Lsi07G000390 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G000390
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Histone demethylase UTY
Location	chr07 : 458225 .. 459007 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCTCTTCCATTACCGCCGATCAGAGCCTCGGCTACAATAGTTCCGATGAACAAGTTGCAGAGGAGACCAATTCTGATGGAGATGAGTCCATGCGGCTATCTTTAAATTTCGAGAGCCGCTGGAGTCTTTTGAACTCATTCCCAGCTTTCTTTCTGTCCTTGCTGAATCTTGATAGCGAAGATTCGAAGCTGATTCCAGACGGACAGCTCGATTTCGATTTTGAAGTGAAATCAGCAGGATTTGTGGCAATCGAAGACGATGTTCGCGACGGACCGTTGTTCTGGCCGCTCGAACATGAAATCGAATGGAAATCGATGGAGGATTGGGACTTGTTCGCAATTTCACCGCGGAAAAAGGATTTGAAATCTTCTGCTACGCCTCTGAACTCCACCGGATTGCGATTTCACGGACGGAAAATAACACAGAATCAGATGCCAAAGAGGAGGCTCATGTTCAACTCGAGATCGGCGGCATCGGAGATGATGGAGTTGAAGCAGAGGCGTGATACGAAAGCTAATGTTCCGAGGATCGGTGCTGTTCCTTCGAGATTCAACAGGGGAACCAGAAATTCCGCCGGAAAACGTTCTGATGAGAAATTAATCGCCGTGGATAAAGATTTCGTGGAGAAGGACTTGGCGGCGCGTGAAGAAATTCCGATCGAAACGTTGCTAGGGCTTCGTGAATTCGATGGCCACGAGGGATTCGGTTCAGAGTTCGATGACATTGCGTTATCTCTTGATGAAGATGAAACCTGTAATCAACTTGCCTTGGTATAA

mRNA sequence

ATGGAAATCTCTTCCATTACCGCCGATCAGAGCCTCGGCTACAATAGTTCCGATGAACAAGTTGCAGAGGAGACCAATTCTGATGGAGATGAGTCCATGCGGCTATCTTTAAATTTCGAGAGCCGCTGGAGTCTTTTGAACTCATTCCCAGCTTTCTTTCTGTCCTTGCTGAATCTTGATAGCGAAGATTCGAAGCTGATTCCAGACGGACAGCTCGATTTCGATTTTGAAGTGAAATCAGCAGGATTTGTGGCAATCGAAGACGATGTTCGCGACGGACCGTTGTTCTGGCCGCTCGAACATGAAATCGAATGGAAATCGATGGAGGATTGGGACTTGTTCGCAATTTCACCGCGGAAAAAGGATTTGAAATCTTCTGCTACGCCTCTGAACTCCACCGGATTGCGATTTCACGGACGGAAAATAACACAGAATCAGATGCCAAAGAGGAGGCTCATGTTCAACTCGAGATCGGCGGCATCGGAGATGATGGAGTTGAAGCAGAGGCGTGATACGAAAGCTAATGTTCCGAGGATCGGTGCTGTTCCTTCGAGATTCAACAGGGGAACCAGAAATTCCGCCGGAAAACGTTCTGATGAGAAATTAATCGCCGTGGATAAAGATTTCGTGGAGAAGGACTTGGCGGCGCGTGAAGAAATTCCGATCGAAACGTTGCTAGGGCTTCGTGAATTCGATGGCCACGAGGGATTCGGTTCAGAGTTCGATGACATTGCGTTATCTCTTGATGAAGATGAAACCTGTAATCAACTTGCCTTGGTATAA

Coding sequence (CDS)

