CsaV3_1G045690 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G045690
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionpentatricopeptide repeat-containing protein At5g18390, mitochondrial
Locationchr1 : 31536085 .. 31538834 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATCTTAATCGTCCCGAGATATACTTGATTGAGAGAATAAACAGGTGTGCCGTGGAAGTGACAAGGATTTGAACGTATTTTTTTTTCTTGGATCTCTATATGAGAGGATCCCTTTTGCTTAATGCATGCCCTAATCGTGAAGTGGACTAAAACTCCCTCTAAAGTGTGACGCGGAACACGCCCTTAATCCAATCGGGCTGACATCGTGGGAGTTCTACGCTTTAAGCCATCCACAACAGTACAACACCGTGACTATCGAGCCCAATACTACCAATTCGTAGGCTTCAGTTCTTCCTTTTCTGGTTTGATGACGATCATACAAAACTTCTTGTGATTTCGTTCCCAAATGCTCCATTTCAAAAATTTCGCAACAGGGCTAATACGGTTCCGGTACATTTTTCTCAACCGCCATTTCAGTAACTCAAATTCTTTGGTGAATGGCTCCACCGCGCCTTCGAAAGACGACTATTTCGCTGCAATCCACCATATCTCCCACATTGTCCGCCGAGACTTCTACATGGAGCGCACTCTCAACAAGCTCCGAATCTCCAACCTCAATTCCGAGCTCGTTTTCAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACCGAGTCCTTCCGTTTCTTCAACTGGGCTTGCTCTCACAACCCCTCTTACCAACCCACTACCCTTGAATTTGAAGAGCTCGTCAAAACCCTAGCTCGGACCAGAAAGTATACCACGATGTGGAAAGTTCTTCTTCAGATGAAGACTCAGAATCTCAAAATTTCACCGGAAACGATATCGTTCATAATTCAAGAGTATGGTAAGCAGGGCCTTGTAGATAATGCGGTTACCATATTCAATCAATGTTCCAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCGTTACTTTTTGCGCTTTGTGAGGTTAAAATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGCGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAAGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTTGAAGGATTGCTTAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACTAAAGAAGGATCTGTGCCTGATATAGGAACTTTTAATTCTCTGATTGATGTTATATGCAACTCTGGAGAAGTTGATTTTTGCATTAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTGATTCCAGCAACTTCGAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATTGAGGATGGACATGTACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAAGGGGTCAGTTCGATGATGCATTTTGCTTTTTTGGTGATATGAAACATAAGGGGCATCCACCAAATCGACCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAACTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTGAAGAACTGTGGAAAACATGATTTAGCAAAGAAGATTGAACAGCTTGAAGTTTCTATTCGAGGCATTTGATCCTATAGTAAAGTAATAAGCAAGTACTTATTCTGCTTGAAGGATGTGGTTGAAATGGATATGAAAAACGAAAAACTACAGAAGTCGGAAAAAGGACAAACAAAGAAGCACTTCTCTTAGGAAATTCCTTCTAATCACTCTTACACATGTGGAGAGAGTTCAGAGAAAGGAAGTCTCAAGTTGAGGTTATCATCCAGCGAACGATCAACATTTTCAGATGCACTGTATGGATTGTGACTGAGGCTACTGCTATCTAGGTTTCATATACAGCTTCTAATGCTTAATTGCTAATATTATCTAACTGTTTAGTGCATGATTTGCTTGGTCATTTAATCCTGTCTCATGAAAACGTATATTTCCAATGTGCTATGGCCATTAAAATATTTGCTTTGGGTGCTGCCAACTATTGAGCTATGAACAGTATCCATTGAGTTGATAAGACCACACGGTCGATTCTTACAGTTTTCCGCTTTGTTTTTCTAAAAGTTAGAGTTACTATTTGGCTTGAGAAAGCTGAGAGGTGATTTCTACAGGGAAGTGCTGAATTCTTTGAGTTCAAAGGTGAATCGTTTTCTTGCTTCAAGGTGGCGTTCTCTGTCAAAGGATTGCAGTAGCCTTTTCTTCAAATCTATATCAATTGGATTCTTGTAATGTCTTCTGATTCCGGAAGGAAAGACGACTACTTCCAAGTCGATTTGAATTGGGGAGAGATTGTGCTCTTATAAAAGGGGGTTAACTGTAGACTCTCCTTAGCTTTCCATATTCTCATGTATTTCAATCCTGCGATCATTCAATCTTCAATTATATGCTTGTTTTTTCTTTGGTGAGTGATGTAGATATGGTATATGTTGGATATTATATTAAACCGGATGTCCTGGATTTAAGCTCTTGTTGTCTCTCAATTTAATAATGATTTTCACTTGTTTGGTCTTTTTGATATTTCAAACCCACAGGTGAGCGAAGTGAGGGGGAGTGTTGGATATTATATTAAATTTATCATCACCTATAAGCTTAAGCATTTTGATGGATTGGCGA

