Carg15040 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15040
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	polyadenylate-binding protein-interacting protein 12
Location	Cucurbita_argyrosperma_scaffold_078 : 249510 .. 254034 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAATATGTTGAGGGGAAGGGGAAGGGGGCGTACCAAAAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGAAAGGAGGCCCCAAGAGATAGTCCACCGCAATCCGACGATCTGAGCAATCAACGTACACACTCCTCCTTCCCTCTTTCTTTCTTTCTCTATTTCTACACTAATTACCAAACAGGAAAACTCACACTTCGCTTCTCTCTCTTTCTCTCGCTCTCCACCTTTTTGTTAATTCGCACACAGGGTTTTTCGTTTTCGTTTCGATCCTCTTCAATTTCGTCTCTCTTCTCTTACTTCTTCTACTCCACGATCTCCTCCTGGGTTTCGCCGTTTTCCAATGGAAATGTATTAGATAAGCCCTCTCCCCCCATCAGGTAACACCCTACCTCTTCTTTGACCGCTCTTTTTATTCCTATTCTTATTATTAATATTCTTTTCCCGATTTCTCTTGCTTTTTTCCACCCCGACGGATATCTCGATCATACCCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTGTTTTGTTTTTGTTTTTCTTTTTGTTTTTGTTTTTCCAGAATAAGATTGTGAAAGAACGATCTTGTTGCACAAACCTCTTTCCCATCATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTTGAAAACACCATGGTTTCCTCCGATTCTAATGATCTCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTGCGGTTTCGATTAATGCAGAACCCGACTTTCATCCCAACGCAATCGATCAGAATACACAGAAGAAGGCACACCTCCAGGAGAGAGCGGCTGCCGCAACTTCTTTTGCACTTCCTTCACCCAATTTCAAGCCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGCCCAGTCGCTAATGGTGAAGTCTGCTGCTGGTTATGGGATGAATCAGAGGCCTAATGGAGTGATAAACGGAGCCGATGGAGGGGAAAACTTTAAGAGGGATATGAGGGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTTCCTCCTTCGCTAGCCAAAAATTTTTCGGGTTACTTCGGCGGTGCTGCCCTTGGGTATACGAACGACTTTCTATTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAATCGAAGGGTATGTGGGTTTTTTTTGTTCTGTTTAATGATCTGGGAAGCTTATTTAGACTATTGTTAAGCCTTAAATAATCCGCACTTTGATTTCTGGAGAACAAAACCACTCAGACTAAACATGCCTGCTACGAGATGTTCATTTCTAAGTGCTATGATATTGCTACGAGAGTTGTATTATTTGATTGCACGTTTTAGTACTAGGGATTGTACAGAATTCTATTCTATTTCCTTTGTTTATGTTGAATGAATCTCATATTGATTTTGTATTTTCTTTTGTTTCTCTGTTCTTTTTGGTAGAAGAAGAATGGTTTTAGTCAAGGTAGACGGAAGACGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGAAGGACAGTGTATGTATCAGACATTGATCAGCAGGTAAGAGCCTTCCATCCCCCAAACTCTACTGCTTATGTGCCTTGCTATGTCCTTTTTACCTATTCAATTATGGATGGTGGAAATACATTGTAGGTGACTGAAGAGCTACTTGCTACCGTCTTTGCTAACTGTGGAGAGGTGACTCGTTATTCTCTTTTTTCCATTTGATATGATTTTTGGCATTTTACTGCTAGCTTAATGTTTGTCTTCTTCATTAGGTTGTTGACTGTCGTATCTGTGGCGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGGTATAATCCCAAGTTCAGTTTATTCATAGATACATTTTCTACTTGTGCTATCATATCTGATTTGCTTCATGTTACCAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTTTATCCAGTCAGAGTGCTGCCCTCAAAAACTGCAATAGCACCTGTCAATCCTGAATTTTTACCCAGGGTAATTATCAGCCATCAATGTCATTCATCTAAATTTTACTACATTTTAACTTGTTAGCTATGCTATCAACTCTTTACAATTTATTCCACTTATTTTCTTGAAATTGGCTTTCTTGTGTTCTATTGTTTCTAGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTATGTTTGGAAGTGAAAAATCTCTGAATGTAATTGAGAACTGTGTTTTTGGAAGAGTAGAAGTTGAAAGAACTTAAATATTTTTTATTTTTATATTTGTTGTTTTCATGTTATGTAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTCTGCACTTTCTCGTATAACAGATTTTGTATATTTTAAGACTTTGATGTGATTCTGCTTACAGTGCTTTATGTTCTCTGGTTGTGAATTAATCTATGTCATCTGTTAACCCTATGTAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCATTTGTTGAGTTTACAATGGTAATCTTGTTCTCTTCTGTTGATATTTTTGCTTTTTGTTTTTTTATAACCTTTCATCCTACCATGTTTATAACTTTCCTCTTTTATTTTATTTTATTTTTTGGGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTTGGTCAAATATTTCTGTTGTGTTTCTTGTTCTTACCATTCACCAATTCATCTTCGGTTTTGTGGCAATACAGTGGTATATAATGCATGTAGACTTAATAATGGATGTGGTTTGCCTTACCAACCACTCTATTGTGGTTCTTGTGTATACCATTCGCCAATACATCTTTGGTCTGGTGGTGTACAGAATGCATTTAGGGTTCCTGCTTCACTTATTTTATATCACTGCTGTCTAGCACTGTCAAATATTGTTGCAATGCATGTTTGGTCTTTTGAAATCATTTGATATGTGATCCTTTTCATTTGAATGATTTTAGTGTTTCACGTTTGTGATTAACACCGGATTTGCTATGCCCTAAAAGTATTTCTAGAAAACAGTGGTGTTTATGCAGTCACATGAATGTTATGTTGGCTGTAACCAACCTACCCATAGCTTTGCATGAAAGTGTGGATTTGATACTAATTTGCAGGCTGAGAGTGCAATTGCTGCTCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGTTATATTAGCTCATTCTTGTTGGGTATTTTGAAAAATGCATGTGTTTTTGTTCTGAAGAATATAACCATGATTCTCATGGGTTTGTTTTCAGGGTGAGCCCATCAAAGACCCCAGTTCGTCCTCGTTCTCCTCGTGCCCAGCTGAACTGAATGCTCCCTGCATCTGTTCCATGTCGGTCTGGTGCTCAATAGATATATTTATATATATTGCATATATATATATATATATTATGGTTATAGAGATATGTTCAGAAGGGGTTGTTGCCTTTAGTGATGCATGGATCCTCTGCAGTGGAGTTGGTACCTTTTGGTACCTTGAACTAGAAGGTGCTATTGGTGAATGAGATATTTGTTTAGGTTTTTTATAGAGTGGATGGCATTTTGAGGCTCTTAATCGATTATCTCTGATGATGTTATGATGGATGGATGGATGGATTCTGTAGGGTTGATCCCTGGGAACACTTAGCACTTGCTTTCAATGTTTCTAACTGGAAACTCTTAATCAACTCTCCGCTCTTTAGTCTCTTCTGTTGCGTGAGTCTTTCATCATCTGCACTCTGGATGTTCCGTTCTCTGTTTGTTTTGTTCATTATTATGCTGCTGCCTGCTGCCGCATGGATAATATGTAGAACGACTTTGATAAGGTGTTTTGTACAACCATGTCTCCACGTTCCAAATAGATATAGGTAAATAACCCACGCAAATGAACTTGATAGCCAGTCTACCGTGTTGAAAGTTTCCATCAGTGTTTTCCCTTGCAACAGCTGCTGAATCGTTTGGAATGTTTGAAGCGAAAGTGTTGTAAAATCTTGAGATTTGTTTTTTTTTTTTGTTCTTTGTTTTTTGATGAATGCTTGGTCAAAGGATTGTACACAGTTGGTATTTGCGTCAAAGTTAAGACAATGAAGAGTTTGGTCAGGGTGGGCCGGCGAGACATTATTTGTAGCAGCTCTCAAAGGCTCTACGGAACCCTTCATTCACACCCTTTCTTAATTTGCAGAGGCCATTTGGTTGCTTTCTTCTTCAGCCATTACCAGTTAAGCCTAAAGTTCACCCTTTGTTTCTTAGTTTATGGTTCTGTTTTATTCTCAACCAAAACAATTGATTTAGTTAAGGTTGGGAGAAACTGTCTGTTTGGACAATGAGTCGGAATTTGAGTTGGACGGAAGTATTTTGAGGGAGACACGAGAACGAAGAGTAGGTAGGAATAAAGGATAAAGAAGA