ATGGAAATCTCTTCCATTACCGCCGATCAGAGCCTCGGCTACAATAGTTCCGATGAACAAGTTGCAGAGGAGACCAATTCTGATGGAGATGAGTCCATGCGGCTATCTTTAAATTTCGAGAGCCGCTGGAGTCTTTTGAACTCATTCCCAGCTTTCTTTCTGTCCTTGCTGAATCTTGATAGCGAAGATTCGAAGCTGATTCCAGACGGACAGCTCGATTTCGATTTTGAAGTGAAATCAGCAGGATTTGTGGCAATCGAAGACGATGTTCGCGACGGACCGTTGTTCTGGCCGCTCGAACATGAAATCGAATGGAAATCGATGGAGGATTGGGACTTGTTCGCAATTTCACCGCGGAAAAAGGATTTGAAATCTTCTGCTACGCCTCTGAACTCCACCGGATTGCGATTTCACGGACGGAAAATAACACAGAATCAGATGCCAAAGAGGAGGCTCATGTTCAACTCGAGATCGGCGGCATCGGAGATGATGGAGTTGAAGCAGAGGCGTGATACGAAAGCTAATGTTCCGAGGATCGGTGCTGTTCCTTCGAGATTCAACAGGGGAACCAGAAATTCCGCCGGAAAACGTTCTGATGAGAAATTAATCGCCGTGGATAAAGATTTCGTGGAGAAGGACTTGGCGGCGCGTGAAGAAATTCCGATCGAAACGTTGCTAGGGCTTCGTGAATTCGATGGCCACGAGGGATTCGGTTCAGAGTTCGATGACATTGCGTTATCTCTTGATGAAGATGAAACCTGTAATCAACTTGCCTTGGTATAA

Protein sequence

MEISSITADQSLGYNSSDEQVAEETNSDGDESMRLSLNFESRWSLLNSFPAFFLSLLNLDSEDSKLIPDGQLDFDFEVKSAGFVAIEDDVRDGPLFWPLEHEIEWKSMEDWDLFAISPRKKDLKSSATPLNSTGLRFHGRKITQNQMPKRRLMFNSRSAASEMMELKQRRDTKANVPRIGAVPSRFNRGTRNSAGKRSDEKLIAVDKDFVEKDLAAREEIPIETLLGLREFDGHEGFGSEFDDIALSLDEDETCNQLALV

Homology

[Close]

BLAST of Lsi07G000390 vs. TrEMBL
Match: A0A0A0KTY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015110 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.7e-88
Identity = 182/274 (66.42%), Postives = 207/274 (75.55%), Query Frame = 1


Query: 1   MEISSITADQSLGYNSSDEQVAEETNSDGDESMRLSLNFESRWSLLNSFPAFFLSLLNLD 60
           MEISS+TADQ   YNSSDEQVAE         +RL L+  +RW+ LNS PAF   LLNL+
Sbjct: 1   MEISSLTADQIHAYNSSDEQVAE---------IRLFLDSNNRWNFLNSSPAF---LLNLE 60

Query: 61  SEDSKLIPDGQLDFD----------------FEVKSAGFVAIEDDVRDGPLFWPLEHEIE 120
            EDSKLIPDG+ DFD                FEVK A     + ++RDGPLFWPLEHEI+
Sbjct: 61  REDSKLIPDGEFDFDWFQSNFPSPSFRSGFNFEVKLAAIEDADGEIRDGPLFWPLEHEIK 120

Query: 121 WKSMEDWDLFAISPRKKDLKSSATPLNS-TGLRFHGRKITQNQMPKRRLMFNSRSAASEM 180
           WKSMEDW+ FAISPRK++LKSS  PLNS  G+RF GRKIT NQ+PKRR +FNSRSAASEM
Sbjct: 121 WKSMEDWNWFAISPRKEELKSSTVPLNSNNGMRFQGRKITLNQVPKRRFVFNSRSAASEM 180

Query: 181 MELKQRRDTKANVPRIGAVPSRFNR-GTRNSAGKRSDEKLIAVDKDFVEKDLAAREEIPI 240
           MELK+RRD+KA VPRIGAVPSRFNR G RNS GK  +EKL+AVD+DF EKD A REEIP+
Sbjct: 181 MELKERRDSKACVPRIGAVPSRFNRPGNRNSVGKGWEEKLMAVDRDFEEKDRAGREEIPM 240

Query: 241 ETLLGLREFDGHEGFGSEFDDIALSLDEDETCNQ 257
           ETLLGLREFDG EG GSE D++ LSLDEDE CNQ
Sbjct: 241 ETLLGLREFDGREGLGSELDEVVLSLDEDEACNQ 262

