Lsi07G011020 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G011020
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCold-shock DNA-binding family protein
Locationchr07 : 16416031 .. 16416840 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAAGAGAGATTGACTGGTGTTGTTCAGTGGTTTAACGATTCCAAAGGCTTCGGCTTCATCAAGCCAGATGTAGAAGGTCCGGATCTGTTTGTTCATCAATCCTCCATTAAATCCGATGGTTACAGGAGCCTTGTCGTCGGAGATCATGTCGAGTTTCAGATCGCTCCTGGTGATGATGGCAAATCGAAAGCCATTGAGGTCGTTGCGCTCGATGGATCTTCGGGAAATCGGAGGGATAACTTTGGTGGTGGTGGTGGTGGAAGGGGTGGCCGCGGCGGAGGTGGCGGTGGAGGTTATGGGTTTGGTGGTTGGAGGGGAGGTGATAGGCGGAATGGGAACAGTGGGGCCGGTGGGGGTGGGTGTTATCAATGCGGTGAGCAAGGGCATTTGGCGAGAGACTGTACTCGTGCTAGTAACCGCGGCGGTGGCGGCGGAGGTGGCGGTGGGTGTTTTACTTGCGGTGAAGTTGGCCACTTAGCGAGGGATTGTCCACGAGGAAACAGTGGCGGAGGTGGAGGCGGCGGTGCCGGGGCTTGCTATAATTGTGGTGGTTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGGGCTGGAGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGCTTTAATTGTGGGGAATATGGGCATATAGCCAGAGATTGCCAGAATGAAAGCCGTGGCAGCGGCGGTGGCGGCGGAAGATTTGGTGGCGGCGGTGGCGGTGGCTCAAACACTTGCTTCAATTGTGGGAAATCGGGGCATTTTGCTAGGGAGTGTCCTGATGCACCTTGA

mRNA sequence

ATGGCGGAAGAGAGATTGACTGGTGTTGTTCAGTGGTTTAACGATTCCAAAGGCTTCGGCTTCATCAAGCCAGATGTAGAAGGTCCGGATCTGTTTGTTCATCAATCCTCCATTAAATCCGATGGTTACAGGAGCCTTGTCGTCGGAGATCATGTCGAGTTTCAGATCGCTCCTGGTGATGATGGCAAATCGAAAGCCATTGAGGTCGTTGCGCTCGATGGATCTTCGGGAAATCGGAGGGATAACTTTGGTGGTGGTGGTGGTGGAAGGGGTGGCCGCGGCGGAGGTGGCGGTGGAGGTTATGGGTTTGGTGGTTGGAGGGGAGGTGATAGGCGGAATGGGAACAGTGGGGCCGGTGGGGGTGGGTGTTATCAATGCGGTGAGCAAGGGCATTTGGCGAGAGACTGTACTCGTGCTAGTAACCGCGGCGGTGGCGGCGGAGGTGGCGGTGGGTGTTTTACTTGCGGTGAAGTTGGCCACTTAGCGAGGGATTGTCCACGAGGAAACAGTGGCGGAGGTGGAGGCGGCGGTGCCGGGGCTTGCTATAATTGTGGTGGTTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGGGCTGGAGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGCTTTAATTGTGGGGAATATGGGCATATAGCCAGAGATTGCCAGAATGAAAGCCGTGGCAGCGGCGGTGGCGGCGGAAGATTTGGTGGCGGCGGTGGCGGTGGCTCAAACACTTGCTTCAATTGTGGGAAATCGGGGCATTTTGCTAGGGAGTGTCCTGATGCACCTTGA

Coding sequence (CDS)