mRNA sequence

TGAAATATGTTGAGGGGAAGGGGAAGGGGGCGTACCAAAAATTTCATCTCATCGGTCATTTCTGGGATGCTGTGAAAGGAGGCCCCAAGAGATAGTCCACCGCAATCCGACGATCTGAGCAATCAACGTACACACTCCTCCTTCCCTCTTTCTTTCTTTCTCTATTTCTACACTAATTACCAAACAGGAAAACTCACACTTCGCTTCTCTCTCTTTCTCTCGCTCTCCACCTTTTTGTTAATTCGCACACAGGGTTTTTCGTTTTCGTTTCGATCCTCTTCAATTTCGTCTCTCTTCTCTTACTTCTTCTACTCCACGATCTCCTCCTGGGTTTCGCCGTTTTCCAATGGAAATGTATTAGATAAGCCCTCTCCCCCCATCAGGTAACACCCTACCTCTTCTTTGACCGCTCTTTTTATTCCTATTCTTATTATTAATATTCTTTTCCCGAATAAGATTGTGAAAGAACGATCTTGTTGCACAAACCTCTTTCCCATCATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTTGAAAACACCATGGTTTCCTCCGATTCTAATGATCTCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTGCGGTTTCGATTAATGCAGAACCCGACTTTCATCCCAACGCAATCGATCAGAATACACAGAAGAAGGCACACCTCCAGGAGAGAGCGGCTGCCGCAACTTCTTTTGCACTTCCTTCACCCAATTTCAAGCCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGCCCAGTCGCTAATGGTGAAGTCTGCTGCTGGTTATGGGATGAATCAGAGGCCTAATGGAGTGATAAACGGAGCCGATGGAGGGGAAAACTTTAAGAGGGATATGAGGGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTTCCTCCTTCGCTAGCCAAAAATTTTTCGGGTTACTTCGGCGGTGCTGCCCTTGGGTATACGAACGACTTTCTATTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAATCGAAGGAAGAAGAATGGTTTTAGTCAAGGTAGACGGAAGACGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGAAGGACAGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACCGTCTTTGCTAACTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGCGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTTTATCCAGTCAGAGTGCTGCCCTCAAAAACTGCAATAGCACCTGTCAATCCTGAATTTTTACCCAGGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCATTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCTCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCATCAAAGACCCCAGTTCGTCCTCGTTCTCCTCGTGCCCAGCTGAACTGAATGCTCCCTGCATCTGTTCCATGTCGGTCTGGTGCTCAATAGATATATTTATATATATTGCATATATATATATATATATTATGGTTATAGAGATATGTTCAGAAGGGGTTGTTGCCTTTAGTGATGCATGGATCCTCTGCAGTGGAGTTGGTACCTTTTGGTACCTTGAACTAGAAGGTGCTATTGGTGAATGAGATATTTGTTTAGGTTTTTTATAGAGTGGATGGCATTTTGAGGCTCTTAATCGATTATCTCTGATGATGTTATGATGGATGGATGGATGGATTCTGTAGGGTTGATCCCTGGGAACACTTAGCACTTGCTTTCAATGTTTCTAACTGGAAACTCTTAATCAACTCTCCGCTCTTTAGTCTCTTCTGTTGCGTGAGTCTTTCATCATCTGCACTCTGGATGTTCCGTTCTCTGTTTGTTTTGTTCATTATTATGCTGCTGCCTGCTGCCGCATGGATAATATGTAGAACGACTTTGATAAGGTGTTTTGTACAACCATGTCTCCACGTTCCAAATAGATATAGGTAAATAACCCACGCAAATGAACTTGATAGCCAGTCTACCGTGTTGAAAGTTTCCATCAGTGTTTTCCCTTGCAACAGCTGCTGAATCGTTTGGAATGTTTGAAGCGAAAGTGTTGTAAAATCTTGAGATTTGTTTTTTTTTTTTGTTCTTTGTTTTTTGATGAATGCTTGGTCAAAGGATTGTACACAGTTGGTATTTGCGTCAAAGTTAAGACAATGAAGAGTTTGGTCAGGGTGGGCCGGCGAGACATTATTTGTAGCAGCTCTCAAAGGCTCTACGGAACCCTTCATTCACACCCTTTCTTAATTTGCAGAGGCCATTTGGTTGCTTTCTTCTTCAGCCATTACCAGTTAAGCCTAAAGTTCACCCTTTGTTTCTTAGTTTATGGTTCTGTTTTATTCTCAACCAAAACAATTGATTTAGTTAAGGTTGGGAGAAACTGTCTGTTTGGACAATGAGTCGGAATTTGAGTTGGACGGAAGTATTTTGAGGGAGACACGAGAACGAAGAGTAGGTAGGAATAAAGGATAAAGAAGA

Coding sequence (CDS)

ATGGCGGTTGCTGAGAATGTTGGACCCAAAATCGGCTCTCCAAGTCAAAGTTTTGAAAACACCATGGTTTCCTCCGATTCTAATGATCTCAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTGCGGTTTCGATTAATGCAGAACCCGACTTTCATCCCAACGCAATCGATCAGAATACACAGAAGAAGGCACACCTCCAGGAGAGAGCGGCTGCCGCAACTTCTTTTGCACTTCCTTCACCCAATTTCAAGCCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGCCCAGTCGCTAATGGTGAAGTCTGCTGCTGGTTATGGGATGAATCAGAGGCCTAATGGAGTGATAAACGGAGCCGATGGAGGGGAAAACTTTAAGAGGGATATGAGGGATCTGGAGGACTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTTCCTCCTTCGCTAGCCAAAAATTTTTCGGGTTACTTCGGCGGTGCTGCCCTTGGGTATACGAACGACTTTCTATTGCAAGCTAATTCTCTCAACAACGAAGGGAATAATAATCGAAGGAAGAAGAATGGTTTTAGTCAAGGTAGACGGAAGACGAATAATAAGATGAATGCAGTGAAGCGAGATGAGATGACCCGAAGGACAGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACCGTCTTTGCTAACTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGCGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCAAGGGCTTCCTTGAATCTTTCAGGGACAGTGCTTGGTTTTTATCCAGTCAGAGTGCTGCCCTCAAAAACTGCAATAGCACCTGTCAATCCTGAATTTTTACCCAGGTCGGACGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTGTTCTTTGAATCACTATGTGGAGAGGTTCAGCGCCTTAGGCTACTTGGAGATTATCATCATTCCACTCGTATAGCATTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCTCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCATCAAAGACCCCAGTTCGTCCTCGTTCTCCTCGTGCCCAGCTGAACTGA

Protein sequence

MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQNTQKKAHLQERAAAATSFALPSPNFKPQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANSLNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPEFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN

Homology

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BLAST of Carg15040 vs. NCBI nr
Match: XP_022922600.1 (polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata] >XP_022922601.1 polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata])

