Lsi07G003680 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G003680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Humj1, putative
Location	chr07 : 3947708 .. 3948850 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAGTTGTTCGTGAGATTAGTTGAGGTGTGTGTAAGTTGGTCCAGACACGGATCACAGATATAAAAAAAAAACTTTAGTTTTATAATTATTTGTCAATATTTCTCTAGCTTAATCTCTTTGTATGTGTGTGTGGGTAGAAGAGTGTTTATATTTGGTATTTGGCTGTTTTTATTGATATATGATGTTAGGTAGAGTTTTGAAGGGGAGAAATTAGAAGAGATCATCAGTTGCAAAAAGATGGGAACAATCACAGAGGCTTTAGAATGCTCTCTAAAAAAATGTTCTTTAAGCAGCCATCTTCAAACAACAACTCAATCTATTTCTTCTTCAGATTCTTCCAACAACGACAACGACGACGACGACGACAACAACAAAATCCCTTCTTCTATTCATCAATCAACCTCTTTGGATCTCAACTCCCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGGTTTTTCCTTTTTCTTTCTTCATCCTCTTTTGTTTCTTACCTTTAATATATAATTCCCAATAAGAAACAAAAGTAGGGTTTGAGTTTTTCTTTTTTTAGAAAAAAAAAATCCCCCATTTTTGCCCTTTTAATGCTTCTACAATTCATGATGGAGGGTTAGGGTTTGAATTTCAAGATGATGGATTTATTTATTTATTTTTATTTTTTTTAATTTTGAAAGACAGGGGAGATATACTATATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAAGAGAAGATGATCAATATAGTGAAGATTATTGTTATTACTATTCTGACGACGACGACGAGAGCTCTTACGACAGCGAAGAGTCGTCGACGGAATCGTCAAATAACAACAACAACAAAAACAAGAAGTTCGTGGTAGAAGAAGAAGAAGAAGAAAAAGATGTTTTGGTGGTTGGAGGTTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAACATCTTGAAGATTGCCCTAAATGCAATGGTCAGCTTCTTCATTTTGATCGCTCATGAATATCAGACAAACCCCTTCCTCTATTTTTCAATTCCATTATTCCATTTCTTTTCTTTTTTTCTTTTTTCATGGGAAAAAGAGAGGAAGAAAGAGGAAGAAATTAAAAGAGAGAGAGAGAG

mRNA sequence

ACGAGTTGTTCGTGAGATTAGTTGAGGTGTGTGTAAGTTGGTCCAGACACGGATCACAGATATAAAAAAAAAACTTTAGTTTTATAATTATTTGTCAATATTTCTCTAGCTTAATCTCTTTGTATGTGTGTGTGGGTAGAAGAGTGTTTATATTTGGTATTTGGCTGTTTTTATTGATATATGATGTTAGGTAGAGTTTTGAAGGGGAGAAATTAGAAGAGATCATCAGTTGCAAAAAGATGGGAACAATCACAGAGGCTTTAGAATGCTCTCTAAAAAAATGTTCTTTAAGCAGCCATCTTCAAACAACAACTCAATCTATTTCTTCTTCAGATTCTTCCAACAACGACAACGACGACGACGACGACAACAACAAAATCCCTTCTTCTATTCATCAATCAACCTCTTTGGATCTCAACTCCCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGACAGGGGAGATATACTATATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAAGAGAAGATGATCAATATAGTGAAGATTATTGTTATTACTATTCTGACGACGACGACGAGAGCTCTTACGACAGCGAAGAGTCGTCGACGGAATCGTCAAATAACAACAACAACAAAAACAAGAAGTTCGTGGTAGAAGAAGAAGAAGAAGAAAAAGATGTTTTGGTGGTTGGAGGTTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAACATCTTGAAGATTGCCCTAAATGCAATGGTCAGCTTCTTCATTTTGATCGCTCATGAATATCAGACAAACCCCTTCCTCTATTTTTCAATTCCATTATTCCATTTCTTTTCTTTTTTTCTTTTTTCATGGGAAAAAGAGAGGAAGAAAGAGGAAGAAATTAAAAGAGAGAGAGAGAG

Coding sequence (CDS)