ATGGCGGAAGAGAGATTGACTGGTGTTGTTCAGTGGTTTAACGATTCCAAAGGCTTCGGCTTCATCAAGCCAGATGTAGAAGGTCCGGATCTGTTTGTTCATCAATCCTCCATTAAATCCGATGGTTACAGGAGCCTTGTCGTCGGAGATCATGTCGAGTTTCAGATCGCTCCTGGTGATGATGGCAAATCGAAAGCCATTGAGGTCGTTGCGCTCGATGGATCTTCGGGAAATCGGAGGGATAACTTTGGTGGTGGTGGTGGTGGAAGGGGTGGCCGCGGCGGAGGTGGCGGTGGAGGTTATGGGTTTGGTGGTTGGAGGGGAGGTGATAGGCGGAATGGGAACAGTGGGGCCGGTGGGGGTGGGTGTTATCAATGCGGTGAGCAAGGGCATTTGGCGAGAGACTGTACTCGTGCTAGTAACCGCGGCGGTGGCGGCGGAGGTGGCGGTGGGTGTTTTACTTGCGGTGAAGTTGGCCACTTAGCGAGGGATTGTCCACGAGGAAACAGTGGCGGAGGTGGAGGCGGCGGTGCCGGGGCTTGCTATAATTGTGGTGGTTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGGGCTGGAGGTGGAAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGCTTTAATTGTGGGGAATATGGGCATATAGCCAGAGATTGCCAGAATGAAAGCCGTGGCAGCGGCGGTGGCGGCGGAAGATTTGGTGGCGGCGGTGGCGGTGGCTCAAACACTTGCTTCAATTGTGGGAAATCGGGGCATTTTGCTAGGGAGTGTCCTGATGCACCTTGA

Protein sequence

MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDAP
Homology
[Close]
BLAST of Lsi07G011020 vs. Swiss-Prot
Match: CSP3_ARATH (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana GN=CSP3 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.0e-54
Identity = 158/300 (52.67%), Postives = 183/300 (61.00%), Query Frame = 1 

Query: 5   RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
           R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+
Sbjct: 10  RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69

Query: 65  KAIEVVALDGSSGNRRDNFGGGGGGRGGRGG----------GGGGGYGFGGWRGGDRRNG 124
           KAIEV A  G S N+++N   G GG     G          GG GG  FGG  GG RR+G
Sbjct: 70  KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGG--GGGRRSG 129

Query: 125 NSGAGGGGCYQCGEQGHLARDCTRAS--NRGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 184
               G G CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC RG SGG
Sbjct: 130 ----GEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC-RGGSGG 189

Query: 185 ---GGGGGAGA----CYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIAR 244
              GGGGG G+    CY CGG GH ARDC + G     GG  GGGG  C+ CG  GHIA+
Sbjct: 190 NRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG-----GGNVGGGGSTCYTCGGVGHIAK 249

Query: 245 DCQNESRGSGGGGGR----FGG----------------GGGGGSNTCFNCGKSGHFAREC 266
            C ++    GGGGGR     GG                GGGGGSN CF CGK GHFAREC
Sbjct: 250 VCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFAREC 297

[Close]
BLAST of Lsi07G011020 vs. Swiss-Prot
Match: CSP1_ARATH (Cold shock protein 1 OS=Arabidopsis thaliana GN=CSP1 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.1e-47
Identity = 148/290 (51.03%), Postives = 168/290 (57.93%), Query Frame = 1 

Query: 5   RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
           R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+
Sbjct: 10  RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69

Query: 65  KAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG----GGGGY-----GFGGWRGGDRRNGN 124
           KA+ V A  G S  + +N  G G  RGG G G    G  G+     G GG  GG  R   
Sbjct: 70  KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129

Query: 125 SGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPR----- 184
              GG GCY CG+ GH ARDCT A N   RG   GG  GC+TCG+VGH+ARDC +     
Sbjct: 130 ---GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGN 189

Query: 185 GNSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDC 244
           G+  G   GG   CY CG  GH ARDC +  A  G+   GGGG G C++CG  GHIARDC
Sbjct: 190 GDQRGAVKGGNDGCYTCGDVGHFARDCTQKVA-AGNVRSGGGGSGTCYSCGGVGHIARDC 249

Query: 245 ---QNESRG--SGGGGGRF-------GGGGGGGSNTCFNCGKSGHFAREC 266
              +  SRG    GG G         G GGGG  N C+ CGK GHFAREC
Sbjct: 250 ATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295

[Close]
BLAST of Lsi07G011020 vs. Swiss-Prot
Match: GRP2_NICSY (Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.1e-38
Identity = 124/242 (51.24%), Postives = 145/242 (59.92%), Query Frame = 1 

Query: 1   MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA 60
           MAEE   R  G V+WF+D KGFGFI PD  G DLFVHQS I+S+G+RSL  G+ VEF++ 
Sbjct: 1   MAEESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVE 60

Query: 61  PGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRG-GGGGGGYGFGGWRGGDR--RNG 120
            G DG++KA++V   DG++       GGGGGGRGG G GGG GGYG GG RGG R    G
Sbjct: 61  SGGDGRTKAVDVTGPDGAAVQGGRGGGGGGGGRGGGGYGGGSGGYG-GGGRGGSRGYGGG 120