mRNA sequence

ATGCTCCATTTCAAAAATTTCGCAACAGGGCTAATACGGTTCCGGTACATTTTTCTCAACCGCCATTTCAGTAACTCAAATTCTTTGGTGAATGGCTCCACCGCGCCTTCGAAAGACGACTATTTCGCTGCAATCCACCATATCTCCCACATTGTCCGCCGAGACTTCTACATGGAGCGCACTCTCAACAAGCTCCGAATCTCCAACCTCAATTCCGAGCTCGTTTTCAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACCGAGTCCTTCCGTTTCTTCAACTGGGCTTGCTCTCACAACCCCTCTTACCAACCCACTACCCTTGAATTTGAAGAGCTCGTCAAAACCCTAGCTCGGACCAGAAAGTATACCACGATGTGGAAAGTTCTTCTTCAGATGAAGACTCAGAATCTCAAAATTTCACCGGAAACGATATCGTTCATAATTCAAGAGTATGGTAAGCAGGGCCTTGTAGATAATGCGGTTACCATATTCAATCAATGTTCCAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCGTTACTTTTTGCGCTTTGTGAGGTTAAAATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGCGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAAGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTTGAAGGATTGCTTAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACTAAAGAAGGATCTGTGCCTGATATAGGAACTTTTAATTCTCTGATTGATGTTATATGCAACTCTGGAGAAGTTGATTTTTGCATTAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTGATTCCAGCAACTTCGAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATTGAGGATGGACATGTACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAAGGGGTCAGTTCGATGATGCATTTTGCTTTTTTGGTGATATGAAACATAAGGGGCATCCACCAAATCGACCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAACTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTGAAGAACTGTGGAAAACATGATTTAGCAAAGAAGATTGAACAGCTTGAAGTTTCTATTCGAGGCATTTGA

Coding sequence (CDS)

ATGCTCCATTTCAAAAATTTCGCAACAGGGCTAATACGGTTCCGGTACATTTTTCTCAACCGCCATTTCAGTAACTCAAATTCTTTGGTGAATGGCTCCACCGCGCCTTCGAAAGACGACTATTTCGCTGCAATCCACCATATCTCCCACATTGTCCGCCGAGACTTCTACATGGAGCGCACTCTCAACAAGCTCCGAATCTCCAACCTCAATTCCGAGCTCGTTTTCAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACCGAGTCCTTCCGTTTCTTCAACTGGGCTTGCTCTCACAACCCCTCTTACCAACCCACTACCCTTGAATTTGAAGAGCTCGTCAAAACCCTAGCTCGGACCAGAAAGTATACCACGATGTGGAAAGTTCTTCTTCAGATGAAGACTCAGAATCTCAAAATTTCACCGGAAACGATATCGTTCATAATTCAAGAGTATGGTAAGCAGGGCCTTGTAGATAATGCGGTTACCATATTCAATCAATGTTCCAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCGTTACTTTTTGCGCTTTGTGAGGTTAAAATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGCGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAAGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTTGAAGGATTGCTTAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACTAAAGAAGGATCTGTGCCTGATATAGGAACTTTTAATTCTCTGATTGATGTTATATGCAACTCTGGAGAAGTTGATTTTTGCATTAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTGATTCCAGCAACTTCGAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATTGAGGATGGACATGTACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAAGGGGTCAGTTCGATGATGCATTTTGCTTTTTTGGTGATATGAAACATAAGGGGCATCCACCAAATCGACCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAACTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTGAAGAACTGTGGAAAACATGATTTAGCAAAGAAGATTGAACAGCTTGAAGTTTCTATTCGAGGCATTTGA

