Lsi07G003190 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G003190
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPolyadenylate-binding protein-interacting protein 11
Locationchr07 : 3403039 .. 3408062 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGGGAGGGCATATAAAGAAAAGAAAAGAAGGAAATGCATGATGCATGGTGATTGTTCATTCATGCATGGGGTAATGGGAAGGAGATGGGTATTTTAGGAATTATGAAAAGTTTGTTTGGATGACTGAGTTTGGTGTCCCTGAAATATGTTGAGAGGAAGGGGAAGGGGGCGTACGAAAAGATTCATCTCATCGGTCATTTCTTCTGGGATGCTGTGAAAGGAGGACCCAAAAGCTAAAGCCAAACCCACTCCACCGCAATCCGACGATCTCAACGGCGGCGTAACCAACGTACAAACTCCTAATCCTTTTCTCTATCTATCTATCTACACTAATTACCAATTCATCATCGCCCTTCACAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAATAGAGGAAAGTGAGACTTTGCCTCTCTAACTTTTGTTAATTCGCACAGAGGGTTTCTCGTTTTCGTTTCGATCCTCTTCAATTTCATTTCTGCTCTCTTACTTCTTCCACTCCACGATCTCCTGCTGGGTTTCGTCGTTCACCAATGGAAATGTATTGATAAGCCCTCCTACCCCCCCTCAGGTAACAGCCAACCACTTGTTTGACCGCTTTTTCTTTTTCTTTATTTCTTTATACCGCGACGGATATCTCGATCATACGATTCATTTGATTTTTCAGAATAAGATTGCAAAAACAACGATCTTGTTGCATAAACCTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAACACCATCGTTTCCTCCGATTCTAATGACCCCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATTAATGCAGAATCCGACTTCCATCCCAACGCCAATGATCAGAATATACAGAAGAAGGTACATCTTCAGGACAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAAGGCTCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGCCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGAATGAATCAGAGGCCTAATGGAGTCATAAATGGAACCGATGGAGGGGACACCTTTAAGAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCACTAGCCAAAAACTTTTCTGGTTACTTCGGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTACTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAGTCGAAGGGTATGTGGGGATGTTTGTTTTGTTTGAAAGATGTGGAATGCTTATTTACACTTATTATTAAGCTTTGAATGCCGTGCACTTTGTTTGATTTCTCGAGAACCAAACCCCTCAGACTTAACATGCCTGATGGTTTTGTATGGTGGAAGTATTGGAGTTTGTATATTTTCAGGTGTTCTTTTTTTAAGTTCTGTGAACCTGCTATAAGAGTATTATTTGATCGGACATTTTAGTACTAGTGGACTCTTGAGAAATCTCTTCTATTTCTTTTGTTTATGTTGCATAAATCTCATATTGATGTCTATTTTATTTATTTATTTTGCTTCATTCGTTTTACTTAGAAGAAGAATGGTTTTAGTCAAGGGAGACGAAGGATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATTGATCAGCAGGTAAGAGGCCTCCACCCCCAAACTCTCCTGCTCATGTGCGTTGCCTTGTCCTTTTTTACCTATTCATTTTTGGATCATGGAAATGGATTGTAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTGACTGGTTTTTCTCTTTTCTTTTTTTCCATTTGATATGATTTTTGGCATCTTACTGCTAGCTTAATGTTGTCTTCTTCAATAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGGTACAATCCCAAGTTCAGTTTATTCGTAGATACATTTCCTACCATGATATCATATTTAATTTACTTCATGCTGGCAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTCTATCCAGTCAGGGTGCTACCCTCAAAAACTGCAATAGCACCGGTCAATCCTGACTTTTTACCCAGGGTAATTGACTGCCCTCAATGGCATTCATCTATTTTTACTACATTCTAATTTGTTGTTAGCAATGCTGTCAACTCATTTTAATTTATTCTATTTCTTCTCTTGAAATTGGCTTTCTTGTGTTTTATTGTTTCTAGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTGGTTTGGAAGTGAGAAATCTCTGAATGTATTTGGGAACTGTGTTTTTGGAAGAGGAGAAGATGAAAGAACTTCAATATTGTCGATTGCTAGATTGACTGTTTTCATGTCATGCAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTCTGCACTTTCTCGTATAACAGATGTCATATTTCTTCATACTTTTATTAGATTCTCTTTACAATGCTTTCATATCCTCTGGTTAACTTAATCCATGTTATCTGTTAACCCGTGTAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCTACTCGTATAGCATTTGTTGAGTTTACAATGGTAAATCCTGTTCTATTCCACTGATTTTGTTGCTTTTTTTGTAACCTTTCCTCCCGCCATGTTTATAACCCTCTCCCTCTCTCTTTGGGTTGGTGTGGGGTAAGGGTGGGGGTGGGCTACTAGTCTGCTGTGGTTCTTGTACTCTTACCCTCCTCCCTCACCCGTACACTTTGCATTGGTTGGGTATAGAATGCATCTACAGTACCTGCTGTACTTATCATATCTATCAGTAAACTTAATAATGGGGGTAGTTTTCCTTATCAACCAGTTTGTTGTAGTTCCTCTATTTACCGTTCACCAATACATCTTTGTTTTTGTGGTGTAAAGAATGCATTTAGAGTACCTGCTTCACTTATTTTATCTATCAGTGAACTTAATGATGGACAGCACTTGATTGATGTCTTTAAGGTTAATTTCACTGCTGTCGAGCAGTGTCAAAATATCATTGCAATGCATGTTTCATCTTGTAAAATCATCGAATATATGATCCTTATCATTTGAGTGACTTTAGTGTTTCATGTTTGTGAATAACAAAGCATTAGCTATGCCCGAAAAGTCTTTTTGGAGAATAGTGGTGTTTTCCCATTTAGATGCACGAATGTTTACCTGTGCAGTCACATGAATGTTATTATGTTTGGCTGTAGCCACCCCTCCATAGCTTGCATGAAAATGTGTGCATTTGTTTTTAATTTGCAGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTCCCAATAAGGTTATTATAGTTCATTCTTGTTTCCTTTTCTGGTATTCGGCATTTTGAAAAATGTGTTGTGTTTTTGTTCTGAAAGGTATAACAATTCTGACTCTTATGGGTTCGTTTTCAGGGTGAGCCCGTCAAAGACCCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGAATGCTCCCTGCATCTGTCCCATGTTGGTCTGGTGCTCAATAGATATATTTATATATATTGCATATATATATATTATGGTTATAGAGATATATTCAGAAGGGGTTGTGGGCTTTGGTGATGCATGGATCCGCTGCAGTGGAGTTGGTACCTTTTTGTACCTTGAACTAGGTGTTGTTGGTGAATGAGATATTTGTTTAGTTTTTTTTTATAGAGTGGATGGCATTTTGAGGCTCTTAGTCGTTTATCTCTGGTGATGTTATGGTGGATGCACCGGTGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGGAACTTTCTTTCAATGTTTCTAACTGGAAACTCTTAATCAACTCTCCGCTCTTTACTCTC

