Lsi07G008610 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G008610
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	60S ribosomal L10
Location	chr07 : 9749240 .. 9750575 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATTGAAGCAGGTACTTATGATAATCGGGCATATCTTACTGTTCTCCTGGCGCGGCTAATTGTAGTTGTGCCGAGTTTCAAGGATATGACTGTATGATTTACAATACTGCTGTCTGATTCATTCTCTGTTCATTATATCTTATGTTTAATGGCCAAGAAACTGACCTGCCCTTTTCTGTACAAGTCCTATTGGTTAATAACTTCAATGACCAAACTATAAGTGGTGGCTCACCTGTTGAATGTTTAATAGATTTTAAGTTACATCCAGATTTAAATCTCTCAAGCTGAATCTTGTGTTCATCTATTGTCTAAGTAATGAGGTCATACTGGCAGCATTTTGATGTCACAGGAAAAGGGAAATAGGATAGGTTTTGAGAATAGGGAGAGGGATAGTCGTGAGATTTGGGAGCAATTTCAATTAATCATCTAGTTTTGGGCTTTTTCCAGTTAACTTTTAGGTGACATTGTTATATTTTTTTCTACAATGATGCAGGTCAAGTTCATTACACTCGCAATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAACCATACCCTAAGTCACGATTTTGTCGCGGTGTCCCCGATCCTAAGATCAGGATCTACGATGTTGGGATGAAGAAGAAAGGAGTTGATGAATTTCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAATAAGTATATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTTCGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGAAAACCACAAGGAACCTGTGCGAGGGTGGACATTGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGACAGAATGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAGTTTCCCGGTCGTCAGAAGATCATTGTTAGCAGGAAGTGGGGCTTCACCAAATTCAGCCGAGCTGATTATCTCAAGTACAAAGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAATTGCCTAGACTCATTTACTTGTGTTTTCTTGTTCAATTTATTTGGAATCATTGTTGACATTATTACCACATTGTTTGTTTGAACTTCTGTGAAACAAACAAAGCTTCCTCTGTTTTATCTTTTATCCTAGTAAATTTAAATCTTCTTTTGAAACTTCTCCAA

mRNA sequence

ATGATGATTGAAGCAGGTACTTATGATAATCGGGCATATCTTACTGTTCTCCTGGCGCGGCTAATTGTAGTTGTGCCGAGTTTCAAGGATATGACTGTCAAGTTCATTACACTCGCAATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAACCATACCCTAAGTCACGATTTTGTCGCGGTGTCCCCGATCCTAAGATCAGGATCTACGATGTTGGGATGAAGAAGAAAGGAGTTGATGAATTTCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAATAAGTATATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTTCGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGAAAACCACAAGGAACCTGTGCGAGGGTGGACATTGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGACAGAATGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAGTTTCCCGGTCGTCAGAAGATCATTGTTAGCAGGAAGTGGGGCTTCACCAAATTCAGCCGAGCTGATTATCTCAAGTACAAAGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAATTGCCTAGACTCATTTACTTGTGTTTTCTTGTTCAATTTATTTGGAATCATTGTTGACATTATTACCACATTGTTTGTTTGAACTTCTGTGAAACAAACAAAGCTTCCTCTGTTTTATCTTTTATCCTAGTAAATTTAAATCTTCTTTTGAAACTTCTCCAA

Coding sequence (CDS)

ATGATGATTGAAGCAGGTACTTATGATAATCGGGCATATCTTACTGTTCTCCTGGCGCGGCTAATTGTAGTTGTGCCGAGTTTCAAGGATATGACTGTCAAGTTCATTACACTCGCAATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAAAACAAACCATACCCTAAGTCACGATTTTGTCGCGGTGTCCCCGATCCTAAGATCAGGATCTACGATGTTGGGATGAAGAAGAAAGGAGTTGATGAATTTCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAGGCTTTGGAAGCAGCTAGGATTGCCTGCAATAAGTATATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTTCGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGTATGAGAGGTGCATTTGGAAAACCACAAGGAACCTGTGCGAGGGTGGACATTGGTCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGACAGAATGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAGTTTCCCGGTCGTCAGAAGATCATTGTTAGCAGGAAGTGGGGCTTCACCAAATTCAGCCGAGCTGATTATCTCAAGTACAAAGCAGAGAACAAGATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGGCCTCTTGCAAACCGTCAGCCTGGAAGAGCTTTTCTATCTCAAATTGCCTAG

