Cp4.1LG01g00520 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g00520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDbj|BAA92898.1
LocationCp4.1LG01 : 3525632 .. 3528327 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGGCTGCCCATGGGCTTCTTTCGCAACGCAAATTGAAAACAAGGTAGAAATTATAAATTTGAAAATGGAAATTCCCAATCGACTTGGAATTCTGTGAACCTCTAATTCCCCAGCGGAGCAAAGAATATCCGTGCCCCCGTTGTCTCGTGTCCACCACGCACAGATGGGCACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTACGAGATTGTCTCATGGACCCAGAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCCTCTTCTTCTGCTTCTGTTGTAGATGAAGAAACAAATTCTTCTCCTCCAGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGCTTCTTCCTTCAGGTATTGATGATTTGATCGTTCGTCTCTCTGTTTGCAAGATTCGGATGATAGAAGGGTGATTTTGATAACTTTAAATTCCATGGTGTTTGTGTGTTCGTTTATTGGATTACATTTATGTTGTCTTACCCCACAAGATGTGATTATCATCCATAAAACTTCCTTTGAATTTTGGGTTTGCCCCTTGACTATCCATGTGGTTACTCATGCTCTAGTTGAGAATTTAAATATGTCCTTCATTTGAAATAGTCACCTTATGAGGGAAAACATGCGTCAATTTTCCTTGTTTCTCCTAGGAACTAGTTAAACAAACAAGATGTGGTAAGAACAAAATAACCTCTGGGCTGCCTCTGCTCATACTCAATCCGATTGGTGTAATCAGCTGAGAACAAGACCTGGTTCAGCATTTAAGATCAGTATCATCCCATCATGACTGAATGTTTCTCTATTTCGCTTGTTCTTGTACATATTATAGGCCATGTATTTCAGTGTGTAAAGGACATGAATTGAATCAGTCCACAATGCAGAGTGAAAACTAGTTGAACGGTTCATTTCAAACCACACCTGGGGTCTCTTGAGACCATCAATTTAGATATATTCAAGTCATTTTCACTTAGAATGTTATGGTCTGAATTTTTCCTGCCTTAACTTACAATAATGATGTTGCCAACCATATGGCTTAGAACAATCTTGTTTTCTCTTTCATTTCTTATAAACAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGATGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACGTCTGGAGGAGCAAGGACAGAAGCCTCTGCTGCTGCTGGCAAAAAGGACTCGTCGAGGTACAAGCCATATATCCCTTTCCTTTGAAGTACATTCATATGTTTATATACTTTCAGAACTTGTAATGTTGCAATCTAACATTCTGCTCTTGTATACTGACTTGCAAAATGACCAAACTGAATGCTTGATACCAATTTTATGAACTTGCTCACACTATAGGGATAAGAATATAGCCGTAAGTTTGGCGAAAATAGCTTCTCCCATTTTTCTTTGGTTGGGAGAAATGAAAGTATTATCTCATTATCAGAGTACTGTAGGAGAGCAAGGCCATCTCTTGTTAGCTTCATTTTGTTCTCATTTTTCTTTGGTCGGCATGGTTGCTTTCATAACTGGTTTCTGGGTTGTCAGTAAAATTCTCTTGTTAGCTTCATTTTGTTGTCATTGTTCTTATCAGCCTGATAGTAAGAGAAGGTAGAGCTGTTAGGATTAGGCATTAAAGATTGAAACCATGATGTAATTTCCATAATGTGACCAAGTTTCTTGTTATCATTGTGGTTTAGGATTTCCCGAGTTGTTTTTCTTGAATTTCCTTCATGTTTTACTTTGAGTTTCTAACTTTTAATGATACCGATTCATTCACTTTTCGTTACATCGTGTCGTCCAGCAAGAAAAAGTCGGCAAAGGGGTAATTGACCCAACAAGTTGATACACAAACAGGGAGGGAATGAAGGATGGATAATGTAGAATTGGTTTCATGGAAATACTAATGTAAAGGGGTGAGAACTGAACAACAAATTCTCACTTCTGTAGGCTTCTGTAACATCAGAATATGCTGCATTTAAAGCACAGAAAATTTTCCAATCCATGGTTTGTTTGAAGCGTATCAAGATTCATTCTTTGCAGGATATTTTCTTTTCCAGTTCCTAAAGGATGCCTTGTTCGTTCCCTCATGCCTGCTTCTCCCAGGAATATTTCACCAAAGCAGTTTGATTTCAAGAAATTTGAACTAGAAGTTGGTATGAGCAGGTGATCATACTTACTATTTCCTTTTTCTTTTCTTTTCTTTTTTTCTCTTAATTCTTACATAAATGAATGAGAAATCAAGACTTTTCTTGTTCTAGAAACAAAGAATCTAAAAGGAACATTGTAACTACTCTTATTTTTATCAAAATTTCTCCATCAAAAAATATTTAAAAAACCCATTATTATTTATAAGAAAAAACAAAGCAATTTGAAATAGTCAAGAAATTGGTGGCAGATTTTGAAAGTTATGTAAATTTGACAAACAAATGTTGAAAAAGATGTATCAGCAAATCTTAAATTTTGATGCGTTCATCCAACCACCCAACCAAATTTTAATTGTCTATCACATATTATGGCTTG