mRNA sequence

AAATGGGAGGGCATATAAAGAAAAGAAAAGAAGGAAATGCATGATGCATGGTGATTGTTCATTCATGCATGGGGTAATGGGAAGGAGATGGGTATTTTAGGAATTATGAAAAGTTTGTTTGGATGACTGAGTTTGGTGTCCCTGAAATATGTTGAGAGGAAGGGGAAGGGGGCGTACGAAAAGATTCATCTCATCGGTCATTTCTTCTGGGATGCTGTGAAAGGAGGACCCAAAAGCTAAAGCCAAACCCACTCCACCGCAATCCGACGATCTCAACGGCGGCGTAACCAACAGGAAAGTGAGACTTTGCCTCTCTAACTTTTGTTAATTCGCACAGAGGGTTTCTCGTTTTCGTTTCGATCCTCTTCAATTTCATTTCTGCTCTCTTACTTCTTCCACTCCACGATCTCCTGCTGGGTTTCGTCGTTCACCAATGGAAATGTATTGATAAGCCCTCCTACCCCCCCTCAGAATAAGATTGCAAAAACAACGATCTTGTTGCATAAACCTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAACACCATCGTTTCCTCCGATTCTAATGACCCCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATTAATGCAGAATCCGACTTCCATCCCAACGCCAATGATCAGAATATACAGAAGAAGGTACATCTTCAGGACAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAAGGCTCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGCCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGAATGAATCAGAGGCCTAATGGAGTCATAAATGGAACCGATGGAGGGGACACCTTTAAGAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCACTAGCCAAAAACTTTTCTGGTTACTTCGGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTACTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAGTCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGAAGGATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTCTATCCAGTCAGGGTGCTACCCTCAAAAACTGCAATAGCACCGGTCAATCCTGACTTTTTACCCAGGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTGGTTTGGAAGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCTACTCGTATAGCATTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTCCCAATAAGGGTGAGCCCGTCAAAGACCCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGAATGCTCCCTGCATCTGTCCCATGTTGGTCTGGTGCTCAATAGATATATTTATATATATTGCATATATATATATTATGGTTATAGAGATATATTCAGAAGGGGTTGTGGGCTTTGGTGATGCATGGATCCGCTGCAGTGGAGTTGGTACCTTTTTGTACCTTGAACTAGGTGTTGTTGGTGAATGAGATATTTGTTTAGTTTTTTTTTATAGAGTGGATGGCATTTTGAGGCTCTTAGTCGTTTATCTCTGGTGATGTTATGGTGGATGCACCGGTGGATTCTGTAGGGTTGGTCCCTGGGAACACTTGGAACTTTCTTTCAATGTTTCTAACTGGAAACTCTTAATCAACTCTCCGCTCTTTACTCTC

Coding sequence (CDS)

ATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTGGAAAACACCATCGTTTCCTCCGATTCTAATGACCCCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATTAATGCAGAATCCGACTTCCATCCCAACGCCAATGATCAGAATATACAGAAGAAGGTACATCTTCAGGACAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAAGGCTCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGCCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGAATGAATCAGAGGCCTAATGGAGTCATAAATGGAACCGATGGAGGGGACACCTTTAAGAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCACTAGCCAAAAACTTTTCTGGTTACTTCGGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTACTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAGTCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGAAGGATGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGGAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTCTATCCAGTCAGGGTGCTACCCTCAAAAACTGCAATAGCACCGGTCAATCCTGACTTTTTACCCAGGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTGGTTTGGAAGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCTACTCGTATAGCATTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTCCCAATAAGGGTGAGCCCGTCAAAGACCCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGA

Protein sequence

MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQNIQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Homology
[Close]
BLAST of Lsi07G003190 vs. Swiss-Prot
Match: CID11_ARATH (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana GN=CID11 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-109
Identity = 206/288 (71.53%), Postives = 235/288 (81.60%), Query Frame = 1 

Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFS-----GYFGGAGLGYTND-F 180
           +G DGG++FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F  AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDY 360
           APVNP FLPR++DEREMC+RTIYCTNIDKK    VTQ++VK+FFES CGEV RLRLLGDY
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKK----VTQSDVKIFFESFCGEVYRLRLLGDY 310

Query: 361 HHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 403
            HSTRIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 QHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]
BLAST of Lsi07G003190 vs. Swiss-Prot
Match: CID12_ARATH (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana GN=CID12 PE=1 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.4e-106
Identity = 206/329 (62.61%), Postives = 248/329 (75.38%), Query Frame = 1 

Query: 79  LPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVINGTDGGDTFKRDMRDLEE 138
           L SP+  + +   ++G  +N          G G++      +  +DGG++FKRDMR+L E
Sbjct: 18  LISPSPPSSVTSQESGASSNNDH------GGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 139 LLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNNSRRKKNGFSQG 198
           LLSKLNPMA+EF+PPSL K     F G      N F+   N   NE  + RRKK+   QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 199 RRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHF 258
           +RRMN + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 259 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYC 318
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 319 TNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCS 378
           TNIDKK    +TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCS
Sbjct: 258 TNIDKK----LTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCS 317

Query: 379 GVVLGSLPIRVSPSKTPVRPRS-PRAQLN 407
           GV+LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 318 GVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]
BLAST of Lsi07G003190 vs. Swiss-Prot
Match: CID10_ARATH (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana GN=CID10 PE=2 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.1e-103
Identity = 220/408 (53.92%), Postives = 277/408 (67.89%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSND----PKDVENQKPKNDSTLPINAESDFHPNA 60
           MAVAEN G K+ S  Q+L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 61  NDQNIQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRP 120
           +D+                       N  AQ  Q  NGF  NG+              R 
Sbjct: 61  DDRI----------------------NETAQKVQTLNGFSGNGE--------------RD 120

Query: 121 NGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLL 180
           N   NG         +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 181 QANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
                +   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 300
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHH 360
           VNP FLPRS+DEREMC RT+YCTNIDK++    TQ ++K FFE LCGEV RLRL GDYHH
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRI----TQIDLKGFFEMLCGEVHRLRL-GDYHH 351

Query: 361 STRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 405
            TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 QTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]
BLAST of Lsi07G003190 vs. Swiss-Prot
Match: CID9_ARATH (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana GN=CID9 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.3e-84
Identity = 164/278 (58.99%), Postives = 204/278 (73.38%), Query Frame = 1 

Query: 132 DMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEG------ 191
           DM  L  +  KLNP+A+EF P       +     A      D        + E       
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 192 -NNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVV 251
            +++ RK+  +SQGRRR+  +++  +R++  RRTVYVSDIDQ VTEE LA +F++CG+VV
Sbjct: 109 KDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVV 168

Query: 252 DCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPR 311
           DCRICGDP+S+L FAF+EF D++GA  +L+L GT+LGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 169 DCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPR 228

Query: 312 SDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 371
           S+DEREMC+RTIYCTNIDKK    V+QA+V+ FFES CGEV RLRLLGD  HSTRIAFVE
Sbjct: 229 SEDEREMCTRTIYCTNIDKK----VSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVE 288

Query: 372 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 403
           F +A+SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 FALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]
BLAST of Lsi07G003190 vs. Swiss-Prot
Match: CID8_ARATH (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana GN=CID8 PE=1 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 5.6e-84
Identity = 164/275 (59.64%), Postives = 207/275 (75.27%), Query Frame = 1 

Query: 133 MRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNN---SR 192
           M+ L  +  KLNP A+EF P S  +N +          ++DF++       +      +R
Sbjct: 50  MKKLVAMFKKLNPEAKEFFP-SYKRNTN---------QSDDFVIAIKPSGEDNKKVAINR 109

Query: 193 RKKNGFSQGRR-RMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRI 252
           R++N ++QGRR R+  + +  +R++  RRTVYVSDIDQ VTEE LA +F+SCG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 253 CGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDE 312
           CGDPNS+L FAF+EF+D++GAR++L+L GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 313 REMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMA 372
           REMCSRTIYCTN+DK      T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MA
Sbjct: 230 REMCSRTIYCTNVDK----NATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 289

Query: 373 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 404
           ESA+AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 ESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]
BLAST of Lsi07G003190 vs. TrEMBL
Match: A0A0A0KZ10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G090360 PE=4 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 7.6e-213
Identity = 385/407 (94.59%), Postives = 391/407 (96.07%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQDRAAAATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]
BLAST of Lsi07G003190 vs. TrEMBL
Match: M5XCM1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006808mg PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 3.4e-144
Identity = 284/410 (69.27%), Postives = 327/410 (79.76%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAEN        + + +NT VSSDSN   D+ N KP+ DS++ ++AE +   N +DQN
Sbjct: 1   MAVAEN--------APNFDNTAVSSDSNAQNDLANPKPRVDSSVVLSAEPNLQSNGDDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNG----QSLMVKSASGYGMNQRP 120
            Q K   Q++    T+ S+P+ N K QMGQMQNGF+TNG    Q + VKS  GYG++QR 
Sbjct: 61  PQDKFQNQEKV---TTLSVPTSNHKPQMGQMQNGFDTNGVDNHQMVAVKSG-GYGIDQRS 120