Protein sequence

MMIEAGTYDNRAYLTVLLARLIVVVPSFKDMTVKFITLAMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQIA

Homology

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BLAST of Lsi07G008610 vs. Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.0e-119
Identity = 203/220 (92.27%), Postives = 210/220 (95.45%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQG CARV IGQVLLSVRCKDNN  NAQEALRRAKFKFPGRQKIIVSRKWGFTK +RAD
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQIA 260
           Y + K+EN+ILPDGVNAKLLGCHG LANR+PGRAF+  +A
Sbjct: 181 YPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDAVA 220

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BLAST of Lsi07G008610 vs. Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.4e-119
Identity = 199/217 (91.71%), Postives = 211/217 (97.24%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARV IGQVLLSVRCKD N  +AQEALRRAKFKFP RQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 257
           Y+K+K++N+ILPDGVNAKLLGCHGPLANRQPG+AF++
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFIN 217

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BLAST of Lsi07G008610 vs. Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 2.9e-118
Identity = 203/217 (93.55%), Postives = 208/217 (95.85%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQG CARV IGQVLLSVRCKD N  +AQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 257
           YLKYK+EN+I+PDGVNAKLLG HGPLA RQPGRAFLS
Sbjct: 181 YLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFLS 217

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BLAST of Lsi07G008610 vs. Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 8.2e-113
Identity = 193/220 (87.73%), Postives = 203/220 (92.27%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKP PKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWE+ENV
Sbjct: 1   MGRRPARCYRQIKNKPCPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWERENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARI CNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIVCNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARVDIGQVLLSVRCKDNN  +A EALRRAKFKFP RQKII SRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQIA 260
           YLKYK+E +I+PDGVNAKLL  HG L  R PG+AFL  +A
Sbjct: 181 YLKYKSEGRIVPDGVNAKLLANHGRLEKRAPGKAFLDAVA 220

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BLAST of Lsi07G008610 vs. Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2)

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-112
Identity = 192/217 (88.48%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           K  GTCARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 257
           Y K + E +I+PDGVNAK L CHGPLANRQPG AFLS
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLS 217

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BLAST of Lsi07G008610 vs. TrEMBL
Match: A0A0A0LN38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336100 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.2e-121
Identity = 210/218 (96.33%), Postives = 215/218 (98.62%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARV IGQVLLSVRCKD+N Q+AQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ 258
           YLK+K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLSQ
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLSQ 218

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BLAST of Lsi07G008610 vs. TrEMBL
Match: V7ARW6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G042100g PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 7.5e-121
Identity = 208/217 (95.85%), Postives = 214/217 (98.62%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARV IGQVLLSVRCKD+N  NAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR+D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRSD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 257
           YLK+K+EN+I+PDGVNAKLLGCHGPLANRQPGRAFLS
Sbjct: 181 YLKFKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLS 217

[Close]

BLAST of Lsi07G008610 vs. TrEMBL
Match: A0A0B0NJ94_GOSAR (60S ribosomal L10 OS=Gossypium arboreum GN=F383_19333 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 8.2e-120
Identity = 205/217 (94.47%), Postives = 214/217 (98.62%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARVDIGQVLLSVRCKD+N  +AQEALRRAKFKFPGRQKIIVSRKWGFTK++RAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKYNRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 257
           YLK+K+EN+I+PDGVNAKLLGCHGPLANRQPGRAFLS
Sbjct: 181 YLKWKSENRIMPDGVNAKLLGCHGPLANRQPGRAFLS 217

[Close]

BLAST of Lsi07G008610 vs. TrEMBL
Match: F6HJ95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0150g00580 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 8.2e-120
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 47  MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 106

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 107 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 166

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARV+IGQVLLSVRCKD NG +AQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 167 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 226

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 257
           Y+K+K EN+I+PDGVNAKLLGCHGPLA RQPGRAFLS
Sbjct: 227 YVKWKQENRIMPDGVNAKLLGCHGPLAQRQPGRAFLS 263

[Close]

BLAST of Lsi07G008610 vs. TrEMBL
Match: I3SEG3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-119
Identity = 206/216 (95.37%), Postives = 211/216 (97.69%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARV IGQVLLSVRCKD+N  +AQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 256
           YLKYK+EN+ILPDGVNAKLLGCHGPLANRQPGRAF+
Sbjct: 181 YLKYKSENRILPDGVNAKLLGCHGPLANRQPGRAFI 216