Query: 121 NSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGG 180
           + G GGGG Y  G            S  GGGGGG GG                G  GGGG
Sbjct: 121 DGGYGGGGGYGGG------------SRYGGGGGGYGG---------------GGGYGGGG 180

Query: 181 GGGAGACYNCGGFGHLARDCNRGGAGGG----SGGGGGGGGGGCFNCGEYGHIARDCQNE 233
            GG   C+ CG  GH ARDC++ G GGG     GGGGGGGGGGC+ CGE GH AR+C + 
Sbjct: 181 SGGGSGCFKCGESGHFARDCSQSGGGGGGGRFGGGGGGGGGGGCYKCGEDGHFARECTSG 214

[Close]
BLAST of Lsi07G011020 vs. Swiss-Prot
Match: CSP2_ARATH (Cold shock protein 2 OS=Arabidopsis thaliana GN=CSP2 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 102/201 (50.75%), Postives = 123/201 (61.19%), Query Frame = 1 

Query: 4   ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
           ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ +
Sbjct: 9   ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68

Query: 64  SKAIEVVALDGS--SGNRRDNFGGGGGG-RGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 123
            KAI+V   DG+   GN      GG GG  GGRGGG G G G+GG  GG    G  G GG
Sbjct: 69  PKAIDVSGPDGAPVQGNSGGGSSGGRGGFGGGRGGGRGSGGGYGGGGGGYGGRGGGGRGG 128

Query: 124 GGCYQCGEQGHLARDCTRASNRGGGGGGG---GGCFTCGEVGHLARDCPRGNSGGGGGGG 183
             CY+CGE GH+ARDC+      GGGGGG   GG +  G  G+       G  G GGGGG
Sbjct: 129 SDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGGGYGGGGGGY-------GGGGRGGGGG 188

Query: 184 AGACYNCGGFGHLARDCNRGG 199
            G+CY+CG  GH ARDC  GG
Sbjct: 189 GGSCYSCGESGHFARDCTSGG 202

[Close]
BLAST of Lsi07G011020 vs. Swiss-Prot
Match: CSP4_ARATH (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana GN=CSP4 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.4e-32
Identity = 105/226 (46.46%), Postives = 122/226 (53.98%), Query Frame = 1 

Query: 4   ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
           +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 64  SKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGGGGC 123
            KAIEV   DG+        GG  GGRGG GGGGG        RGG R  G+ G G GG 
Sbjct: 73  PKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGG--------RGGGRGGGSYGGGYGG- 132

Query: 124 YQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAGACYN 183
                         R S   GGGGG   CF CGE GH+AR+C +G  G  GGGG G    
Sbjct: 133 --------------RGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRY-- 192

Query: 184 CGGFGHLARDCNRGGAGGGSGGGGGGGGGG--CFNCGEYGHIARDC 228
                             GSGGGGGGGGGG  C++CGE GH ARDC
Sbjct: 193 ------------------GSGGGGGGGGGGLSCYSCGESGHFARDC 195

[Close]
BLAST of Lsi07G011020 vs. TrEMBL
Match: A0A0A0L4X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002765 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.2e-134
Identity = 264/274 (96.35%), Postives = 264/274 (96.35%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
           DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120

Query: 121 GGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS---GGGGGGG 180
           GGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRGNS   GGGGGGG
Sbjct: 121 GGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGG 180

Query: 181 AGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGS-GG 240
            GACYNCGGFGHLARDCNRGGAGGGS  GGGGGGGGCFNCGEYGHIARDCQNESRGS GG
Sbjct: 181 GGACYNCGGFGHLARDCNRGGAGGGS--GGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240

Query: 241 GGGRF--GGGGGGGSNTCFNCGKSGHFARECPDA 269
           GGGRF  GGGGGGGSNTCFNCGKSGHFARECPDA
Sbjct: 241 GGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDA 272

[Close]
BLAST of Lsi07G011020 vs. TrEMBL
Match: E5RDD6_CUCME (Cold-shock DNA-binding family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 6.1e-134
Identity = 262/274 (95.62%), Postives = 263/274 (95.99%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNF---GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNF   GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 AGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
            GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GA--GACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGS 240
           G+  GACYNCGGFGHLARDCNRGGAGGGS   GGGGGGGCFNCGEYGHIARDCQNESRGS
Sbjct: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGS---GGGGGGGCFNCGEYGHIARDCQNESRGS 240

Query: 241 GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
           GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA
Sbjct: 241 GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 271