Query: 121 NGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLL 180
           NGV NG DG ++FKRDMRDLEELLSKLNPMA+EFVPPSL  N  G+    G GY N+FL+
Sbjct: 121 NGVRNGGDGDESFKRDMRDLEELLSKLNPMAKEFVPPSLVNNH-GFSLAGGFGYANNFLV 180

Query: 181 QANSLNNEGNNSRRKKNGFS-QGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLAT 240
           Q NS N  G   RRKKNG+S QGRR+   KM+  +R+EM RRTVYVSDIDQQVTEE LA 
Sbjct: 181 QINSDNANGLIGRRKKNGYSSQGRRKNYYKMSLAQREEMIRRTVYVSDIDQQVTEENLAA 240

Query: 241 VFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIA 300
           +F SCG+VVDCR+CGDPNSIL FAF+EFTDEEGAR +L+LSGT+LG+YPVRVLPSKTAIA
Sbjct: 241 LFLSCGQVVDCRVCGDPNSILRFAFVEFTDEEGARVALSLSGTMLGYYPVRVLPSKTAIA 300

Query: 301 PVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYH 360
           PVNP FLPRSDDEREMCSRTIYCTNIDKK    VTQA+VKLFFESLCGEVQRLRLLGDYH
Sbjct: 301 PVNPTFLPRSDDEREMCSRTIYCTNIDKK----VTQADVKLFFESLCGEVQRLRLLGDYH 360

Query: 361 HSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQL 406
           HSTRIAFVEFT+AESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR+ L
Sbjct: 361 HSTRIAFVEFTVAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRSPL 393

[Close]
BLAST of Lsi07G003190 vs. TrEMBL
Match: I1KB01_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G135200 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 5.1e-132
Identity = 269/411 (65.45%), Postives = 315/411 (76.64%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVG KIGS SQ+LEN++VSSDS +   VE  KP++ S   IN         +DQ 
Sbjct: 1   MAVAENVGAKIGSSSQNLENSVVSSDSGE---VEKSKPRSGS---IN---------DDQK 60

Query: 61  IQKKV-HLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +   V + QDR          + N+ AQMGQM      N          GYGMN    GV
Sbjct: 61  LNNGVFNHQDRVPGTMPVPNSNYNYNAQMGQMHANGVNN---------DGYGMN----GV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGG----AGLGYTNDFL 180
           ++G + G++FKRDMRDLEELLSKLNPMAEEFVPPSL+ N  GY  G    AG GY N+F+
Sbjct: 121 MSGENEGESFKRDMRDLEELLSKLNPMAEEFVPPSLS-NTHGYLAGPGAGAGFGYPNNFI 180

Query: 181 LQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLAT 240
           L  N  N  G  +RR+KNG++QG+RR+N+KM+  KR+EMTRRTVYVSDIDQ VTEE LA 
Sbjct: 181 LLNNFGNANGQTNRRRKNGYNQGKRRVNHKMDMEKREEMTRRTVYVSDIDQLVTEEQLAA 240

Query: 241 VFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIA 300
           +F +CG+VVDCR+CGDPNSIL FAFIEFTDEEGARA+LNLSGT+LG+YP+RVLPSKTAIA
Sbjct: 241 LFLNCGQVVDCRVCGDPNSILRFAFIEFTDEEGARAALNLSGTMLGYYPLRVLPSKTAIA 300

Query: 301 PVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYH 360
           PVNP FLPRS+DEREMCSRTIYCTNIDKK    +TQA+VK FFES+CGEVQRLRLLGDYH
Sbjct: 301 PVNPTFLPRSEDEREMCSRTIYCTNIDKK----LTQADVKHFFESICGEVQRLRLLGDYH 360

Query: 361 HSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           HSTRIAFVEFT+AESAIAAL+CSGV+LGSLPIRVSPSKTPVR R+PR  ++
Sbjct: 361 HSTRIAFVEFTVAESAIAALSCSGVILGSLPIRVSPSKTPVRSRAPRPTMH 378

[Close]
BLAST of Lsi07G003190 vs. TrEMBL
Match: A0A0B2QPI4_GLYSO (Splicing regulatory glutamine/lysine-rich protein 1 OS=Glycine soja GN=glysoja_015612 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 4.7e-130
Identity = 266/411 (64.72%), Postives = 313/411 (76.16%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVG KIGS SQ+LEN++VSSDS +   VE  KP++ S   IN         +DQ 
Sbjct: 1   MAVAENVGAKIGSSSQNLENSVVSSDSGE---VEKSKPRSGS---IN---------DDQK 60

Query: 61  IQKKV-HLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +   V + QDR          + N+ AQMGQM      N          GYGMN    GV
Sbjct: 61  LNIGVFNHQDRVPGTMPVPNSNYNYNAQMGQMHANGVNN---------DGYGMN----GV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGG----AGLGYTNDFL 180
           ++G + G++FKRDMRDLEELLSKLNPMAEEFVPPSL+ N  GY  G    AG GY N+F+
Sbjct: 121 MSGENEGESFKRDMRDLEELLSKLNPMAEEFVPPSLS-NTHGYLAGPGAGAGFGYPNNFI 180