ATGGGAACAATCACAGAGGCTTTAGAATGCTCTCTAAAAAAATGTTCTTTAAGCAGCCATCTTCAAACAACAACTCAATCTATTTCTTCTTCAGATTCTTCCAACAACGACAACGACGACGACGACGACAACAACAAAATCCCTTCTTCTATTCATCAATCAACCTCTTTGGATCTCAACTCCCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGACAGGGGAGATATACTATATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAAGAGAAGATGATCAATATAGTGAAGATTATTGTTATTACTATTCTGACGACGACGACGAGAGCTCTTACGACAGCGAAGAGTCGTCGACGGAATCGTCAAATAACAACAACAACAAAAACAAGAAGTTCGTGGTAGAAGAAGAAGAAGAAGAAAAAGATGTTTTGGTGGTTGGAGGTTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAACATCTTGAAGATTGCCCTAAATGCAATGGTCAGCTTCTTCATTTTGATCGCTCATGA

Protein sequence

MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTREDDQYSEDYCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLLHFDRS

Homology

[Close]

BLAST of Lsi07G003680 vs. TrEMBL
Match: A0A0A0KTY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G009890 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.3e-62
Identity = 146/202 (72.28%), Postives = 154/202 (76.24%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQ-----ST 60
           MGTITEALECSL+K    SH Q    S SSS S ++ +          SSIHQ     ST
Sbjct: 12  MGTITEALECSLQK----SHQQPLISSSSSSSSFSSSS----------SSIHQHQHQQST 71

Query: 61  SLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-----REDDQYSEDYCY 120
           SLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST      +DD+YSEDYCY
Sbjct: 72  SLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTIIDEDYQDDEYSEDYCY 131

Query: 121 YYSDD----DDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFM 180
           YYSDD    DD SSYDSEESSTES+  N  K KK  V EEEEEKDVLVVGGCKRCLMYFM
Sbjct: 132 YYSDDHEEEDDISSYDSEESSTEST--NMRKKKKTFVVEEEEEKDVLVVGGCKRCLMYFM 191

Query: 181 VPKHLEDCPKC-NGQLLHFDRS 188
           VPKHL+DCPKC NGQLLHFDRS
Sbjct: 192 VPKHLQDCPKCNNGQLLHFDRS 197

[Close]

BLAST of Lsi07G003680 vs. TrEMBL
Match: A0A061E5U3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008431 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-45
Identity = 116/198 (58.59%), Postives = 141/198 (71.21%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLN 60
           M TIT +LE SL+ CSL+ H + +++S    +          D+N +P+++   TSL+LN
Sbjct: 6   METITASLERSLQNCSLN-HERRSSRSGGGGEQGIIRRSSTSDDNNLPTTV-SDTSLELN 65

Query: 61  SHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE--DDQYSEDYCYYYSDDDDE 120
           SHLSLPYHWEQCLDLKTGEIYYINWR+GMKAKEDPR+  E   D YSE+      +DDD+
Sbjct: 66  SHLSLPYHWEQCLDLKTGEIYYINWRDGMKAKEDPRTAAEYSGDFYSEE---EEEEDDDD 125

Query: 121 SSYDSEESSTESS---------NNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPK 180
           SSYDSEESS+ESS         NNNNN N   V   E+++ +VLVV GCK CLMYFMVPK
Sbjct: 126 SSYDSEESSSESSPSSRERAHYNNNNNNNHHRV---EKDKDNVLVVAGCKSCLMYFMVPK 185

Query: 181 HLEDCPKCNGQLLHFDRS 188
            +EDCPKCNGQLLHFDRS
Sbjct: 186 QVEDCPKCNGQLLHFDRS 195

[Close]

BLAST of Lsi07G003680 vs. TrEMBL
Match: B9RFX1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44
Identity = 117/199 (58.79%), Postives = 140/199 (70.35%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSH-----LQTTTQSISSSDSSN----NDNDDDDDNNKI---P 60
           M TIT +LE SL+ CSL+ H     L    +  SSSD ++       +D + NN +    
Sbjct: 6   MATITASLERSLQNCSLNHHQSRGVLGGAGERSSSSDDADFGAAQQQEDQNHNNNLNLPT 65

Query: 61  SSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTREDDQYSEDY 120
           S+    T+L+LNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR T+E   YS D 
Sbjct: 66  SNSSTDTTLELNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRVTQE---YSGD- 125