Protein sequence

MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHVPFPSLYGPILKGMCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAELGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI
Homology
[Close]
BLAST of CsaV3_1G045690 vs. NCBI nr
Match: XP_004142520.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis sativus] >KGN66807.1 hypothetical protein Csa_1G695420 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 5.0e-117
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMER 60
           MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMER
Sbjct: 1   MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMER 60

Query: 61  TLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLART 120
           TLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLART
Sbjct: 61  TLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLART 120

Query: 121 RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV 180
           RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV
Sbjct: 121 RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV 180

Query: 181 YNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 215
           YNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK
Sbjct: 181 YNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 214

[Close]
BLAST of CsaV3_1G045690 vs. NCBI nr
Match: XP_008462724.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 2.2e-109
Identity = 204/214 (95.33%), Postives = 205/214 (95.79%), Query Frame = 0 

Query: 1   MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMER 60
           MLHFKNFATG IRF YI L R FSNSNS VNGSTAPSKDDYFAAIHHISHIVRRDFYMER
Sbjct: 1   MLHFKNFATGAIRFHYISLIRCFSNSNSSVNGSTAPSKDDYFAAIHHISHIVRRDFYMER 60

Query: 61  TLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLART 120
           TLNKLRIS LNSELVFRVLRACSN GTESFRFFNWACSHNPSYQPTTLE EELVKTLART
Sbjct: 61  TLNKLRISYLNSELVFRVLRACSNCGTESFRFFNWACSHNPSYQPTTLELEELVKTLART 120

Query: 121 RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV 180
           RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV
Sbjct: 121 RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV 180

Query: 181 YNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 215
           YNALLFALCEVKMFHGAYALIRRMI+KGVTPDKK
Sbjct: 181 YNALLFALCEVKMFHGAYALIRRMIKKGVTPDKK 214

[Close]
BLAST of CsaV3_1G045690 vs. NCBI nr
Match: XP_022960812.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita moschata])

HSP 1 Score: 373.6 bits (958), Expect = 9.4e-100
Identity = 192/226 (84.96%), Postives = 198/226 (87.61%), Query Frame = 0 

Query: 1   MLHFKNFA------------TGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHI 60
           M HFK FA            T  IRF  IFL RHFS SNS  NGS  PSKDDYFAAIHHI
Sbjct: 1   MFHFKIFATQFSIIPKLHRITDAIRFHNIFLIRHFSTSNSSSNGSGTPSKDDYFAAIHHI 60

Query: 61  SHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTL 120
           S+IVRRD YMERTLNKLRIS LNSELVFRVLRACSNSGTESFRFFNWACS+NPSYQPTTL
Sbjct: 61  SNIVRRDIYMERTLNKLRISYLNSELVFRVLRACSNSGTESFRFFNWACSNNPSYQPTTL 120

Query: 121 EFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQC 180
           EFEELVKTLART+KYTTMWKVL QMKTQNLKISPETISF+I+EYGKQGLVD AVTIFNQC
Sbjct: 121 EFEELVKTLARTKKYTTMWKVLHQMKTQNLKISPETISFVIEEYGKQGLVDGAVTIFNQC 180

Query: 181 SKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 215
           SKSIDCPQTVEVYNALLFALCE+KMFHGAYALIRRMIRKGVTPDKK
Sbjct: 181 SKSIDCPQTVEVYNALLFALCEIKMFHGAYALIRRMIRKGVTPDKK 226

[Close]
BLAST of CsaV3_1G045690 vs. NCBI nr
Match: XP_023516681.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 1.6e-99
Identity = 191/226 (84.51%), Postives = 198/226 (87.61%), Query Frame = 0 

Query: 1   MLHFKNFAT------------GLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHI 60
           M HFK F T              IRF  IFL RHFS SNS  N S  PSKDDYFAAIHHI
Sbjct: 1   MFHFKIFTTQFRIIPKLHRIAAAIRFHNIFLIRHFSTSNSSSNVSGKPSKDDYFAAIHHI 60

Query: 61  SHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTL 120
           S+IVRRDFY+ERTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACS+NPSYQPTTL
Sbjct: 61  SNIVRRDFYLERTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSNNPSYQPTTL 120

