Cucsa.095570 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACAATCACAGAAGCTTTAGAATGCTCTCTTCAAAAATGTTCCTTAACCCATAATCATCATCATCATCATCATCATCATCAAACTCATCAAGCTCATCAACAACCTCTAATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTATTCATCAGCATCAGCATCAGCAATCAACCTCTTTGGATCTCAACTCTCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGGTTTTTTCCCTTCCTCTTTTCCTTTTTTCATTTATATATTCTTCCTAAGAATATTAAACAAAAAAACTAGGGTTTGAGTTTCACCAAAAATCCCTTTCTGAACTTTTTCTATTGTTTGGTTCTACAAGTCATGACATGGGCTTGGGTTTGAATTTGAAGAGGAATAACCTATATGTGGATTTTTTTAAAAAAGATTATGTAAAAAAAATAGCTTTTTGAACTTTTTTTCTTGTTTGGTTCTCTAATTCATGAAGTGGGTTAGGGTTTGAATTTGAAGTGGAACAATATATATGTGGATTTTTTAAAAAAAATTATATACACAAAAATCCCCTTTTTAAACTTGTTTGTTTCTACAAATTAATCAAGTGGGTTAGGGTTTGAATTTGAAAAGGAATAATATATATTATGTGGAACTATAATTTTTGTGATTTTCTTTTTGGTTGTTGATTTGTAGACAGGGGAGATATACTACATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAATAATAGATGAAGATTATCAAGATGATGAATATAGTGAAGATTACTGTTATTACTACTCAGACGACCATGAGGAGGAGGATGATATTAGCTCTTACGACAGCGAAGAGTCGTCGACAGAATCGACAAACATGAGGAAGAAGAAGAAGACGTTTGTGGTTGAAGAAGAAGAAGAAAAAGATGTATTGGTGGTTGGAGGCTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAGCATCTTCAAGATTGCCCTAAATGCAATAATGGTCAGCTTCTCCATTTTGATCGCTCTCAAAATCACATTATTCCATGAACTCTTATTATTAGACAAATTAATCTTTTCAATTTCATTCCCTTTTTTCTTCTTCATGAGAAAAAATAGAGGAAGAAAGAGGAAGAAATTATATATAAAAAAAAAAGAACAAAAATTCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGGTTTGAAATTGTTTCCATGTGTATTTGTCAGAAGGGGGAGGCAAACGAGTTTTGGTTTTAGTTTTTTTTTTATTATTTATAATTATTATTTCAATTTTTCTTAGCTTTTTATTATTATTATTATTTTTGTTTAATTTTGAAATGTAATGGAAAATGAAAGATTGAGAATCATGTAATGGGTG ATGGGAACAATCACAGAAGCTTTAGAATGCTCTCTTCAAAAATGTTCCTTAACCcataatcatcatcatcatcatcatcatcatcaAACTCATCAAGCTCATCAACAACCTCTAATttcttcttcttcttcttcttcttctttttcttcttcttcttcttctATTCATCAGCATCAGCATCAGCAATCAACCTCTTTGGATCTCAACTCTCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGACAGGGGAGATATACTACATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAATAATAGATGAAGATTATCAAGATGATGAATATAGTGAAGATTACTGTTATTACTACTCAGACGACCATGAGGAGGAGGATGATATTAGCTCTTACGACAGCGAAGAGTCGTCGACAGAATCGACAAACATGAGGAAGAAGAAGAAGACGTTTGTGGTTGAAGAAGAAGAAGAAAAAGATGTATTGGTGGTTGGAGGCTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAGCATCTTCAAGATTGCCCTAAATGCAATAATGGTCAGCTTCTCCATTTTGATCGCTCTCAAAATCACATTATTCCATGAACTCTTATTATTAGACAAATTAATCTTTTCAATTTCATTCCCTTTTTTCTTCTTCATGAGAAAAAATAGAGGAAGAAAGAGGAAGaaattatatataaaaaaaaaaGAACAAAAATTCCtctttctttctttctttctttctttctttctttctttctttTTGGTTTGAAATTGTTTCCATGTGTATTTGTCAGAAGGGGGAGGCAAACGAGttttggttttagttttttttttattatttataattattatttcaatttttcttagctttttattattattattatttttgtttAATTTTGAAATGTAATGGAAAATGAAAGATTGAGAATCATGTAATGGGTG ATGGGAACAATCACAGAAGCTTTAGAATGCTCTCTTCAAAAATGTTCCTTAACCCATAATCATCATCATCATCATCATCATCATCAAACTCATCAAGCTCATCAACAACCTCTAATTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTATTCATCAGCATCAGCATCAGCAATCAACCTCTTTGGATCTCAACTCTCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTGATTTAAAGACAGGGGAGATATACTACATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAATAATAGATGAAGATTATCAAGATGATGAATATAGTGAAGATTACTGTTATTACTACTCAGACGACCATGAGGAGGAGGATGATATTAGCTCTTACGACAGCGAAGAGTCGTCGACAGAATCGACAAACATGAGGAAGAAGAAGAAGACGTTTGTGGTTGAAGAAGAAGAAGAAAAAGATGTATTGGTGGTTGGAGGCTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAGCATCTTCAAGATTGCCCTAAATGCAATAATGGTCAGCTTCTCCATTTTGATCGCTCTCAAAATCACATTATTCCATGA MGTITEALECSLQKCSLTHNHHHHHHHHQTHQAHQQPLISSSSSSSSFSSSSSSIHQHQHQQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTIIDEDYQDDEYSEDYCYYYSDDHEEEDDISSYDSEESSTESTNMRKKKKTFVVEEEEEKDVLVVGGCKRCLMYFMVPKHLQDCPKCNNGQLLHFDRSQNHIIP*