Query: 121 CYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVP 180
             YYS  +DESSYDSEESS+ESS  ++ ++  +    E++E  VLVV GCK CLMYFMVP
Sbjct: 126 --YYS--EDESSYDSEESSSESSPPSSREH--YTSRGEQKEDHVLVVAGCKSCLMYFMVP 185

Query: 181 KHLEDCPKCNGQLLHFDRS 188
           K +EDCPKCNGQLLHFDRS
Sbjct: 186 KQVEDCPKCNGQLLHFDRS 194

[Close]

BLAST of Lsi07G003680 vs. TrEMBL
Match: V4TQC8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032280mg PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.1e-44
Identity = 111/197 (56.35%), Postives = 137/197 (69.54%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTTTQS-------ISSSDSSNNDNDDDDDNNKIPSSIHQ 60
           M TITE+LE SL+ CSL++H + +  +        SSSD   N+NDD  + +        
Sbjct: 105 MSTITESLERSLRNCSLNNHQRRSGVNGGRGIGRSSSSDDHINNNDDLQNGD-------- 164

Query: 61  STSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE---DDQYSEDYCY 120
             +L+LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR+T E   D  YSE+   
Sbjct: 165 -ATLELNSHMSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRTTAESSGDFYYSEE--- 224

Query: 121 YYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKH 180
              D+D++SSYDSEES++ESS   ++K       ++    +VLVV GCK CLMYFMVPK 
Sbjct: 225 --EDEDEDSSYDSEESTSESSPAPSSKEHYHRSVKDNNNNNVLVVAGCKSCLMYFMVPKQ 284

Query: 181 LEDCPKCNGQLLHFDRS 188
           +EDCPKCNGQLLHFDRS
Sbjct: 285 VEDCPKCNGQLLHFDRS 287

[Close]

BLAST of Lsi07G003680 vs. TrEMBL
Match: A0A067GU35_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029456mg PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.1e-44
Identity = 111/197 (56.35%), Postives = 137/197 (69.54%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTTTQS-------ISSSDSSNNDNDDDDDNNKIPSSIHQ 60
           M TITE+LE SL+ CSL++H + +  +        SSSD   N+NDD  + +        
Sbjct: 6   MSTITESLERSLRNCSLNNHQRRSGVNGGRGIGRSSSSDDHINNNDDLQNGD-------- 65

Query: 61  STSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE---DDQYSEDYCY 120
             +L+LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR+T E   D  YSE+   
Sbjct: 66  -ATLELNSHMSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRTTAESSGDFYYSEE--- 125

Query: 121 YYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKH 180
              D+D++SSYDSEES++ESS   ++K       ++    +VLVV GCK CLMYFMVPK 
Sbjct: 126 --EDEDEDSSYDSEESTSESSPAPSSKEHYHRSVKDNNNNNVLVVAGCKSCLMYFMVPKQ 185

Query: 181 LEDCPKCNGQLLHFDRS 188
           +EDCPKCNGQLLHFDRS
Sbjct: 186 VEDCPKCNGQLLHFDRS 188

[Close]

BLAST of Lsi07G003680 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-37
Identity = 101/204 (49.51%), Postives = 118/204 (57.84%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLN 60
           M TITE+LE S+  CSL+   +          SSN       D            +L+LN
Sbjct: 6   METITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPISDR-----------TLELN 65

Query: 61  SHLSLPYHWEQCLDLK---------------TGEIYYINWRNGMKAKEDPRSTREDDQYS 120
           SHLSLP HWEQCLDLK               TGEIYYINW+NGM+ KEDPR     D  S
Sbjct: 66  SHLSLPCHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMNADPDS 125

Query: 121 EDYCYYYSDDDDESSYDSEESSTESS---NNNNNKNKKFVVEEEEEEKDVLVVGGCKRCL 180
            D       ++D S YDSEESS+ESS     N+ + ++   EEEEEE+DVLVV GCK C 
Sbjct: 126 GDSYGTVCSEEDSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAGCKACF 185

Query: 181 MYFMVPKHLEDCPKCNGQLLHFDR 187
           MYFMVPK +EDCPKC  QLLHFDR
Sbjct: 186 MYFMVPKLVEDCPKCAAQLLHFDR 198

[Close]