Query: 181 LQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLAT 240
           L  N  +  G  +RR+KNG++ G+RR+N+KM+  KR+EMTRRTVYVSDIDQ VTEE LA 
Sbjct: 181 LLNNFGDANGQTNRRRKNGYNHGKRRVNHKMDMEKREEMTRRTVYVSDIDQLVTEEQLAA 240

Query: 241 VFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIA 300
           +F +CG+VVDCR+CGDPNSIL FAFIEFTDEEGARA+LNLSGT+LG+YP+RVLPSKTAI 
Sbjct: 241 LFLNCGQVVDCRVCGDPNSILRFAFIEFTDEEGARAALNLSGTMLGYYPLRVLPSKTAIV 300

Query: 301 PVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYH 360
           PVNP FLPRS+DEREMCSRTIYCTNIDKK    +TQA+VK FFES+CGEVQRLRLLGDYH
Sbjct: 301 PVNPTFLPRSEDEREMCSRTIYCTNIDKK----LTQADVKHFFESICGEVQRLRLLGDYH 360

Query: 361 HSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           HSTRIAFVEFT+AESAIAAL+CSGV+LGSLPIRVSPSKTPVR R+PR  ++
Sbjct: 361 HSTRIAFVEFTVAESAIAALSCSGVILGSLPIRVSPSKTPVRSRAPRPTMH 378

[Close]
BLAST of Lsi07G003190 vs. TrEMBL
Match: I1JYJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G229500 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 6.2e-130
Identity = 267/413 (64.65%), Postives = 315/413 (76.27%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVG KIGS SQ+LEN +VSS+S +   VE  KP++ S   IN         +DQ 
Sbjct: 1   MAVAENVGAKIGSSSQNLENNVVSSNSGE---VEQSKPRSGS---IN---------DDQK 60

Query: 61  IQKKV-HLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +   V + QDR          + N++AQMGQM     TNG +       GYGMN    GV
Sbjct: 61  LNNGVFNHQDRVPGTMPVPNSNYNYEAQMGQMH----TNGVN-----NDGYGMN----GV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF------GGAGLGYTND 180
           I G +GG++FKRDMRDLEELLSKLNPMAEEFVPPSL  N  GY        GAG GY N+
Sbjct: 121 ICGENGGESFKRDMRDLEELLSKLNPMAEEFVPPSLT-NTHGYLPGPGAGAGAGFGYPNN 180

Query: 181 FLLQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELL 240
           F+L  N  +  G  +RR+KNG++ G+RR+N+KM+  KR+EM RRTVYVSDIDQ VTEE L
Sbjct: 181 FILLNNFGDANGQTNRRRKNGYNHGKRRVNHKMDMEKREEMIRRTVYVSDIDQLVTEEQL 240

Query: 241 ATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTA 300
           A +F +CG+VVDCR+CGDPNSIL FAF+EFTDE+GARA+LNLSGT+LG+YP+RVLPSKTA
Sbjct: 241 AGLFLNCGQVVDCRVCGDPNSILRFAFVEFTDEDGARAALNLSGTMLGYYPLRVLPSKTA 300

Query: 301 IAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGD 360
           IAPVNP FLPRS+DEREMCSRTIYCTNIDKK    +TQA+VK FFES+CGEVQRLRLLGD
Sbjct: 301 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKK----LTQADVKHFFESICGEVQRLRLLGD 360

Query: 361 YHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           YHHSTRIAFVEFT+AESAIAAL+CSGV+LGSLPIRVSPSKTPVR R+PR  ++
Sbjct: 361 YHHSTRIAFVEFTVAESAIAALSCSGVILGSLPIRVSPSKTPVRSRAPRPSMH 380

[Close]
BLAST of Lsi07G003190 vs. TAIR10
Match: AT4G10610.1 (AT4G10610.1 CTC-interacting domain 12)

HSP 1 Score: 387.9 bits (995), Expect = 7.8e-108
Identity = 206/329 (62.61%), Postives = 248/329 (75.38%), Query Frame = 1 

Query: 79  LPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVINGTDGGDTFKRDMRDLEE 138
           L SP+  + +   ++G  +N          G G++      +  +DGG++FKRDMR+L E
Sbjct: 18  LISPSPPSSVTSQESGASSNNDH------GGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 139 LLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNNSRRKKNGFSQG 198
           LLSKLNPMA+EF+PPSL K     F G      N F+   N   NE  + RRKK+   QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 199 RRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHF 258
           +RRMN + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 259 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYC 318
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 319 TNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCS 378
           TNIDKK    +TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCS
Sbjct: 258 TNIDKK----LTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCS 317

Query: 379 GVVLGSLPIRVSPSKTPVRPRS-PRAQLN 407
           GV+LGSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 318 GVLLGSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]
BLAST of Lsi07G003190 vs. TAIR10
Match: AT3G49390.1 (AT3G49390.1 CTC-interacting domain 10)

