Lsi06G008100 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G008100
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr06 : 17028516 .. 17029712 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCGCACTCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTCGTTTTCAGGGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTTCGTTTCTTCAACTGGGCTTGCACTCACAACCCCTCTTACCAACCCACTACCCTTGAATTTGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACGACGATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTTAAAATTTCACCAGAAACGATATCGTTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTTGATAATGCGGTTACCATTTTCAATCAATGTTCTAAATCTATCGACTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCATTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCCGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGATATTTAGAATCTGCAAAGGTTATGGTTAGAAAAATGATAAAAGAAGGATCTGTGCCTGATATAGGGACTTTTAATTCTCTGATTGATGTTATATGCAACTCTGGAGAAGTTGATTTTTGCATTAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTGATTCCAGCAACTTCGAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGTTGTATTGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATTCTTAAAGGAATGTGTAAAAGGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCGGTGTACACAATGTTGATAACAATGTGTGGACGTGGTGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAGATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACCGATGGATTGAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

mRNA sequence

ATGGAGCGCACTCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTCGTTTTCAGGGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTTCGTTTCTTCAACTGGGCTTGCACTCACAACCCCTCTTACCAACCCACTACCCTTGAATTTGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACGACGATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTTAAAATTTCACCAGAAACGATATCGTTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTTGATAATGCGGTTACCATTTTCAATCAATGTTCTAAATCTATCGACTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCATTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCCGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGATATTTAGAATCTGCAAAGGTTATGGTTAGAAAAATGATAAAAGAAGGATCTGTGCCTGATATAGGGACTTTTAATTCTCTGATTGATGTTATATGCAACTCTGGAGAAGTTGATTTTTGCATTAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTGATTCCAGCAACTTCGAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGTTGTATTGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATTCTTAAAGGAATGTGTAAAAGGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCGGTGTACACAATGTTGATAACAATGTGTGGACGTGGTGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAGATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACCGATGGATTGAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

Coding sequence (CDS)

ATGGAGCGCACTCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTCGTTTTCAGGGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTTCGTTTCTTCAACTGGGCTTGCACTCACAACCCCTCTTACCAACCCACTACCCTTGAATTTGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACGACGATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTTAAAATTTCACCAGAAACGATATCGTTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTTGATAATGCGGTTACCATTTTCAATCAATGTTCTAAATCTATCGACTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCATTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCCGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGATATTTAGAATCTGCAAAGGTTATGGTTAGAAAAATGATAAAAGAAGGATCTGTGCCTGATATAGGGACTTTTAATTCTCTGATTGATGTTATATGCAACTCTGGAGAAGTTGATTTTTGCATTAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTGATTCCAGCAACTTCGAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGTTGTATTGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATTCTTAAAGGAATGTGTAAAAGGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCGGTGTACACAATGTTGATAACAATGTGTGGACGTGGTGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAGATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACCGATGGATTGAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

Protein sequence

MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYGPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI
Homology
[Close]
BLAST of Lsi06G008100 vs. Swiss-Prot
Match: PP391_ARATH (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 591.3 bits (1523), Expect = 8.0e-168
Identity = 283/397 (71.28%), Postives = 329/397 (82.87%), Query Frame = 1 

Query: 2   ERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTLA 61
           ER+LN L++  + SE VFRVLRA S S  +S RFFNWA + NPSY PT++E+EEL K+LA
Sbjct: 65  ERSLNSLRLP-VTSEFVFRVLRATSRSSNDSLRFFNWARS-NPSYTPTSMEYEELAKSLA 124

Query: 62  RTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTV 121
             KKY +MWK+L QMK  +L IS ET+ FII++YGK G VD AV +FN   K++ C QTV
Sbjct: 125 SHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTV 184

Query: 122 EVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEE 181
           +VYN+LL ALC+VKMFHGAYALIRRMIRKG+ PDK+TY  LV GWCSAGKM+EAQEFL+E
Sbjct: 185 DVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDE 244

Query: 182 MSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSGE 241
           MS++GFNPP RGRDLL+EGLLNAGYLESAK MV KM K G VPDI TFN LI+ I  SGE
Sbjct: 245 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 304

Query: 242 VDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYGP 301
           V+FCI +++  CKLGLC DI+TYK LIPA SK+G+IDEAFRLL+ C+EDGH PFPSLY P
Sbjct: 305 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 364

Query: 302 ILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFG 361
           I+KGMC+ G FDDAF FFSDMK K HPPNRPVYTMLITMCGRGG+FVDAANYL+EM E G
Sbjct: 365 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 424

Query: 362 LPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
           L PISRCFDMVTDGLKN GKHDLA +IEQLEV +RG+
Sbjct: 425 LVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQLRGV 459

[Close]
BLAST of Lsi06G008100 vs. Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.0e-37
Identity = 102/381 (26.77%), Postives = 184/381 (48.29%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           +E  LN+  +  L   L+ RVL  C ++G   +RFF WA    P Y  +   ++ +VK L
Sbjct: 100 LELALNESGVE-LRPGLIERVLNRCGDAGNLGYRFFVWAAKQ-PRYCHSIEVYKSMVKIL 159