Query: 121 EFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQC 180
           EFEELVKTLART+KYTTMWKVL QMKTQNLKISPETISF+I+EYGKQGLVD AVTIFNQC
Sbjct: 121 EFEELVKTLARTKKYTTMWKVLHQMKTQNLKISPETISFVIEEYGKQGLVDGAVTIFNQC 180

Query: 181 SKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 215
           SKSIDCPQTVEVYNALLFALCE+KMFHGAYALIRRMIRKGVTPDKK
Sbjct: 181 SKSIDCPQTVEVYNALLFALCEIKMFHGAYALIRRMIRKGVTPDKK 226

[Close]
BLAST of CsaV3_1G045690 vs. NCBI nr
Match: XP_022988097.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 2.7e-99
Identity = 191/226 (84.51%), Postives = 197/226 (87.17%), Query Frame = 0 

Query: 1   MLHFKNFA------------TGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHI 60
           M HFK F             T  IRF  IFL RHFS SNS  NGS  PSKDDYFAAIHHI
Sbjct: 1   MFHFKIFTTQFSIIPKLHRITDAIRFHNIFLIRHFSTSNSSSNGSGTPSKDDYFAAIHHI 60

Query: 61  SHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTL 120
           S+IVRRD YMERTLNKLRIS LNSELVFRVLRACSNSGTESFRFFNWACS+NPSYQPTTL
Sbjct: 61  SNIVRRDIYMERTLNKLRISYLNSELVFRVLRACSNSGTESFRFFNWACSNNPSYQPTTL 120

Query: 121 EFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQC 180
           EFEELVKTLART+KYTTMWKVL QMKTQNLKISPETISF+I+EYGKQGLVD AVTIFNQC
Sbjct: 121 EFEELVKTLARTKKYTTMWKVLHQMKTQNLKISPETISFVIEEYGKQGLVDGAVTIFNQC 180

Query: 181 SKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 215
           SKSIDCPQTVEVYNALLFALCE+KMFHGAYALIRRMIRKGVTPDKK
Sbjct: 181 SKSIDCPQTVEVYNALLFALCEIKMFHGAYALIRRMIRKGVTPDKK 226

[Close]
BLAST of CsaV3_1G045690 vs. TAIR10
Match: AT5G18390.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 229.9 bits (585), Expect = 3.0e-60
Identity = 116/194 (59.79%), Postives = 149/194 (76.80%), Query Frame = 0 

Query: 21  RHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLR 80
           RHF++   L +  + P+K DYFAAI+H+ +IVRR+ + ER+LN LR+  + SE VFRVLR
Sbjct: 27  RHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHPERSLNSLRLP-VTSEFVFRVLR 86

Query: 81  ACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKI 140
           A S S  +S RFFNWA S NPSY PT++E+EEL K+LA  +KY +MWK+L QMK  +L I
Sbjct: 87  ATSRSSNDSLRFFNWARS-NPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDI 146

Query: 141 SPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYAL 200
           S ET+ FII++YGK G VD AV +FN   K++ C QTV+VYN+LL ALC+VKMFHGAYAL
Sbjct: 147 SGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYAL 206

Query: 201 IRRMIRKGVTPDKK 215
           IRRMIRKG+ PDK+
Sbjct: 207 IRRMIRKGLKPDKR 218

[Close]
BLAST of CsaV3_1G045690 vs. TAIR10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-07
Identity = 49/185 (26.49%), Postives = 90/185 (48.65%), Query Frame = 0 

Query: 28  SLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGT 87
           S V  ST P + +    +  I  +   D  ME  L+++++ +L+ +L+  VL    ++  
Sbjct: 120 SCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKL-DLSHDLIVEVLERFRHARK 179

Query: 88  ESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISF 147
            +FRFF WA +    +   +  +  ++  LA+TR++ TM  VL +M T+ L ++ ET + 
Sbjct: 180 PAFRFFCWA-AERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTI 239

Query: 148 IIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRK 207
            ++ +        AV IF +  K       VE  N LL +L   K+   A  L  + +++
Sbjct: 240 AMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKE 297

Query: 208 GVTPD 213
             TP+
Sbjct: 300 RFTPN 297

[Close]
BLAST of CsaV3_1G045690 vs. TAIR10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 53.5 bits (127), Expect = 3.9e-07
Identity = 49/185 (26.49%), Postives = 90/185 (48.65%), Query Frame = 0 