[Close]
BLAST of Lsi07G011020 vs. TrEMBL
Match: W9SMZ6_9ROSA (Glycine-rich protein 2 OS=Morus notabilis GN=L484_026671 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.0e-77
Identity = 178/280 (63.57%), Postives = 195/280 (69.64%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEER TG V+WFNDSKGFGFI PD  G DLFVHQSSIKSDG+RSL  GD VEFQIA  D
Sbjct: 1   MAEERSTGKVRWFNDSKGFGFITPDDGGEDLFVHQSSIKSDGFRSLAEGDTVEFQIAIAD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
           DGK+KA++V    GSS       GGG GG  G GG GGGG+G GGWRGGDRRNG    GG
Sbjct: 61  DGKTKAVDVTGPGGSSLQGTKKGGGGRGGGFGGGGFGGGGFG-GGWRGGDRRNGG---GG 120

Query: 121 GGCYQCGEQGHLARDCTRASNR------GGGGGGGGGCFTCGEVGHLARDCPR------G 180
            GC+ CG+ GHLARDC R          GGGGGGGGGCF+CGE GH+AR+CPR      G
Sbjct: 121 SGCFNCGDPGHLARDCDRDRGNNGNFGGGGGGGGGGGCFSCGEFGHMARNCPRASGGAGG 180

Query: 181 NSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQ 240
             GGGGGGG G CY CG FGHLARDCNR        GGGGGG GGC+NCGE+GH+AR+C 
Sbjct: 181 GVGGGGGGGGGGCYKCGEFGHLARDCNR--------GGGGGGSGGCYNCGEFGHMARECS 240

Query: 241 NESRGSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
             S GSGGGG           N+C+NCG  GHFARECPDA
Sbjct: 241 KASGGSGGGG-----------NSCYNCGNPGHFARECPDA 257

[Close]
BLAST of Lsi07G011020 vs. TrEMBL
Match: V7CFP6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G263300g PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-70
Identity = 167/268 (62.31%), Postives = 188/268 (70.15%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEER TGVVQWFN+ KGFGFIKPD  G DLFVHQSSI+SDGYR+L+ GD VEF IA GD
Sbjct: 1   MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
           + K+KAI+V  +DG+    R              G  G GYGF     G RRNG +GAGG
Sbjct: 61  NDKTKAIDVTGIDGAPLQPR-----------AAAGNRGSGYGF-----GPRRNG-AGAGG 120

Query: 121 GGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAGA 180
             CYQCG+ GHLARDC R++N   GGGGGGGCF CG  GHLARDC RG + GGGGGG+G+
Sbjct: 121 AACYQCGDFGHLARDCNRSTN--SGGGGGGGCFVCGGFGHLARDCARGGNIGGGGGGSGS 180

Query: 181 CYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGR 240
           C+ CGGFGH+ARDC         G GGGG GGGCF CGE GH+ARDC  E  G  GGG  
Sbjct: 181 CFRCGGFGHMARDC---ATAKSVGVGGGGSGGGCFRCGEVGHLARDCGIEG-GRFGGGNS 240

Query: 241 FGGGGGGGSNTCFNCGKSGHFARECPDA 269
            GGGGG G +TCFNCGK GHFAREC +A
Sbjct: 241 GGGGGGAGKSTCFNCGKPGHFARECVEA 245

[Close]
BLAST of Lsi07G011020 vs. TrEMBL
Match: A0A0S3R460_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G322400 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 6.9e-69
Identity = 166/273 (60.81%), Postives = 186/273 (68.13%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEER TGVVQWFN+ KGFGFIKPD  G DLFVHQSSI+SDGYR+L+ GD VEF IA GD
Sbjct: 1   MAEERFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIATGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
           + K+KA++V  +DG+    R              G  G GYGFG      RRNG +GAGG
Sbjct: 61  NDKTKAVDVTGIDGAPLQPR-----------AASGNRGSGYGFGS-----RRNG-AGAGG 120

Query: 121 GGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAG- 180
             CYQCG+ GHLARDC R+SN     GGGGGCF CG  GHLARDC RG +GGGGGGG G 
Sbjct: 121 AACYQCGDFGHLARDCNRSSN----SGGGGGCFVCGGFGHLARDCVRGGNGGGGGGGGGG 180

Query: 181 ----ACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGSG 240
               +C+ CGGFGH+ARDC    A   S GGGGG GGGCF CGE GH+ARDC  E    G
Sbjct: 181 GGGGSCFRCGGFGHMARDC----ATAKSVGGGGGSGGGCFRCGEVGHLARDCGIEGGRYG 240