Query: 61  ARTKKYTTMWKVLLQMKTQNLK-ISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQ 120
           ++ +++  +W ++ +M+ +N + I PE    ++Q +    +V  A+ + ++  K    P 
Sbjct: 160 SKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD 219

Query: 121 TVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFL 180
              V+  LL ALC+      A  L   M R     + + + +L+ GWC  GKM EA+  L
Sbjct: 220 EY-VFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVL 279

Query: 181 EEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNS 240
            +M++ GF P +     L+ G  NAG +  A  ++R M + G  P+   +  LI  +C  
Sbjct: 280 VQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKV 339

Query: 241 GEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLY 300
             ++  + +F E+ +     D+ TY  L+    K G+ID+ + +L   I+ G +P    Y
Sbjct: 340 DRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTY 399

Query: 301 GPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 360
             I+    K+  F++       M+   + P+  +Y ++I +  + G   +A     EM E
Sbjct: 400 MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE 459

Query: 361 FGLPPISRCFDMVTDGLKNCG 381
            GL P    F ++ +GL + G
Sbjct: 460 NGLSPGVDTFVIMINGLASQG 476

[Close]
BLAST of Lsi06G008100 vs. Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-36
Identity = 94/338 (27.81%), Postives = 164/338 (48.52%), Query Frame = 1 

Query: 43  NPSYQPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVD 102
           N   +P  + +  L++ L    +++   ++L  M  + +  +  T S +I  + K+G + 
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342

Query: 103 NAVTIFNQCSK-SIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGT 162
            A  ++++  K SID    +  Y++L+   C       A  +   MI K   P+  TY T
Sbjct: 343 EAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 402

Query: 163 LVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEG 222
           L+ G+C A ++ E  E   EMSQ+G        + L++GL  AG  + A+ + +KM+ +G
Sbjct: 403 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 462

Query: 223 SVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAF 282
             PDI T++ L+D +C  G+++  + +F  + K  + PDI TY I+I    K G++++ +
Sbjct: 463 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 522

Query: 283 RLLHCCIEDGHIPFPSLYGPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMC 342
            L       G  P   +Y  ++ G C++G  ++A   F +MK  G  PN   Y  LI   
Sbjct: 523 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 582

Query: 343 GRGGRFVDAANYLMEMAEFGL----PPISRCFDMVTDG 376
            R G    +A  + EM   G       IS   +M+ DG
Sbjct: 583 LRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618

[Close]
BLAST of Lsi06G008100 vs. Swiss-Prot
Match: PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.3e-36
Identity = 88/318 (27.67%), Postives = 149/318 (46.86%), Query Frame = 1 

Query: 47  QPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVT 106
           QP    +  L+    +  +     +VL +M++++      T + +I     +G +D A+ 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 107 IFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGW 166
           + NQ   S +C  TV  Y  L+ A         A  L+  M+ +G+ PD  TY T++ G 
Sbjct: 215 VLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 274

Query: 167 CSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDI 226
           C  G +  A E +  +  KG  P +   ++L+  LLN G  E  + ++ KM  E   P++
Sbjct: 275 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 334

Query: 227 GTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHC 286
            T++ LI  +C  G+++  +N+   + + GL PD  +Y  LI A  + GR+D A   L  
Sbjct: 335 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 394

Query: 287 CIEDGHIPFPSLYGPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGR 346
            I DG +P    Y  +L  +CK G+ D A   F  +   G  PN   Y  + +     G 
Sbjct: 395 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 454

Query: 347 FVDAANYLMEMAEFGLPP 365
            + A + ++EM   G+ P
Sbjct: 455 KIRALHMILEMMSNGIDP 471

[Close]
BLAST of Lsi06G008100 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.1e-35
Identity = 93/344 (27.03%), Postives = 164/344 (47.67%), Query Frame = 1 

Query: 48  PTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGL---VDNA 107
           P  + +  L+    + +K    +K+L  M  + L+ +  + + +I    ++G    V   
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297

Query: 108 VTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVT 167
           +T  N+   S+D       YN L+   C+   FH A  +   M+R G+TP   TY +L+ 
Sbjct: 298 LTEMNRRGYSLD----EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 357

Query: 168 GWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVP 227
             C AG M  A EFL++M  +G  P  R    LV+G    GY+  A  ++R+M   G  P
Sbjct: 358 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 417

Query: 228 DIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLL 287
            + T+N+LI+  C +G+++  I +  ++ + GL PD+ +Y  ++    +   +DEA R+ 
Sbjct: 418 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 477

Query: 288 HCCIEDGHIPFPSLYGPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRG 347
              +E G  P    Y  +++G C++ +  +A   + +M   G PP+   YT LI      
Sbjct: 478 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 537

Query: 348 GRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKI 389
           G    A     EM E G+ P    + ++ +GL    +   AK++
Sbjct: 538 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

[Close]
BLAST of Lsi06G008100 vs. TrEMBL
Match: A0A0A0M105_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695420 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 5.5e-232
Identity = 388/398 (97.49%), Postives = 393/398 (98.74%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           MERTLNKL+IS LNSELVFRVLRACSNSGTESFRFFNWAC+HNPSYQPTTLEFEELVKTL
Sbjct: 58  MERTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTL 117