Query: 28  SLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGT 87
           S V  ST P + +    +  I  +   D  ME  L+++++ +L+ +L+  VL    ++  
Sbjct: 120 SCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKL-DLSHDLIVEVLERFRHARK 179

Query: 88  ESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISF 147
            +FRFF WA +    +   +  +  ++  LA+TR++ TM  VL +M T+ L ++ ET + 
Sbjct: 180 PAFRFFCWA-AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTI 239

Query: 148 IIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRK 207
            ++ +        AV IF +  K       VE  N LL +L   K+   A  L  + +++
Sbjct: 240 AMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKE 297

Query: 208 GVTPD 213
             TP+
Sbjct: 300 RFTPN 297

[Close]
BLAST of CsaV3_1G045690 vs. TAIR10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 53.5 bits (127), Expect = 3.9e-07
Identity = 49/185 (26.49%), Postives = 90/185 (48.65%), Query Frame = 0 

Query: 28  SLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGT 87
           S V  ST P + +    +  I  +   D  ME  L+++++ +L+ +L+  VL    ++  
Sbjct: 119 SCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKL-DLSHDLIVEVLERFRHARK 178

Query: 88  ESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISF 147
            +FRFF WA +    +   +  +  ++  LA+TR++ TM  VL +M T+ L ++ ET + 
Sbjct: 179 PAFRFFCWA-AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTI 238

Query: 148 IIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRK 207
            ++ +        AV IF +  K       VE  N LL +L   K+   A  L  + +++
Sbjct: 239 AMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKE 296

Query: 208 GVTPD 213
             TP+
Sbjct: 299 RFTPN 296

[Close]
BLAST of CsaV3_1G045690 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 8.7e-07
Identity = 25/80 (31.25%), Postives = 45/80 (56.25%), Query Frame = 0 

Query: 88  ESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISF 147
           +S  FFNWA S +     +   + E++    + R++   W ++  MK++N++IS ET + 
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI 191

Query: 148 IIQEYGKQGLVDNAVTIFNQ 168
           +I+ Y + GL   AV  FN+
Sbjct: 192 LIRRYVRAGLASEAVHCFNR 211

[Close]
BLAST of CsaV3_1G045690 vs. Swiss-Prot
Match: sp|Q94JX6|PP391_ARATH (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 5.5e-59
Identity = 116/194 (59.79%), Postives = 149/194 (76.80%), Query Frame = 0 

Query: 21  RHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLR 80
           RHF++   L +  + P+K DYFAAI+H+ +IVRR+ + ER+LN LR+  + SE VFRVLR
Sbjct: 27  RHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHPERSLNSLRLP-VTSEFVFRVLR 86

Query: 81  ACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKI 140
           A S S  +S RFFNWA S NPSY PT++E+EEL K+LA  +KY +MWK+L QMK  +L I
Sbjct: 87  ATSRSSNDSLRFFNWARS-NPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDI 146

Query: 141 SPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYAL 200
           S ET+ FII++YGK G VD AV +FN   K++ C QTV+VYN+LL ALC+VKMFHGAYAL
Sbjct: 147 SGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYAL 206

Query: 201 IRRMIRKGVTPDKK 215
           IRRMIRKG+ PDK+
Sbjct: 207 IRRMIRKGLKPDKR 218

[Close]
BLAST of CsaV3_1G045690 vs. Swiss-Prot
Match: sp|Q3EAF8|PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.4e-06
Identity = 49/185 (26.49%), Postives = 90/185 (48.65%), Query Frame = 0 

Query: 28  SLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGT 87
           S V  ST P + +    +  I  +   D  ME  L+++++ +L+ +L+  VL    ++  
Sbjct: 120 SCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKL-DLSHDLIVEVLERFRHARK 179

Query: 88  ESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISF 147
            +FRFF WA +    +   +  +  ++  LA+TR++ TM  VL +M T+ L ++ ET + 
Sbjct: 180 PAFRFFCWA-AERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTI 239

Query: 148 IIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRK 207
            ++ +        AV IF +  K       VE  N LL +L   K+   A  L  + +++
Sbjct: 240 AMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKE 297

Query: 208 GVTPD 213
             TP+
Sbjct: 300 RFTPN 297

[Close]
BLAST of CsaV3_1G045690 vs. Swiss-Prot
Match: sp|Q9LZP3|PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.0e-06
Identity = 49/185 (26.49%), Postives = 90/185 (48.65%), Query Frame = 0 