[Close]

BLAST of Lsi07G008610 vs. TAIR10
Match: AT1G26910.1 (AT1G26910.1 Ribosomal protein L16p/L10e family protein)

HSP 1 Score: 407.5 bits (1046), Expect = 6.0e-114
Identity = 192/217 (88.48%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           K  GTCARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 257
           Y K + E +I+PDGVNAK L CHGPLANRQPG AFLS
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLS 217

[Close]

BLAST of Lsi07G008610 vs. TAIR10
Match: AT1G14320.1 (AT1G14320.1 Ribosomal protein L16p/L10e family protein)

HSP 1 Score: 405.2 bits (1040), Expect = 3.0e-113
Identity = 190/216 (87.96%), Postives = 201/216 (93.06%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           K  GTCARV IGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 256
           + K + E +++PDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]

BLAST of Lsi07G008610 vs. TAIR10
Match: AT1G66580.1 (AT1G66580.1 senescence associated gene 24)

HSP 1 Score: 403.3 bits (1035), Expect = 1.1e-112
Identity = 191/217 (88.02%), Postives = 202/217 (93.09%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           K  GTCARV IGQVLLSVRCKDN+G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 257
           Y K +A  +I+PDGVNAK L  HGPLANRQPG AF+S
Sbjct: 181 YTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFIS 217

[Close]

BLAST of Lsi07G008610 vs. NCBI nr
Match: gi|659101772|ref|XP_008451785.1| (PREDICTED: 60S ribosomal protein L10-like [Cucumis melo])

HSP 1 Score: 459.9 bits (1182), Expect = 2.9e-126
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQIA 260
           YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ A
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Lsi07G008610 vs. NCBI nr
Match: gi|449438947|ref|XP_004137249.1| (PREDICTED: 60S ribosomal protein L10-like [Cucumis sativus])

HSP 1 Score: 458.0 bits (1177), Expect = 1.1e-125
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQIA 260
           YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ A
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQNA 220

[Close]

BLAST of Lsi07G008610 vs. NCBI nr
Match: gi|659119109|ref|XP_008459481.1| (PREDICTED: 60S ribosomal protein L10-like [Cucumis melo])

HSP 1 Score: 446.0 bits (1146), Expect = 4.3e-122
Identity = 213/221 (96.38%), Postives = 215/221 (97.29%), Query Frame = 1


Query: 39  AMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 98
           AMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN
Sbjct: 25  AMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKEN 84

Query: 99  VSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 158
           VSSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF
Sbjct: 85  VSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 144

Query: 159 GKPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 218
           GKPQGTCARV IGQVLLSVRCKD+N Q+AQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA
Sbjct: 145 GKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRA 204

Query: 219 DYLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQIA 260
           DYL YKAENKILPDGVNAKLLGCHGPLANRQPGRAFL Q A
Sbjct: 205 DYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 245

[Close]

BLAST of Lsi07G008610 vs. NCBI nr
Match: gi|1009121729|ref|XP_015877617.1| (PREDICTED: 60S ribosomal protein L10-like [Ziziphus jujuba])

HSP 1 Score: 445.3 bits (1144), Expect = 7.4e-122
Identity = 210/220 (95.45%), Postives = 216/220 (98.18%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARV IGQVLLSVRCKD+N  +AQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDSNSAHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQIA 260
           YLKYK+ENKILPDGVNAKLLGCHGPLANRQPGRAFLS++A
Sbjct: 181 YLKYKSENKILPDGVNAKLLGCHGPLANRQPGRAFLSEVA 220

[Close]

BLAST of Lsi07G008610 vs. NCBI nr
Match: gi|449447509|ref|XP_004141510.1| (PREDICTED: 60S ribosomal protein L10-like [Cucumis sativus])

HSP 1 Score: 445.3 bits (1144), Expect = 7.4e-122
Identity = 212/218 (97.25%), Postives = 214/218 (98.17%), Query Frame = 1


Query: 40  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 99
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 100 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 159
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 160 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 219
           KPQGTCARV IGQVLLSVRCKD+N Q+AQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 220 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ 258
           YL YKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ
Sbjct: 181 YLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ 218

The following BLAST results are available for this feature:

BLAST of Lsi07G008610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL10_EUPES	2.0e-119	92.27	60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1	[more]
RL10_VITRI	3.4e-119	91.71	60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1	[more]
RL10_SOLME	2.9e-118	93.55	60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1	[more]
RL10_MAIZE	8.2e-113	87.73	60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1	[more]
RL102_ARATH	1.1e-112	88.48	60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2	[more]