HSP 1 Score: 765.8 bits (1976), Expect = 7.5e-218
Identity = 398/402 (99.00%), Postives = 398/402 (99.00%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAENVGPKIGSPSQSFENTMVSSDSND KDVENQKPKNDSAVSINAEPDFHPN IDQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGVI 120
           TQKKAHLQERAAAATSFALPSPNFK QMGQMQNGFETNAQSLMVKSAA YGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAATSFALPSPNFKAQMGQMQNGFETNAQSLMVKSAAAYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180
           NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 LNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240
           LNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC
Sbjct: 181 LNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Carg15040 vs. NCBI nr
Match: XP_022984928.1 (polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima] >XP_022984929.1 polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima])

HSP 1 Score: 763.5 bits (1970), Expect = 3.7e-217
Identity = 396/402 (98.51%), Postives = 397/402 (98.76%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAENVGPKIGSPSQSFENTM+SSDSND KDVENQKPKNDSAVSINAEPDFHPN IDQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGVI 120
           TQKKAHLQERAAAA SFALPSPNFK QMGQMQNGFETNAQSLMVKSA GYGMNQRPNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180
           NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 181 LNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240
           LNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC
Sbjct: 181 LNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of Carg15040 vs. NCBI nr
Match: XP_023552522.1 (polyadenylate-binding protein-interacting protein 12 [Cucurbita pepo subsp. pepo] >XP_023552523.1 polyadenylate-binding protein-interacting protein 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 760.8 bits (1963), Expect = 2.4e-216
Identity = 397/403 (98.51%), Postives = 398/403 (98.76%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAENVGPKIGSPSQSFENTMVSSDSND KDV+NQKPKNDS VSINAEPDFHPN IDQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDPKDVQNQKPKNDSTVSINAEPDFHPNGIDQN 60

Query: 61  TQKK-AHLQERAAAATSFALPSPNFKPQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGV 120
           TQKK AHLQERAAAATSFALPSPNFK QMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGV
Sbjct: 61  TQKKAAHLQERAAAATSFALPSPNFKAQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQAN 180
           INGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQAN
Sbjct: 121 INGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQAN 180

Query: 181 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 240
           SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN
Sbjct: 181 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Carg15040 vs. NCBI nr
Match: XP_004137206.1 (PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >XP_011653324.1 PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >KGN53617.1 hypothetical protein Csa_4G090360 [Cucumis sativus])

HSP 1 Score: 709.1 bits (1829), Expect = 8.3e-201
Identity = 360/403 (89.33%), Postives = 374/403 (92.80%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAENVGPKIGSPSQ+ +NT+VSSDSND   VENQKP NDS + INA+ DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQM-GQMQNGFETNAQSLMVKSAAGYGMNQRPNGV 120
            QKK HLQ+RAAAATSF+LPSPNFKPQM GQMQNGFETN QSLMV SA+ YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 240
           S+NNEG        GFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           +FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Carg15040 vs. NCBI nr
Match: XP_008462907.1 (PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo])

HSP 1 Score: 707.6 bits (1825), Expect = 2.4e-200
Identity = 359/403 (89.08%), Postives = 373/403 (92.56%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAENVGPKIGSPSQ+ +NT+VSSDSND   VENQKP NDS + INA+ DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQM-GQMQNGFETNAQSLMVKSAAGYGMNQRPNGV 120
            QKK HLQ+RA AATSF+LPSPNFKPQM GQMQNGFETN QSLMV SA+ YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 240
           S+NNEG        GFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           +FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Carg15040 vs. TAIR10
Match: AT4G10610.1 (CTC-interacting domain 12)

HSP 1 Score: 384.8 bits (987), Expect = 6.5e-107
Identity = 200/325 (61.54%), Postives = 240/325 (73.85%), Query Frame = 0


Query: 79  LPSPNFKPQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGVINGADGGENFKRDMRDLED 138
           L SP+    +   ++G  +N          G G++      +  +DGGE+FKRDMR+L +
Sbjct: 18  LISPSPPSSVTSQESGASSN------NDHGGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 139 LLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANSLNNEGXXXXXXXXGFSQG 198
           LLSKLNPMA+EF+PPSL K     F G      N F+   N   NE            QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 199 RRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANCGEVVDCRICGDPNSILHF 258
           +R+ N + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 259 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPEFLPRSDDEREMCSRTIYC 318
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 319 TNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVL 378
           TNIDKK+TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCSGV+L
Sbjct: 258 TNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLL 317

Query: 379 GSLPIRVSPSKTPVRPRS-PRAQLN 403
           GSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 318 GSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of Carg15040 vs. TAIR10
Match: AT3G49390.1 (CTC-interacting domain 10)

HSP 1 Score: 367.9 bits (943), Expect = 8.2e-102
Identity = 189/285 (66.32%), Postives = 226/285 (79.30%), Query Frame = 0


Query: 120 INGADGGENFKRD----MRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFL 179
           +NG  G  N +RD    ++DL D  SKLNPMA+EFVPPSLA++ SG      LG+TN+F 
Sbjct: 72  LNGFSG--NGERDNNGEIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFA 131

Query: 180 LQANSLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLAT 239
                L +           F QG+R+ N + +  ++D++ RRTVYVSDIDQQVTEE LA 
Sbjct: 132 APP-KLADGNDHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAG 191

Query: 240 VFANCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIA 299
           VF NCG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIA
Sbjct: 192 VFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIA 251

Query: 300 PVNPEFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 359
           PVNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TR
Sbjct: 252 PVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTR 311

