTGTTTCTTCATCCCAATCACCAAATTGGTACATTCTGTTTCTCTCAAATGCTTCCGATTGACGGCTTCGACTCTGCTTTCGGCCGCCCGCCGTCGCCGTCGGAATATTTCGCCGCCACTCCTCCTTGA

mRNA sequence

ATGGAAGATCCTCTTCAGAGATTCCAGTTTCAGTCGTCGTCGTCGGACATGAAAGAAAAGAACTCGAAGAAGATGAAGCTCGGGAACGACGGCAAGCATCCGACATATCGCGGCGTCCGAATGCGGCAATGGGGAAAATGGGTATCAGAAATCAGAGAACCCAAGAAGAAATCCAGAATTTGGTTGGGTACATTTTCCACTCCCGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACCATCAAAGGTCATTCCGCTTACCTCAACTTCCCGGAGTTGGCTCACCGATTCCCCCGTCCCGCTAGCTCCTCCGCTAAGGACATTCGAGCGGCCGCCGCCAAAGCCGCGACGTTTCCCATTAATTCCACTGATGAAGACGACGACGATGCTGCCTCTCAATCCGACCGCAACCGCTCTCCCTCCTCTGTCGCCGCCGCCGCGAAATCTCCCGGAGAAATCGATGATCCGTTCTTCGATCTTCCCGATCTGTTTCTTCATCCCAATCACCAAATTGGTACATTCTGTTTCTCTCAAATGCTTCCGATTGACGGCTTCGACTCTGCTTTCGGCCGCCCGCCGTCGCCGTCGGAATATTTCGCCGCCACTCCTCCTTGA

Coding sequence (CDS)

ATGGAAGATCCTCTTCAGAGATTCCAGTTTCAGTCGTCGTCGTCGGACATGAAAGAAAAGAACTCGAAGAAGATGAAGCTCGGGAACGACGGCAAGCATCCGACATATCGCGGCGTCCGAATGCGGCAATGGGGAAAATGGGTATCAGAAATCAGAGAACCCAAGAAGAAATCCAGAATTTGGTTGGGTACATTTTCCACTCCCGAAATGGCCGCCAGAGCTCACGACGTCGCCGCCAGAACCATCAAAGGTCATTCCGCTTACCTCAACTTCCCGGAGTTGGCTCACCGATTCCCCCGTCCCGCTAGCTCCTCCGCTAAGGACATTCGAGCGGCCGCCGCCAAAGCCGCGACGTTTCCCATTAATTCCACTGATGAAGACGACGACGATGCTGCCTCTCAATCCGACCGCAACCGCTCTCCCTCCTCTGTCGCCGCCGCCGCGAAATCTCCCGGAGAAATCGATGATCCGTTCTTCGATCTTCCCGATCTGTTTCTTCATCCCAATCACCAAATTGGTACATTCTGTTTCTCTCAAATGCTTCCGATTGACGGCTTCGACTCTGCTTTCGGCCGCCCGCCGTCGCCGTCGGAATATTTCGCCGCCACTCCTCCTTGA

Protein sequence

MEDPLQRFQFQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKAATFPINSTDEDDDDAASQSDRNRSPSSVAAAAKSPGEIDDPFFDLPDLFLHPNHQIGTFCFSQMLPIDGFDSAFGRPPSPSEYFAATPP

Homology

[Close]

BLAST of Carg25184 vs. NCBI nr
Match: XP_022945031.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita moschata])

HSP 1 Score: 342.8 bits (878), Expect = 8.0e-91
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MEDPLQRFQFQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRI 60
           MEDPLQRFQFQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRI
Sbjct: 1   MEDPLQRFQFQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRI 60

Query: 61  WLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKXXXXX 120
           WLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKXXXXX
Sbjct: 61  WLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFLHPNHQIGTFCFSQM 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFLHPNHQIGTFCFSQM
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFLHPNHQIGTFCFSQM 180

Query: 181 LPIDGFDSAFGRPPSPSEYFAATPP 206
           LPIDGFDSAFGRPPSPSEYFAATPP
Sbjct: 181 LPIDGFDSAFGRPPSPSEYFAATPP 205

[Close]

BLAST of Carg25184 vs. NCBI nr
Match: XP_023005548.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita maxima])

HSP 1 Score: 323.6 bits (828), Expect = 5.0e-85
Identity = 200/208 (96.15%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 1   MEDPLQRFQFQ-SSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR 60
           MEDPLQRFQFQ SSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR
Sbjct: 1   MEDPLQRFQFQSSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR 60

Query: 61  IWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAA--AAKXX 120
           IWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAA     XX
Sbjct: 61  IWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFLHPNHQIGTFCF 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SPGEIDDPFFDLPDLFLHPNHQIGTFCF
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEIDDPFFDLPDLFLHPNHQIGTFCF 180

Query: 181 SQMLPIDGFDSAFGRPPSPSEYFAATPP 206
           SQMLPIDGFDSAFGRPPSPSEYF+ATPP
Sbjct: 181 SQMLPIDGFDSAFGRPPSPSEYFSATPP 208

[Close]

BLAST of Carg25184 vs. NCBI nr
Match: XP_023540688.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 9.4e-84
Identity = 199/211 (94.31%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MEDPLQRFQFQ-SSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR 60
           MEDPLQRFQFQ SSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR
Sbjct: 1   MEDPLQRFQFQSSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSR 60

Query: 61  IWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAA-----AA 120
           IWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAA       
Sbjct: 61  IWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAXXXXXXX 120

Query: 121 KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFLHPNHQIGT 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PGEIDDPFFDLPDLFLHPNHQIGT
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGEIDDPFFDLPDLFLHPNHQIGT 180

Query: 181 FCFSQMLPIDGFDSAFGRPPSPSEYFAATPP 206
           FC SQMLPIDGFDSAFGRPPSPSEYFAATPP
Sbjct: 181 FCLSQMLPIDGFDSAFGRPPSPSEYFAATPP 211

[Close]

BLAST of Carg25184 vs. NCBI nr
Match: XP_008448820.1 (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis melo])

HSP 1 Score: 267.7 bits (683), Expect = 3.3e-68
Identity = 146/212 (68.87%), Postives = 153/212 (72.17%), Query Frame = 0


Query: 1   MEDPLQRFQFQSSSSD--------MKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIR 60
           MEDPLQRFQF S SS         +KEK SKK+KLG+DGKHPTYRGVRMRQWGKWVSEIR
Sbjct: 1   MEDPLQRFQFHSQSSSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQWGKWVSEIR 60

Query: 61  EPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAA 120
           EPKKKSRIWLGTFSTPEMAARAHDVAA+TIKGHSAYLNFPELAHR PRPASSS KDIRAA
Sbjct: 61  EPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRAA 120

Query: 121 AAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFL-HPNHQ 180
           AAK                                 KS GEIDD FFDLPDLF+  PNHQ
Sbjct: 121 AAK-----AALFNDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPNHQ 180

Query: 181 IGTFCFSQMLPIDGFDSAFGR---PPSPSEYF 201
           I TFCFSQ +PIDGFDS F R   P SPS+YF
Sbjct: 181 IDTFCFSQFVPIDGFDSVFTRPLSPSSPSDYF 207

[Close]

BLAST of Carg25184 vs. NCBI nr
Match: XP_004147220.1 (PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus] >KGN55849.1 hypothetical protein Csa_3G019400 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 1.5e-65
Identity = 142/212 (66.98%), Postives = 150/212 (70.75%), Query Frame = 0