[Close]

BLAST of Lsi07G000390 vs. TrEMBL
Match: B9HH69_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s02100g PE=4 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-28
Identity = 85/243 (34.98%), Postives = 133/243 (54.73%), Query Frame = 1


Query: 12  LGYNSSDEQVAEETNSDGDESMRLSLNFESRWSLLNSFPAFFLSLLNLDSEDSKLIPDGQ 71
           L  +  D +   +T  + D  +R S    S W   +S    F S  N+ +       DG 
Sbjct: 261 LSLDGDDSKWTSDTELESD-ILRSSFPSPSCWRSWSS--EAFSSSSNVSTPGK--FQDGH 320

Query: 72  L--DFDFEVKSAGFVAIEDDVRDGPLFWPLEHEIEWKSMEDWDLFAISPRKKDLKSSATP 131
           L  D   E  S+    ++D   DGPLFWP + +++W S EDW  FA+SPRK  L  S   
Sbjct: 321 LHRDLSLENSSSEAEVLKDFNTDGPLFWPFDKKLDWNSEEDWKCFAMSPRKDKLSISPQR 380

Query: 132 LNSTG--LRFHGRKITQNQMPKRRLMFNSRSAASEMMELKQRRDTKANVPRIGAVPSRFN 191
           ++S    ++FH  ++    + +RRL+F+S SAAS +ME KQRRD  ++  ++ ++PSR  
Sbjct: 381 ISSKSVEMKFHDSRVDSKMVCRRRLVFSSGSAASNIMEKKQRRDNNSSTKKMNSMPSRLK 440

Query: 192 RGTRNSAGKRSDEKLIAVDKDFVEKDLAAREEIPIETLLGLREFDGHEGFGSEFDDIALS 251
           +  ++  G+    K+ + + +  + D A+  ++PIE LLGL EFDGHEG  SEF++   S
Sbjct: 441 KSVKD--GRIPTPKVDSGNTNLSQDDFASNRKLPIEILLGLDEFDGHEGVDSEFNEGVFS 496

[Close]

BLAST of Lsi07G000390 vs. TrEMBL
Match: B9T5K5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1007940 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 86/250 (34.40%), Postives = 127/250 (50.80%), Query Frame = 1


Query: 26  NSDGDESMRLSLNFESRWSLLNSFPAFFL--SLLNLDSEDSKLIPDGQLDFDFEVKSAGF 85
           N DG++S  +S        L + FP+     S+ N  + +S++    +     E  S+  
Sbjct: 115 NLDGEDSKLISDEELDMDYLPSGFPSPSCNNSIYNDSTPNSEINKHTRYGMFSEHNSSDS 174

Query: 86  VAIEDDVRDGPLFWPLEHEIEWKSMEDWDLFAISPRKKDLKSSA---TPLNSTGLRFHGR 145
           + +ED   D PLFWP E + +W S E W  F++SPRK   +      T   S   +FH  
Sbjct: 175 LHLEDFSTDEPLFWPSECKRDWSSEETWKFFSMSPRKYTTELGMPRKTCSKSAESKFHVL 234

Query: 146 KITQNQMPKRRLMFNSRS-AASEMMELKQRRDT---KANVPRIGAVPSRFNRGTRNSAG- 205
           K+   +  +RRL F+S S  A +M+E KQR +T   K   P     PSR  R T +SA  
Sbjct: 235 KMDSRKDCRRRLDFSSVSIVAVKMLEHKQRSNTNYSKKIKPASSTTPSRLRRSTEHSAKI 294

Query: 206 ---------KRSDEKLIAVDK------DFVEKDLAAREEIPIETLLGLREFDGHEGFGSE 251
                    K++  + +AV K      D ++ D+ + EE+PIETLLGL EFDGHEG  SE
Sbjct: 295 VPIEMEDDIKQAKNREVAVAKLNCIHVDLLQDDIISNEELPIETLLGLGEFDGHEGVDSE 354

[Close]

BLAST of Lsi07G000390 vs. TrEMBL
Match: M5Y952_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017001mg PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.2e-19
Identity = 70/174 (40.23%), Postives = 94/174 (54.02%), Query Frame = 1