BLAST of Cucsa.095570 vs. TrEMBL
Match: A0A0A0KTY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G009890 PE=4 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 9.4e-106 Identity = 191/210 (90.95%), Postives = 192/210 (91.43%), Query Frame = 1
BLAST of Cucsa.095570 vs. TrEMBL
Match: W9RJY3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013172 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 4.4e-55 Identity = 121/228 (53.07%), Postives = 148/228 (64.91%), Query Frame = 1
BLAST of Cucsa.095570 vs. TrEMBL
Match: M5XR51_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019268mg PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 9.0e-48 Identity = 120/236 (50.85%), Postives = 142/236 (60.17%), Query Frame = 1
BLAST of Cucsa.095570 vs. TrEMBL
Match: B9GZB4_POPTR (Humj1 family protein OS=Populus trichocarpa GN=POPTR_0003s16420g PE=4 SV=2) HSP 1 Score: 198.4 bits (503), Expect = 9.0e-48 Identity = 113/206 (54.85%), Postives = 134/206 (65.05%), Query Frame = 1
BLAST of Cucsa.095570 vs. TrEMBL
Match: A0A067JTH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23118 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.2e-47 Identity = 109/206 (52.91%), Postives = 134/206 (65.05%), Query Frame = 1
BLAST of Cucsa.095570 vs. TAIR10
Match: AT2G33510.2 (AT2G33510.2 unknown protein) HSP 1 Score: 161.8 bits (408), Expect = 4.7e-40 Identity = 101/223 (45.29%), Postives = 120/223 (53.81%), Query Frame = 1
BLAST of Cucsa.095570 vs. TAIR10
Match: AT1G28070.1 (AT1G28070.1 unknown protein) HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35 Identity = 89/203 (43.84%), Postives = 112/203 (55.17%), Query Frame = 1
BLAST of Cucsa.095570 vs. NCBI nr
Match: gi|659108282|ref|XP_008454114.1| (PREDICTED: knob-associated histidine-rich protein-like [Cucumis melo]) HSP 1 Score: 401.4 bits (1030), Expect = 1.0e-108 Identity = 200/220 (90.91%), Postives = 204/220 (92.73%), Query Frame = 1
BLAST of Cucsa.095570 vs. NCBI nr
Match: gi|700197830|gb|KGN52988.1| (hypothetical protein Csa_4G009890 [Cucumis sativus]) HSP 1 Score: 391.0 bits (1003), Expect = 1.4e-105 Identity = 191/210 (90.95%), Postives = 192/210 (91.43%), Query Frame = 1
BLAST of Cucsa.095570 vs. NCBI nr
Match: gi|778689802|ref|XP_004152315.2| (PREDICTED: uncharacterized protein LOC101222996, partial [Cucumis sativus]) HSP 1 Score: 378.3 bits (970), Expect = 9.1e-102 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Cucsa.095570 vs. NCBI nr
Match: gi|703112217|ref|XP_010100060.1| (hypothetical protein L484_013172 [Morus notabilis]) HSP 1 Score: 222.6 bits (566), Expect = 6.4e-55 Identity = 121/228 (53.07%), Postives = 148/228 (64.91%), Query Frame = 1
BLAST of Cucsa.095570 vs. NCBI nr
Match: gi|502100269|ref|XP_004491675.1| (PREDICTED: myb-like protein AA [Cicer arietinum]) HSP 1 Score: 209.5 bits (532), Expect = 5.6e-51 Identity = 109/218 (50.00%), Postives = 147/218 (67.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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