Query: 61  ARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT 120
           ART+KYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT
Sbjct: 118 ARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT 177

Query: 121 VEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLE 180
           VEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKM+EAQEFLE
Sbjct: 178 VEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLE 237

Query: 181 EMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSG 240
           EMSQKGFNPPLRGRDLLVEGLLNAGYLESAK MVRKM KEGSVPDIGTFNSLIDVICNSG
Sbjct: 238 EMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSG 297

Query: 241 EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYG 300
           EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGH+PFPSLYG
Sbjct: 298 EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYG 357

Query: 301 PILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEF 360
           PILKGMCKRGQFDDAFCFF DMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 
Sbjct: 358 PILKGMCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEL 417

Query: 361 GLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
           GLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI
Sbjct: 418 GLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 455

[Close]
BLAST of Lsi06G008100 vs. TrEMBL
Match: W9RHW0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024459 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 2.3e-182
Identity = 301/399 (75.44%), Postives = 346/399 (86.72%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           MERTLNKL+I+ ++S+LVFRVLRAC   G ES RFFNWA +H PSY+PT++E EEL K L
Sbjct: 72  MERTLNKLRIAAVDSDLVFRVLRACHKFGPESLRFFNWARSHQPSYRPTSVELEELAKNL 131

Query: 61  ARTKKYTTMWKVLLQMKTQN-LKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQ 120
           ARTKKY +MWK+L QMKT N L IS ET+ FII+EYGKQGLVD A  +FN+  K  +C Q
Sbjct: 132 ARTKKYESMWKILQQMKTNNNLIISSETLCFIIEEYGKQGLVDQAAEVFNRVPKIFNCSQ 191

Query: 121 TVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFL 180
           TVEVYN+LLFALCEVK+FHGAYAL+RRMIRK V PDK+TY  LV  WCSAGKMREAQ FL
Sbjct: 192 TVEVYNSLLFALCEVKLFHGAYALVRRMIRKEVVPDKRTYSILVNAWCSAGKMREAQNFL 251

Query: 181 EEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNS 240
            EMS+KGFNPP+RGRDLL+EGLLNAGY+ESAK MVRKM+KEG +PD+ TFNSL++VIC S
Sbjct: 252 SEMSKKGFNPPVRGRDLLIEGLLNAGYIESAKEMVRKMVKEGFLPDVSTFNSLVEVICKS 311

Query: 241 GEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLY 300
            EV+FCI+++H+VC LGLCPDINTYK+LIPA SK G+IDEAFRLLH  IEDGH PFPSLY
Sbjct: 312 EEVEFCIDLYHQVCGLGLCPDINTYKVLIPAVSKAGQIDEAFRLLHSSIEDGHKPFPSLY 371

Query: 301 GPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 360
            PI+KGMC++GQFDDA CFF +MK KGHPPNRPVYTMLITMCGRGGRFVDAANYL+EM E
Sbjct: 372 APIIKGMCRKGQFDDALCFFGEMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTE 431

Query: 361 FGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
            GL PISRCFD+VTDGLKNCGKHDLA++IEQLEVS RG+
Sbjct: 432 IGLTPISRCFDLVTDGLKNCGKHDLARRIEQLEVSARGM 470

[Close]
BLAST of Lsi06G008100 vs. TrEMBL
Match: A0A061F291_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_026106 PE=4 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 2.1e-178
Identity = 304/397 (76.57%), Postives = 344/397 (86.65%), Query Frame = 1 

Query: 2   ERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTLA 61
           ERTLN++ IS +NSELVFRVLR+CSNS TES RFF+WA  H   Y PT++EFEELVK L 
Sbjct: 64  ERTLNRMNIS-VNSELVFRVLRSCSNSPTESLRFFSWARAH---YVPTSVEFEELVKILI 123

Query: 62  RTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTV 121
           R +KY +MWK + QM+ QNL +S +T+SFII+EYGK GLVD AV +FN+ S S+ C QTV
Sbjct: 124 RHRKYESMWKTIQQMQKQNLSLSCDTLSFIIEEYGKNGLVDQAVEVFNK-STSLGCKQTV 183

Query: 122 EVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEE 181
            VYN+LLFALCEVKMFHGAYALIRRMIRKG  PDK+TY  LV GWCS GKMREAQEFLEE
Sbjct: 184 SVYNSLLFALCEVKMFHGAYALIRRMIRKGEVPDKRTYAILVNGWCSGGKMREAQEFLEE 243

Query: 182 MSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSGE 241
           MS+ GFNPP+RGRDLLVEGLLNAGYLESAK MVR+M KEG VPDIGTFNSL++ IC+SGE
Sbjct: 244 MSKMGFNPPVRGRDLLVEGLLNAGYLESAKEMVRRMTKEGFVPDIGTFNSLVETICSSGE 303

Query: 242 VDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYGP 301
           VDFCIN++H VCKLGLCPDINTYKILIPA SKVGRIDEAFRLL+  +EDG+ PFPSLY P
Sbjct: 304 VDFCINMYHSVCKLGLCPDINTYKILIPAASKVGRIDEAFRLLNNSVEDGYRPFPSLYAP 363

