Lsi07G007300 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G007300
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionChromosome 3B, genomic scaffold, cultivar Chinese Spring
Locationchr07 : 7889990 .. 7891186 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACTGCTCTTCTCTCAGTTCCTCCCCCATTCTTCCACTCCTCATCCTCCTATCGCTTTCCATCCACCACTTCTCTCCGATTTACATCATCTAGACCCGTCACCTTCCTCTCTTCCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTTCACCTTCTGTTGTTGACGAAGAAACTTATTCTTCTCCCCCAGATCAATTCTCTCTTCTCTCTGAATCTGACCCAGATGATTCTTCCTTCAGGTATTCTTCATAATCATCCCTTTTCTCTCTATTTGCAACTGACTCTGATCATACATGGGTTTCTATTATGCTAACTTTAATTCCATGCTGCTTAAATTTCTGTTTCGTTTATCTGTTATCCTAGCTGCGAGAACTCTGTTTTTCTTTTAATTTTTTAGTTTGCCCCTTAGCTATTAACCCGTCTCGTTGCTAGATAGATCCTTCTTCACTTTCAGAGGGAAAGGATTTGCCAATTTTCCATGCTATTTCTAGCAATTGGTTAAACAAAATGACTTCTAGGCTTCCTTTGGTCATACTAAATCATATTGGTGTAATTAGCTGAGAAACAAGCTGACACTGGTGAAGACTTGGATCAGCAATGAAAATCTCTAGCACCCCATTCAGTGGTTGAATGTTTCTCTGTTTCTCTAATTCTTTTGCTCGTACCTAGTGAAGTCCATGTATGTGTAAATGATGTGACTTTAATTAGCCCCGTGATGGAGAGTGCAAACTAATTGAAGTTTTCATTTCAAACCACATCTGGGGTCTCTTGTAACCATCAATCTGGATGTATGTTTTCAAGTCATTTTCACTTAATTTGTAATCAACTGTGTTCTTCTTGGTTTCAGATGTTATAATGATGGTGTCAATAGTATGGCTAAGAATGAGATTGTTTTGTGTTTCATTTCTTATAAACAGAGGTTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCTGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCTGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGGGAGGACTGAAGCCTCTGCCAGTGCTGGCAGAAAGGACTCGTCGAGGTACAATCCTAATATCCCTTTTTCGAAGTAA

mRNA sequence

ATGGGAACTGCTCTTCTCTCAGTTCCTCCCCCATTCTTCCACTCCTCATCCTCCTATCGCTTTCCATCCACCACTTCTCTCCGATTTACATCATCTAGACCCGTCACCTTCCTCTCTTCCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTTCACCTTCTGTTGTTGACGAAGAAACTTATTCTTCTCCCCCAGATCAATTCTCTCTTCTCTCTGAATCTGACCCAGATGATTCTTCCTTCAGAGGTTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCTGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCTGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGGGAGGACTGAAGCCTCTGCCAGTGCTGGCAGAAAGGACTCGTCGAGGTACAATCCTAATATCCCTTTTTCGAAGTAA

Coding sequence (CDS)

ATGGGAACTGCTCTTCTCTCAGTTCCTCCCCCATTCTTCCACTCCTCATCCTCCTATCGCTTTCCATCCACCACTTCTCTCCGATTTACATCATCTAGACCCGTCACCTTCCTCTCTTCCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTTCACCTTCTGTTGTTGACGAAGAAACTTATTCTTCTCCCCCAGATCAATTCTCTCTTCTCTCTGAATCTGACCCAGATGATTCTTCCTTCAGAGGTTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCTGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCTGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGGGAGGACTGAAGCCTCTGCCAGTGCTGGCAGAAAGGACTCGTCGAGGTACAATCCTAATATCCCTTTTTCGAAGTAA