mRNA sequence

CTTGGCTGCCCATGGGCTTCTTTCGCAACGCAAATTGAAAACAAGGTAGAAATTATAAATTTGAAAATGGAAATTCCCAATCGACTTGGAATTCTGTGAACCTCTAATTCCCCAGCGGAGCAAAGAATATCCGTGCCCCCGTTGTCTCGTGTCCACCACGCACAGATGGGCACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTACGAGATTGTCTCATGGACCCAGAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCCTCTTCTTCTGCTTCTGTTGTAGATGAAGAAACAAATTCTTCTCCTCCAGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGCTTCTTCCTTCAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGATGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACGTCTGGAGGAGCAAGGACAGAAGCCTCTGCTGCTGCTGGCAAAAAGGACTCGTCGAGGATATTTTCTTTTCCAGTTCCTAAAGGATGCCTTGTTCGTTCCCTCATGCCTGCTTCTCCCAGGAATATTTCACCAAAGCAGTTTGATTTCAAGAAATTTGAACTAGAAGTTGGTATGAGCAGGTGATCATACTTACTATTTCCTTTTTCTTTTCTTTTCTTTTTTTCTCTTAATTCTTACATAAATGAATGAGAAATCAAGACTTTTCTTGTTCTAGAAACAAAGAATCTAAAAGGAACATTGTAACTACTCTTATTTTTATCAAAATTTCTCCATCAAAAAATATTTAAAAAACCCATTATTATTTATAAGAAAAAACAAAGCAATTTGAAATAGTCAAGAAATTGGTGGCAGATTTTGAAAGTTATGTAAATTTGACAAACAAATGTTGAAAAAGATGTATCAGCAAATCTTAAATTTTGATGCGTTCATCCAACCACCCAACCAAATTTTAATTGTCTATCACATATTATGGCTTG

Coding sequence (CDS)

ATGGGCACTGCGCTTCTCTCAGTTCCTGCGCCTCAGCGAGCTCCATTCTTCCACTCCTCCTATGCAACCACTACGAGATTGTCTCATGGACCCAGAACTTCACTCAGATTTTCATCATCTAGGGGCGTCAGCTTCCTCTCTTCCTCCTCCTCTTCTTCTGCTTCTGTTGTAGATGAAGAAACAAATTCTTCTCCTCCAGACGACCTCTCTCTTCAGTCTGAATCAGACCCTGATGCTTCTTCCTTCAGAGGATGCAAAGCCTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGATGGAAGGATACAAGGTGGCATTGCAACAGTCCCAGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGAATTTGTAGCATCCGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACGTCTGGAGGAGCAAGGACAGAAGCCTCTGCTGCTGCTGGCAAAAAGGACTCGTCGAGGATATTTTCTTTTCCAGTTCCTAAAGGATGCCTTGTTCGTTCCCTCATGCCTGCTTCTCCCAGGAATATTTCACCAAAGCAGTTTGATTTCAAGAAATTTGAACTAGAAGTTGGTATGAGCAGGTGA