BLAST of Lsi07G003680 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein)

HSP 1 Score: 132.9 bits (333), Expect = 2.1e-31
Identity = 87/191 (45.55%), Postives = 111/191 (58.12%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLN 60
           M  ITE LE S++ CSL     +       SD              IP S      L+L+
Sbjct: 1   MADITEYLERSMQNCSLIDRRSSMGDGFGMSDEH------------IPIS---DRFLELS 60

Query: 61  SHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTREDDQYS-----EDYCYYYSDD 120
           SH S+P H EQCLDLKTGEIYY +W +GM+ KEDPR +     Y+     E     +S +
Sbjct: 61  SHFSVPSHLEQCLDLKTGEIYYRSWNSGMRVKEDPRKSMSRGNYADQSSGESSGTVFSSE 120

Query: 121 DDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCP 180
           +  S Y+SEESS+ESS ++   +K      EE+++DVLVV GCK CLMYFMVPK  +DCP
Sbjct: 121 EVSSYYESEESSSESSPSSRKYHK------EEQDEDVLVVAGCKACLMYFMVPKLFKDCP 170

Query: 181 KCNGQLLHFDR 187
           KC  QLLHFD+
Sbjct: 181 KCATQLLHFDQ 170

[Close]

BLAST of Lsi07G003680 vs. NCBI nr
Match: gi|659108282|ref|XP_008454114.1| (PREDICTED: knob-associated histidine-rich protein-like [Cucumis melo])

HSP 1 Score: 251.9 bits (642), Expect = 8.7e-64
Identity = 148/212 (69.81%), Postives = 160/212 (75.47%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSS--------HLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIH 60
           MGTITEALECSL+KCSL+         H QT  Q + SS SS++ +     ++ I    H
Sbjct: 12  MGTITEALECSLQKCSLTHNHHHHHHHHHQTHQQPLISSSSSSSSSSSSSSSS-IHQHHH 71

Query: 61  QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-----REDDQYSED 120
           QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST      +DD+YSED
Sbjct: 72  QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTIIDEDYQDDEYSED 131

Query: 121 YCYYYSD--------DDDESSYDSEESSTESSN---NNNNKNKKFVVEEEEEEKDVLVVG 180
           YCYYYSD        DDD SSYDSEESSTES+N       K K FVVEE EEEKDVLVVG
Sbjct: 132 YCYYYSDENHEEEEEDDDISSYDSEESSTESTNMMMMKKKKKKTFVVEEGEEEKDVLVVG 191

Query: 181 GCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS 188
           GCKRCLMYFMVPKHL+DCPKC NGQLLHFDRS
Sbjct: 192 GCKRCLMYFMVPKHLQDCPKCNNGQLLHFDRS 222

[Close]

BLAST of Lsi07G003680 vs. NCBI nr
Match: gi|700197830|gb|KGN52988.1| (hypothetical protein Csa_4G009890 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 6.2e-62
Identity = 146/202 (72.28%), Postives = 154/202 (76.24%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQ-----ST 60
           MGTITEALECSL+K    SH Q    S SSS S ++ +          SSIHQ     ST
Sbjct: 12  MGTITEALECSLQK----SHQQPLISSSSSSSSFSSSS----------SSIHQHQHQQST 71

Query: 61  SLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-----REDDQYSEDYCY 120
           SLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST      +DD+YSEDYCY
Sbjct: 72  SLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTIIDEDYQDDEYSEDYCY 131

Query: 121 YYSDD----DDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFM 180
           YYSDD    DD SSYDSEESSTES+  N  K KK  V EEEEEKDVLVVGGCKRCLMYFM
Sbjct: 132 YYSDDHEEEDDISSYDSEESSTEST--NMRKKKKTFVVEEEEEKDVLVVGGCKRCLMYFM 191

Query: 181 VPKHLEDCPKC-NGQLLHFDRS 188
           VPKHL+DCPKC NGQLLHFDRS
Sbjct: 192 VPKHLQDCPKCNNGQLLHFDRS 197

[Close]

BLAST of Lsi07G003680 vs. NCBI nr
Match: gi|778689802|ref|XP_004152315.2| (PREDICTED: uncharacterized protein LOC101222996, partial [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 6.7e-56
Identity = 132/184 (71.74%), Postives = 140/184 (76.09%), Query Frame = 1