Query: 302 ILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFG 361
           I+K MC++GQFDDAF FF +MK KGH PNRPVYTMLITMCGRGGRFV+AANYL+EM E G
Sbjct: 364 IIKAMCRKGQFDDAFSFFGEMKVKGHSPNRPVYTMLITMCGRGGRFVEAANYLVEMTELG 423

Query: 362 LPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
           L PISRCFDMV DGLKNCGKHDLAK+IEQLEVS+RG+
Sbjct: 424 LAPISRCFDMVIDGLKNCGKHDLAKRIEQLEVSLRGV 455

[Close]
BLAST of Lsi06G008100 vs. TrEMBL
Match: M5WME7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025361mg PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 1.3e-177
Identity = 297/398 (74.62%), Postives = 346/398 (86.93%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           MERTLNKL+I+ ++SELV+RVLRACS +GTES RFFNWA TH+P+Y PTTLE EELVKTL
Sbjct: 63  MERTLNKLRIT-VDSELVYRVLRACSAAGTESLRFFNWARTHHPTYHPTTLELEELVKTL 122

Query: 61  ARTKKYTTMWKVLLQMKTQN-LKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQ 120
           ARTKKY +MWK+L  M+T + L +S E++ F+I+EYG  GLVD AV +FN+  K+ +C Q
Sbjct: 123 ARTKKYESMWKLLQSMQTHHGLTLSQESLCFVIEEYGNHGLVDQAVELFNRAPKTFNCLQ 182

Query: 121 TVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFL 180
           TVEVYNALLF+LC+ K+FH AYAL+RRMIRKG+ PDK+TY  LV  WCS GKMREAQ FL
Sbjct: 183 TVEVYNALLFSLCQAKLFHAAYALVRRMIRKGLVPDKRTYSILVNAWCSNGKMREAQLFL 242

Query: 181 EEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNS 240
           EEMS KGFNPP+RGRDLLVEGLLNAGY+E+AK MVRKM+KEG VPD+ TFNSL++ IC  
Sbjct: 243 EEMSSKGFNPPVRGRDLLVEGLLNAGYIEAAKEMVRKMVKEGFVPDVSTFNSLMEAICKC 302

Query: 241 GEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLY 300
           GEV+FCI+++ E   LGLCPDINTYK+LIPA SKVGRID+AFRLLH  IEDGH PFPSLY
Sbjct: 303 GEVEFCIDLYWEANGLGLCPDINTYKVLIPAVSKVGRIDDAFRLLHNSIEDGHRPFPSLY 362

Query: 301 GPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 360
            PI+KGMC+RGQFDDAFCFFS+MK KGHPPNRPVYTMLITM GRGGRFV+AANYL+EM E
Sbjct: 363 APIIKGMCRRGQFDDAFCFFSEMKVKGHPPNRPVYTMLITMSGRGGRFVEAANYLVEMTE 422

Query: 361 FGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRG 398
            GL PISRCFD+VTDGLKNCGKHD+AK+IEQLEVS+RG
Sbjct: 423 MGLMPISRCFDLVTDGLKNCGKHDMAKRIEQLEVSLRG 459

[Close]
BLAST of Lsi06G008100 vs. TrEMBL
Match: D7TDU0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00770 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 2.4e-174
Identity = 289/398 (72.61%), Postives = 344/398 (86.43%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           +ERTLNKL IS + S+LV+RVLR+C NSGTES RFFNWA +H  SYQPTTLE+EEL+KTL
Sbjct: 63  LERTLNKLPIS-VTSDLVYRVLRSCPNSGTESLRFFNWARSH-LSYQPTTLEYEELLKTL 122

Query: 61  ARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT 120
           ARTK++  MWK+  QM+T    +SP  +S II+E+GK GLVD AV +FN+   +++CPQT
Sbjct: 123 ARTKQFQPMWKIAHQMQT----LSPTVVSSIIEEFGKHGLVDQAVEVFNKAKSALNCPQT 182

Query: 121 VEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLE 180
           +EVYN+LLFALCEVK FHGAYALIRRMIRKGVTP+K+TY  LV GWC+AGKM+EAQ+FLE
Sbjct: 183 IEVYNSLLFALCEVKYFHGAYALIRRMIRKGVTPNKQTYSVLVNGWCAAGKMKEAQDFLE 242

Query: 181 EMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSG 240
           EMS+KGFNPP+RGRDLLV+GLLNAGYLE+AK MVRKM KEG  PD+ T NS+++ IC +G
Sbjct: 243 EMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAG 302

Query: 241 EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYG 300
           E +FCI+I+++VC+LG+ P++ TYKI+IPA  K GRIDEAFR+LH  IEDGH PFPSLY 
Sbjct: 303 EAEFCIDIYNDVCRLGVSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYA 362

Query: 301 PILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEF 360
           PI+K +C+ GQFDDAFCFFSDMK KGHPPNRPVYTMLITMCGRGGRFVDAANYL+EM E 
Sbjct: 363 PIIKALCRNGQFDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTEL 422

Query: 361 GLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
            L PISRCFDMVTDGLKNCGKHDLA+KIEQLEVS+RG+
Sbjct: 423 NLTPISRCFDMVTDGLKNCGKHDLARKIEQLEVSLRGV 454