Query: 92  DGPLFWPLEHEIEWKSMEDWDLFAISPRKK-DLKSSATPLNSTGLRFHGRKITQNQMPKR 151
           D PLFWP E +I W S   W+ F++SPRK   + +  +P +S  L  H R I   +  +R
Sbjct: 86  DEPLFWPYEQKITWNSEATWNYFSMSPRKDISITTFGSPPDSVQLSHHDRSIGLKEGQRR 145

Query: 152 RLMFNSRSAASEMMELKQRRDTKANVPRIGAVPSRFNRGTRNSAG--------------- 211
            LMF+S SAAS++MELKQR +  A   R   +PSR +R T+ S                 
Sbjct: 146 SLMFSSGSAASKIMELKQRYNKGAR--RTNTLPSRLSRATKTSEKSVPLNMKDDTAELKD 205

Query: 212 -KRSDEKLIAVDKDFVEKDLAAREEIPIETLLGLREFDGHEGFGSEFDDIALSL 249
            K   E+ + + K  +EK  A++E +PIE  LGL EFDG EG  SEFD    SL
Sbjct: 206 RKAHVERPVGMVKAPIEKGSASKE-LPIEMFLGLDEFDGQEGVDSEFDKDDFSL 256

[Close]

BLAST of Lsi07G000390 vs. TrEMBL
Match: A0A061ERN2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_020116 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.2e-19
Identity = 65/189 (34.39%), Postives = 97/189 (51.32%), Query Frame = 1


Query: 86  IEDDVRDGPLFWPLEHEIEWKSMEDWDLFAISPRKKDLK---SSATPLNSTGLRFHGRKI 145
           +ED   D PLFWP + +I+W S E W+ F++SPRK+ +K   S  T   S     + R +
Sbjct: 318 VEDFSADEPLFWPFDRKIDWNSEETWEYFSMSPRKEIIKVTTSEGTSPRSIDSELNNRNV 377

Query: 146 TQNQMPKRRLMFNSRSAASEMMELKQRR-----DTKANVPRIGAVPSRFNRGTRNSA--- 205
                 +R+L+  S S AS+++EL +        +   V R  A+PSR    T++SA   
Sbjct: 378 YPPNRCRRKLVLKSGSTASKILELNRGNKGCDSSSSGRVKRGNAMPSRLRESTKDSAKIV 437

Query: 206 -------------GKRSDEKLIAVDKDFVEKDLAAREEIPIETLLGLREFDGHEGFGSEF 251
                        G+    K I   ++F E + ++ EE+ IE +LGL EFDGHEG  SEF
Sbjct: 438 PLDIDNQILPLKVGEVPTTKSILTGRNFWEDEFSSNEELSIEAVLGLGEFDGHEGIDSEF 497

[Close]

BLAST of Lsi07G000390 vs. TAIR10
Match: AT1G05894.1 (AT1G05894.1 unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.7e-10
Identity = 52/195 (26.67%), Postives = 83/195 (42.56%), Query Frame = 1


Query: 92  DGPLFWPLEHEIEWKSMEDWDLFAISPRKKDL-----KSSATPLNSTGLRFHGRKITQNQ 151
           D PLFWP E   +W   +    F++SPR+K L      + ++P +        RK+    
Sbjct: 261 DEPLFWPYEQRFDWTPEDILKHFSMSPRRKKLLNAKVSAGSSPRSMRAQLLQARKLDLKD 320

Query: 152 MPKRRLMFNS-RSAASEMMELKQRRDTKAN-----------VPRIGAVPSRFNRGTRNS- 211
             KR+L+FN   + A+++ ELK+    K N           V R  ++PSR    ++   
Sbjct: 321 GSKRKLVFNGPLTNAAKIPELKRNNSNKKNDSIKNEPIRNCVKRNKSLPSRLRNSSKTCS 380

Query: 212 ------------AGKRSDEKLIA------VDKDFVEKDLAAREEIPIETLLGLREFDGHE 251
                       A +R+  ++ A        K  +E D +   +  IE  +GL EF G E
Sbjct: 381 KVVPFEVAEEVIAAERAKVEITARKLINRRSKTMLEDDFSLMNDFSIENAVGLGEFKGRE 440