Query: 1   MEDPLQRFQFQSSSSD--------MKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIR 60
           MEDPLQRFQ  S SS         +K+K SKK+K+GND KHPTYRGVRMRQWGKWVSEIR
Sbjct: 1   MEDPLQRFQLHSQSSSSSSDIKNCIKQKASKKVKIGNDDKHPTYRGVRMRQWGKWVSEIR 60

Query: 61  EPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAA 120
           EPKKKSRIWLGTFST EMAARAHDVAA+TIKGHSAYLNFPELAHR PRPASSS KDIRAA
Sbjct: 61  EPKKKSRIWLGTFSTSEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRAA 120

Query: 121 AAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFL-HPNHQ 180
           AAK                                 KS GEIDD FFDLPDLF+  PNHQ
Sbjct: 121 AAK-----AALFNDEQNPGAKSEMNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPNHQ 180

Query: 181 IGTFCFSQMLPIDGFDSAFGRPPSP---SEYF 201
           I TFCFSQ +PIDGFDS F RP SP   S+YF
Sbjct: 181 IDTFCFSQFVPIDGFDSVFTRPSSPSSSSDYF 207

[Close]

BLAST of Carg25184 vs. TAIR10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-35
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 13  SSSDMKEKNSKKMKLGND-GKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMA 72
           S     E++ KK K G D GKHP YRGVRMR WGKWVSEIREP+KKSRIWLGTF TPEMA
Sbjct: 27  SDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMA 86

Query: 73  ARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAK 116
           ARAHDVAA +IKG +A LNFPELA  FPRP S S +DI+ AA K
Sbjct: 87  ARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALK 130

[Close]

BLAST of Carg25184 vs. TAIR10
Match: AT4G16750.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 142.5 bits (358), Expect = 2.9e-34
Identity = 86/173 (49.71%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 1   MEDPLQRFQFQSSSSDMKEKNSKKMKLGND----GKHPTYRGVRMRQWGKWVSEIREPKK 60
           M+D       ++  S + EK  K  K  N+     K P +RGVRMRQWGKWVSEIREP+K
Sbjct: 1   MQDSSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRK 60

Query: 61  KSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKX 120
           KSRIWLGTFSTPEMAARAHDVAA  IKG SA+LNFPELA+  PRPAS+  KDI+ AAA  
Sbjct: 61  KSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAA-- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFLHPN 170
                                            S    DD F DLPDL L  N
Sbjct: 121 ---------------AAAAVDWKAPESPSSTVTSSPVADDAFSDLPDLLLDVN 156

[Close]

BLAST of Carg25184 vs. TAIR10
Match: AT2G35700.1 (ERF family protein 38)

HSP 1 Score: 141.4 bits (355), Expect = 6.4e-34
Identity = 106/144 (73.61%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 32  KHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNF 91
           KHP +RGVRMRQWGKWVSEIREPKKKSRIWLGTFST EMAARAHDVAA  IKG SA+LNF
Sbjct: 41  KHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNF 100

Query: 92  PELAHRFPRPASSSAKDIRAAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSP 151
           PELA+  PRPAS+  KDI      XXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 101 PELAYHLPRPASADPKDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMIALS-- 160

Query: 152 GEIDDPFFDLPDLFLHPNHQIGTF 176
              DD F DLPDL L+ NH I  F
Sbjct: 161 ---DDAFSDLPDLLLNVNHNIDGF 179

[Close]

BLAST of Carg25184 vs. TAIR10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 2.4e-33
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 10  FQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPE 69
           +++S+   + +  KK  + + GKHP YRGVR R WGKWVSEIREP+KKSRIWLGTF +PE
Sbjct: 10  WEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPE 69

Query: 70  MAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAK 116
           MAARAHDVAA +IKG SA LNFP+LA  FPRP+S S +DI+ AA K
Sbjct: 70  MAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALK 115

[Close]

BLAST of Carg25184 vs. TAIR10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-32
Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 32  KHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNF 91
           KHPTYRGVRMR WGKWVSEIREP+KKSRIWLGT+ T EMAARAHDVAA  IKG +AYLNF
Sbjct: 96  KHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNF 155