Query: 360 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 401
           IAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 312 IAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Carg15040 vs. TAIR10
Match: AT1G32790.2 (CTC-interacting domain 11)

HSP 1 Score: 359.4 bits (921), Expect = 2.9e-99
Identity = 191/272 (70.22%), Postives = 219/272 (80.51%), Query Frame = 0


Query: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKN-----FSGYFGGA-ALGYTNDF 180
           +G DGGE+FKRDMR+L++L SKLNPMAEEFVPPSL K        G+F  A         
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAXXXXXXXXX 130

Query: 181 LLQANSLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
                      XXXXXXXX F QG+R+ N + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 XXXXXXXXXXXXXXXXXXXSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFANCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F +CG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPEFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 360
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 361 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVS 387
           RIAFVEF MAESAIAALNCSGVVLGSLPIR S
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRSS 342

[Close]

BLAST of Carg15040 vs. TAIR10
Match: AT3G14450.1 (CTC-interacting domain 9)

HSP 1 Score: 316.6 bits (810), Expect = 2.2e-86
Identity = 166/279 (59.50%), Postives = 203/279 (72.76%), Query Frame = 0


Query: 132 DMRDLEDLLSKLNPMAEEFVPP----------SLAKNF--SGYFGGAALGYTNDFLLQAN 191
           DM  L  +  KLNP+A+EF P           + A  F  +  F         +F L A 
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 192 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 251
             +N           +SQGRR+   +++  +R++  RRTVYVSDIDQ VTEE LA +F+N
Sbjct: 109 KDDN-----TRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSN 168

Query: 252 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 311
           CG+VVDCRICGDP+S+L FAF+EF D++GA  +L+L GT+LGFYPVRVLPSKTAI PVNP
Sbjct: 169 CGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNP 228

Query: 312 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 371
            FLPRS+DEREMC+RTIYCTNIDKKV+QA+V+ FFES CGEV RLRLLGD  HSTRIAFV
Sbjct: 229 TFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFV 288

Query: 372 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 399
           EF +A+SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 EFALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]

BLAST of Carg15040 vs. TAIR10
Match: AT1G53650.1 (CTC-interacting domain 8)

HSP 1 Score: 310.1 bits (793), Expect = 2.0e-84
Identity = 160/271 (59.04%), Postives = 201/271 (74.17%), Query Frame = 0


Query: 133 MRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLL---QANSLNNEGXXXX 192
           M+ L  +  KLNP A+EF  PS  +N            ++DF++    +   N +     
Sbjct: 50  MKKLVAMFKKLNPEAKEFF-PSYKRN---------TNQSDDFVIAIKPSGEDNKKVAINR 109

Query: 193 XXXXGFSQGRR-KTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANCGEVVDCRI 252
                ++QGRR +   + +  +R++  RRTVYVSDIDQ VTEE LA +F++CG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 253 CGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPEFLPRSDDE 312
           CGDPNS+L FAF+EF+D++GAR++L+L GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 313 REMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAI 372
           REMCSRTIYCTN+DK  T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MAESA+
Sbjct: 230 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 289

Query: 373 AALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 400
           AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 AALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]

BLAST of Carg15040 vs. Swiss-Prot
Match: sp|Q9LPI5|CID11_ARATH (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=3702 GN=CID11 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 6.9e-106
Identity = 204/284 (71.83%), Postives = 232/284 (81.69%), Query Frame = 0


Query: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKN-----FSGYFGGA-ALGYTNDF 180
           +G DGGE+FKRDMR+L++L SKLNPMAEEFVPPSL K        G+F  A         
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAXXXXXXXXX 130

Query: 181 LLQANSLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 240
                      XXXXXXXX F QG+R+ N + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 XXXXXXXXXXXXXXXXXXXSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 241 TVFANCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 300
            +F +CG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 301 APVNPEFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 360
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 361 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 399
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of Carg15040 vs. Swiss-Prot
Match: sp|Q9S7N9|CID12_ARATH (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=3702 GN=CID12 PE=1 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.2e-105
Identity = 200/325 (61.54%), Postives = 240/325 (73.85%), Query Frame = 0


Query: 79  LPSPNFKPQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGVINGADGGENFKRDMRDLED 138
           L SP+    +   ++G  +N          G G++      +  +DGGE+FKRDMR+L +
Sbjct: 18  LISPSPPSSVTSQESGASSN------NDHGGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 139 LLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANSLNNEGXXXXXXXXGFSQG 198
           LLSKLNPMA+EF+PPSL K     F G      N F+   N   NE            QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 199 RRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANCGEVVDCRICGDPNSILHF 258
           +R+ N + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 259 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPEFLPRSDDEREMCSRTIYC 318
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 319 TNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVL 378
           TNIDKK+TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCSGV+L
Sbjct: 258 TNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLL 317

Query: 379 GSLPIRVSPSKTPVRPRS-PRAQLN 403
           GSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 318 GSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of Carg15040 vs. Swiss-Prot
Match: sp|Q9SG10|CID10_ARATH (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=3702 GN=CID10 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.5e-100
Identity = 189/285 (66.32%), Postives = 226/285 (79.30%), Query Frame = 0


Query: 120 INGADGGENFKRD----MRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFL 179
           +NG  G  N +RD    ++DL D  SKLNPMA+EFVPPSLA++ SG      LG+TN+F 
Sbjct: 72  LNGFSG--NGERDNNGEIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFA 131

