Cla97C06G118870 (gene) Watermelon (97103) v2

Overview
NameCla97C06G118870
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCla97Chr06 : 13600534 .. 13601967 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATGCAATTTGTTTTTAAGGTCCGATCTCACTTCGGAGGTGGAAAATCAACTAGGCTTGGTTTGATTTATGATTATGTTGAAAATGCCAAAAAATATGAGCCCAAGTACATTTGTCTCATCCGCCATTTCAGTACGTCAAACTCTTCTTGGAGTGGCTCCGTCGCGCCTTCTAAAGATGACTATTTTGCCGCAATCCACCATATCTCCCACATTGTTCGCCGAGACTTCTACATGGAGCGCACCCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTTGTTTTTAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTCCGTTTCTTCAATTGGGCTTGCACTCACAACCCCTCTTACAAACCCACTACCCTTGAATTCGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACCACAATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTCAAAATTTCACCGGAAACGATATCATTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTCGATAATGCAGTTACCATATTCAATCAATGTTCTAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACAAAAGAAGGATTTGTGCCTGATATAGGGACTTTTAATTCTCTGATTAATGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATAAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTAATTCCAGCAACTTCAAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATGGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAATGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTAAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

mRNA sequence

ATGCAAATGCAATTTGTTTTTAAGGTCCGATCTCACTTCGGAGGTGGAAAATCAACTAGGCTTGGTTTGATTTATGATTATGTTGAAAATGCCAAAAAATATGAGCCCAAGTACATTTGTCTCATCCGCCATTTCAGTACGTCAAACTCTTCTTGGAGTGGCTCCGTCGCGCCTTCTAAAGATGACTATTTTGCCGCAATCCACCATATCTCCCACATTGTTCGCCGAGACTTCTACATGGAGCGCACCCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTTGTTTTTAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTCCGTTTCTTCAATTGGGCTTGCACTCACAACCCCTCTTACAAACCCACTACCCTTGAATTCGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACCACAATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTCAAAATTTCACCGGAAACGATATCATTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTCGATAATGCAGTTACCATATTCAATCAATGTTCTAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACAAAAGAAGGATTTGTGCCTGATATAGGGACTTTTAATTCTCTGATTAATGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATAAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTAATTCCAGCAACTTCAAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATGGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAATGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTAAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

Coding sequence (CDS)

ATGCAAATGCAATTTGTTTTTAAGGTCCGATCTCACTTCGGAGGTGGAAAATCAACTAGGCTTGGTTTGATTTATGATTATGTTGAAAATGCCAAAAAATATGAGCCCAAGTACATTTGTCTCATCCGCCATTTCAGTACGTCAAACTCTTCTTGGAGTGGCTCCGTCGCGCCTTCTAAAGATGACTATTTTGCCGCAATCCACCATATCTCCCACATTGTTCGCCGAGACTTCTACATGGAGCGCACCCTCAACAAGCTCCAAATCTCCTACCTCAATTCTGAGCTTGTTTTTAGAGTCCTTCGCGCTTGCTCCAACTCTGGTACTGAGTCCTTCCGTTTCTTCAATTGGGCTTGCACTCACAACCCCTCTTACAAACCCACTACCCTTGAATTCGAAGAGCTCGTCAAAACCCTAGCTCGGACCAAAAAGTATACCACAATGTGGAAAGTTCTTCTTCAGATGAAGACGCAGAATCTCAAAATTTCACCGGAAACGATATCATTCATAATTCAAGAGTATGGTAAGCAAGGCCTTGTCGATAATGCAGTTACCATATTCAATCAATGTTCTAAATCTATCGATTGTCCACAAACAGTTGAGGTCTATAACGCATTACTTTTTGCGCTTTGTGAGGTTAAGATGTTTCATGGAGCTTATGCGTTGATTAGGAGGATGATTAGAAAAGGGGTAACTCCTGATAAAAAGACTTATGGAACTCTTGTAACTGGATGGTGCTCAGCGGGGAAGATGAGGGAAGCTCAGGAGTTCTTGGAGGAAATGAGCCAGAAGGGGTTCAATCCTCCTTTGCGAGGTCGTGATCTTTTGGTAGAAGGATTGCTGAATGCAGGGTATTTAGAATCTGCTAAGGATATGGTTAGAAAAATGACAAAAGAAGGATTTGTGCCTGATATAGGGACTTTTAATTCTCTGATTAATGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATAAATATTTTTCATGAGGTGTGCAAGTTGGGGCTTTGTCCTGATATAAATACTTACAAGATTTTAATTCCAGCAACTTCAAAAGTAGGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTGTATGGAGGATGGACATATACCGTTTCCAAGTCTTTATGGACCAATACTTAAAGGAATGTGTAAAATGGGTCAGTTTGATGATGCATTTTGCTTTTTCAGTGATATGAAACATAAGGGGCATCCACCAAATCGGCCAGTGTACACAATGTTGATAACAATGTGTGGACGTGGAGGGAGATTTGTTGATGCTGCTAATTACTTGATGGAAATGGCTGAATTTGGTTTACCTCCAATTTCAAGGTGCTTTGATATGGTTACTGATGGATTAAAGAACTGTGGAAAGCATGATTTAGCTAAGAAGATCGAGCAGCTTGAAGTTTCTATTCGAGGCATTTGA