Protein sequence

MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPFSK
Homology
[Close]
BLAST of Lsi07G007300 vs. TrEMBL
Match: A0A0A0KUY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052700 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.0e-66
Identity = 142/170 (83.53%), Postives = 147/170 (86.47%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           MGT+LLSVP PFFHSS   RF  TTS  F+SSRP  FLSSSSSSSSSSS     VVDEE 
Sbjct: 1   MGTSLLSVPAPFFHSSHRSRF--TTSFPFSSSRPSPFLSSSSSSSSSSS-----VVDEEL 60

Query: 61  YSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAY 120
            SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEGR+QGGIATVPGFGWWPIKAY
Sbjct: 61  NSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAY 120

Query: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPF 171
           RPCPGFVASGGRYKRRGQSMDEVTSGGGRT+ASAS GRKDSSRYNP I F
Sbjct: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSRYNPAISF 163

[Close]
BLAST of Lsi07G007300 vs. TrEMBL
Match: A0A0B0PMT8_GOSAR (Putative E3 ubiquitin-protein ligase MARCH10 OS=Gossypium arboreum GN=F383_05522 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-35
Identity = 91/152 (59.87%), Postives = 108/152 (71.05%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           M  ALLS PPP  H +S ++ P TTS R      + F+      +++SS++ P+  D+ T
Sbjct: 1   MAMALLSAPPPPSHKTSLFQRPYTTSFR-----SIAFIKYPYKLTAASSTA-PTAEDKPT 60

Query: 61  YSSPPDQFSLLSESDP----DDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
            S  PD  ++ SES      +D  FRGCKACG+EE+ERGCNGEGRIQGGIATVPGFGWWP
Sbjct: 61  AS--PDGVAVESESATMVAVEDPPFRGCKACGKEELERGCNGEGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGG 149
           IKAYRPCP FVASGGRY RRGQSMDEV SGGG
Sbjct: 121 IKAYRPCPAFVASGGRYTRRGQSMDEVASGGG 144

[Close]
BLAST of Lsi07G007300 vs. TrEMBL
Match: A0A0D2Q1H9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G256100 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.2e-35
Identity = 94/167 (56.29%), Postives = 113/167 (67.66%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           M  ALLS PPP  H +S ++ P TTS R      + F+      +++SS++ P+  D+ T
Sbjct: 1   MAMALLSAPPPPSHKTSFFQPPYTTSFR-----SIAFIKYPYKLTAASSTT-PTAEDKPT 60

Query: 61  YSSPPDQFSLLSESDP----DDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
            S  PD  ++ SES      +D  FRGCKACG+EE+ERGCNGEGRIQGGIATVPGFGWWP
Sbjct: 61  AS--PDGVAVESESATMVAVEDPPFRGCKACGKEELERGCNGEGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSR 164
           IKAYRPCP FVASGGRY RRGQSMDEV SGGG   +S     +  SR
Sbjct: 121 IKAYRPCPAFVASGGRYTRRGQSMDEVASGGGGRVSSIGISDEAESR 159

[Close]
BLAST of Lsi07G007300 vs. TrEMBL
Match: A0A0D2TCF4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G256100 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.1e-35
Identity = 94/168 (55.95%), Postives = 115/168 (68.45%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           M  ALLS PPP  H +S ++ P TTS R      + F+      +++SS++ P+  D+ T
Sbjct: 1   MAMALLSAPPPPSHKTSFFQPPYTTSFR-----SIAFIKYPYKLTAASSTT-PTAEDKPT 60

Query: 61  YSSPPDQFSLLSESDP----DDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWP 120
            S  PD  ++ SES      +D  FRGCKACG+EE+ERGCNGEGRIQGGIATVPGFGWWP
Sbjct: 61  AS--PDGVAVESESATMVAVEDPPFRGCKACGKEELERGCNGEGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPGFVASGGRYKRRGQSMDEVTS-GGGRTEASASAGRKDSSR 164
           IKAYRPCP FVASGGRY RRGQSMDEV S GGGR  +   +   +SS+
Sbjct: 121 IKAYRPCPAFVASGGRYTRRGQSMDEVASGGGGRVSSIGISDEAESSK 160