Query: 180 LQANSLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLAT 239
                L +           F QG+R+ N + +  ++D++ RRTVYVSDIDQQVTEE LA 
Sbjct: 132 APP-KLADGNDHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAG 191

Query: 240 VFANCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIA 299
           VF NCG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIA
Sbjct: 192 VFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIA 251

Query: 300 PVNPEFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 359
           PVNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TR
Sbjct: 252 PVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTR 311

Query: 360 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 401
           IAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 312 IAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of Carg15040 vs. Swiss-Prot
Match: sp|Q9LRR6|CID9_ARATH (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3702 GN=CID9 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.9e-85
Identity = 166/279 (59.50%), Postives = 203/279 (72.76%), Query Frame = 0


Query: 132 DMRDLEDLLSKLNPMAEEFVPP----------SLAKNF--SGYFGGAALGYTNDFLLQAN 191
           DM  L  +  KLNP+A+EF P           + A  F  +  F         +F L A 
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 192 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 251
             +N           +SQGRR+   +++  +R++  RRTVYVSDIDQ VTEE LA +F+N
Sbjct: 109 KDDN-----TRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSN 168

Query: 252 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 311
           CG+VVDCRICGDP+S+L FAF+EF D++GA  +L+L GT+LGFYPVRVLPSKTAI PVNP
Sbjct: 169 CGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNP 228

Query: 312 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 371
            FLPRS+DEREMC+RTIYCTNIDKKV+QA+V+ FFES CGEV RLRLLGD  HSTRIAFV
Sbjct: 229 TFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFV 288

Query: 372 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 399
           EF +A+SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 EFALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]

BLAST of Carg15040 vs. Swiss-Prot
Match: sp|Q9C8M0|CID8_ARATH (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3702 GN=CID8 PE=1 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 3.7e-83
Identity = 160/271 (59.04%), Postives = 201/271 (74.17%), Query Frame = 0


Query: 133 MRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLL---QANSLNNEGXXXX 192
           M+ L  +  KLNP A+EF  PS  +N            ++DF++    +   N +     
Sbjct: 50  MKKLVAMFKKLNPEAKEFF-PSYKRN---------TNQSDDFVIAIKPSGEDNKKVAINR 109

Query: 193 XXXXGFSQGRR-KTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANCGEVVDCRI 252
                ++QGRR +   + +  +R++  RRTVYVSDIDQ VTEE LA +F++CG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 253 CGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPEFLPRSDDE 312
           CGDPNS+L FAF+EF+D++GAR++L+L GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 313 REMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAI 372
           REMCSRTIYCTN+DK  T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MAESA+
Sbjct: 230 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 289

Query: 373 AALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 400
           AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 AALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]

BLAST of Carg15040 vs. TrEMBL
Match: tr|A0A0A0KZ10|A0A0A0KZ10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090360 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 5.5e-201
Identity = 360/403 (89.33%), Postives = 374/403 (92.80%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAENVGPKIGSPSQ+ +NT+VSSDSND   VENQKP NDS + INA+ DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQM-GQMQNGFETNAQSLMVKSAAGYGMNQRPNGV 120
            QKK HLQ+RAAAATSF+LPSPNFKPQM GQMQNGFETN QSLMV SA+ YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 240
           S+NNEG        GFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           +FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Carg15040 vs. TrEMBL
Match: tr|A0A1S3CI01|A0A1S3CI01_CUCME (polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo OX=3656 GN=LOC103501175 PE=4 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 1.6e-200
Identity = 359/403 (89.08%), Postives = 373/403 (92.56%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAENVGPKIGSPSQ+ +NT+VSSDSND   VENQKP NDS + INA+ DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQM-GQMQNGFETNAQSLMVKSAAGYGMNQRPNGV 120
            QKK HLQ+RA AATSF+LPSPNFKPQM GQMQNGFETN QSLMV SA+ YGMNQRPNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 121 INGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQAN 180
           INGADGG+ FKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 181 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 240
           S+NNEG        GFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 301 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
           +FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of Carg15040 vs. TrEMBL
Match: tr|A0A2P5EDN9|A0A2P5EDN9_9ROSA (Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_204580 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.7e-146
Identity = 280/403 (69.48%), Postives = 317/403 (78.66%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAEN  PK       F++T+VSS SN   D E  KP+NDS+  ++ EPDF  N  DQN
Sbjct: 1   MAVAEN-APK-------FDDTVVSSASNGQNDAETPKPRNDSSGVLSVEPDFQSNKDDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGVI 120
           + +K   QE+AA  T F++P+ N KPQ GQMQNGFETN     V  + G G++ R NG+ 
Sbjct: 61  SPRKFQSQEKAANPTGFSVPTSNQKPQNGQMQNGFETNG----VVKSGGLGIDHRENGLR 120

Query: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQA-N 180
           NG DG E+FK DMRDLEDLLSKLNPMAEEFVPPSLAKN  GY  GA  GY  + LL   N
Sbjct: 121 NGGDGDESFKHDMRDLEDLLSKLNPMAEEFVPPSLAKN-PGYPIGAGFGYAGNILLHINN 180