BLAST of Lsi07G008610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN38_CUCSA	1.2e-121	96.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336100 PE=4 SV=1	[more]
V7ARW6_PHAVU	7.5e-121	95.85	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G042100g PE=4 SV=1	[more]
A0A0B0NJ94_GOSAR	8.2e-120	94.47	60S ribosomal L10 OS=Gossypium arboreum GN=F383_19333 PE=4 SV=1	[more]
F6HJ95_VITVI	8.2e-120	94.93	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0150g00580 PE=4 SV=...	[more]
I3SEG3_LOTJA	1.4e-119	95.37	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of Lsi07G008610 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G26910.1	6.0e-114	88.48	Ribosomal protein L16p/L10e family protein	[more]
AT1G14320.1	3.0e-113	87.96	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	1.1e-112	88.02	senescence associated gene 24	[more]

BLAST of Lsi07G008610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101772\|ref\|XP_008451785.1\|	2.9e-126	99.55	PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]	[more]
gi\|449438947\|ref\|XP_004137249.1\|	1.1e-125	99.09	PREDICTED: 60S ribosomal protein L10-like [Cucumis sativus]	[more]
gi\|659119109\|ref\|XP_008459481.1\|	4.3e-122	96.38	PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]	[more]
gi\|1009121729\|ref\|XP_015877617.1\|	7.4e-122	95.45	PREDICTED: 60S ribosomal protein L10-like [Ziziphus jujuba]	[more]
gi\|449447509\|ref\|XP_004141510.1\|	7.4e-122	97.25	PREDICTED: 60S ribosomal protein L10-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR018255	Ribosomal_L10e_CS
IPR016180	Ribosomal_L10e/L16
IPR001197	Ribosomal_L10e

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G008610.1	Lsi07G008610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001197	Ribosomal protein L10e	TIGRFAMs	TIGR00279	TIGR00279	coord: 40..213 score: 1.2
IPR016180	Ribosomal protein L10e/L16	GENE3D	G3DSA:3.90.1170.10		coord: 43..212 score: 2.7
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 51..205 score: 3.3
IPR016180	Ribosomal protein L10e/L16	unknown	SSF54686	Ribosomal protein L16p/L10e	coord: 43..212 score: 2.09
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 147..168 scor
None	No IPR available	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 41..255 score: 8.5E
None	No IPR available	PANTHER	PTHR11726:SF15	SUBFAMILY NOT NAMED	coord: 41..255 score: 8.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G008610	CmaCh04G006510	Cucurbita maxima (Rimu)	cmalsiB695
Lsi07G008610	CmoCh16G004870	Cucurbita moschata (Rifu)	cmolsiB314
Lsi07G008610	CmoCh04G007000	Cucurbita moschata (Rifu)	cmolsiB689
Lsi07G008610	Cp4.1LG01g00780	Cucurbita pepo (Zucchini)	cpelsiB372

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G008610	Cucurbita pepo (Zucchini)	cpelsiB184
Lsi07G008610	Wild cucumber (PI 183967)	cpilsiB304
Lsi07G008610	Wild cucumber (PI 183967)	cpilsiB314
Lsi07G008610	Cucumber (Chinese Long) v2	culsiB304
Lsi07G008610	Cucumber (Chinese Long) v2	culsiB314
Lsi07G008610	Melon (DHL92) v3.5.1	lsimeB455
Lsi07G008610	Watermelon (Charleston Gray)	lsiwcgB412
Lsi07G008610	Watermelon (97103) v1	lsiwmB440
Lsi07G008610	Cucumber (Gy14) v2	cgyblsiB278
Lsi07G008610	Cucumber (Gy14) v2	cgyblsiB288
Lsi07G008610	Melon (DHL92) v3.6.1	lsimedB472
Lsi07G008610	Silver-seed gourd	carlsiB043
Lsi07G008610	Silver-seed gourd	carlsiB596
Lsi07G008610	Cucumber (Chinese Long) v3	cuclsiB323
Lsi07G008610	Cucumber (Chinese Long) v3	cuclsiB333
Lsi07G008610	Watermelon (97103) v2	lsiwmbB411
Lsi07G008610	Wax gourd	lsiwgoB544
Lsi07G008610	Cucumber (Gy14) v1	cgylsiB445
Lsi07G008610	Cucurbita maxima (Rimu)	cmalsiB325