Protein sequence

MQMQFVFKVRSHFGGGKSTRLGLIYDYVENAKKYEPKYICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMREAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGFVPDIGTFNSLINVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCMEDGHIPFPSLYGPILKGMCKMGQFDDAFCFFSDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEMAEFGLPPISRCFDMVTDGLKNCGKHDLAKKIEQLEVSIRGI
Homology
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BLAST of Cla97C06G118870 vs. NCBI nr
Match: XP_004142520.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis sativus] >KGN66807.1 hypothetical protein Csa_1G695420 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 8.9e-101
Identity = 187/200 (93.50%), Postives = 193/200 (96.50%), Query Frame = 0 

Query: 37  KYICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSEL 96
           +YI L RHFS SNS  +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+IS LNSEL
Sbjct: 15  RYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSEL 74

Query: 97  VFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMK 156
           VFRVLRACSNSGTESFRFFNWAC+HNPSY+PTTLEFEELVKTLART+KYTTMWKVLLQMK
Sbjct: 75  VFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMK 134

Query: 157 TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF 216
           TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF
Sbjct: 135 TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF 194

Query: 217 HGAYALIRRMIRKGVTPDKK 237
           HGAYALIRRMIRKGVTPDKK
Sbjct: 195 HGAYALIRRMIRKGVTPDKK 214

[Close]
BLAST of Cla97C06G118870 vs. NCBI nr
Match: XP_008462724.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis melo])

HSP 1 Score: 375.6 bits (963), Expect = 2.6e-100
Identity = 186/199 (93.47%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 38  YICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELV 97
           YI LIR FS SNSS +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+ISYLNSELV
Sbjct: 16  YISLIRCFSNSNSSVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISYLNSELV 75

Query: 98  FRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKT 157
           FRVLRACSN GTESFRFFNWAC+HNPSY+PTTLE EELVKTLART+KYTTMWKVLLQMKT
Sbjct: 76  FRVLRACSNCGTESFRFFNWACSHNPSYQPTTLELEELVKTLARTRKYTTMWKVLLQMKT 135

Query: 158 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 217
           QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH
Sbjct: 136 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 195

Query: 218 GAYALIRRMIRKGVTPDKK 237
           GAYALIRRMI+KGVTPDKK
Sbjct: 196 GAYALIRRMIKKGVTPDKK 214

[Close]
BLAST of Cla97C06G118870 vs. NCBI nr
Match: XP_022960812.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita moschata])

HSP 1 Score: 367.9 bits (943), Expect = 5.4e-98
Identity = 182/198 (91.92%), Postives = 191/198 (96.46%), Query Frame = 0 