[Close]
BLAST of Lsi06G008100 vs. TAIR10
Match: AT5G18390.1 (AT5G18390.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 591.3 bits (1523), Expect = 4.5e-169
Identity = 283/397 (71.28%), Postives = 329/397 (82.87%), Query Frame = 1 

Query: 2   ERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTLA 61
           ER+LN L++  + SE VFRVLRA S S  +S RFFNWA + NPSY PT++E+EEL K+LA
Sbjct: 65  ERSLNSLRLP-VTSEFVFRVLRATSRSSNDSLRFFNWARS-NPSYTPTSMEYEELAKSLA 124

Query: 62  RTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTV 121
             KKY +MWK+L QMK  +L IS ET+ FII++YGK G VD AV +FN   K++ C QTV
Sbjct: 125 SHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTV 184

Query: 122 EVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEE 181
           +VYN+LL ALC+VKMFHGAYALIRRMIRKG+ PDK+TY  LV GWCSAGKM+EAQEFL+E
Sbjct: 185 DVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDE 244

Query: 182 MSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSGE 241
           MS++GFNPP RGRDLL+EGLLNAGYLESAK MV KM K G VPDI TFN LI+ I  SGE
Sbjct: 245 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 304

Query: 242 VDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYGP 301
           V+FCI +++  CKLGLC DI+TYK LIPA SK+G+IDEAFRLL+ C+EDGH PFPSLY P
Sbjct: 305 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 364

Query: 302 ILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFG 361
           I+KGMC+ G FDDAF FFSDMK K HPPNRPVYTMLITMCGRGG+FVDAANYL+EM E G
Sbjct: 365 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 424

Query: 362 LPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
           L PISRCFDMVTDGLKN GKHDLA +IEQLEV +RG+
Sbjct: 425 LVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQLRGV 459

[Close]
BLAST of Lsi06G008100 vs. TAIR10
Match: AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-38
Identity = 102/381 (26.77%), Postives = 184/381 (48.29%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           +E  LN+  +  L   L+ RVL  C ++G   +RFF WA    P Y  +   ++ +VK L
Sbjct: 100 LELALNESGVE-LRPGLIERVLNRCGDAGNLGYRFFVWAAKQ-PRYCHSIEVYKSMVKIL 159

Query: 61  ARTKKYTTMWKVLLQMKTQNLK-ISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQ 120
           ++ +++  +W ++ +M+ +N + I PE    ++Q +    +V  A+ + ++  K    P 
Sbjct: 160 SKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD 219

Query: 121 TVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFL 180
              V+  LL ALC+      A  L   M R     + + + +L+ GWC  GKM EA+  L
Sbjct: 220 EY-VFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVL 279

Query: 181 EEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNS 240
            +M++ GF P +     L+ G  NAG +  A  ++R M + G  P+   +  LI  +C  
Sbjct: 280 VQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKV 339

Query: 241 GEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLY 300
             ++  + +F E+ +     D+ TY  L+    K G+ID+ + +L   I+ G +P    Y
Sbjct: 340 DRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTY 399

Query: 301 GPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 360
             I+    K+  F++       M+   + P+  +Y ++I +  + G   +A     EM E
Sbjct: 400 MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE 459

Query: 361 FGLPPISRCFDMVTDGLKNCG 381
            GL P    F ++ +GL + G
Sbjct: 460 NGLSPGVDTFVIMINGLASQG 476

[Close]
BLAST of Lsi06G008100 vs. TAIR10
Match: AT1G62930.1 (AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 94/338 (27.81%), Postives = 164/338 (48.52%), Query Frame = 1 

Query: 43  NPSYQPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVD 102
           N   +P  + +  L++ L    +++   ++L  M  + +  +  T S +I  + K+G + 
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342

Query: 103 NAVTIFNQCSK-SIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGT 162
            A  ++++  K SID    +  Y++L+   C       A  +   MI K   P+  TY T
Sbjct: 343 EAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 402

Query: 163 LVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEG 222
           L+ G+C A ++ E  E   EMSQ+G        + L++GL  AG  + A+ + +KM+ +G
Sbjct: 403 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 462

Query: 223 SVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAF 282
             PDI T++ L+D +C  G+++  + +F  + K  + PDI TY I+I    K G++++ +
Sbjct: 463 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 522

Query: 283 RLLHCCIEDGHIPFPSLYGPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMC 342
            L       G  P   +Y  ++ G C++G  ++A   F +MK  G  PN   Y  LI   
Sbjct: 523 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 582

Query: 343 GRGGRFVDAANYLMEMAEFGL----PPISRCFDMVTDG 376
            R G    +A  + EM   G       IS   +M+ DG
Sbjct: 583 LRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618

[Close]
BLAST of Lsi06G008100 vs. TAIR10
Match: AT3G04760.1 (AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 4.1e-37
Identity = 88/318 (27.67%), Postives = 149/318 (46.86%), Query Frame = 1 

Query: 47  QPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVT 106
           QP    +  L+    +  +     +VL +M++++      T + +I     +G +D A+ 
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214