Query: 92  PELAHRFPRPASSSAKDIRAAAA 115
           P+LA   PRP ++S KDI+AAA+
Sbjct: 156 PKLAGELPRPVTNSPKDIQAAAS 178

[Close]

BLAST of Carg25184 vs. Swiss-Prot
Match: sp|Q9LYD3|DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.1e-34
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 13  SSSDMKEKNSKKMKLGND-GKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMA 72
           S     E++ KK K G D GKHP YRGVRMR WGKWVSEIREP+KKSRIWLGTF TPEMA
Sbjct: 27  SDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMA 86

Query: 73  ARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAK 116
           ARAHDVAA +IKG +A LNFPELA  FPRP S S +DI+ AA K
Sbjct: 87  ARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALK 130

[Close]

BLAST of Carg25184 vs. Swiss-Prot
Match: sp|Q9SUK8|ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 GN=ERF039 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.2e-33
Identity = 86/173 (49.71%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 1   MEDPLQRFQFQSSSSDMKEKNSKKMKLGND----GKHPTYRGVRMRQWGKWVSEIREPKK 60
           M+D       ++  S + EK  K  K  N+     K P +RGVRMRQWGKWVSEIREP+K
Sbjct: 1   MQDSSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRK 60

Query: 61  KSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKX 120
           KSRIWLGTFSTPEMAARAHDVAA  IKG SA+LNFPELA+  PRPAS+  KDI+ AAA  
Sbjct: 61  KSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAA-- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFLHPN 170
                                            S    DD F DLPDL L  N
Sbjct: 121 ---------------AAAAVDWKAPESPSSTVTSSPVADDAFSDLPDLLLDVN 156

[Close]

BLAST of Carg25184 vs. Swiss-Prot
Match: sp|Q9ZQP3|ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 106/144 (73.61%), Postives = 111/144 (77.08%), Query Frame = 0


Query: 32  KHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNF 91
           KHP +RGVRMRQWGKWVSEIREPKKKSRIWLGTFST EMAARAHDVAA  IKG SA+LNF
Sbjct: 41  KHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNF 100

Query: 92  PELAHRFPRPASSSAKDIRAAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSP 151
           PELA+  PRPAS+  KDI      XXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 101 PELAYHLPRPASADPKDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMIALS-- 160

Query: 152 GEIDDPFFDLPDLFLHPNHQIGTF 176
              DD F DLPDL L+ NH I  F
Sbjct: 161 ---DDAFSDLPDLLLNVNHNIDGF 179

[Close]

BLAST of Carg25184 vs. Swiss-Prot
Match: sp|Q39127|TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.4e-32
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0


Query: 10  FQSSSSDMKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPE 69
           +++S+   + +  KK  + + GKHP YRGVR R WGKWVSEIREP+KKSRIWLGTF +PE
Sbjct: 10  WEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPE 69

Query: 70  MAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAK 116
           MAARAHDVAA +IKG SA LNFP+LA  FPRP+S S +DI+ AA K
Sbjct: 70  MAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALK 115

[Close]

BLAST of Carg25184 vs. Swiss-Prot
Match: sp|Q8LBQ7|ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-31
Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 32  KHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNF 91
           KHPTYRGVRMR WGKWVSEIREP+KKSRIWLGT+ T EMAARAHDVAA  IKG +AYLNF
Sbjct: 96  KHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNF 155

Query: 92  PELAHRFPRPASSSAKDIRAAAA 115
           P+LA   PRP ++S KDI+AAA+
Sbjct: 156 PKLAGELPRPVTNSPKDIQAAAS 178

[Close]

BLAST of Carg25184 vs. TrEMBL
Match: tr|A0A1S3BK05|A0A1S3BK05_CUCME (ethylene-responsive transcription factor ERF039 OS=Cucumis melo OX=3656 GN=LOC103490873 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.2e-68
Identity = 146/212 (68.87%), Postives = 153/212 (72.17%), Query Frame = 0