Query: 39  ICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVF 98
           I LIRHFSTSNSS +GS  PSKDDYFAAIHHIS+IVRRD YMERTLNKL+ISYLNSELVF
Sbjct: 29  IFLIRHFSTSNSSSNGSGTPSKDDYFAAIHHISNIVRRDIYMERTLNKLRISYLNSELVF 88

Query: 99  RVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQ 158
           RVLRACSNSGTESFRFFNWAC++NPSY+PTTLEFEELVKTLARTKKYTTMWKVL QMKTQ
Sbjct: 89  RVLRACSNSGTESFRFFNWACSNNPSYQPTTLEFEELVKTLARTKKYTTMWKVLHQMKTQ 148

Query: 159 NLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHG 218
           NLKISPETISF+I+EYGKQGLVD AVTIFNQCSKSIDCPQTVEVYNALLFALCE+KMFHG
Sbjct: 149 NLKISPETISFVIEEYGKQGLVDGAVTIFNQCSKSIDCPQTVEVYNALLFALCEIKMFHG 208

Query: 219 AYALIRRMIRKGVTPDKK 237
           AYALIRRMIRKGVTPDKK
Sbjct: 209 AYALIRRMIRKGVTPDKK 226

[Close]
BLAST of Cla97C06G118870 vs. NCBI nr
Match: XP_022988097.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita maxima])

HSP 1 Score: 367.9 bits (943), Expect = 5.4e-98
Identity = 182/198 (91.92%), Postives = 191/198 (96.46%), Query Frame = 0 

Query: 39  ICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVF 98
           I LIRHFSTSNSS +GS  PSKDDYFAAIHHIS+IVRRD YMERTLNKL+ISYLNSELVF
Sbjct: 29  IFLIRHFSTSNSSSNGSGTPSKDDYFAAIHHISNIVRRDIYMERTLNKLRISYLNSELVF 88

Query: 99  RVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQ 158
           RVLRACSNSGTESFRFFNWAC++NPSY+PTTLEFEELVKTLARTKKYTTMWKVL QMKTQ
Sbjct: 89  RVLRACSNSGTESFRFFNWACSNNPSYQPTTLEFEELVKTLARTKKYTTMWKVLHQMKTQ 148

Query: 159 NLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHG 218
           NLKISPETISF+I+EYGKQGLVD AVTIFNQCSKSIDCPQTVEVYNALLFALCE+KMFHG
Sbjct: 149 NLKISPETISFVIEEYGKQGLVDGAVTIFNQCSKSIDCPQTVEVYNALLFALCEIKMFHG 208

Query: 219 AYALIRRMIRKGVTPDKK 237
           AYALIRRMIRKGVTPDKK
Sbjct: 209 AYALIRRMIRKGVTPDKK 226

[Close]
BLAST of Cla97C06G118870 vs. NCBI nr
Match: XP_023516681.1 (pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 3.9e-96
Identity = 180/198 (90.91%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 39  ICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVF 98
           I LIRHFSTSNSS + S  PSKDDYFAAIHHIS+IVRRDFY+ERTLNKL+IS LNSELVF
Sbjct: 29  IFLIRHFSTSNSSSNVSGKPSKDDYFAAIHHISNIVRRDFYLERTLNKLRISNLNSELVF 88

Query: 99  RVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQ 158
           RVLRACSNSGTESFRFFNWAC++NPSY+PTTLEFEELVKTLARTKKYTTMWKVL QMKTQ
Sbjct: 89  RVLRACSNSGTESFRFFNWACSNNPSYQPTTLEFEELVKTLARTKKYTTMWKVLHQMKTQ 148

Query: 159 NLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHG 218
           NLKISPETISF+I+EYGKQGLVD AVTIFNQCSKSIDCPQTVEVYNALLFALCE+KMFHG
Sbjct: 149 NLKISPETISFVIEEYGKQGLVDGAVTIFNQCSKSIDCPQTVEVYNALLFALCEIKMFHG 208