Query: 241 GGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
           GG    GG GG G +TCFNCGK GHFAREC +A
Sbjct: 241 GGNSGGGGAGGAGKSTCFNCGKPGHFARECVEA 248

[Close]
BLAST of Lsi07G011020 vs. TAIR10
Match: AT2G17870.1 (AT2G17870.1 cold shock domain protein 3)

HSP 1 Score: 211.8 bits (538), Expect = 5.1e-55
Identity = 158/300 (52.67%), Postives = 183/300 (61.00%), Query Frame = 1 

Query: 5   RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
           R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+
Sbjct: 10  RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69

Query: 65  KAIEVVALDGSSGNRRDNFGGGGGGRGGRGG----------GGGGGYGFGGWRGGDRRNG 124
           KAIEV A  G S N+++N   G GG     G          GG GG  FGG  GG RR+G
Sbjct: 70  KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGG--GGGRRSG 129

Query: 125 NSGAGGGGCYQCGEQGHLARDCTRAS--NRGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 184
               G G CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC RG SGG
Sbjct: 130 ----GEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC-RGGSGG 189

Query: 185 ---GGGGGAGA----CYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIAR 244
              GGGGG G+    CY CGG GH ARDC + G     GG  GGGG  C+ CG  GHIA+
Sbjct: 190 NRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG-----GGNVGGGGSTCYTCGGVGHIAK 249

Query: 245 DCQNESRGSGGGGGR----FGG----------------GGGGGSNTCFNCGKSGHFAREC 266
            C ++    GGGGGR     GG                GGGGGSN CF CGK GHFAREC
Sbjct: 250 VCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFAREC 297

[Close]
BLAST of Lsi07G011020 vs. TAIR10
Match: AT4G36020.1 (AT4G36020.1 cold shock domain protein 1)

HSP 1 Score: 190.7 bits (483), Expect = 1.2e-48
Identity = 148/290 (51.03%), Postives = 168/290 (57.93%), Query Frame = 1 

Query: 5   RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
           R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+
Sbjct: 10  RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69

Query: 65  KAIEVVALDGSSGNRRDNFGGGGGGRGGRGGG----GGGGY-----GFGGWRGGDRRNGN 124
           KA+ V A  G S  + +N  G G  RGG G G    G  G+     G GG  GG  R   
Sbjct: 70  KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129

Query: 125 SGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPR----- 184
              GG GCY CG+ GH ARDCT A N   RG   GG  GC+TCG+VGH+ARDC +     
Sbjct: 130 ---GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGN 189

Query: 185 GNSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDC 244
           G+  G   GG   CY CG  GH ARDC +  A  G+   GGGG G C++CG  GHIARDC
Sbjct: 190 GDQRGAVKGGNDGCYTCGDVGHFARDCTQKVA-AGNVRSGGGGSGTCYSCGGVGHIARDC 249

Query: 245 ---QNESRG--SGGGGGRF-------GGGGGGGSNTCFNCGKSGHFAREC 266
              +  SRG    GG G         G GGGG  N C+ CGK GHFAREC
Sbjct: 250 ATKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295

[Close]
BLAST of Lsi07G011020 vs. TAIR10
Match: AT4G38680.1 (AT4G38680.1 glycine rich protein 2)

HSP 1 Score: 141.7 bits (356), Expect = 6.4e-34
Identity = 102/201 (50.75%), Postives = 123/201 (61.19%), Query Frame = 1 

Query: 4   ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
           ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ +
Sbjct: 9   ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68

Query: 64  SKAIEVVALDGS--SGNRRDNFGGGGGG-RGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 123
            KAI+V   DG+   GN      GG GG  GGRGGG G G G+GG  GG    G  G GG
Sbjct: 69  PKAIDVSGPDGAPVQGNSGGGSSGGRGGFGGGRGGGRGSGGGYGGGGGGYGGRGGGGRGG 128

Query: 124 GGCYQCGEQGHLARDCTRASNRGGGGGGG---GGCFTCGEVGHLARDCPRGNSGGGGGGG 183
             CY+CGE GH+ARDC+      GGGGGG   GG +  G  G+       G  G GGGGG
Sbjct: 129 SDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGGGYGGGGGGY-------GGGGRGGGGG 188