Query: 28  SLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGT 87
           S V  ST P + +    +  I  +   D  ME  L+++++ +L+ +L+  VL    ++  
Sbjct: 120 SCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKL-DLSHDLIVEVLERFRHARK 179

Query: 88  ESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISF 147
            +FRFF WA +    +   +  +  ++  LA+TR++ TM  VL +M T+ L ++ ET + 
Sbjct: 180 PAFRFFCWA-AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTI 239

Query: 148 IIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRK 207
            ++ +        AV IF +  K       VE  N LL +L   K+   A  L  + +++
Sbjct: 240 AMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKE 297

Query: 208 GVTPD 213
             TP+
Sbjct: 300 RFTPN 297

[Close]
BLAST of CsaV3_1G045690 vs. Swiss-Prot
Match: sp|Q9LEQ7|PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.0e-06
Identity = 49/185 (26.49%), Postives = 90/185 (48.65%), Query Frame = 0 

Query: 28  SLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNSGT 87
           S V  ST P + +    +  I  +   D  ME  L+++++ +L+ +L+  VL    ++  
Sbjct: 119 SCVESSTNPEEVERVCKV--IDELFALDRNMEAVLDEMKL-DLSHDLIVEVLERFRHARK 178

Query: 88  ESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISF 147
            +FRFF WA +    +   +  +  ++  LA+TR++ TM  VL +M T+ L ++ ET + 
Sbjct: 179 PAFRFFCWA-AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTI 238

Query: 148 IIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRK 207
            ++ +        AV IF +  K       VE  N LL +L   K+   A  L  + +++
Sbjct: 239 AMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKE 296

Query: 208 GVTPD 213
             TP+
Sbjct: 299 RFTPN 296

[Close]
BLAST of CsaV3_1G045690 vs. Swiss-Prot
Match: sp|Q9LN22|PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.6e-05
Identity = 25/80 (31.25%), Postives = 45/80 (56.25%), Query Frame = 0 

Query: 88  ESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQNLKISPETISF 147
           +S  FFNWA S +     +   + E++    + R++   W ++  MK++N++IS ET + 
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI 191

Query: 148 IIQEYGKQGLVDNAVTIFNQ 168
           +I+ Y + GL   AV  FN+
Sbjct: 192 LIRRYVRAGLASEAVHCFNR 211

[Close]
BLAST of CsaV3_1G045690 vs. TrEMBL
Match: tr|A0A0A0M105|A0A0A0M105_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695420 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.3e-117
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMER 60
           MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMER
Sbjct: 1   MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMER 60

Query: 61  TLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLART 120
           TLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLART
Sbjct: 61  TLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLART 120

Query: 121 RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV 180
           RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV
Sbjct: 121 RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV 180

Query: 181 YNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 215
           YNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK
Sbjct: 181 YNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 214

[Close]
BLAST of CsaV3_1G045690 vs. TrEMBL
Match: tr|A0A1S3CJ74|A0A1S3CJ74_CUCME (pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501022 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.5e-109
Identity = 204/214 (95.33%), Postives = 205/214 (95.79%), Query Frame = 0 

Query: 1   MLHFKNFATGLIRFRYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMER 60
           MLHFKNFATG IRF YI L R FSNSNS VNGSTAPSKDDYFAAIHHISHIVRRDFYMER
Sbjct: 1   MLHFKNFATGAIRFHYISLIRCFSNSNSSVNGSTAPSKDDYFAAIHHISHIVRRDFYMER 60

Query: 61  TLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLART 120
           TLNKLRIS LNSELVFRVLRACSN GTESFRFFNWACSHNPSYQPTTLE EELVKTLART
Sbjct: 61  TLNKLRISYLNSELVFRVLRACSNCGTESFRFFNWACSHNPSYQPTTLELEELVKTLART 120

Query: 121 RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV 180
           RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV
Sbjct: 121 RKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEV 180

Query: 181 YNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 215
           YNALLFALCEVKMFHGAYALIRRMI+KGVTPDKK
Sbjct: 181 YNALLFALCEVKMFHGAYALIRRMIKKGVTPDKK 214

[Close]
BLAST of CsaV3_1G045690 vs. TrEMBL
Match: tr|W9RHW0|W9RHW0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024459 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 2.0e-66
Identity = 132/194 (68.04%), Postives = 156/194 (80.41%), Query Frame = 0 