[Close]
BLAST of Lsi07G007300 vs. TrEMBL
Match: A0A061G7C7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016492 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.0e-33
Identity = 95/170 (55.88%), Postives = 110/170 (64.71%), Query Frame = 1 

Query: 1   MGTALLSVPP-----PFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSV 60
           M  ALLS PP      FF    S  F S T  ++ S +P   LS++SSSS+S++   P  
Sbjct: 1   MAMALLSAPPLSHQTSFFQRPYSPSFSSITFFKYPS-KPTIPLSTTSSSSTSTAEDKP-- 60

Query: 61  VDEETYSSPPDQFSLLSESDP---DDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGF 120
                 S+ PD   + SE      D   FRGCKACGREE+ERGCNGEGRIQGGIATVPGF
Sbjct: 61  ------SASPDVIPVQSEPATVAVDQPPFRGCKACGREELERGCNGEGRIQGGIATVPGF 120

Query: 121 GWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS 163
           GWWPIKAYRPCPGFVASGGRY+RRGQSMDEV S  GR   ++  G  D +
Sbjct: 121 GWWPIKAYRPCPGFVASGGRYRRRGQSMDEVAS--GRIGRASPVGTNDEA 159

[Close]
BLAST of Lsi07G007300 vs. TAIR10
Match: AT5G42070.1 (AT5G42070.1 unknown protein)

HSP 1 Score: 124.0 bits (310), Expect = 8.9e-29
Identity = 77/156 (49.36%), Postives = 97/156 (62.18%), Query Frame = 1 

Query: 6   LSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPP 65
           +S+P  F  ++ S++           SRP  + SSSS   + SS   P  +   + SS P
Sbjct: 8   ISLPRCFIFNNGSHK-----------SRP--WPSSSSFFLNKSSKHHPHPL--LSLSSSP 67

Query: 66  DQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPG 125
                    D +D +F GC+ACG+EE E GCNG+GRIQGGIATVPGFGWWPIKAYRPCP 
Sbjct: 68  SSVVETDNDDDNDLTFSGCRACGKEEKESGCNGDGRIQGGIATVPGFGWWPIKAYRPCPA 127

Query: 126 FVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDS 162
           FV +GGRY+R GQSMDEV  G G +++S S    DS
Sbjct: 128 FVEAGGRYRRIGQSMDEVAFGRGDSKSSTSVDTSDS 148

[Close]
BLAST of Lsi07G007300 vs. NCBI nr
Match: gi|700198262|gb|KGN53420.1| (hypothetical protein Csa_4G052700 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 2.9e-66
Identity = 142/170 (83.53%), Postives = 147/170 (86.47%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           MGT+LLSVP PFFHSS   RF  TTS  F+SSRP  FLSSSSSSSSSSS     VVDEE 
Sbjct: 1   MGTSLLSVPAPFFHSSHRSRF--TTSFPFSSSRPSPFLSSSSSSSSSSS-----VVDEEL 60

Query: 61  YSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAY 120
            SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEGR+QGGIATVPGFGWWPIKAY
Sbjct: 61  NSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAY 120

Query: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPF 171
           RPCPGFVASGGRYKRRGQSMDEVTSGGGRT+ASAS GRKDSSRYNP I F
Sbjct: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSRYNPAISF 163

[Close]
BLAST of Lsi07G007300 vs. NCBI nr
Match: gi|659102056|ref|XP_008451929.1| (PREDICTED: uncharacterized protein LOC103493082 isoform X1 [Cucumis melo])