Protein sequence

MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSSSSSASVVDEETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWPIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSRIFSFPVPKGCLVRSLMPASPRNISPKQFDFKKFELEVGMSR
Homology
[Close]
BLAST of Cp4.1LG01g00520 vs. TrEMBL
Match: A0A0A0KUY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052700 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.3e-58
Identity = 129/166 (77.71%), Postives = 138/166 (83.13%), Query Frame = 1 

Query: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSS--SSSASVVD 60
           MGT+LLSVPAP    FFHSS+ +         TS  FSSSR   FLSSSS  SSS+SVVD
Sbjct: 1   MGTSLLSVPAP----FFHSSHRSRFT------TSFPFSSSRPSPFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWPI 120
           EE NSS PD LSLQSESDPD SSFRGCKACGKEEIERGCNG+GR+QGGIATVPGFGWWPI
Sbjct: 61  EELNSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSR 165
           KAYRPCP FVASGGRYKRRGQSMDEVTSGG RT+ASA+ G+KDSSR
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSR 156

[Close]
BLAST of Cp4.1LG01g00520 vs. TrEMBL
Match: A0A067JN37_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20433 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-35
Identity = 89/169 (52.66%), Postives = 113/169 (66.86%), Query Frame = 1 

Query: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSSSSSASVVDEE 60
           M   ++SVP P++  F    Y+ T    +G  T +R+ S + +   SSSSSSS  VVD+ 
Sbjct: 1   MAITVISVPTPRQTIFSQRPYSNTNTCLNGSPTIIRYPS-KFIIPRSSSSSSSTPVVDDG 60

Query: 61  TNSSPPDDLSLQSES---DPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWP 120
                PD L +QSES   D +  +  GCKACG+ E+ERGCNG+GRIQGGIATVPGFGWWP
Sbjct: 61  PTPPSPDPLPVQSESAAVDAEEFAIGGCKACGRPELERGCNGEGRIQGGIATVPGFGWWP 120

Query: 121 IKAYRPCPEFVASGGRYKRRGQSMDEVT-----SGGARTEASAAAGKKD 162
           IKAYRPCP FVA+GGRY+RRGQSMDEV       GG+ TE  ++  ++D
Sbjct: 121 IKAYRPCPGFVAAGGRYRRRGQSMDEVAFGRGEKGGSSTEVESSKKRRD 168

[Close]
BLAST of Cp4.1LG01g00520 vs. TrEMBL
Match: B9RCV4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692420 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.5e-33
Identity = 90/175 (51.43%), Postives = 113/175 (64.57%), Query Frame = 1 

Query: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLS---SSSSSSASVV 60
           M   L+SVP   +       Y T         T  R+SS + ++F++   SSSSSS SVV
Sbjct: 1   MAITLVSVPTINQTLSSQRPYNTNLNTL----TLTRYSSIKSITFINRLCSSSSSSTSVV 60

Query: 61  DEETNSSPPDDLSLQSESDP---DASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFG 120
           +E+  +S PDDL +QS   P   D     GCKACG++EIE+GCNG+GRIQGGIATV GFG
Sbjct: 61  EEDGPASTPDDLPVQSPLPPVNADEVPVGGCKACGRQEIEKGCNGEGRIQGGIATVSGFG 120

Query: 121 WWPIKAYRPCPEFVASGGRYKRRGQSMDEVTSG--------GARTEASAAAGKKD 162
           WWPIKAYRPCP FVASGGRY+R+GQSMDEV SG        G+ TE  ++  ++D
Sbjct: 121 WWPIKAYRPCPGFVASGGRYRRQGQSMDEVVSGRGNPGTPVGSSTEVESSKERQD 171

[Close]
BLAST of Cp4.1LG01g00520 vs. TrEMBL
Match: A0A0D2TCF4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G256100 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.9e-33
Identity = 91/172 (52.91%), Postives = 114/172 (66.28%), Query Frame = 1 

Query: 1   MGTALLSVPAP--QRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSSSSSASVVD 60
           M  ALLS P P   +  FF   Y T+ R       S+ F   +    L+++SS++ +  D
Sbjct: 1   MAMALLSAPPPPSHKTSFFQPPYTTSFR-------SIAFI--KYPYKLTAASSTTPTAED 60