Query: 22  HFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRA 81
           H+ NS        + SKD+YFAAIHHIS+IV+RDFYMERTLNKLRI+ ++S+LVFRVLRA
Sbjct: 41  HYQNST-----KPSSSKDNYFAAIHHISNIVQRDFYMERTLNKLRIAAVDSDLVFRVLRA 100

Query: 82  CSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKT-QNLKI 141
           C   G ES RFFNWA SH PSY+PT++E EEL K LART+KY +MWK+L QMKT  NL I
Sbjct: 101 CHKFGPESLRFFNWARSHQPSYRPTSVELEELAKNLARTKKYESMWKILQQMKTNNNLII 160

Query: 142 SPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYAL 201
           S ET+ FII+EYGKQGLVD A  +FN+  K  +C QTVEVYN+LLFALCEVK+FHGAYAL
Sbjct: 161 SSETLCFIIEEYGKQGLVDQAAEVFNRVPKIFNCSQTVEVYNSLLFALCEVKLFHGAYAL 220

Query: 202 IRRMIRKGVTPDKK 215
           +RRMIRK V PDK+
Sbjct: 221 VRRMIRKEVVPDKR 229

[Close]
BLAST of CsaV3_1G045690 vs. TrEMBL
Match: tr|A0A2P5BB16|A0A2P5BB16_PARAD (Tetratricopeptide-like helical domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_255010 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.6e-66
Identity = 129/190 (67.89%), Postives = 161/190 (84.74%), Query Frame = 0 

Query: 26  SNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNS 85
           + +  NG T  S+DDYFAAIHHIS+IV+RDFYMERTLNK+RIS ++SELV+RVLRACS S
Sbjct: 40  TTATTNGKT--SRDDYFAAIHHISNIVQRDFYMERTLNKMRIS-VDSELVYRVLRACSKS 99

Query: 86  GTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQN-LKISPET 145
           GTES RFFNWA +H+PSY+PTT+E EEL +TLAR +KY +MWK+L QM+T + L +S +T
Sbjct: 100 GTESLRFFNWARTHHPSYRPTTVELEELARTLARAKKYESMWKILQQMQTNHGLIVSSDT 159

Query: 146 ISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRM 205
           + FII+EYGKQGLVD AV +FN+  K   C QTVE+YN+LLF+LCEVK+FHGAYAL+RRM
Sbjct: 160 LCFIIEEYGKQGLVDRAVEVFNRVPKIFRCSQTVELYNSLLFSLCEVKLFHGAYALVRRM 219

Query: 206 IRKGVTPDKK 215
           IRKG+ PDK+
Sbjct: 220 IRKGLVPDKR 226

[Close]
BLAST of CsaV3_1G045690 vs. TrEMBL
Match: tr|A0A2P5FYT5|A0A2P5FYT5_9ROSA (Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_010220 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.0e-65
Identity = 128/190 (67.37%), Postives = 161/190 (84.74%), Query Frame = 0 

Query: 26  SNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSELVFRVLRACSNS 85
           + +  NG T  S+DDYFAAIHHIS+IV+RDFYMERTLNK+RIS ++SELV+RVLRACS S
Sbjct: 40  TTAATNGKT--SRDDYFAAIHHISNIVQRDFYMERTLNKMRIS-VDSELVYRVLRACSKS 99

Query: 86  GTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMKTQN-LKISPET 145
           GTES RFFNWA +H+PSY+PTT+E EEL +TLAR +KY +MWK+L QM+T + L +S +T
Sbjct: 100 GTESLRFFNWARTHHPSYRPTTVELEELARTLARAKKYESMWKILQQMQTNHGLIVSSDT 159

Query: 146 ISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRM 205
           + FII+EYGKQGLVD AV +FN+  K   C QTVE++N+LLF+LCEVK+FHGAYAL+RRM
Sbjct: 160 LCFIIEEYGKQGLVDQAVEVFNRVPKIFRCSQTVELHNSLLFSLCEVKLFHGAYALVRRM 219