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64
Identity = 140/165 (84.85%), Postives = 143/165 (86.67%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           MGTALLSVP PFFHSS   RF  TTSL F+SSRP TFLSSSSSSSS+S      VVDEE 
Sbjct: 1   MGTALLSVPAPFFHSSHRSRF--TTSLPFSSSRPTTFLSSSSSSSSTS------VVDEEI 60

Query: 61  YSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAY 120
            SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEGRIQGGIATVPGFGWWPIKAY
Sbjct: 61  NSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAY 120

Query: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYN 166
           RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASAS  RKDSSR N
Sbjct: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSSREN 157

[Close]
BLAST of Lsi07G007300 vs. NCBI nr
Match: gi|659102058|ref|XP_008451930.1| (PREDICTED: uncharacterized protein LOC103493082 isoform X2 [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63
Identity = 138/162 (85.19%), Postives = 141/162 (87.04%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           MGTALLSVP PFFHSS   RF  TTSL F+SSRP TFLSSSSSSSS+S      VVDEE 
Sbjct: 1   MGTALLSVPAPFFHSSHRSRF--TTSLPFSSSRPTTFLSSSSSSSSTS------VVDEEI 60

Query: 61  YSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAY 120
            SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEGRIQGGIATVPGFGWWPIKAY
Sbjct: 61  NSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIKAY 120

Query: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS 163
           RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASAS  RKDSS
Sbjct: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSS 154

[Close]
BLAST of Lsi07G007300 vs. NCBI nr
Match: gi|778691097|ref|XP_011653222.1| (PREDICTED: uncharacterized protein LOC101208661 isoform X1 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 5.2e-63
Identity = 137/163 (84.05%), Postives = 142/163 (87.12%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           MGT+LLSVP PFFHSS   RF  TTS  F+SSRP  FLSSSSSSSSSSS     VVDEE 
Sbjct: 1   MGTSLLSVPAPFFHSSHRSRF--TTSFPFSSSRPSPFLSSSSSSSSSSS-----VVDEEL 60

Query: 61  YSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAY 120
            SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEGR+QGGIATVPGFGWWPIKAY
Sbjct: 61  NSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAY 120

Query: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSR 164
           RPCPGFVASGGRYKRRGQSMDEVTSGGGRT+ASAS GRKDSSR
Sbjct: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSR 156

[Close]
BLAST of Lsi07G007300 vs. NCBI nr
Match: gi|449462525|ref|XP_004148991.1| (PREDICTED: uncharacterized protein LOC101208661 isoform X2 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-62
Identity = 136/162 (83.95%), Postives = 141/162 (87.04%), Query Frame = 1 

Query: 1   MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEET 60
           MGT+LLSVP PFFHSS   RF  TTS  F+SSRP  FLSSSSSSSSSSS     VVDEE 
Sbjct: 1   MGTSLLSVPAPFFHSSHRSRF--TTSFPFSSSRPSPFLSSSSSSSSSSS-----VVDEEL 60

Query: 61  YSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFGWWPIKAY 120
            SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEGR+QGGIATVPGFGWWPIKAY
Sbjct: 61  NSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPIKAY 120

Query: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS 163
           RPCPGFVASGGRYKRRGQSMDEVTSGGGRT+ASAS GRKDSS
Sbjct: 121 RPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS 155