Query: 184 AGACYNCGGFGHLARDCNRGG 199
            G+CY+CG  GH ARDC  GG
Sbjct: 189 GGSCYSCGESGHFARDCTSGG 202

[Close]
BLAST of Lsi07G011020 vs. TAIR10
Match: AT2G21060.1 (AT2G21060.1 glycine-rich protein 2B)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-33
Identity = 105/226 (46.46%), Postives = 122/226 (53.98%), Query Frame = 1 

Query: 4   ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
           +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 64  SKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGGGGC 123
            KAIEV   DG+        GG  GGRGG GGGGG        RGG R  G+ G G GG 
Sbjct: 73  PKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGG--------RGGGRGGGSYGGGYGG- 132

Query: 124 YQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGAGACYN 183
                         R S   GGGGG   CF CGE GH+AR+C +G  G  GGGG G    
Sbjct: 133 --------------RGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRY-- 192

Query: 184 CGGFGHLARDCNRGGAGGGSGGGGGGGGGG--CFNCGEYGHIARDC 228
                             GSGGGGGGGGGG  C++CGE GH ARDC
Sbjct: 193 ------------------GSGGGGGGGGGGLSCYSCGESGHFARDC 195

[Close]
BLAST of Lsi07G011020 vs. NCBI nr
Match: gi|449456813|ref|XP_004146143.1| (PREDICTED: cold shock domain-containing protein 3-like [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 1.8e-134
Identity = 264/274 (96.35%), Postives = 264/274 (96.35%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
           DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120

Query: 121 GGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGNS---GGGGGGG 180
           GGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRGNS   GGGGGGG
Sbjct: 121 GGCYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGG 180

Query: 181 AGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGS-GG 240
            GACYNCGGFGHLARDCNRGGAGGGS  GGGGGGGGCFNCGEYGHIARDCQNESRGS GG
Sbjct: 181 GGACYNCGGFGHLARDCNRGGAGGGS--GGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240

Query: 241 GGGRF--GGGGGGGSNTCFNCGKSGHFARECPDA 269
           GGGRF  GGGGGGGSNTCFNCGKSGHFARECPDA
Sbjct: 241 GGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDA 272

[Close]
BLAST of Lsi07G011020 vs. NCBI nr
Match: gi|659095380|ref|XP_008448549.1| (PREDICTED: cold shock domain-containing protein 3 [Cucumis melo])

HSP 1 Score: 485.0 bits (1247), Expect = 8.8e-134
Identity = 262/274 (95.62%), Postives = 263/274 (95.99%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNF---GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNF   GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 AGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
            GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GA--GACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGS 240
           G+  GACYNCGGFGHLARDCNRGGAGGGS   GGGGGGGCFNCGEYGHIARDCQNESRGS
Sbjct: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGS---GGGGGGGCFNCGEYGHIARDCQNESRGS 240

Query: 241 GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
           GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA
Sbjct: 241 GGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 271

[Close]
BLAST of Lsi07G011020 vs. NCBI nr
Match: gi|1009144179|ref|XP_015889657.1| (PREDICTED: cold shock protein 2 [Ziziphus jujuba])

HSP 1 Score: 334.3 bits (856), Expect = 1.9e-88
Identity = 196/273 (71.79%), Postives = 218/273 (79.85%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           M+EER TG V+WFNDSKGFGFIKPD  G DLFVHQSSIKSDG+RSL  G+ VEFQIA  D
Sbjct: 1   MSEERSTGKVRWFNDSKGFGFIKPDDGGEDLFVHQSSIKSDGFRSLAEGESVEFQIALTD 60

Query: 61  DGKSKAIEVVALDGSS--GNRRDNFGGGGGGRGGRGGGGGGGYGFG-GWRGGDRRNGNSG 120
           DGK+KAI+V   DGSS  GNR+D++GGG   RGGRGGGGGGGYGFG GWRG DRRNG  G
Sbjct: 61  DGKTKAIDVTGPDGSSVQGNRKDSYGGG---RGGRGGGGGGGYGFGGGWRGSDRRNG-GG 120

Query: 121 AGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGG-CFTCGEVGHLARDCPRGNSGGGGGG 180
           AGG GCY CG+ GHLARDC+R +  GGGGGGGGG CFTCG  GHLARDC +GNSGGGGG 
Sbjct: 121 AGGAGCYNCGDPGHLARDCSRGNTGGGGGGGGGGSCFTCGGYGHLARDCLQGNSGGGGGA 180