Query: 206 IRKGVTPDKK 215
           IRKG+ PDK+
Sbjct: 220 IRKGLVPDKR 226

The following BLAST results are available for this feature:
BLAST of CsaV3_1G045690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142520.15.0e-117100.00PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial ... [more]
XP_008462724.12.2e-10995.33PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial ... [more]
XP_022960812.19.4e-10084.96pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita ... [more]
XP_023516681.11.6e-9984.51pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita ... [more]
XP_022988097.12.7e-9984.51pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita ... [more]
BLAST of CsaV3_1G045690 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18390.13.0e-6059.79Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62540.13.0e-0726.49Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62470.13.9e-0726.49Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G14820.13.9e-0726.49Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G20300.18.7e-0731.25Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsaV3_1G045690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94JX6|PP391_ARATH5.5e-5959.79Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidop... [more]
sp|Q3EAF8|PP294_ARATH5.4e-0626.49Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
sp|Q9LZP3|PP293_ARATH7.0e-0626.49Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
sp|Q9LEQ7|PP382_ARATH7.0e-0626.49Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
sp|Q9LN22|PPR54_ARATH1.6e-0531.25Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop... [more]
BLAST of CsaV3_1G045690 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M105|A0A0A0M105_CUCSA3.3e-117100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695420 PE=4 SV=1[more]
tr|A0A1S3CJ74|A0A1S3CJ74_CUCME1.5e-10995.33pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucumis ... [more]
tr|W9RHW0|W9RHW0_9ROSA2.0e-6668.04Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024459 PE=4 SV=1[more]
tr|A0A2P5BB16|A0A2P5BB16_PARAD2.6e-6667.89Tetratricopeptide-like helical domain containing protein OS=Parasponia andersoni... [more]
tr|A0A2P5FYT5|A0A2P5FYT5_9ROSA1.0e-6567.37Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_010220 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G045690.1CsaV3_1G045690.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 78..251
e-value: 2.2E-27
score: 98.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 252..451
e-value: 4.0E-37
score: 130.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 390..421
e-value: 5.6E-4
score: 17.9
coord: 356..387
e-value: 2.7E-7
score: 28.3
coord: 285..318
e-value: 7.1E-5
score: 20.7
coord: 254..283
e-value: 0.0022
score: 16.0
coord: 215..246
e-value: 1.2E-4
score: 20.0
coord: 180..212
e-value: 3.6E-6
score: 24.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 254..278
e-value: 0.95
score: 9.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 207..240
e-value: 2.0E-10
score: 40.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 281..327
e-value: 4.7E-8
score: 33.0
coord: 359..398
e-value: 4.7E-9
score: 36.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 247..281
score: 7.366
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 317..351
score: 9.701
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..421
score: 10.052
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 352..386
score: 10.424
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 141..175
score: 6.588
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 282..316
score: 10.161
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 106..140
score: 6.336
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..211
score: 10.841
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 212..246
score: 12.737
NoneNo IPR availablePANTHERPTHR24015:SF503SUBFAMILY NOT NAMEDcoord: 32..446
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 32..446

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G045690CSPI01G33810Wild cucumber (PI 183967)cpicucB000
CsaV3_1G045690Cucsa.332330Cucumber (Gy14) v1cgycucB513
CsaV3_1G045690CsGy1G032370Cucumber (Gy14) v2cgybcucB001
CsaV3_1G045690Cla003767Watermelon (97103) v1cucwmB101
CsaV3_1G045690MELO3C024683Melon (DHL92) v3.5.1cucmeB045
CsaV3_1G045690ClCG06G009060Watermelon (Charleston Gray)cucwcgB091
CsaV3_1G045690Lsi06G008100Bottle gourd (USVL1VR-Ls)cuclsiB068
CsaV3_1G045690MELO3C024683.2Melon (DHL92) v3.6.1cucmedB042
CsaV3_1G045690Cla97C06G118870Watermelon (97103) v2cucwmbB079
CsaV3_1G045690Bhi02G001021Wax gourdcucwgoB112
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G045690Wax gourdcucwgoB099
CsaV3_1G045690Silver-seed gourdcarcucB0949
CsaV3_1G045690Cucurbita maxima (Rimu)cmacucB0099
CsaV3_1G045690Cucurbita moschata (Rifu)cmocucB0090
CsaV3_1G045690Cucurbita pepo (Zucchini)cpecucB0799
CsaV3_1G045690Bottle gourd (USVL1VR-Ls)cuclsiB089
CsaV3_1G045690Watermelon (Charleston Gray)cucwcgB083
CsaV3_1G045690Watermelon (97103) v2cucwmbB072