HSP 1 Score: 378.3 bits (970), Expect = 6.2e-105
Identity = 220/408 (53.92%), Postives = 277/408 (67.89%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSND----PKDVENQKPKNDSTLPINAESDFHPNA 60
           MAVAEN G K+ S  Q+L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 61  NDQNIQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRP 120
           +D+                       N  AQ  Q  NGF  NG+              R 
Sbjct: 61  DDRI----------------------NETAQKVQTLNGFSGNGE--------------RD 120

Query: 121 NGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLL 180
           N   NG         +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 N---NG---------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 181 QANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 240
                +   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 241 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 300
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 301 VNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHH 360
           VNP FLPRS+DEREMC RT+YCTNIDK++    TQ ++K FFE LCGEV RLRL GDYHH
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRI----TQIDLKGFFEMLCGEVHRLRL-GDYHH 351

Query: 361 STRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 405
            TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 QTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]
BLAST of Lsi07G003190 vs. TAIR10
Match: AT1G32790.2 (AT1G32790.2 CTC-interacting domain 11)

HSP 1 Score: 372.1 bits (954), Expect = 4.4e-103
Identity = 193/276 (69.93%), Postives = 222/276 (80.43%), Query Frame = 1 

Query: 121 NGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFS-----GYFGGAGLGYTND-F 180
           +G DGG++FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F  AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 181 LLQANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDY 360
           APVNP FLPR++DEREMC+RTIYCTNIDKK    VTQ++VK+FFES CGEV RLRLLGDY
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKK----VTQSDVKIFFESFCGEVYRLRLLGDY 310

Query: 361 HHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVS 391
            HSTRIAFVEF MAESAIAALNCSGVVLGSLPIR S
Sbjct: 311 QHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRSS 342

[Close]
BLAST of Lsi07G003190 vs. TAIR10
Match: AT3G14450.1 (AT3G14450.1 CTC-interacting domain 9)

HSP 1 Score: 313.5 bits (802), Expect = 1.9e-85
Identity = 164/278 (58.99%), Postives = 204/278 (73.38%), Query Frame = 1 

Query: 132 DMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEG------ 191
           DM  L  +  KLNP+A+EF P       +     A      D        + E       
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 192 -NNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVV 251
            +++ RK+  +SQGRRR+  +++  +R++  RRTVYVSDIDQ VTEE LA +F++CG+VV
Sbjct: 109 KDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVV 168

Query: 252 DCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPR 311
           DCRICGDP+S+L FAF+EF D++GA  +L+L GT+LGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 169 DCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPR 228

Query: 312 SDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 371
           S+DEREMC+RTIYCTNIDKK    V+QA+V+ FFES CGEV RLRLLGD  HSTRIAFVE
Sbjct: 229 SEDEREMCTRTIYCTNIDKK----VSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVE 288

Query: 372 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 403
           F +A+SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 FALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]
BLAST of Lsi07G003190 vs. TAIR10
Match: AT1G53650.1 (AT1G53650.1 CTC-interacting domain 8)

HSP 1 Score: 312.8 bits (800), Expect = 3.2e-85
Identity = 164/275 (59.64%), Postives = 207/275 (75.27%), Query Frame = 1 

Query: 133 MRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQANSLNNEGNN---SR 192
           M+ L  +  KLNP A+EF P S  +N +          ++DF++       +      +R
Sbjct: 50  MKKLVAMFKKLNPEAKEFFP-SYKRNTN---------QSDDFVIAIKPSGEDNKKVAINR 109

Query: 193 RKKNGFSQGRR-RMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRI 252
           R++N ++QGRR R+  + +  +R++  RRTVYVSDIDQ VTEE LA +F+SCG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 253 CGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDE 312
           CGDPNS+L FAF+EF+D++GAR++L+L GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 313 REMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMA 372
           REMCSRTIYCTN+DK      T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MA
Sbjct: 230 REMCSRTIYCTNVDK----NATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 289

Query: 373 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 404
           ESA+AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 ESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]
BLAST of Lsi07G003190 vs. NCBI nr
Match: gi|449438861|ref|XP_004137206.1| (PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis sativus])

HSP 1 Score: 747.7 bits (1929), Expect = 1.1e-212
Identity = 385/407 (94.59%), Postives = 391/407 (96.07%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQDRAAAATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]
BLAST of Lsi07G003190 vs. NCBI nr
Match: gi|659125887|ref|XP_008462907.1| (PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo])

HSP 1 Score: 746.1 bits (1925), Expect = 3.2e-212
Identity = 384/407 (94.35%), Postives = 390/407 (95.82%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAENVGPKIGSPSQ+L+NT+VSSDSNDP  VENQKP NDSTLPINA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQM-GQMQNGFETNGQSLMVKSASGYGMNQRPNGV 120
           +QKKVHLQDRA AATSFSLPSPNFK QM GQMQNGFETN QSLMV SAS YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQAN 180
           ING DGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240
           S+NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 DFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           DFLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]
BLAST of Lsi07G003190 vs. NCBI nr
Match: gi|1009123722|ref|XP_015878690.1| (PREDICTED: polyadenylate-binding protein-interacting protein 12 [Ziziphus jujuba])

HSP 1 Score: 535.8 bits (1379), Expect = 6.5e-149
Identity = 286/413 (69.25%), Postives = 332/413 (80.39%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAEN        + + +NT+VSS SN   D+EN KP++DS+  +  E +F  N +DQN
Sbjct: 1   MAVAEN--------APNFDNTVVSSGSNAQNDLENPKPRSDSSGVLGGEPNFQSNGSDQN 60