Query: 219 AYALIRRMIRKGVTPDKK 237
           AYALIRRMIRKGVTPDKK
Sbjct: 209 AYALIRRMIRKGVTPDKK 226

[Close]
BLAST of Cla97C06G118870 vs. TrEMBL
Match: tr|A0A0A0M105|A0A0A0M105_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695420 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.9e-101
Identity = 187/200 (93.50%), Postives = 193/200 (96.50%), Query Frame = 0 

Query: 37  KYICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSEL 96
           +YI L RHFS SNS  +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+IS LNSEL
Sbjct: 15  RYIFLNRHFSNSNSLVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISNLNSEL 74

Query: 97  VFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMK 156
           VFRVLRACSNSGTESFRFFNWAC+HNPSY+PTTLEFEELVKTLART+KYTTMWKVLLQMK
Sbjct: 75  VFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKVLLQMK 134

Query: 157 TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF 216
           TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF
Sbjct: 135 TQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMF 194

Query: 217 HGAYALIRRMIRKGVTPDKK 237
           HGAYALIRRMIRKGVTPDKK
Sbjct: 195 HGAYALIRRMIRKGVTPDKK 214

[Close]
BLAST of Cla97C06G118870 vs. TrEMBL
Match: tr|A0A1S3CJ74|A0A1S3CJ74_CUCME (pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501022 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.7e-100
Identity = 186/199 (93.47%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 38  YICLIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELV 97
           YI LIR FS SNSS +GS APSKDDYFAAIHHISHIVRRDFYMERTLNKL+ISYLNSELV
Sbjct: 16  YISLIRCFSNSNSSVNGSTAPSKDDYFAAIHHISHIVRRDFYMERTLNKLRISYLNSELV 75

Query: 98  FRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKT 157
           FRVLRACSN GTESFRFFNWAC+HNPSY+PTTLE EELVKTLART+KYTTMWKVLLQMKT
Sbjct: 76  FRVLRACSNCGTESFRFFNWACSHNPSYQPTTLELEELVKTLARTRKYTTMWKVLLQMKT 135

Query: 158 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 217
           QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH
Sbjct: 136 QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFH 195

Query: 218 GAYALIRRMIRKGVTPDKK 237
           GAYALIRRMI+KGVTPDKK
Sbjct: 196 GAYALIRRMIKKGVTPDKK 214

[Close]
BLAST of Cla97C06G118870 vs. TrEMBL
Match: tr|M5WME7|M5WME7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G355300 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.6e-66
Identity = 129/204 (63.24%), Postives = 167/204 (81.86%), Query Frame = 0 

Query: 35  EPKYIC-LIRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLN 94
           +P+  C L+RH +T N++    V P+KDDYF+AI HI++IVRRD +MERTLNKL+I+ ++
Sbjct: 17  KPQTHCVLLRHLATVNAAPQNRVVPTKDDYFSAIQHITNIVRRDHFMERTLNKLRIT-VD 76

Query: 95  SELVFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLL 154
           SELV+RVLRACS +GTES RFFNWA TH+P+Y PTTLE EELVKTLARTKKY +MWK+L 
Sbjct: 77  SELVYRVLRACSAAGTESLRFFNWARTHHPTYHPTTLELEELVKTLARTKKYESMWKLLQ 136

Query: 155 QMKTQN-LKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCE 214
            M+T + L +S E++ F+I+EYG  GLVD AV +FN+  K+ +C QTVEVYNALLF+LC+
Sbjct: 137 SMQTHHGLTLSQESLCFVIEEYGNHGLVDQAVELFNRAPKTFNCLQTVEVYNALLFSLCQ 196

Query: 215 VKMFHGAYALIRRMIRKGVTPDKK 237
            K+FH AYAL+RRMIRKG+ PDK+
Sbjct: 197 AKLFHAAYALVRRMIRKGLVPDKR 219

[Close]
BLAST of Cla97C06G118870 vs. TrEMBL
Match: tr|A0A2P5BB16|A0A2P5BB16_PARAD (Tetratricopeptide-like helical domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_255010 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.6e-66
Identity = 127/179 (70.95%), Postives = 156/179 (87.15%), Query Frame = 0 