Query: 107 IFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGW 166
           + NQ   S +C  TV  Y  L+ A         A  L+  M+ +G+ PD  TY T++ G 
Sbjct: 215 VLNQLL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 274

Query: 167 CSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDI 226
           C  G +  A E +  +  KG  P +   ++L+  LLN G  E  + ++ KM  E   P++
Sbjct: 275 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 334

Query: 227 GTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHC 286
            T++ LI  +C  G+++  +N+   + + GL PD  +Y  LI A  + GR+D A   L  
Sbjct: 335 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 394

Query: 287 CIEDGHIPFPSLYGPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGR 346
            I DG +P    Y  +L  +CK G+ D A   F  +   G  PN   Y  + +     G 
Sbjct: 395 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 454

Query: 347 FVDAANYLMEMAEFGLPP 365
            + A + ++EM   G+ P
Sbjct: 455 KIRALHMILEMMSNGIDP 471

[Close]
BLAST of Lsi06G008100 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-36
Identity = 93/344 (27.03%), Postives = 164/344 (47.67%), Query Frame = 1 

Query: 48  PTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGL---VDNA 107
           P  + +  L+    + +K    +K+L  M  + L+ +  + + +I    ++G    V   
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297

Query: 108 VTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVT 167
           +T  N+   S+D       YN L+   C+   FH A  +   M+R G+TP   TY +L+ 
Sbjct: 298 LTEMNRRGYSLD----EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 357

Query: 168 GWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVP 227
             C AG M  A EFL++M  +G  P  R    LV+G    GY+  A  ++R+M   G  P
Sbjct: 358 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 417

Query: 228 DIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLL 287
            + T+N+LI+  C +G+++  I +  ++ + GL PD+ +Y  ++    +   +DEA R+ 
Sbjct: 418 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 477

Query: 288 HCCIEDGHIPFPSLYGPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRG 347
              +E G  P    Y  +++G C++ +  +A   + +M   G PP+   YT LI      
Sbjct: 478 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 537

Query: 348 GRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKI 389
           G    A     EM E G+ P    + ++ +GL    +   AK++
Sbjct: 538 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

[Close]
BLAST of Lsi06G008100 vs. NCBI nr
Match: gi|449449535|ref|XP_004142520.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis sativus])

HSP 1 Score: 811.2 bits (2094), Expect = 7.9e-232
Identity = 388/398 (97.49%), Postives = 393/398 (98.74%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           MERTLNKL+IS LNSELVFRVLRACSNSGTESFRFFNWAC+HNPSYQPTTLEFEELVKTL
Sbjct: 58  MERTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTL 117

Query: 61  ARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT 120
           ART+KYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT
Sbjct: 118 ARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT 177

Query: 121 VEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLE 180
           VEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKM+EAQEFLE
Sbjct: 178 VEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLE 237

Query: 181 EMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSG 240
           EMSQKGFNPPLRGRDLLVEGLLNAGYLESAK MVRKM KEGSVPDIGTFNSLIDVICNSG
Sbjct: 238 EMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSG 297

Query: 241 EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYG 300
           EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGH+PFPSLYG
Sbjct: 298 EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYG 357

Query: 301 PILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEF 360
           PILKGMCKRGQFDDAFCFF DMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 
Sbjct: 358 PILKGMCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEL 417

Query: 361 GLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
           GLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI
Sbjct: 418 GLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 455

[Close]
BLAST of Lsi06G008100 vs. NCBI nr
Match: gi|659125518|ref|XP_008462724.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis melo])

HSP 1 Score: 800.4 bits (2066), Expect = 1.4e-228
Identity = 381/398 (95.73%), Postives = 391/398 (98.24%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           MERTLNKL+ISYLNSELVFRVLRACSN GTESFRFFNWAC+HNPSYQPTTLE EELVKTL
Sbjct: 58  MERTLNKLRISYLNSELVFRVLRACSNCGTESFRFFNWACSHNPSYQPTTLELEELVKTL 117

Query: 61  ARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT 120
           ART+KYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT
Sbjct: 118 ARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQT 177

Query: 121 VEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLE 180
           VEVYNALLFALCEVKMFHGAYALIRRMI+KGVTPDKKTYGTLVTGWCSAGKM+EAQEFLE
Sbjct: 178 VEVYNALLFALCEVKMFHGAYALIRRMIKKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLE 237

Query: 181 EMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSG 240
           EMSQKGFNPPLRGRDLLVEGLLNAGYLESAK MVRKM KEG VPDIGTFNSLIDVICNSG
Sbjct: 238 EMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGCVPDIGTFNSLIDVICNSG 297

Query: 241 EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYG 300
           EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLL+CCIEDGH+PFPSLYG
Sbjct: 298 EVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLNCCIEDGHVPFPSLYG 357

Query: 301 PILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEF 360
           PI+KGMCKRGQFDDAFCFF DMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 
Sbjct: 358 PIIKGMCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEL 417

Query: 361 GLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
           GLPPISRCFDMVTDGLK+CGKHDLAKKIE+LEVSIRGI
Sbjct: 418 GLPPISRCFDMVTDGLKSCGKHDLAKKIEKLEVSIRGI 455