Query: 61  EETNSSPPDDLSLQSESDP----DASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFG 120
           + T S  PD ++++SES      +   FRGCKACGKEE+ERGCNG+GRIQGGIATVPGFG
Sbjct: 61  KPTAS--PDGVAVESESATMVAVEDPPFRGCKACGKEELERGCNGEGRIQGGIATVPGFG 120

Query: 121 WWPIKAYRPCPEFVASGGRYKRRGQSMDEVTS-GGARTEASAAAGKKDSSRI 166
           WWPIKAYRPCP FVASGGRY RRGQSMDEV S GG R  +   + + +SS+I
Sbjct: 121 WWPIKAYRPCPAFVASGGRYTRRGQSMDEVASGGGGRVSSIGISDEAESSKI 161

[Close]
BLAST of Cp4.1LG01g00520 vs. TrEMBL
Match: A0A0D2Q1H9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G256100 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-32
Identity = 90/170 (52.94%), Postives = 110/170 (64.71%), Query Frame = 1 

Query: 1   MGTALLSVPAP--QRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSSSSSASVVD 60
           M  ALLS P P   +  FF   Y T+ R       S+ F   +    L+++SS++ +  D
Sbjct: 1   MAMALLSAPPPPSHKTSFFQPPYTTSFR-------SIAFI--KYPYKLTAASSTTPTAED 60

Query: 61  EETNSSPPDDLSLQSESDP----DASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFG 120
           + T S  PD ++++SES      +   FRGCKACGKEE+ERGCNG+GRIQGGIATVPGFG
Sbjct: 61  KPTAS--PDGVAVESESATMVAVEDPPFRGCKACGKEELERGCNGEGRIQGGIATVPGFG 120

Query: 121 WWPIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSR 165
           WWPIKAYRPCP FVASGGRY RRGQSMDEV SGG    +S     +  SR
Sbjct: 121 WWPIKAYRPCPAFVASGGRYTRRGQSMDEVASGGGGRVSSIGISDEAESR 159

[Close]
BLAST of Cp4.1LG01g00520 vs. TAIR10
Match: AT5G42070.1 (AT5G42070.1 unknown protein)

HSP 1 Score: 128.6 bits (322), Expect = 4.3e-30
Identity = 70/117 (59.83%), Postives = 82/117 (70.09%), Query Frame = 1 

Query: 46  LSSSSSSSASVVDEETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQG 105
           L S SSS +SVV  ET++   +DL+           F GC+ACGKEE E GCNGDGRIQG
Sbjct: 45  LLSLSSSPSSVV--ETDNDDDNDLT-----------FSGCRACGKEEKESGCNGDGRIQG 104

Query: 106 GIATVPGFGWWPIKAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDS 163
           GIATVPGFGWWPIKAYRPCP FV +GGRY+R GQSMDEV  G   +++S +    DS
Sbjct: 105 GIATVPGFGWWPIKAYRPCPAFVEAGGRYRRIGQSMDEVAFGRGDSKSSTSVDTSDS 148

[Close]
BLAST of Cp4.1LG01g00520 vs. NCBI nr
Match: gi|659102056|ref|XP_008451929.1| (PREDICTED: uncharacterized protein LOC103493082 isoform X1 [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 5.4e-59
Identity = 132/165 (80.00%), Postives = 139/165 (84.24%), Query Frame = 1 

Query: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSSSSSA-SVVDE 60
           MGTALLSVPAP    FFHSS+ +         TSL FSSSR  +FLSSSSSSS+ SVVDE
Sbjct: 1   MGTALLSVPAP----FFHSSHRSRFT------TSLPFSSSRPTTFLSSSSSSSSTSVVDE 60

Query: 61  ETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWPIK 120
           E NSS PD LSLQSESDPD SSFRGCKACGKEEIERGCNG+GRIQGGIATVPGFGWWPIK
Sbjct: 61  EINSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIK 120

Query: 121 AYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSR 165
           AYRPCP FVASGGRYKRRGQSMDEVTSGG RTEASA+  +KDSSR
Sbjct: 121 AYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSSR 155