[Close]

BLAST of Lsi07G000390 vs. TAIR10
Match: AT2G31480.1 (AT2G31480.1 unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-07
Identity = 50/215 (23.26%), Postives = 83/215 (38.60%), Query Frame = 1


Query: 79  KSAGFVAIEDDVRDGPLFWPLEHEIEWKSMEDWDLFAISPRKK---DLKSSATPLNSTGL 138
           KSA     +  +   PLFWP E + +W   +    F++SPR+K     K + T   S   
Sbjct: 256 KSAEIGVTKSKIVVEPLFWPFEQKFDWTPEDILKHFSMSPRRKKSLGSKIAGTSPRSMRA 315

Query: 139 RFHGRKITQNQMPKRRLMFN----------------SRSAASEMMELKQRRDTKANVPRI 198
           +   RK+   +  KR+LMFN                + S +S    +K+   +K   P  
Sbjct: 316 QLQTRKLDLKEGCKRKLMFNGPGSNSKPTRIPELNRTISNSSNNSSMKKTEISKNQQPIR 375

Query: 199 GAVPSRFNRGTRNSAGKRSDEKLIAVD------------------------KDFVEKDLA 251
            +V    +  +R     +   K++ ++                        + F+E D A
Sbjct: 376 NSVKRNKSLPSRLRKSSKISSKVVPIEAAEESGEIVKEQKTPKKLIMTRKSRTFLEDDFA 435

[Close]

BLAST of Lsi07G000390 vs. NCBI nr
Match: gi|778690009|ref|XP_011653051.1| (PREDICTED: uncharacterized protein LOC105435170 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 5.4e-88
Identity = 182/274 (66.42%), Postives = 207/274 (75.55%), Query Frame = 1


Query: 1   MEISSITADQSLGYNSSDEQVAEETNSDGDESMRLSLNFESRWSLLNSFPAFFLSLLNLD 60
           MEISS+TADQ   YNSSDEQVAE         +RL L+  +RW+ LNS PAF   LLNL+
Sbjct: 31  MEISSLTADQIHAYNSSDEQVAE---------IRLFLDSNNRWNFLNSSPAF---LLNLE 90

Query: 61  SEDSKLIPDGQLDFD----------------FEVKSAGFVAIEDDVRDGPLFWPLEHEIE 120
            EDSKLIPDG+ DFD                FEVK A     + ++RDGPLFWPLEHEI+
Sbjct: 91  REDSKLIPDGEFDFDWFQSNFPSPSFRSGFNFEVKLAAIEDADGEIRDGPLFWPLEHEIK 150

Query: 121 WKSMEDWDLFAISPRKKDLKSSATPLNS-TGLRFHGRKITQNQMPKRRLMFNSRSAASEM 180
           WKSMEDW+ FAISPRK++LKSS  PLNS  G+RF GRKIT NQ+PKRR +FNSRSAASEM
Sbjct: 151 WKSMEDWNWFAISPRKEELKSSTVPLNSNNGMRFQGRKITLNQVPKRRFVFNSRSAASEM 210

Query: 181 MELKQRRDTKANVPRIGAVPSRFNR-GTRNSAGKRSDEKLIAVDKDFVEKDLAAREEIPI 240
           MELK+RRD+KA VPRIGAVPSRFNR G RNS GK  +EKL+AVD+DF EKD A REEIP+
Sbjct: 211 MELKERRDSKACVPRIGAVPSRFNRPGNRNSVGKGWEEKLMAVDRDFEEKDRAGREEIPM 270

Query: 241 ETLLGLREFDGHEGFGSEFDDIALSLDEDETCNQ 257
           ETLLGLREFDG EG GSE D++ LSLDEDE CNQ
Sbjct: 271 ETLLGLREFDGREGLGSELDEVVLSLDEDEACNQ 292

[Close]

BLAST of Lsi07G000390 vs. NCBI nr
Match: gi|700197912|gb|KGN53070.1| (hypothetical protein Csa_4G015110 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 5.4e-88
Identity = 182/274 (66.42%), Postives = 207/274 (75.55%), Query Frame = 1