The following BLAST results are available for this feature:
BLAST of Lsi07G007300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi07G007300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUY4_CUCSA2.0e-6683.53Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052700 PE=4 SV=1[more]
A0A0B0PMT8_GOSAR1.9e-3559.87Putative E3 ubiquitin-protein ligase MARCH10 OS=Gossypium arboreum GN=F383_05522... [more]
A0A0D2Q1H9_GOSRA3.2e-3556.29Uncharacterized protein OS=Gossypium raimondii GN=B456_008G256100 PE=4 SV=1[more]
A0A0D2TCF4_GOSRA7.1e-3555.95Uncharacterized protein OS=Gossypium raimondii GN=B456_008G256100 PE=4 SV=1[more]
A0A061G7C7_THECC1.0e-3355.88Uncharacterized protein OS=Theobroma cacao GN=TCM_016492 PE=4 SV=1[more]
BLAST of Lsi07G007300 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42070.18.9e-2949.36 unknown protein[more]
BLAST of Lsi07G007300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198262|gb|KGN53420.1|2.9e-6683.53hypothetical protein Csa_4G052700 [Cucumis sativus][more]
gi|659102056|ref|XP_008451929.1|1.6e-6484.85PREDICTED: uncharacterized protein LOC103493082 isoform X1 [Cucumis melo][more]
gi|659102058|ref|XP_008451930.1|1.8e-6385.19PREDICTED: uncharacterized protein LOC103493082 isoform X2 [Cucumis melo][more]
gi|778691097|ref|XP_011653222.1|5.2e-6384.05PREDICTED: uncharacterized protein LOC101208661 isoform X1 [Cucumis sativus][more]
gi|449462525|ref|XP_004148991.1|2.0e-6283.95PREDICTED: uncharacterized protein LOC101208661 isoform X2 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030154 cell differentiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G007300.1Lsi07G007300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G007300Csa4G052700Cucumber (Chinese Long) v2culsiB304
Lsi07G007300CSPI04G06510Wild cucumber (PI 183967)cpilsiB304
Lsi07G007300Cucsa.114890Cucumber (Gy14) v1cgylsiB161
Lsi07G007300CmaCh04G006770Cucurbita maxima (Rimu)cmalsiB699
Lsi07G007300Cla012815Watermelon (97103) v1lsiwmB434
Lsi07G007300MELO3C016276Melon (DHL92) v3.5.1lsimeB455
Lsi07G007300ClCG07G011490Watermelon (Charleston Gray)lsiwcgB412
Lsi07G007300MELO3C016276.2Melon (DHL92) v3.6.1lsimedB473
Lsi07G007300Cla97C07G138250Watermelon (97103) v2lsiwmbB411
Lsi07G007300Cp4.1LG01g00520Cucurbita pepo (Zucchini)cpelsiB378
Lsi07G007300CsGy4G006440Cucumber (Gy14) v2cgyblsiB278
Lsi07G007300Carg13081Silver-seed gourdcarlsiB040
Lsi07G007300CsaV3_4G006730Cucumber (Chinese Long) v3cuclsiB323
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G007300Bottle gourd (USVL1VR-Ls)lsilsiB020
Lsi07G007300Cucumber (Gy14) v1cgylsiB492
Lsi07G007300Cucurbita maxima (Rimu)cmalsiB292
Lsi07G007300Cucurbita maxima (Rimu)cmalsiB325
Lsi07G007300Cucurbita moschata (Rifu)cmolsiB280
Lsi07G007300Cucurbita moschata (Rifu)cmolsiB314
Lsi07G007300Cucurbita moschata (Rifu)cmolsiB693
Lsi07G007300Cucurbita pepo (Zucchini)cpelsiB157
Lsi07G007300Cucurbita pepo (Zucchini)cpelsiB184
Lsi07G007300Wild cucumber (PI 183967)cpilsiB391
Lsi07G007300Cucumber (Chinese Long) v2culsiB387
Lsi07G007300Melon (DHL92) v3.5.1lsimeB427
Lsi07G007300Watermelon (Charleston Gray)lsiwcgB397
Lsi07G007300Watermelon (97103) v1lsiwmB456
Lsi07G007300Cucumber (Gy14) v2cgyblsiB353
Lsi07G007300Melon (DHL92) v3.6.1lsimedB447
Lsi07G007300Silver-seed gourdcarlsiB596
Lsi07G007300Cucumber (Chinese Long) v3cuclsiB410
Lsi07G007300Watermelon (97103) v2lsiwmbB394
Lsi07G007300Wax gourdlsiwgoB542
Lsi07G007300Wax gourdlsiwgoB544