[Close]
BLAST of Cp4.1LG01g00520 vs. NCBI nr
Match: gi|659102058|ref|XP_008451930.1| (PREDICTED: uncharacterized protein LOC103493082 isoform X2 [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 2.1e-58
Identity = 131/164 (79.88%), Postives = 138/164 (84.15%), Query Frame = 1 

Query: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSSSSSA-SVVDE 60
           MGTALLSVPAP    FFHSS+ +         TSL FSSSR  +FLSSSSSSS+ SVVDE
Sbjct: 1   MGTALLSVPAP----FFHSSHRSRFT------TSLPFSSSRPTTFLSSSSSSSSTSVVDE 60

Query: 61  ETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWPIK 120
           E NSS PD LSLQSESDPD SSFRGCKACGKEEIERGCNG+GRIQGGIATVPGFGWWPIK
Sbjct: 61  EINSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRIQGGIATVPGFGWWPIK 120

Query: 121 AYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSS 164
           AYRPCP FVASGGRYKRRGQSMDEVTSGG RTEASA+  +KDSS
Sbjct: 121 AYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASVSRKDSS 154

[Close]
BLAST of Cp4.1LG01g00520 vs. NCBI nr
Match: gi|778691097|ref|XP_011653222.1| (PREDICTED: uncharacterized protein LOC101208661 isoform X1 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 4.6e-58
Identity = 129/170 (75.88%), Postives = 141/170 (82.94%), Query Frame = 1 

Query: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSS--SSSASVVD 60
           MGT+LLSVPAP    FFHSS+ +         TS  FSSSR   FLSSSS  SSS+SVVD
Sbjct: 1   MGTSLLSVPAP----FFHSSHRSRFT------TSFPFSSSRPSPFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWPI 120
           EE NSS PD LSLQSESDPD SSFRGCKACGKEEIERGCNG+GR+QGGIATVPGFGWWPI
Sbjct: 61  EELNSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSRIFSF 169
           KAYRPCP FVASGGRYKRRGQSMDEVTSGG RT+ASA+ G+KDSSR +++
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSRKWTY 160

[Close]
BLAST of Cp4.1LG01g00520 vs. NCBI nr
Match: gi|700198262|gb|KGN53420.1| (hypothetical protein Csa_4G052700 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 129/166 (77.71%), Postives = 138/166 (83.13%), Query Frame = 1 

Query: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSS--SSSASVVD 60
           MGT+LLSVPAP    FFHSS+ +         TS  FSSSR   FLSSSS  SSS+SVVD
Sbjct: 1   MGTSLLSVPAP----FFHSSHRSRFT------TSFPFSSSRPSPFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWPI 120
           EE NSS PD LSLQSESDPD SSFRGCKACGKEEIERGCNG+GR+QGGIATVPGFGWWPI
Sbjct: 61  EELNSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSSR 165
           KAYRPCP FVASGGRYKRRGQSMDEVTSGG RT+ASA+ G+KDSSR
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSSR 156

[Close]
BLAST of Cp4.1LG01g00520 vs. NCBI nr
Match: gi|449462525|ref|XP_004148991.1| (PREDICTED: uncharacterized protein LOC101208661 isoform X2 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 5.1e-57
Identity = 128/165 (77.58%), Postives = 137/165 (83.03%), Query Frame = 1 

Query: 1   MGTALLSVPAPQRAPFFHSSYATTTRLSHGPRTSLRFSSSRGVSFLSSSS--SSSASVVD 60
           MGT+LLSVPAP    FFHSS+ +         TS  FSSSR   FLSSSS  SSS+SVVD
Sbjct: 1   MGTSLLSVPAP----FFHSSHRSRFT------TSFPFSSSRPSPFLSSSSSSSSSSSVVD 60

Query: 61  EETNSSPPDDLSLQSESDPDASSFRGCKACGKEEIERGCNGDGRIQGGIATVPGFGWWPI 120
           EE NSS PD LSLQSESDPD SSFRGCKACGKEEIERGCNG+GR+QGGIATVPGFGWWPI
Sbjct: 61  EELNSSSPDQLSLQSESDPDDSSFRGCKACGKEEIERGCNGEGRMQGGIATVPGFGWWPI 120