Query: 181 GAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNESRGSGG 240
           G G CY CG +GH+ARDC+RGG+GGG+   GG  GG CFNCGE+GH+ARDC    R SGG
Sbjct: 181 GGGGCYKCGEYGHMARDCSRGGSGGGA---GGPPGGACFNCGEFGHLARDC---GRPSGG 240

Query: 241 GGGRFGGGGGGGSNTCFNCGKSGHFARECPDAP 270
           GGGRFGG GG  S  C+NCGK GHFARECP+ P
Sbjct: 241 GGGRFGGSGGDAS--CYNCGKPGHFARECPNVP 261

[Close]
BLAST of Lsi07G011020 vs. NCBI nr
Match: gi|703163431|ref|XP_010113340.1| (Glycine-rich protein 2 [Morus notabilis])

HSP 1 Score: 296.2 bits (757), Expect = 5.8e-77
Identity = 178/280 (63.57%), Postives = 195/280 (69.64%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEER TG V+WFNDSKGFGFI PD  G DLFVHQSSIKSDG+RSL  GD VEFQIA  D
Sbjct: 1   MAEERSTGKVRWFNDSKGFGFITPDDGGEDLFVHQSSIKSDGFRSLAEGDTVEFQIAIAD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAGG 120
           DGK+KA++V    GSS       GGG GG  G GG GGGG+G GGWRGGDRRNG    GG
Sbjct: 61  DGKTKAVDVTGPGGSSLQGTKKGGGGRGGGFGGGGFGGGGFG-GGWRGGDRRNGG---GG 120

Query: 121 GGCYQCGEQGHLARDCTRASNR------GGGGGGGGGCFTCGEVGHLARDCPR------G 180
            GC+ CG+ GHLARDC R          GGGGGGGGGCF+CGE GH+AR+CPR      G
Sbjct: 121 SGCFNCGDPGHLARDCDRDRGNNGNFGGGGGGGGGGGCFSCGEFGHMARNCPRASGGAGG 180

Query: 181 NSGGGGGGGAGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQ 240
             GGGGGGG G CY CG FGHLARDCNR        GGGGGG GGC+NCGE+GH+AR+C 
Sbjct: 181 GVGGGGGGGGGGCYKCGEFGHLARDCNR--------GGGGGGSGGCYNCGEFGHMARECS 240

Query: 241 NESRGSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
             S GSGGGG           N+C+NCG  GHFARECPDA
Sbjct: 241 KASGGSGGGG-----------NSCYNCGNPGHFARECPDA 257

[Close]
BLAST of Lsi07G011020 vs. NCBI nr
Match: gi|502153508|ref|XP_004509364.1| (PREDICTED: cold shock domain-containing protein 3 [Cicer arietinum])

HSP 1 Score: 290.8 bits (743), Expect = 2.4e-75
Identity = 170/276 (61.59%), Postives = 200/276 (72.46%), Query Frame = 1 

Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEER TGVVQWFN+ KGFGFIKPD  G DLFVHQSSI+SDG+R+L+ GD+VEF IA GD
Sbjct: 1   MAEERFTGVVQWFNNVKGFGFIKPDDGGEDLFVHQSSIRSDGFRTLLDGDNVEFAIATGD 60

Query: 61  DGKSKAIEVVALDGSS-GNRRDNFGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGAG 120
           + K+KA++V  L+G+   +R+DN+GGGGGGRG         +G GG+RG DRRNG +GAG
Sbjct: 61  NDKTKAVDVTGLNGAPLQSRQDNYGGGGGGRG---------FG-GGFRGNDRRNGGAGAG 120

Query: 121 GGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPR-GNSGGGGGGGA 180
           G GCY CG+ GH+AR+C R++N GGGGGGGG C+TCG  GH+ARDC R GN+GGG GGG 
Sbjct: 121 GAGCYNCGDTGHIARECNRSNNSGGGGGGGGACYTCGAFGHIARDCMRGGNNGGGIGGGI 180

Query: 181 G--ACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGGGCFNCGEYGHIARDCQNE----SR 240
           G  +CY CGG GH+ARDC             G GGGGC+ CGE GHIARDC  E      
Sbjct: 181 GGTSCYRCGGIGHIARDCATARV--------GSGGGGCYKCGEVGHIARDCSIEGGRFEG 240

Query: 241 GSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDA 269
           G  GG    GGGG GG NTCFNCGK GHFAREC +A
Sbjct: 241 GRFGGNNNSGGGGNGGKNTCFNCGKPGHFARECVEA 258