Query: 1   MEISSITADQSLGYNSSDEQVAEETNSDGDESMRLSLNFESRWSLLNSFPAFFLSLLNLD 60
           MEISS+TADQ   YNSSDEQVAE         +RL L+  +RW+ LNS PAF   LLNL+
Sbjct: 1   MEISSLTADQIHAYNSSDEQVAE---------IRLFLDSNNRWNFLNSSPAF---LLNLE 60

Query: 61  SEDSKLIPDGQLDFD----------------FEVKSAGFVAIEDDVRDGPLFWPLEHEIE 120
            EDSKLIPDG+ DFD                FEVK A     + ++RDGPLFWPLEHEI+
Sbjct: 61  REDSKLIPDGEFDFDWFQSNFPSPSFRSGFNFEVKLAAIEDADGEIRDGPLFWPLEHEIK 120

Query: 121 WKSMEDWDLFAISPRKKDLKSSATPLNS-TGLRFHGRKITQNQMPKRRLMFNSRSAASEM 180
           WKSMEDW+ FAISPRK++LKSS  PLNS  G+RF GRKIT NQ+PKRR +FNSRSAASEM
Sbjct: 121 WKSMEDWNWFAISPRKEELKSSTVPLNSNNGMRFQGRKITLNQVPKRRFVFNSRSAASEM 180

Query: 181 MELKQRRDTKANVPRIGAVPSRFNR-GTRNSAGKRSDEKLIAVDKDFVEKDLAAREEIPI 240
           MELK+RRD+KA VPRIGAVPSRFNR G RNS GK  +EKL+AVD+DF EKD A REEIP+
Sbjct: 181 MELKERRDSKACVPRIGAVPSRFNRPGNRNSVGKGWEEKLMAVDRDFEEKDRAGREEIPM 240

Query: 241 ETLLGLREFDGHEGFGSEFDDIALSLDEDETCNQ 257
           ETLLGLREFDG EG GSE D++ LSLDEDE CNQ
Sbjct: 241 ETLLGLREFDGREGLGSELDEVVLSLDEDEACNQ 262

[Close]

BLAST of Lsi07G000390 vs. NCBI nr
Match: gi|743842195|ref|XP_011026642.1| (PREDICTED: uncharacterized protein LOC105127174 [Populus euphratica])

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28
Identity = 84/243 (34.57%), Postives = 136/243 (55.97%), Query Frame = 1


Query: 12  LGYNSSDEQVAEETNSDGDESMRLSLNFESRWSLLNSFPAFFLSLLNLDSEDSKLIPDGQ 71
           L  +  D +   +T  + D  +R S    S W   +S    F S  N+ +       DG 
Sbjct: 229 LSLDGDDSKWTSDTELESD-ILRSSFPSPSCWRSRSS--EAFSSSSNVSTPGK--FKDGH 288

Query: 72  L--DFDFEVKSAGFVAIEDDVRDGPLFWPLEHEIEWKSMEDWDLFAISPRKKDLKSSATP 131
           L  D   E  S+    ++D   DGPLFWP + +++W + E+W  FA+SPRK  L  S   
Sbjct: 289 LHGDLSLENSSSEAEVLKDFNTDGPLFWPFDKKLDWNAEENWKCFAMSPRKDKLSISPQR 348

Query: 132 LNSTG--LRFHGRKITQNQMPKRRLMFNSRSAASEMMELKQRRDTKANVPRIGAVPSRFN 191
           ++S    ++FHG ++    + +RRL+F+S SAAS ++E KQRRD  ++  ++ ++PSR  
Sbjct: 349 ISSKSVEMKFHGSRVDSKLVSRRRLVFSSGSAASNILEKKQRRDNNSSTKKMNSMPSRLK 408

Query: 192 RGTRNSAGKRSDEKLIAVDKDFVEKDLAAREEIPIETLLGLREFDGHEGFGSEFDDIALS 251
           +  ++  G+    K+ + + +F + D A+ +++PIE LLGL EFDGHEG  SEF++   S
Sbjct: 409 KSVKD--GRIPTPKVDSGNANFSQDDFASNKKLPIEILLGLDEFDGHEGVDSEFNEDVFS 464