Query: 19  SHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQ-----STSLDLNSHLSLPYHWEQCL 78
           +H Q    S SSS S ++ +          SSIHQ     STSLDLNSHLSLPYHWEQCL
Sbjct: 2   AHQQPLISSSSSSSSFSSSS----------SSIHQHQHQQSTSLDLNSHLSLPYHWEQCL 61

Query: 79  DLKTGEIYYINWRNGMKAKEDPRST-----REDDQYSEDYCYYYSDD----DDESSYDSE 138
           DLKTGEIYYINWRNGMKAKEDPRST      +DD+YSEDYCYYYSDD    DD SSYDSE
Sbjct: 62  DLKTGEIYYINWRNGMKAKEDPRSTIIDEDYQDDEYSEDYCYYYSDDHEEEDDISSYDSE 121

Query: 139 ESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLH 188
           ESSTES+  N  K KK  V EEEEEKDVLVVGGCKRCLMYFMVPKHL+DCPKC NGQLLH
Sbjct: 122 ESSTEST--NMRKKKKTFVVEEEEEKDVLVVGGCKRCLMYFMVPKHLQDCPKCNNGQLLH 173

[Close]

BLAST of Lsi07G003680 vs. NCBI nr
Match: gi|590691662|ref|XP_007043845.1| (Uncharacterized protein TCM_008431 [Theobroma cacao])

HSP 1 Score: 191.0 bits (484), Expect = 1.8e-45
Identity = 116/198 (58.59%), Postives = 141/198 (71.21%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLN 60
           M TIT +LE SL+ CSL+ H + +++S    +          D+N +P+++   TSL+LN
Sbjct: 6   METITASLERSLQNCSLN-HERRSSRSGGGGEQGIIRRSSTSDDNNLPTTV-SDTSLELN 65

Query: 61  SHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE--DDQYSEDYCYYYSDDDDE 120
           SHLSLPYHWEQCLDLKTGEIYYINWR+GMKAKEDPR+  E   D YSE+      +DDD+
Sbjct: 66  SHLSLPYHWEQCLDLKTGEIYYINWRDGMKAKEDPRTAAEYSGDFYSEE---EEEEDDDD 125

Query: 121 SSYDSEESSTESS---------NNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPK 180
           SSYDSEESS+ESS         NNNNN N   V   E+++ +VLVV GCK CLMYFMVPK
Sbjct: 126 SSYDSEESSSESSPSSRERAHYNNNNNNNHHRV---EKDKDNVLVVAGCKSCLMYFMVPK 185

Query: 181 HLEDCPKCNGQLLHFDRS 188
            +EDCPKCNGQLLHFDRS
Sbjct: 186 QVEDCPKCNGQLLHFDRS 195

[Close]

BLAST of Lsi07G003680 vs. NCBI nr
Match: gi|470149188|ref|XP_004310123.1| (PREDICTED: uncharacterized protein LOC101297903 [Fragaria vesca subsp. vesca])

HSP 1 Score: 189.5 bits (480), Expect = 5.3e-45
Identity = 114/211 (54.03%), Postives = 147/211 (69.67%), Query Frame = 1


Query: 1   MGTITEALECSLKKCSLSSHLQTT-------TQSIS----------SSDSSNNDNDDDDD 60
           M TI  +LE S++ CSL+ H QTT       +QS            SS +S+  +D    
Sbjct: 6   MATIAASLERSMQNCSLNHHRQTTIGDGGNGSQSSQGSSHVGMRGRSSSTSSTSDDAAQQ 65

Query: 61  NNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTREDDQ 120
           N   P++ ++ T+L+LNS++SLPYHWEQCLDLKTGEIYYINWRNGMKA+EDPR+T    Q
Sbjct: 66  NQFTPNNNNEDTALELNSNVSLPYHWEQCLDLKTGEIYYINWRNGMKAREDPRTTA---Q 125

Query: 121 YSEDYCYYY--SDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKD-----VLVVG 180
           YS D CYY    DDDD+SSYDSEESSTESS +++ + + +  +++E +++     VLVV 
Sbjct: 126 YSRD-CYYSDDDDDDDDSSYDSEESSTESSPSSSREREPYNNQQKESDQNNKQDHVLVVA 185