Query: 181 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 240
           S +  G        G+SQGRR+  +K++  +RD M RRTVYVSDIDQQVTEE LA +F  
Sbjct: 181 SGDGNGLLGRKKKNGYSQGRRRNYHKLSPAQRDAMIRRTVYVSDIDQQVTEENLAALFLG 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CG+VVDCR+CGDPNSIL FAF+EFTDEEGAR +LNLSGT+LG+YPVRVLPSKTAIAPVNP
Sbjct: 241 CGQVVDCRVCGDPNSILRFAFVEFTDEEGARTALNLSGTMLGYYPVRVLPSKTAIAPVNP 300

Query: 301 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
            FLPRSDDEREMCSRTIYCTNIDKKVTQA+VKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 TFLPRSDDEREMCSRTIYCTNIDKKVTQADVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           EFTMAESAIAALNCSGVVLG+LPIRVSPSKTPVRPR+PR  L+
Sbjct: 361 EFTMAESAIAALNCSGVVLGTLPIRVSPSKTPVRPRAPRPMLH 390

[Close]

BLAST of Carg15040 vs. TrEMBL
Match: tr|M5XCM1|M5XCM1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G318100 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 6.6e-146
Identity = 281/406 (69.21%), Postives = 322/406 (79.31%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAEN        + +F+NT VSSDSN   D+ N KP+ DS+V ++AEP+   N  DQN
Sbjct: 1   MAVAEN--------APNFDNTAVSSDSNAQNDLANPKPRVDSSVVLSAEPNLQSNGDDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQMGQMQNGFETNA----QSLMVKSAAGYGMNQRP 120
            Q K   QE+    T+ ++P+ N KPQMGQMQNGF+TN     Q + VKS  GYG++QR 
Sbjct: 61  PQDKFQNQEK---VTTLSVPTSNHKPQMGQMQNGFDTNGVDNHQMVAVKS-GGYGIDQRS 120

Query: 121 NGVINGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLL 180
           NGV NG DG E+FKRDMRDLE+LLSKLNPMA+EFVPPSL  N  G+      GY N+FL+
Sbjct: 121 NGVRNGGDGDESFKRDMRDLEELLSKLNPMAKEFVPPSLVNN-HGFSLAGGFGYANNFLV 180

Query: 181 QANSLNNEGXXXXXXXXGF-SQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLAT 240
           Q NS N  G        G+ SQGRRK   KM+  +R+EM RRTVYVSDIDQQVTEE LA 
Sbjct: 181 QINSDNANGLIGRRKKNGYSSQGRRKNYYKMSLAQREEMIRRTVYVSDIDQQVTEENLAA 240

Query: 241 VFANCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIA 300
           +F +CG+VVDCR+CGDPNSIL FAF+EFTDEEGAR +L+LSGT+LG+YPVRVLPSKTAIA
Sbjct: 241 LFLSCGQVVDCRVCGDPNSILRFAFVEFTDEEGARVALSLSGTMLGYYPVRVLPSKTAIA 300

Query: 301 PVNPEFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTR 360
           PVNP FLPRSDDEREMCSRTIYCTNIDKKVTQA+VKLFFESLCGEVQRLRLLGDYHHSTR
Sbjct: 301 PVNPTFLPRSDDEREMCSRTIYCTNIDKKVTQADVKLFFESLCGEVQRLRLLGDYHHSTR 360

Query: 361 IAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQL 402
           IAFVEFT+AESAIAALNCSGVVLGSLPIRVSPSKTPVRPR+PR+ L
Sbjct: 361 IAFVEFTVAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRSPL 393

[Close]

BLAST of Carg15040 vs. TrEMBL
Match: tr|A0A2P5DFD1|A0A2P5DFD1_PARAD (Splicing factor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_068230 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 2.5e-145
Identity = 278/403 (68.98%), Postives = 316/403 (78.41%), Query Frame = 0


Query: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDLKDVENQKPKNDSAVSINAEPDFHPNAIDQN 60
           MAVAEN  PK       F++T+VSS SN   D E  KP+NDS+  ++ EPDF  N  DQN
Sbjct: 1   MAVAEN-APK-------FDDTVVSSASNGQNDAETPKPRNDSSGVLSVEPDFQSNKDDQN 60

Query: 61  TQKKAHLQERAAAATSFALPSPNFKPQMGQMQNGFETNAQSLMVKSAAGYGMNQRPNGVI 120
           + +K   QE+AA  T F++P+ N KPQ GQMQNGFETN     V  + G G++ R NG+ 
Sbjct: 61  SPRKFQSQEKAANPTGFSVPTSNQKPQNGQMQNGFETNG----VVKSGGLGIDHRDNGLR 120

Query: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQA-N 180
           NG DG E+ K D+RDLEDLLSKLNPMAEEFVPPSLAKN  GY  GA  GY  + LL   N
Sbjct: 121 NGGDGDESLKHDIRDLEDLLSKLNPMAEEFVPPSLAKN-PGYPIGAGFGYAGNILLHINN 180

Query: 181 SLNNEGXXXXXXXXGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAN 240
           S N  G        G+SQGRR+  +K++  +RD M RRTVYVSDIDQQVTEE LA +F  
Sbjct: 181 SGNGNGLLGRKKKNGYSQGRRRNYHKLSPAQRDAMIRRTVYVSDIDQQVTEENLAALFIG 240