The following BLAST results are available for this feature:
BLAST of Lsi07G011020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CSP3_ARATH9.0e-5452.67Cold shock domain-containing protein 3 OS=Arabidopsis thaliana GN=CSP3 PE=1 SV=1[more]
CSP1_ARATH2.1e-4751.03Cold shock protein 1 OS=Arabidopsis thaliana GN=CSP1 PE=1 SV=1[more]
GRP2_NICSY3.1e-3851.24Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1[more]
CSP2_ARATH1.1e-3250.75Cold shock protein 2 OS=Arabidopsis thaliana GN=CSP2 PE=1 SV=1[more]
CSP4_ARATH7.4e-3246.46Cold shock domain-containing protein 4 OS=Arabidopsis thaliana GN=CSP4 PE=1 SV=1[more]
BLAST of Lsi07G011020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4X7_CUCSA1.2e-13496.35Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002765 PE=4 SV=1[more]
E5RDD6_CUCME6.1e-13495.62Cold-shock DNA-binding family protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
W9SMZ6_9ROSA4.0e-7763.57Glycine-rich protein 2 OS=Morus notabilis GN=L484_026671 PE=4 SV=1[more]
V7CFP6_PHAVU2.1e-7062.31Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G263300g PE=4 SV=1[more]
A0A0S3R460_PHAAN6.9e-6960.81Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G322400 PE=... [more]
BLAST of Lsi07G011020 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17870.15.1e-5552.67 cold shock domain protein 3[more]
AT4G36020.11.2e-4851.03 cold shock domain protein 1[more]
AT4G38680.16.4e-3450.75 glycine rich protein 2[more]
AT2G21060.14.2e-3346.46 glycine-rich protein 2B[more]
BLAST of Lsi07G011020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456813|ref|XP_004146143.1|1.8e-13496.35PREDICTED: cold shock domain-containing protein 3-like [Cucumis sativus][more]
gi|659095380|ref|XP_008448549.1|8.8e-13495.62PREDICTED: cold shock domain-containing protein 3 [Cucumis melo][more]
gi|1009144179|ref|XP_015889657.1|1.9e-8871.79PREDICTED: cold shock protein 2 [Ziziphus jujuba][more]
gi|703163431|ref|XP_010113340.1|5.8e-7763.57Glycine-rich protein 2 [Morus notabilis][more]
gi|502153508|ref|XP_004509364.1|2.4e-7561.59PREDICTED: cold shock domain-containing protein 3 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR019844Cold-shock_CS
IPR012340NA-bd_OB-fold
IPR011129CSD
IPR002059CSP_DNA-bd
IPR001878Znf_CCHC
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G011020.1Lsi07G011020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 188..222
score: 4.0E-14coord: 223..267
score: 1.0E-14coord: 160..187
score: 1.4E-13coord: 123..159
score: 3.6
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 213..228
score: 3.8E-7coord: 151..166
score: 8.4E-8coord: 122..137
score: 2.9E-6coord: 180..194
score: 3.7E-6coord: 250..266
score: 4.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 151..167
score: 2.6E-5coord: 213..229
score: 2.5E-5coord: 122..138
score: 2.9E-4coord: 251..267
score: 5.9E-6coord: 180..196
score: 4.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 123..138
score: 11.004coord: 214..229
score: 10.938coord: 181..194
score: 10.477coord: 252..267
score: 11.433coord: 152..167
score: 11
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 113..169
score: 3.4E-11coord: 233..267
score: 8.37E-9coord: 172..230
score: 3.27
IPR002059Cold-shock protein, DNA-bindingPRINTSPR00050COLDSHOCKcoord: 29..38
score: 6.8E-12coord: 8..23
score: 6.8E-12coord: 44..62
score: 6.8
IPR002059Cold-shock protein, DNA-bindingPFAMPF00313CSDcoord: 7..70
score: 1.0
IPR011129Cold shock proteinSMARTSM00357csp_8coord: 7..72
score: 1.5
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 7..70
score: 1.8
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 4..74
score: 1.91
IPR019844Cold-shock conserved sitePROSITEPS00352COLD_SHOCKcoord: 19..38
scor
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 237..255
score: 9.6E-7coord: 87..98
score: 9.6E-7coord: 199..209
score: 9.6E-7coord: 168..183
score: 9.
NoneNo IPR availablePANTHERPTHR11544COLD SHOCK DOMAIN CONTAINING PROTEINScoord: 139..268
score: 2.3E-90coord: 1..116
score: 2.3