Query: 121 KAYRPCPEFVASGGRYKRRGQSMDEVTSGGARTEASAAAGKKDSS 164
           KAYRPCP FVASGGRYKRRGQSMDEVTSGG RT+ASA+ G+KDSS
Sbjct: 121 KAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTDASASVGRKDSS 155

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g00520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g00520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUY4_CUCSA9.3e-5877.71Uncharacterized protein OS=Cucumis sativus GN=Csa_4G052700 PE=4 SV=1[more]
A0A067JN37_JATCU1.0e-3552.66Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20433 PE=4 SV=1[more]
B9RCV4_RICCO3.5e-3351.43Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692420 PE=4 SV=1[more]
A0A0D2TCF4_GOSRA7.9e-3352.91Uncharacterized protein OS=Gossypium raimondii GN=B456_008G256100 PE=4 SV=1[more]
A0A0D2Q1H9_GOSRA1.8e-3252.94Uncharacterized protein OS=Gossypium raimondii GN=B456_008G256100 PE=4 SV=1[more]
BLAST of Cp4.1LG01g00520 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42070.14.3e-3059.83 unknown protein[more]
BLAST of Cp4.1LG01g00520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102056|ref|XP_008451929.1|5.4e-5980.00PREDICTED: uncharacterized protein LOC103493082 isoform X1 [Cucumis melo][more]
gi|659102058|ref|XP_008451930.1|2.1e-5879.88PREDICTED: uncharacterized protein LOC103493082 isoform X2 [Cucumis melo][more]
gi|778691097|ref|XP_011653222.1|4.6e-5875.88PREDICTED: uncharacterized protein LOC101208661 isoform X1 [Cucumis sativus][more]
gi|700198262|gb|KGN53420.1|1.3e-5777.71hypothetical protein Csa_4G052700 [Cucumis sativus][more]
gi|449462525|ref|XP_004148991.1|5.1e-5777.58PREDICTED: uncharacterized protein LOC101208661 isoform X2 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g00520.1Cp4.1LG01g00520.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g00520Cucsa.114890Cucumber (Gy14) v1cgycpeB0269
Cp4.1LG01g00520CmaCh04G006770Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g00520CmoCh04G007230Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g00520Cla012815Watermelon (97103) v1cpewmB422
Cp4.1LG01g00520Csa4G052700Cucumber (Chinese Long) v2cpecuB406
Cp4.1LG01g00520MELO3C016276Melon (DHL92) v3.5.1cpemeB415
Cp4.1LG01g00520ClCG07G011490Watermelon (Charleston Gray)cpewcgB408
Cp4.1LG01g00520CSPI04G06510Wild cucumber (PI 183967)cpecpiB405
Cp4.1LG01g00520Lsi07G007300Bottle gourd (USVL1VR-Ls)cpelsiB378
Cp4.1LG01g00520MELO3C016276.2Melon (DHL92) v3.6.1cpemedB486
Cp4.1LG01g00520CsaV3_4G006730Cucumber (Chinese Long) v3cpecucB0503
Cp4.1LG01g00520Bhi01G002310Wax gourdcpewgoB0518
Cp4.1LG01g00520CsGy4G006440Cucumber (Gy14) v2cgybcpeB508
Cp4.1LG01g00520Carg13081Silver-seed gourdcarcpeB0061
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g00520Cucumber (Chinese Long) v3cpecucB0538
Cp4.1LG01g00520Cucurbita pepo (Zucchini)cpecpeB206
Cp4.1LG01g00520Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g00520Cucurbita maxima (Rimu)cmacpeB324
Cp4.1LG01g00520Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g00520Cucurbita moschata (Rifu)cmocpeB287
Cp4.1LG01g00520Cucurbita moschata (Rifu)cmocpeB313
Cp4.1LG01g00520Wild cucumber (PI 183967)cpecpiB431
Cp4.1LG01g00520Cucumber (Chinese Long) v2cpecuB432
Cp4.1LG01g00520Melon (DHL92) v3.5.1cpemeB362