[Close]
BLAST of Lsi06G008100 vs. NCBI nr
Match: gi|1009129954|ref|XP_015882041.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 649.4 bits (1674), Expect = 4.0e-183
Identity = 307/399 (76.94%), Postives = 348/399 (87.22%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           MERTLNK++IS +NSELV+RVLR+CS S TE+ RFFNWA TH+PSY PTT+E EELV+TL
Sbjct: 64  MERTLNKMRIS-VNSELVYRVLRSCSTSATEALRFFNWAQTHHPSYHPTTVECEELVRTL 123

Query: 61  ARTKKYTTMWKVLLQMKTQ-NLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQ 120
           ARTKKY +MWK+L QM T  NL +SP+T+ FI++EYG+ GLVD AV IFNQ  K  +C Q
Sbjct: 124 ARTKKYESMWKILNQMHTHHNLSVSPDTLCFIVEEYGRHGLVDQAVEIFNQAPKIFNCKQ 183

Query: 121 TVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFL 180
           TV +YN+LLFALCEVK+FHGAYALIRRMIRKGV PDK+TY  LV  WCSAGK REAQ+FL
Sbjct: 184 TVNLYNSLLFALCEVKLFHGAYALIRRMIRKGVVPDKRTYSILVNAWCSAGKFREAQQFL 243

Query: 181 EEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNS 240
           EEMS+KGFNPP+RGRDLLVEGLLNAGY+ESAK MV+KMIKEG VPD+ TFNSL++ I   
Sbjct: 244 EEMSKKGFNPPVRGRDLLVEGLLNAGYVESAKEMVKKMIKEGFVPDVSTFNSLLEAISKH 303

Query: 241 GEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLY 300
           GEV+FCI+++ EVC LGL PDINTYK+LIP  SKVGRIDEAFRLLH  IEDGH PFPSLY
Sbjct: 304 GEVEFCIDLYREVCILGLVPDINTYKVLIPGVSKVGRIDEAFRLLHDSIEDGHKPFPSLY 363

Query: 301 GPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 360
            PI+KGMCK GQFDDA CFFS+MK KGHPPNRPVYTMLITMCGRGGRFV+AANYLMEM E
Sbjct: 364 APIIKGMCKNGQFDDALCFFSEMKVKGHPPNRPVYTMLITMCGRGGRFVEAANYLMEMTE 423

Query: 361 FGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
            GL PISRCFD+VTDGLKNCGKHDLAKKIEQLEVS+RG+
Sbjct: 424 LGLTPISRCFDLVTDGLKNCGKHDLAKKIEQLEVSLRGV 461

[Close]
BLAST of Lsi06G008100 vs. NCBI nr
Match: gi|703120790|ref|XP_010102179.1| (hypothetical protein L484_024459 [Morus notabilis])

HSP 1 Score: 646.4 bits (1666), Expect = 3.4e-182
Identity = 301/399 (75.44%), Postives = 346/399 (86.72%), Query Frame = 1 

Query: 1   MERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTL 60
           MERTLNKL+I+ ++S+LVFRVLRAC   G ES RFFNWA +H PSY+PT++E EEL K L
Sbjct: 72  MERTLNKLRIAAVDSDLVFRVLRACHKFGPESLRFFNWARSHQPSYRPTSVELEELAKNL 131

Query: 61  ARTKKYTTMWKVLLQMKTQN-LKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQ 120
           ARTKKY +MWK+L QMKT N L IS ET+ FII+EYGKQGLVD A  +FN+  K  +C Q
Sbjct: 132 ARTKKYESMWKILQQMKTNNNLIISSETLCFIIEEYGKQGLVDQAAEVFNRVPKIFNCSQ 191

Query: 121 TVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFL 180
           TVEVYN+LLFALCEVK+FHGAYAL+RRMIRK V PDK+TY  LV  WCSAGKMREAQ FL
Sbjct: 192 TVEVYNSLLFALCEVKLFHGAYALVRRMIRKEVVPDKRTYSILVNAWCSAGKMREAQNFL 251

Query: 181 EEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNS 240
            EMS+KGFNPP+RGRDLL+EGLLNAGY+ESAK MVRKM+KEG +PD+ TFNSL++VIC S
Sbjct: 252 SEMSKKGFNPPVRGRDLLIEGLLNAGYIESAKEMVRKMVKEGFLPDVSTFNSLVEVICKS 311

Query: 241 GEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLY 300
            EV+FCI+++H+VC LGLCPDINTYK+LIPA SK G+IDEAFRLLH  IEDGH PFPSLY
Sbjct: 312 EEVEFCIDLYHQVCGLGLCPDINTYKVLIPAVSKAGQIDEAFRLLHSSIEDGHKPFPSLY 371

Query: 301 GPILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAE 360
            PI+KGMC++GQFDDA CFF +MK KGHPPNRPVYTMLITMCGRGGRFVDAANYL+EM E
Sbjct: 372 APIIKGMCRKGQFDDALCFFGEMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTE 431

Query: 361 FGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
            GL PISRCFD+VTDGLKNCGKHDLA++IEQLEVS RG+
Sbjct: 432 IGLTPISRCFDLVTDGLKNCGKHDLARRIEQLEVSARGM 470