[Close]

BLAST of Lsi07G000390 vs. NCBI nr
Match: gi|566179158|ref|XP_002310442.2| (hypothetical protein POPTR_0007s02100g [Populus trichocarpa])

HSP 1 Score: 133.3 bits (334), Expect = 6.3e-28
Identity = 85/243 (34.98%), Postives = 133/243 (54.73%), Query Frame = 1


Query: 12  LGYNSSDEQVAEETNSDGDESMRLSLNFESRWSLLNSFPAFFLSLLNLDSEDSKLIPDGQ 71
           L  +  D +   +T  + D  +R S    S W   +S    F S  N+ +       DG 
Sbjct: 261 LSLDGDDSKWTSDTELESD-ILRSSFPSPSCWRSWSS--EAFSSSSNVSTPGK--FQDGH 320

Query: 72  L--DFDFEVKSAGFVAIEDDVRDGPLFWPLEHEIEWKSMEDWDLFAISPRKKDLKSSATP 131
           L  D   E  S+    ++D   DGPLFWP + +++W S EDW  FA+SPRK  L  S   
Sbjct: 321 LHRDLSLENSSSEAEVLKDFNTDGPLFWPFDKKLDWNSEEDWKCFAMSPRKDKLSISPQR 380

Query: 132 LNSTG--LRFHGRKITQNQMPKRRLMFNSRSAASEMMELKQRRDTKANVPRIGAVPSRFN 191
           ++S    ++FH  ++    + +RRL+F+S SAAS +ME KQRRD  ++  ++ ++PSR  
Sbjct: 381 ISSKSVEMKFHDSRVDSKMVCRRRLVFSSGSAASNIMEKKQRRDNNSSTKKMNSMPSRLK 440

Query: 192 RGTRNSAGKRSDEKLIAVDKDFVEKDLAAREEIPIETLLGLREFDGHEGFGSEFDDIALS 251
           +  ++  G+    K+ + + +  + D A+  ++PIE LLGL EFDGHEG  SEF++   S
Sbjct: 441 KSVKD--GRIPTPKVDSGNTNLSQDDFASNRKLPIEILLGLDEFDGHEGVDSEFNEGVFS 496

[Close]

BLAST of Lsi07G000390 vs. NCBI nr
Match: gi|223526606|gb|EEF28854.1| (hypothetical protein RCOM_1007940 [Ricinus communis])

HSP 1 Score: 108.2 bits (269), Expect = 2.2e-20
Identity = 86/250 (34.40%), Postives = 127/250 (50.80%), Query Frame = 1


Query: 26  NSDGDESMRLSLNFESRWSLLNSFPAFFL--SLLNLDSEDSKLIPDGQLDFDFEVKSAGF 85
           N DG++S  +S        L + FP+     S+ N  + +S++    +     E  S+  
Sbjct: 115 NLDGEDSKLISDEELDMDYLPSGFPSPSCNNSIYNDSTPNSEINKHTRYGMFSEHNSSDS 174

Query: 86  VAIEDDVRDGPLFWPLEHEIEWKSMEDWDLFAISPRKKDLKSSA---TPLNSTGLRFHGR 145
           + +ED   D PLFWP E + +W S E W  F++SPRK   +      T   S   +FH  
Sbjct: 175 LHLEDFSTDEPLFWPSECKRDWSSEETWKFFSMSPRKYTTELGMPRKTCSKSAESKFHVL 234

Query: 146 KITQNQMPKRRLMFNSRS-AASEMMELKQRRDT---KANVPRIGAVPSRFNRGTRNSAG- 205
           K+   +  +RRL F+S S  A +M+E KQR +T   K   P     PSR  R T +SA  
Sbjct: 235 KMDSRKDCRRRLDFSSVSIVAVKMLEHKQRSNTNYSKKIKPASSTTPSRLRRSTEHSAKI 294