Query: 1   MEDPLQRFQFQSSSSD--------MKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIR 60
           MEDPLQRFQF S SS         +KEK SKK+KLG+DGKHPTYRGVRMRQWGKWVSEIR
Sbjct: 1   MEDPLQRFQFHSQSSSSSSDIKNCIKEKTSKKVKLGSDGKHPTYRGVRMRQWGKWVSEIR 60

Query: 61  EPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAA 120
           EPKKKSRIWLGTFSTPEMAARAHDVAA+TIKGHSAYLNFPELAHR PRPASSS KDIRAA
Sbjct: 61  EPKKKSRIWLGTFSTPEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRAA 120

Query: 121 AAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFL-HPNHQ 180
           AAK                                 KS GEIDD FFDLPDLF+  PNHQ
Sbjct: 121 AAK-----AALFNDEQNPGAKSELNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPNHQ 180

Query: 181 IGTFCFSQMLPIDGFDSAFGR---PPSPSEYF 201
           I TFCFSQ +PIDGFDS F R   P SPS+YF
Sbjct: 181 IDTFCFSQFVPIDGFDSVFTRPLSPSSPSDYF 207

[Close]

BLAST of Carg25184 vs. TrEMBL
Match: tr|A0A0A0L472|A0A0A0L472_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019400 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.0e-65
Identity = 142/212 (66.98%), Postives = 150/212 (70.75%), Query Frame = 0


Query: 1   MEDPLQRFQFQSSSSD--------MKEKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIR 60
           MEDPLQRFQ  S SS         +K+K SKK+K+GND KHPTYRGVRMRQWGKWVSEIR
Sbjct: 1   MEDPLQRFQLHSQSSSSSSDIKNCIKQKASKKVKIGNDDKHPTYRGVRMRQWGKWVSEIR 60

Query: 61  EPKKKSRIWLGTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAA 120
           EPKKKSRIWLGTFST EMAARAHDVAA+TIKGHSAYLNFPELAHR PRPASSS KDIRAA
Sbjct: 61  EPKKKSRIWLGTFSTSEMAARAHDVAAKTIKGHSAYLNFPELAHRLPRPASSSPKDIRAA 120

Query: 121 AAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSPGEIDDPFFDLPDLFL-HPNHQ 180
           AAK                                 KS GEIDD FFDLPDLF+  PNHQ
Sbjct: 121 AAK-----AALFNDEQNPGAKSEMNLNCCGSSAVAVKSGGEIDDTFFDLPDLFIDDPNHQ 180

Query: 181 IGTFCFSQMLPIDGFDSAFGRPPSP---SEYF 201
           I TFCFSQ +PIDGFDS F RP SP   S+YF
Sbjct: 181 IDTFCFSQFVPIDGFDSVFTRPSSPSSSSDYF 207

[Close]

BLAST of Carg25184 vs. TrEMBL
Match: tr|A0A2I4EIJ4|A0A2I4EIJ4_9ROSI (ethylene-responsive transcription factor ERF039-like OS=Juglans regia OX=51240 GN=LOC108989912 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.4e-40
Identity = 99/194 (51.03%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 8   FQFQSSSSDMKE-----KNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWL 67
           F  Q+SS  ++E     +N K++K  +DGKHPTYRGVR+RQWGKWVSEIREP+KKSRIWL
Sbjct: 41  FTVQNSSKRVQEAKDGDENKKRVKSRDDGKHPTYRGVRIRQWGKWVSEIREPRKKSRIWL 100

Query: 68  GTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKXXXXXXX 127
           GTFSTPEMAARAHDVAA TIKG SA+LNFPELA   PRPASSS KDI+AAAAK       
Sbjct: 101 GTFSTPEMAARAHDVAALTIKGQSAFLNFPELAQELPRPASSSPKDIQAAAAKAAAMNFP 160

Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXKSPGE-----------IDDPFFDLPDLFLHPNHQ 186
                                      S               DD F DLPDL L   +Q
Sbjct: 161 KSHEAAKAVLSQSMLLTDPYSPCSTMASQDTRDSSTSPSNDIKDDAFLDLPDLLLDVRNQ 220

[Close]

BLAST of Carg25184 vs. TrEMBL
Match: tr|A0A2N9F0E7|A0A2N9F0E7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8465 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.1e-39
Identity = 99/185 (53.51%), Postives = 111/185 (60.00%), Query Frame = 0


Query: 6   QRFQFQSSSSDMKEKNSKKMKL---GNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWL 65
           Q+ + +    + K  N  K K+   G DGKHPTYRGVR+RQWGKWVSEIREP+KKSRIWL
Sbjct: 35  QKSRNKRGHEEAKNGNESKKKVKTSGEDGKHPTYRGVRIRQWGKWVSEIREPRKKSRIWL 94

Query: 66  GTFSTPEMAARAHDVAARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAK------- 125
           GTF TPEMAARAHDVAA TIKG SA+LNFPELA   PRPASSS KDI+AAAAK       
Sbjct: 95  GTFPTPEMAARAHDVAALTIKGKSAFLNFPELAQVLPRPASSSPKDIQAAAAKAAAMNFP 154

Query: 126 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSP-GEIDDPFFDLPDLFLHPNHQIG 179
                                              SP  E DD FFDLPDL L  N++I 
Sbjct: 155 RSHDEVEAELSQAILMAPHSPSSTMASHDTQESSSSPLNEKDDAFFDLPDLLLDVNNKID 214

[Close]

BLAST of Carg25184 vs. TrEMBL
Match: tr|A9PL76|A9PL76_POPTR (TINY-like protein OS=Populus trichocarpa OX=3694 GN=TINYL7 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.1e-39
Identity = 91/169 (53.85%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 19  EKNSKKMKLGNDGKHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTPEMAARAHDVA 78
           E + +  + GN G+HP+YRGVRMRQWGKWVSEIR+PKKKSRIWLGTFSTPEMAARAHDVA
Sbjct: 23  ESDKQAKRRGNAGRHPSYRGVRMRQWGKWVSEIRQPKKKSRIWLGTFSTPEMAARAHDVA 82

Query: 79  ARTIKGHSAYLNFPELAHRFPRPASSSAKDIRAAAAKXXXXXXXXXXXXXXXXXXXXXXX 138
           A TIKGHSA+LNFPELAH FPRPASSS KDI+AAAA                        
Sbjct: 83  ALTIKGHSAHLNFPELAHEFPRPASSSPKDIQAAAALAATLSCKTSQKGRETEAEAELML 142

Query: 139 XXXXXXXXXXKSPGEI----------DDPFFDLPDLFLHPNHQIGTFCF 178
                         E           DD F DLPD+    +HQ   FC+
Sbjct: 143 PRSLDSTLASNETQEYSLNSPLRDDDDDTFIDLPDILQGISHQFDEFCY 191

The following BLAST results are available for this feature:

BLAST of Carg25184 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945031.1	8.0e-91	100.00	ethylene-responsive transcription factor ERF038-like [Cucurbita moschata]	[more]
XP_023005548.1	5.0e-85	96.15	ethylene-responsive transcription factor ERF038-like [Cucurbita maxima]	[more]
XP_023540688.1	9.4e-84	94.31	ethylene-responsive transcription factor ERF038-like [Cucurbita pepo subsp. pepo...	[more]
XP_008448820.1	3.3e-68	68.87	PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis melo]	[more]
XP_004147220.1	1.5e-65	66.98	PREDICTED: ethylene-responsive transcription factor ERF039-like [Cucumis sativus...	[more]