Query: 59  SKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVFRVLRACSNSGTESFRFFNWA 118
           S+DDYFAAIHHIS+IV+RDFYMERTLNK++IS ++SELV+RVLRACS SGTES RFFNWA
Sbjct: 49  SRDDYFAAIHHISNIVQRDFYMERTLNKMRIS-VDSELVYRVLRACSKSGTESLRFFNWA 108

Query: 119 CTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQN-LKISPETISFIIQEYGKQ 178
            TH+PSY+PTT+E EEL +TLAR KKY +MWK+L QM+T + L +S +T+ FII+EYGKQ
Sbjct: 109 RTHHPSYRPTTVELEELARTLARAKKYESMWKILQQMQTNHGLIVSSDTLCFIIEEYGKQ 168

Query: 179 GLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYALIRRMIRKGVTPDKK 237
           GLVD AV +FN+  K   C QTVE+YN+LLF+LCEVK+FHGAYAL+RRMIRKG+ PDK+
Sbjct: 169 GLVDRAVEVFNRVPKIFRCSQTVELYNSLLFSLCEVKLFHGAYALVRRMIRKGLVPDKR 226

[Close]
BLAST of Cla97C06G118870 vs. TrEMBL
Match: tr|W9RHW0|W9RHW0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024459 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 4.7e-66
Identity = 134/204 (65.69%), Postives = 161/204 (78.92%), Query Frame = 0 

Query: 42  IRHFSTSNSS------WSGSVAP--SKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLN 101
           +R+F T  S+      +  S  P  SKD+YFAAIHHIS+IV+RDFYMERTLNKL+I+ ++
Sbjct: 26  LRYFQTLPSTAVNGDHYQNSTKPSSSKDNYFAAIHHISNIVQRDFYMERTLNKLRIAAVD 85

Query: 102 SELVFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLL 161
           S+LVFRVLRAC   G ES RFFNWA +H PSY+PT++E EEL K LARTKKY +MWK+L 
Sbjct: 86  SDLVFRVLRACHKFGPESLRFFNWARSHQPSYRPTSVELEELAKNLARTKKYESMWKILQ 145

Query: 162 QMKT-QNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCE 221
           QMKT  NL IS ET+ FII+EYGKQGLVD A  +FN+  K  +C QTVEVYN+LLFALCE
Sbjct: 146 QMKTNNNLIISSETLCFIIEEYGKQGLVDQAAEVFNRVPKIFNCSQTVEVYNSLLFALCE 205

Query: 222 VKMFHGAYALIRRMIRKGVTPDKK 237
           VK+FHGAYAL+RRMIRK V PDK+
Sbjct: 206 VKLFHGAYALVRRMIRKEVVPDKR 229

[Close]
BLAST of Cla97C06G118870 vs. Swiss-Prot
Match: sp|Q94JX6|PP391_ARATH (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-58
Identity = 116/195 (59.49%), Postives = 147/195 (75.38%), Query Frame = 0 

Query: 42  IRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVFRVL 101
           IRHF++     S    P+K DYFAAI+H+ +IVRR+ + ER+LN L++  + SE VFRVL
Sbjct: 26  IRHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHPERSLNSLRLP-VTSEFVFRVL 85

Query: 102 RACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLK 161
           RA S S  +S RFFNWA   NPSY PT++E+EEL K+LA  KKY +MWK+L QMK  +L 
Sbjct: 86  RATSRSSNDSLRFFNWA-RSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLD 145

Query: 162 ISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYA 221
           IS ET+ FII++YGK G VD AV +FN   K++ C QTV+VYN+LL ALC+VKMFHGAYA
Sbjct: 146 ISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYA 205