Query: 61  IQKKVHLQDRAAAATS---FSLPSPNFKAQMGQMQNGFETNG---QSLMVKSASGYGMNQ 120
            Q K H Q++AA A +   FS+P+ N K Q+GQMQNGF+TNG   Q ++V  + G+G++ 
Sbjct: 61  SQGKFHNQEKAAPAAATPNFSVPTNNHKTQIGQMQNGFDTNGVNNQQMVVVKSGGFGIDH 120

Query: 121 RPNGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDF 180
             NG+ NG DG ++FKRDMRDLEELLSKLNPMAEEFVPPSLAKN    FG AG G+ N+F
Sbjct: 121 MSNGMRNGGDGDESFKRDMRDLEELLSKLNPMAEEFVPPSLAKNHGYPFGAAGFGFANNF 180

Query: 181 LLQA-NSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELL 240
           L+   NS N  G+ +RRKKNGFSQGRRR  +K++  +R+ M RRTVYVSDIDQQVTEE L
Sbjct: 181 LIHTDNSGNANGHTARRKKNGFSQGRRRNYHKLSPAQREAMIRRTVYVSDIDQQVTEENL 240

Query: 241 ATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTA 300
           A +F SCG+VVDCR+CGDPNSIL FAFIEFTDEEGARA+LNLSGT+LG+YPVRVLPSKTA
Sbjct: 241 AALFLSCGQVVDCRVCGDPNSILRFAFIEFTDEEGARAALNLSGTMLGYYPVRVLPSKTA 300

Query: 301 IAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGD 360
           IAPVNP FLPRSDDEREMCSRTIYCTNIDKK    VTQAEVKLFFESLCGEV RLRLLGD
Sbjct: 301 IAPVNPTFLPRSDDEREMCSRTIYCTNIDKK----VTQAEVKLFFESLCGEVHRLRLLGD 360

Query: 361 YHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           YHHSTRIAFVEF +AESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR  L+
Sbjct: 361 YHHSTRIAFVEFAIAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRPVLH 401

[Close]
BLAST of Lsi07G003190 vs. NCBI nr
Match: gi|645257950|ref|XP_008234654.1| (PREDICTED: polyadenylate-binding protein-interacting protein 12-like [Prunus mume])

HSP 1 Score: 523.1 bits (1346), Expect = 4.4e-145
Identity = 280/409 (68.46%), Postives = 324/409 (79.22%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAEN        + + +NT VSSDSN   D+ N KP+ DS++ ++AE +   N +DQN
Sbjct: 1   MAVAEN--------APNFDNTAVSSDSNAQNDLANPKPRVDSSVVLSAEPNLQSNGDDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNG---QSLMVKSASGYGMNQRPN 120
            Q K   Q++    T+ S+P+ N K  MGQMQNGF+TNG     ++     GYG++QR N
Sbjct: 61  PQDKFQNQEKV---TTLSVPTSNHKPHMGQMQNGFDTNGVDNHQMVAVKTGGYGIDQRSN 120

Query: 121 GVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLLQ 180
           GV NG DG ++FKRDMRDLEELLSKLNPMA+EFVPPSL  N  G+    G GY N+FL+Q
Sbjct: 121 GVRNGGDGDESFKRDMRDLEELLSKLNPMAKEFVPPSLVNNH-GFSLAGGFGYANNFLVQ 180

Query: 181 ANSLNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVF 240
            NS N  G   RRKKNG+SQGRRR   KM+  +R+EM RRTVYVSDIDQQVTEE LA +F
Sbjct: 181 TNSDNANGLIGRRKKNGYSQGRRRNYYKMSLAQREEMIRRTVYVSDIDQQVTEENLAALF 240

Query: 241 ASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPV 300
            SCG+VVDCR+CGDPNSIL FAF+EFTDEEGAR +L+LSGT+LG+YPVRVLPSKTAIAPV
Sbjct: 241 LSCGQVVDCRVCGDPNSILRFAFVEFTDEEGARVALSLSGTMLGYYPVRVLPSKTAIAPV 300

Query: 301 NPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYHHS 360
           NP FLPRSDDEREMCSRTIYCTNIDKK    VTQA+VKLFFESLCGEVQRLRLLGDYHHS
Sbjct: 301 NPTFLPRSDDEREMCSRTIYCTNIDKK----VTQADVKLFFESLCGEVQRLRLLGDYHHS 360

Query: 361 TRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 407
           TRIAFVEFT+AESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR+ L+
Sbjct: 361 TRIAFVEFTVAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRSPLH 393

[Close]
BLAST of Lsi07G003190 vs. NCBI nr
Match: gi|596000354|ref|XP_007218059.1| (hypothetical protein PRUPE_ppa006808mg [Prunus persica])

HSP 1 Score: 519.6 bits (1337), Expect = 4.8e-144
Identity = 284/410 (69.27%), Postives = 327/410 (79.76%), Query Frame = 1 

Query: 1   MAVAENVGPKIGSPSQSLENTIVSSDSNDPKDVENQKPKNDSTLPINAESDFHPNANDQN 60
           MAVAEN        + + +NT VSSDSN   D+ N KP+ DS++ ++AE +   N +DQN
Sbjct: 1   MAVAEN--------APNFDNTAVSSDSNAQNDLANPKPRVDSSVVLSAEPNLQSNGDDQN 60