Query: 181 GCKRCLMYFMVPKHLEDCPKCNGQLLHFDRS 188
           GCK CLMY+MVPK  EDCPKC+GQLLHFDRS
Sbjct: 186 GCKSCLMYYMVPKQHEDCPKCSGQLLHFDRS 212

The following BLAST results are available for this feature:

BLAST of Lsi07G003680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G003680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTY3_CUCSA	4.3e-62	72.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G009890 PE=4 SV=1	[more]
A0A061E5U3_THECC	1.3e-45	58.59	Uncharacterized protein OS=Theobroma cacao GN=TCM_008431 PE=4 SV=1	[more]
B9RFX1_RICCO	1.4e-44	58.79	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1437780 PE=4 SV=1	[more]
V4TQC8_9ROSI	9.1e-44	56.35	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032280mg PE=4 SV=1	[more]
A0A067GU35_CITSI	9.1e-44	56.35	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029456mg PE=4 SV=1	[more]

BLAST of Lsi07G003680 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33510.2	1.1e-37	49.51	unknown protein	[more]
AT1G28070.1	2.1e-31	45.55	unknown protein	[more]

BLAST of Lsi07G003680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108282\|ref\|XP_008454114.1\|	8.7e-64	69.81	PREDICTED: knob-associated histidine-rich protein-like [Cucumis melo]	[more]
gi\|700197830\|gb\|KGN52988.1\|	6.2e-62	72.28	hypothetical protein Csa_4G009890 [Cucumis sativus]	[more]
gi\|778689802\|ref\|XP_004152315.2\|	6.7e-56	71.74	PREDICTED: uncharacterized protein LOC101222996, partial [Cucumis sativus]	[more]
gi\|590691662\|ref\|XP_007043845.1\|	1.8e-45	58.59	Uncharacterized protein TCM_008431 [Theobroma cacao]	[more]
gi\|470149188\|ref\|XP_004310123.1\|	5.3e-45	54.03	PREDICTED: uncharacterized protein LOC101297903 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001202	WW_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G003680.1	Lsi07G003680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	unknown	SSF51045	WW domain	coord: 61..96 score: 5.5
None	No IPR available	GENE3D	G3DSA:2.20.70.10		coord: 60..96 score: 2.
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 1..187 score: 6.1
None	No IPR available	PANTHER	PTHR14791:SF27	SUBFAMILY NOT NAMED	coord: 1..187 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G003680	Csa4G009890	Cucumber (Chinese Long) v2	culsiB312
Lsi07G003680	CSPI04G02550	Wild cucumber (PI 183967)	cpilsiB311
Lsi07G003680	Cucsa.095570	Cucumber (Gy14) v1	cgylsiB113
Lsi07G003680	CmaCh06G017070	Cucurbita maxima (Rimu)	cmalsiB773
Lsi07G003680	CmoCh06G016990	Cucurbita moschata (Rifu)	cmolsiB764
Lsi07G003680	MELO3C017796	Melon (DHL92) v3.5.1	lsimeB447
Lsi07G003680	ClCG07G011730	Watermelon (Charleston Gray)	lsiwcgB406
Lsi07G003680	MELO3C017796.2	Melon (DHL92) v3.6.1	lsimedB465
Lsi07G003680	Cla97C07G138460	Watermelon (97103) v2	lsiwmbB405
Lsi07G003680	Bhi01G002890	Wax gourd	lsiwgoB548
Lsi07G003680	Cp4.1LG03g13210	Cucurbita pepo (Zucchini)	cpelsiB516
Lsi07G003680	CsGy4G002420	Cucumber (Gy14) v2	cgyblsiB285
Lsi07G003680	Carg06566	Silver-seed gourd	carlsiB109
Lsi07G003680	Carg15429	Silver-seed gourd	carlsiB635
Lsi07G003680	CsaV3_4G002470	Cucumber (Chinese Long) v3	cuclsiB331

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G003680	Cucurbita maxima (Rimu)	cmalsiB256
Lsi07G003680	Cucurbita moschata (Rifu)	cmolsiB244
Lsi07G003680	Cucurbita pepo (Zucchini)	cpelsiB726
Lsi07G003680	Watermelon (97103) v1	lsiwmB438