BLAST of Carg25184 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11590.1	3.4e-35	71.15	Integrase-type DNA-binding superfamily protein	[more]
AT4G16750.1	2.9e-34	49.71	Integrase-type DNA-binding superfamily protein	[more]
AT2G35700.1	6.4e-34	73.61	ERF family protein 38	[more]
AT5G25810.1	2.4e-33	64.15	Integrase-type DNA-binding superfamily protein	[more]
AT2G44940.1	2.1e-32	77.11	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Carg25184 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LYD3\|DREB3_ARATH	6.1e-34	71.15	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9SUK8\|ERF39_ARATH	5.2e-33	49.71	Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9ZQP3\|ERF38_ARATH	1.2e-32	73.61	Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q39127\|TINY_ARATH	4.4e-32	64.15	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q8LBQ7\|ERF34_ARATH	3.7e-31	77.11	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg25184 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BK05\|A0A1S3BK05_CUCME	2.2e-68	68.87	ethylene-responsive transcription factor ERF039 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0L472\|A0A0A0L472_CUCSA	1.0e-65	66.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019400 PE=4 SV=1	[more]
tr\|A0A2I4EIJ4\|A0A2I4EIJ4_9ROSI	9.4e-40	51.03	ethylene-responsive transcription factor ERF039-like OS=Juglans regia OX=51240 G...	[more]
tr\|A0A2N9F0E7\|A0A2N9F0E7_FAGSY	6.1e-39	53.51	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8465 PE=4 SV=1	[more]
tr\|A9PL76\|A9PL76_POPTR	6.1e-39	53.85	TINY-like protein OS=Populus trichocarpa OX=3694 GN=TINYL7 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR017392	AP2/ERF-transcript_factor
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25184-RA	Carg25184-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 58..74 score: 66.2 coord: 36..47 score: 70.15
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 35..98 e-value: 6.3E-36 score: 135.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 35..85 e-value: 1.5E-11 score: 44.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 35..92 score: 22.484
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 36..94 e-value: 2.43517E-31 score: 109.669
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 35..94 e-value: 1.8E-29 score: 103.3
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 7..164 e-value: 5.4E-17 score: 60.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..153
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 11..173
None	No IPR available	PANTHER	PTHR31985:SF77	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-RELATED	coord: 11..173
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 35..93

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25184	Cla005623	Watermelon (97103) v1	carwmB0526
Carg25184	Csa3G019400	Cucumber (Chinese Long) v2	carcuB0559
Carg25184	MELO3C013926	Melon (DHL92) v3.5.1	carmeB0535
Carg25184	ClCG10G002540	Watermelon (Charleston Gray)	carwcgB0513
Carg25184	CSPI03G02540	Wild cucumber (PI 183967)	carcpiB0565
Carg25184	Cucsa.321050	Cucumber (Gy14) v1	carcgyB0609
Carg25184	CmaCh06G007960	Cucurbita maxima (Rimu)	carcmaB0742
Carg25184	CmaCh16G011250	Cucurbita maxima (Rimu)	carcmaB0741
Carg25184	CmoCh06G008160	Cucurbita moschata (Rifu)	carcmoB0720
Carg25184	CmoCh16G011770	Cucurbita moschata (Rifu)	carcmoB0719
Carg25184	Lsi07G012820	Bottle gourd (USVL1VR-Ls)	carlsiB482
Carg25184	CsGy3G002470	Cucumber (Gy14) v2	carcgybB0536
Carg25184	MELO3C013926.2	Melon (DHL92) v3.6.1	carmedB0540
Carg25184	CsaV3_3G002570	Cucumber (Chinese Long) v3	carcucB0567
Carg25184	Cla97C10G187120	Watermelon (97103) v2	carwmbB0555

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25184	Carg24861	Silver-seed gourd	carcarB434

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25184	Cucurbita pepo (Zucchini)	carcpeB0750
Carg25184	Cucurbita pepo (Zucchini)	carcpeB0749