Query: 61  IQKKVHLQDRAAAATSFSLPSPNFKAQMGQMQNGFETNG----QSLMVKSASGYGMNQRP 120
            Q K   Q++    T+ S+P+ N K QMGQMQNGF+TNG    Q + VKS  GYG++QR 
Sbjct: 61  PQDKFQNQEKV---TTLSVPTSNHKPQMGQMQNGFDTNGVDNHQMVAVKSG-GYGIDQRS 120

Query: 121 NGVINGTDGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTNDFLL 180
           NGV NG DG ++FKRDMRDLEELLSKLNPMA+EFVPPSL  N  G+    G GY N+FL+
Sbjct: 121 NGVRNGGDGDESFKRDMRDLEELLSKLNPMAKEFVPPSLVNNH-GFSLAGGFGYANNFLV 180

Query: 181 QANSLNNEGNNSRRKKNGFS-QGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLAT 240
           Q NS N  G   RRKKNG+S QGRR+   KM+  +R+EM RRTVYVSDIDQQVTEE LA 
Sbjct: 181 QINSDNANGLIGRRKKNGYSSQGRRKNYYKMSLAQREEMIRRTVYVSDIDQQVTEENLAA 240

Query: 241 VFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIA 300
           +F SCG+VVDCR+CGDPNSIL FAF+EFTDEEGAR +L+LSGT+LG+YPVRVLPSKTAIA
Sbjct: 241 LFLSCGQVVDCRVCGDPNSILRFAFVEFTDEEGARVALSLSGTMLGYYPVRVLPSKTAIA 300

Query: 301 PVNPDFLPRSDDEREMCSRTIYCTNIDKKVGLEVTQAEVKLFFESLCGEVQRLRLLGDYH 360
           PVNP FLPRSDDEREMCSRTIYCTNIDKK    VTQA+VKLFFESLCGEVQRLRLLGDYH
Sbjct: 301 PVNPTFLPRSDDEREMCSRTIYCTNIDKK----VTQADVKLFFESLCGEVQRLRLLGDYH 360

Query: 361 HSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQL 406
           HSTRIAFVEFT+AESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR+ L
Sbjct: 361 HSTRIAFVEFTVAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRSPL 393

The following BLAST results are available for this feature:
BLAST of Lsi07G003190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CID11_ARATH1.0e-10971.53Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana GN=... [more]
CID12_ARATH1.4e-10662.61Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana GN=... [more]
CID10_ARATH1.1e-10353.92Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana GN=... [more]
CID9_ARATH3.3e-8458.99Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana GN=C... [more]
CID8_ARATH5.6e-8459.64Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana GN=C... [more]
BLAST of Lsi07G003190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ10_CUCSA7.6e-21394.59Uncharacterized protein OS=Cucumis sativus GN=Csa_4G090360 PE=4 SV=1[more]
M5XCM1_PRUPE3.4e-14469.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006808mg PE=4 SV=1[more]
I1KB01_SOYBN5.1e-13265.45Uncharacterized protein OS=Glycine max GN=GLYMA_06G135200 PE=4 SV=1[more]
A0A0B2QPI4_GLYSO4.7e-13064.72Splicing regulatory glutamine/lysine-rich protein 1 OS=Glycine soja GN=glysoja_0... [more]
I1JYJ5_SOYBN6.2e-13064.65Uncharacterized protein OS=Glycine max GN=GLYMA_04G229500 PE=4 SV=1[more]
BLAST of Lsi07G003190 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10610.17.8e-10862.61 CTC-interacting domain 12[more]
AT3G49390.16.2e-10553.92 CTC-interacting domain 10[more]
AT1G32790.24.4e-10369.93 CTC-interacting domain 11[more]
AT3G14450.11.9e-8558.99 CTC-interacting domain 9[more]
AT1G53650.13.2e-8559.64 CTC-interacting domain 8[more]
BLAST of Lsi07G003190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438861|ref|XP_004137206.1|1.1e-21294.59PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis sativus... [more]
gi|659125887|ref|XP_008462907.1|3.2e-21294.35PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo][more]
gi|1009123722|ref|XP_015878690.1|6.5e-14969.25PREDICTED: polyadenylate-binding protein-interacting protein 12 [Ziziphus jujuba... [more]
gi|645257950|ref|XP_008234654.1|4.4e-14568.46PREDICTED: polyadenylate-binding protein-interacting protein 12-like [Prunus mum... [more]
gi|596000354|ref|XP_007218059.1|4.8e-14469.27hypothetical protein PRUPE_ppa006808mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR009818Ataxin-2_C
IPR000504RRM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G003190.1Lsi07G003190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 327..387
score: 1.4E-6coord: 219..281
score: 1.8
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 315..390
score: 2.2E-8coord: 218..288
score: 5.3
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 217..292
score: 13.208coord: 314..394
score: 11
IPR009818Ataxin-2, C-terminalPFAMPF07145PAM2coord: 141..154
score: 2.
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 185..290
score: 4.7E-16coord: 306..396
score: 5.4
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 303..400
score: 1.36E-13coord: 181..293
score: 8.96
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 211..395
score: 3.7E-22coord: 26..45
score: 3.7