Query: 222 LIRRMIRKGVTPDKK 237
           LIRRMIRKG+ PDK+
Sbjct: 206 LIRRMIRKGLKPDKR 218

[Close]
BLAST of Cla97C06G118870 vs. Swiss-Prot
Match: sp|Q9SS17|RS241_ARATH (40S ribosomal protein S24-1 OS=Arabidopsis thaliana OX=3702 GN=RPS24A PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.0e-07
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 5  FVFKVRSHFGGGKSTRLGLIYDYVENAKKYEPKY 39
          FVFK R+HFGGGKS+  GLIYD VE+AKK+EPKY
Sbjct: 58 FVFKFRTHFGGGKSSGFGLIYDTVESAKKFEPKY 91

[Close]
BLAST of Cla97C06G118870 vs. Swiss-Prot
Match: sp|Q8LC83|RS242_ARATH (40S ribosomal protein S24-2 OS=Arabidopsis thaliana OX=3702 GN=RPS24B PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-07
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 5  FVFKVRSHFGGGKSTRLGLIYDYVENAKKYEPKY 39
          F FK R+HFGGGKS+  GLIYD VENAKK+EPKY
Sbjct: 58 FCFKFRTHFGGGKSSGYGLIYDTVENAKKFEPKY 91

[Close]
BLAST of Cla97C06G118870 vs. Swiss-Prot
Match: sp|Q9FNG8|PP366_ARATH (Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g06400 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.4e-06
Identity = 40/150 (26.67%), Postives = 65/150 (43.33%), Query Frame = 0 

Query: 67  IHHISHIVRRDFYMERTLNKLQIS--YLNSELVFRVLRACSNSGTESFRFFNWACTHNPS 126
           +  I  ++      ERT   L+ S      ELV  VLR     G    RFF+W    N  
Sbjct: 615 VQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRN-G 674

Query: 127 YKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAV 186
           YK  +  +   +K     K +  M  +  +M+ Q   I+ +T + +I +YG+ GL + A+
Sbjct: 675 YKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAI 734

Query: 187 TIFNQCSKSIDCPQTVEVYNALLFALCEVK 215
             F +  K +    +   +  L+  LCE K
Sbjct: 735 RTFKE-MKDMGLIPSSSTFKCLITVLCEKK 762

[Close]
BLAST of Cla97C06G118870 vs. Swiss-Prot
Match: sp|Q75K27|RS24_DICDI (40S ribosomal protein S24 OS=Dictyostelium discoideum OX=44689 GN=rps24 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.8e-05
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 5  FVFKVRSHFGGGKSTRLGLIYDYVENAKKYEPKY 39
          F+F  ++ FGGGKST  GLIYD +E AKKYEPKY
Sbjct: 58 FLFGFKTDFGGGKSTGFGLIYDNLEIAKKYEPKY 91

[Close]
BLAST of Cla97C06G118870 vs. TAIR10
Match: AT5G18390.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-59
Identity = 116/195 (59.49%), Postives = 147/195 (75.38%), Query Frame = 0 

Query: 42  IRHFSTSNSSWSGSVAPSKDDYFAAIHHISHIVRRDFYMERTLNKLQISYLNSELVFRVL 101
           IRHF++     S    P+K DYFAAI+H+ +IVRR+ + ER+LN L++  + SE VFRVL
Sbjct: 26  IRHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREIHPERSLNSLRLP-VTSEFVFRVL 85

Query: 102 RACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLK 161
           RA S S  +S RFFNWA   NPSY PT++E+EEL K+LA  KKY +MWK+L QMK  +L 
Sbjct: 86  RATSRSSNDSLRFFNWA-RSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLD 145

Query: 162 ISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALCEVKMFHGAYA 221
           IS ET+ FII++YGK G VD AV +FN   K++ C QTV+VYN+LL ALC+VKMFHGAYA
Sbjct: 146 ISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYA 205

Query: 222 LIRRMIRKGVTPDKK 237
           LIRRMIRKG+ PDK+
Sbjct: 206 LIRRMIRKGLKPDKR 218

[Close]
BLAST of Cla97C06G118870 vs. TAIR10
Match: AT3G04920.1 (Ribosomal protein S24e family protein)