Query: 206 ---------KRSDEKLIAVDK------DFVEKDLAAREEIPIETLLGLREFDGHEGFGSE 251
                    K++  + +AV K      D ++ D+ + EE+PIETLLGL EFDGHEG  SE
Sbjct: 295 VPIEMEDDIKQAKNREVAVAKLNCIHVDLLQDDIISNEELPIETLLGLGEFDGHEGVDSE 354

The following BLAST results are available for this feature:

BLAST of Lsi07G000390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G000390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTY2_CUCSA	3.7e-88	66.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015110 PE=4 SV=1	[more]
B9HH69_POPTR	4.4e-28	34.98	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s02100g PE=4 SV=2	[more]
B9T5K5_RICCO	1.5e-20	34.40	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1007940 PE=4 SV=1	[more]
M5Y952_PRUPE	2.2e-19	40.23	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017001mg PE=4 S...	[more]
A0A061ERN2_THECC	2.2e-19	34.39	Uncharacterized protein OS=Theobroma cacao GN=TCM_020116 PE=4 SV=1	[more]

BLAST of Lsi07G000390 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05894.1	3.7e-10	26.67	unknown protein	[more]
AT2G31480.1	2.2e-07	23.26	unknown protein	[more]

BLAST of Lsi07G000390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778690009\|ref\|XP_011653051.1\|	5.4e-88	66.42	PREDICTED: uncharacterized protein LOC105435170 [Cucumis sativus]	[more]
gi\|700197912\|gb\|KGN53070.1\|	5.4e-88	66.42	hypothetical protein Csa_4G015110 [Cucumis sativus]	[more]
gi\|743842195\|ref\|XP_011026642.1\|	2.2e-28	34.57	PREDICTED: uncharacterized protein LOC105127174 [Populus euphratica]	[more]
gi\|566179158\|ref\|XP_002310442.2\|	6.3e-28	34.98	hypothetical protein POPTR_0007s02100g [Populus trichocarpa]	[more]
gi\|223526606\|gb\|EEF28854.1\|	2.2e-20	34.40	hypothetical protein RCOM_1007940 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G000390.1	Lsi07G000390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36707	FAMILY NOT NAMED	coord: 61..253 score: 7.2E-20coord: 1..37 score: 7.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G000390	Csa4G015110	Cucumber (Chinese Long) v2	culsiB303
Lsi07G000390	CSPI04G03290	Wild cucumber (PI 183967)	cpilsiB303
Lsi07G000390	Cucsa.094870	Cucumber (Gy14) v1	cgylsiB115
Lsi07G000390	CmoCh14G015060	Cucurbita moschata (Rifu)	cmolsiB242
Lsi07G000390	Cla010853	Watermelon (97103) v1	lsiwmB442
Lsi07G000390	MELO3C017723	Melon (DHL92) v3.5.1	lsimeB454
Lsi07G000390	ClCG07G015580	Watermelon (Charleston Gray)	lsiwcgB408
Lsi07G000390	MELO3C017723.2	Melon (DHL92) v3.6.1	lsimedB471
Lsi07G000390	Cla97C07G142590	Watermelon (97103) v2	lsiwmbB407
Lsi07G000390	Bhi01G002171	Wax gourd	lsiwgoB552
Lsi07G000390	Cp4.1LG03g12790	Cucurbita pepo (Zucchini)	cpelsiB513
Lsi07G000390	CsGy4G003170	Cucumber (Gy14) v2	cgyblsiB277
Lsi07G000390	Carg27249	Silver-seed gourd	carlsiB360
Lsi07G000390	CsaV3_4G003270	Cucumber (Chinese Long) v3	cuclsiB322

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G000390	Cucumber (Gy14) v2	cgyblsiB284
Lsi07G000390	Silver-seed gourd	carlsiB634
Lsi07G000390	Cucumber (Chinese Long) v3	cuclsiB330
Lsi07G000390	Cucurbita maxima (Rimu)	cmalsiB254
Lsi07G000390	Cucurbita maxima (Rimu)	cmalsiB777
Lsi07G000390	Cucurbita moschata (Rifu)	cmolsiB768
Lsi07G000390	Cucurbita pepo (Zucchini)	cpelsiB723
Lsi07G000390	Cucumber (Chinese Long) v2	culsiB311