Query: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300
           CG+VVDCR+CGDPNSIL FAF+EFTDEEGAR +LNLSGT+LG+YPVRVLPSKTAIAPVNP
Sbjct: 241 CGQVVDCRVCGDPNSILRFAFVEFTDEEGARTALNLSGTMLGYYPVRVLPSKTAIAPVNP 300

Query: 301 EFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360
            FLPRS+DEREMCSRTIYCTNIDKKVTQA+VKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 TFLPRSNDEREMCSRTIYCTNIDKKVTQADVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
           EFTMAESAIAALNCSGVVLG+LPIRVSPSKTPVRPR+PR  L+
Sbjct: 361 EFTMAESAIAALNCSGVVLGTLPIRVSPSKTPVRPRAPRPMLH 390

The following BLAST results are available for this feature:

BLAST of Carg15040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922600.1	7.5e-218	99.00	polyadenylate-binding protein-interacting protein 12 [Cucurbita moschata] >XP_02...	[more]
XP_022984928.1	3.7e-217	98.51	polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima] >XP_0229...	[more]
XP_023552522.1	2.4e-216	98.51	polyadenylate-binding protein-interacting protein 12 [Cucurbita pepo subsp. pepo...	[more]
XP_004137206.1	8.3e-201	89.33	PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis sativus...	[more]
XP_008462907.1	2.4e-200	89.08	PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo]	[more]

BLAST of Carg15040 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10610.1	6.5e-107	61.54	CTC-interacting domain 12	[more]
AT3G49390.1	8.2e-102	66.32	CTC-interacting domain 10	[more]
AT1G32790.2	2.9e-99	70.22	CTC-interacting domain 11	[more]
AT3G14450.1	2.2e-86	59.50	CTC-interacting domain 9	[more]
AT1G53650.1	2.0e-84	59.04	CTC-interacting domain 8	[more]

BLAST of Carg15040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LPI5\|CID11_ARATH	6.9e-106	71.83	Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=...	[more]
sp\|Q9S7N9\|CID12_ARATH	1.2e-105	61.54	Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=...	[more]
sp\|Q9SG10\|CID10_ARATH	1.5e-100	66.32	Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=...	[more]
sp\|Q9LRR6\|CID9_ARATH	3.9e-85	59.50	Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q9C8M0\|CID8_ARATH	3.7e-83	59.04	Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Carg15040 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KZ10\|A0A0A0KZ10_CUCSA	5.5e-201	89.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090360 PE=4 SV=1	[more]
tr\|A0A1S3CI01\|A0A1S3CI01_CUCME	1.6e-200	89.08	polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A2P5EDN9\|A0A2P5EDN9_9ROSA	1.7e-146	69.48	Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_204580 P...	[more]
tr\|M5XCM1\|M5XCM1_PRUPE	6.6e-146	69.21	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G318100 PE=4 SV=1	[more]
tr\|A0A2P5DFD1\|A0A2P5DFD1_PARAD	2.5e-145	68.98	Splicing factor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_0682...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR034823	CID8_like_RRM1
IPR034825	CID8_like_RRM2
IPR009818	Ataxin-2_C
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15040-RA	Carg15040-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 218..288 e-value: 4.8E-13 score: 59.3 coord: 315..386 e-value: 1.9E-11 score: 54.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 219..281 e-value: 9.6E-11 score: 41.3 coord: 316..383 e-value: 7.8E-9 score: 35.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 314..390 score: 11.929
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 217..292 score: 13.225
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 177..294 e-value: 5.7E-17 score: 64.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 314..386 e-value: 8.4E-14 score: 53.3
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 141..154 e-value: 3.2E-5 score: 23.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..205
None	No IPR available	PANTHER	PTHR44161	FAMILY NOT NAMED	coord: 1..402
None	No IPR available	PANTHER	PTHR44161:SF2	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 10-RELATED	coord: 1..402
IPR034825	CID8-like protein, RNA recognition motif 2	CDD	cd12460	RRM2_CID8_like	coord: 310..391 e-value: 3.59971E-59 score: 188.474
IPR034823	CID8-like protein, RNA recognition motif 1	CDD	cd12459	RRM1_CID8_like	coord: 216..294 e-value: 3.54458E-49 score: 162.205
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 304..396
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 181..293

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15040	CSPI04G08330	Wild cucumber (PI 183967)	carcpiB1028
Carg15040	Cucsa.273320	Cucumber (Gy14) v1	carcgyB1108
Carg15040	CmaCh16G000210	Cucurbita maxima (Rimu)	carcmaB1366
Carg15040	CmaCh18G013390	Cucurbita maxima (Rimu)	carcmaB1368
Carg15040	CmoCh16G000260	Cucurbita moschata (Rifu)	carcmoB1326
Carg15040	CmoCh18G013730	Cucurbita moschata (Rifu)	carcmoB1328
Carg15040	Lsi07G003190	Bottle gourd (USVL1VR-Ls)	carlsiB905
Carg15040	Cp4.1LG14g07120	Cucurbita pepo (Zucchini)	carcpeB1376
Carg15040	Cp4.1LG09g00050	Cucurbita pepo (Zucchini)	carcpeB1373
Carg15040	CsaV3_4G008520	Cucumber (Chinese Long) v3	carcucB1034

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15040	Carg20317	Silver-seed gourd	carcarB503

The following block(s) are covering this gene:

None