[Close]
BLAST of Lsi06G008100 vs. NCBI nr
Match: gi|590641647|ref|XP_007030290.1| (Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao])

HSP 1 Score: 633.3 bits (1632), Expect = 2.9e-178
Identity = 304/397 (76.57%), Postives = 344/397 (86.65%), Query Frame = 1 

Query: 2   ERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYQPTTLEFEELVKTLA 61
           ERTLN++ IS +NSELVFRVLR+CSNS TES RFF+WA  H   Y PT++EFEELVK L 
Sbjct: 64  ERTLNRMNIS-VNSELVFRVLRSCSNSPTESLRFFSWARAH---YVPTSVEFEELVKILI 123

Query: 62  RTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTV 121
           R +KY +MWK + QM+ QNL +S +T+SFII+EYGK GLVD AV +FN+ S S+ C QTV
Sbjct: 124 RHRKYESMWKTIQQMQKQNLSLSCDTLSFIIEEYGKNGLVDQAVEVFNK-STSLGCKQTV 183

Query: 122 EVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEE 181
            VYN+LLFALCEVKMFHGAYALIRRMIRKG  PDK+TY  LV GWCS GKMREAQEFLEE
Sbjct: 184 SVYNSLLFALCEVKMFHGAYALIRRMIRKGEVPDKRTYAILVNGWCSGGKMREAQEFLEE 243

Query: 182 MSQKGFNPPLRGRDLLVEGLLNAGYLESAKVMVRKMIKEGSVPDIGTFNSLIDVICNSGE 241
           MS+ GFNPP+RGRDLLVEGLLNAGYLESAK MVR+M KEG VPDIGTFNSL++ IC+SGE
Sbjct: 244 MSKMGFNPPVRGRDLLVEGLLNAGYLESAKEMVRRMTKEGFVPDIGTFNSLVETICSSGE 303

Query: 242 VDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHIPFPSLYGP 301
           VDFCIN++H VCKLGLCPDINTYKILIPA SKVGRIDEAFRLL+  +EDG+ PFPSLY P
Sbjct: 304 VDFCINMYHSVCKLGLCPDINTYKILIPAASKVGRIDEAFRLLNNSVEDGYRPFPSLYAP 363

Query: 302 ILKGMCKRGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFG 361
           I+K MC++GQFDDAF FF +MK KGH PNRPVYTMLITMCGRGGRFV+AANYL+EM E G
Sbjct: 364 IIKAMCRKGQFDDAFSFFGEMKVKGHSPNRPVYTMLITMCGRGGRFVEAANYLVEMTELG 423

Query: 362 LPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI 399
           L PISRCFDMV DGLKNCGKHDLAK+IEQLEVS+RG+
Sbjct: 424 LAPISRCFDMVIDGLKNCGKHDLAKRIEQLEVSLRGV 455

The following BLAST results are available for this feature:
BLAST of Lsi06G008100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP391_ARATH8.0e-16871.28Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidop... [more]
PP447_ARATH3.0e-3726.77Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
PPR96_ARATH1.9e-3627.81Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
PP213_ARATH7.3e-3627.67Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
PP407_ARATH2.1e-3527.03Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
BLAST of Lsi06G008100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M105_CUCSA5.5e-23297.49Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695420 PE=4 SV=1[more]
W9RHW0_9ROSA2.3e-18275.44Uncharacterized protein OS=Morus notabilis GN=L484_024459 PE=4 SV=1[more]
A0A061F291_THECC2.1e-17876.57Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_026... [more]
M5WME7_PRUPE1.3e-17774.62Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025361mg PE=4 SV=1[more]
D7TDU0_VITVI2.4e-17472.61Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0043g00770 PE=4 SV=... [more]
BLAST of Lsi06G008100 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18390.14.5e-16971.28 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G65820.11.7e-3826.77 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62930.11.1e-3727.81 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G04760.14.1e-3727.67 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G39710.11.2e-3627.03 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Lsi06G008100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449535|ref|XP_004142520.1|7.9e-23297.49PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial ... [more]
gi|659125518|ref|XP_008462724.1|1.4e-22895.73PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial ... [more]
gi|1009129954|ref|XP_015882041.1|4.0e-18376.94PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial ... [more]
gi|703120790|ref|XP_010102179.1|3.4e-18275.44hypothetical protein L484_024459 [Morus notabilis][more]
gi|590641647|ref|XP_007030290.1|2.9e-17876.57Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G008100.1Lsi06G008100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 121..168
score: 3.3E-10coord: 224..270
score: 3.8E-8coord: 302..341
score: 8.0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 158..189
score: 1.0E-4coord: 333..364
score: 2.9E-4coord: 299..330
score: 2.1E-7coord: 228..261
score: 5.9E-5coord: 123..155
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 49..83
score: 6.303coord: 295..329
score: 10.589coord: 190..224
score: 7.07coord: 330..364
score: 10.073coord: 120..154
score: 10.841coord: 155..189
score: 12.693coord: 260..294
score: 9.547coord: 84..118
score: 6.588coord: 225..259
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 93..358
score: 4.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 14..398
score: 2.6E
NoneNo IPR availablePANTHERPTHR24015:SF579SUBFAMILY NOT NAMEDcoord: 14..398
score: 2.6E