HSP 1 Score: 59.7 bits (143), Expect = 5.7e-09
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 5  FVFKVRSHFGGGKSTRLGLIYDYVENAKKYEPKY 39
          FVFK R+HFGGGKS+  GLIYD VE+AKK+EPKY
Sbjct: 58 FVFKFRTHFGGGKSSGFGLIYDTVESAKKFEPKY 91

[Close]
BLAST of Cla97C06G118870 vs. TAIR10
Match: AT5G28060.1 (Ribosomal protein S24e family protein)

HSP 1 Score: 59.3 bits (142), Expect = 7.4e-09
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 5  FVFKVRSHFGGGKSTRLGLIYDYVENAKKYEPKY 39
          F FK R+HFGGGKS+  GLIYD VENAKK+EPKY
Sbjct: 58 FCFKFRTHFGGGKSSGYGLIYDTVENAKKFEPKY 91

[Close]
BLAST of Cla97C06G118870 vs. TAIR10
Match: AT5G06400.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 53.5 bits (127), Expect = 4.1e-07
Identity = 40/150 (26.67%), Postives = 65/150 (43.33%), Query Frame = 0 

Query: 67  IHHISHIVRRDFYMERTLNKLQIS--YLNSELVFRVLRACSNSGTESFRFFNWACTHNPS 126
           +  I  ++      ERT   L+ S      ELV  VLR     G    RFF+W    N  
Sbjct: 615 VQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRN-G 674

Query: 127 YKPTTLEFEELVKTLARTKKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAV 186
           YK  +  +   +K     K +  M  +  +M+ Q   I+ +T + +I +YG+ GL + A+
Sbjct: 675 YKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAI 734

Query: 187 TIFNQCSKSIDCPQTVEVYNALLFALCEVK 215
             F +  K +    +   +  L+  LCE K
Sbjct: 735 RTFKE-MKDMGLIPSSSTFKCLITVLCEKK 762

[Close]
BLAST of Cla97C06G118870 vs. TAIR10
Match: AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 49.7 bits (117), Expect = 5.9e-06
Identity = 28/125 (22.40%), Postives = 63/125 (50.40%), Query Frame = 0 

Query: 92  LNSELVFRVLRACSNSGTESFRFFNWACTHNPSYKPTTLEFEELVKTLARTKKYTTMWKV 151
           L+ + V ++L++  N    +F  F+ + T +P Y  + + +  +++ L+ T+    + ++
Sbjct: 8   LSPKHVLKLLKSEKNP-RAAFALFD-SATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 67

Query: 152 LLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALC 211
           +  +++Q  K   +    +I+ YGK  + D A+ +F +  +   C   +  YN LL A  
Sbjct: 68  VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 127

Query: 212 EVKMF 217
           E K +
Sbjct: 128 EAKQW 130

The following BLAST results are available for this feature:
BLAST of Cla97C06G118870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142520.18.9e-10193.50PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial ... [more]
XP_008462724.12.6e-10093.47PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial ... [more]
XP_022960812.15.4e-9891.92pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita ... [more]
XP_022988097.15.4e-9891.92pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita ... [more]
XP_023516681.13.9e-9690.91pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita ... [more]
BLAST of Cla97C06G118870 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M105|A0A0A0M105_CUCSA5.9e-10193.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695420 PE=4 SV=1[more]
tr|A0A1S3CJ74|A0A1S3CJ74_CUCME1.7e-10093.47pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Cucumis ... [more]
tr|M5WME7|M5WME7_PRUPE3.6e-6663.24Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G355300 PE=4 SV=1[more]
tr|A0A2P5BB16|A0A2P5BB16_PARAD3.6e-6670.95Tetratricopeptide-like helical domain containing protein OS=Parasponia andersoni... [more]
tr|W9RHW0|W9RHW0_9ROSA4.7e-6665.69Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_024459 PE=4 SV=1[more]
BLAST of Cla97C06G118870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94JX6|PP391_ARATH2.2e-5859.49Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidop... [more]
sp|Q9SS17|RS241_ARATH1.0e-0776.4740S ribosomal protein S24-1 OS=Arabidopsis thaliana OX=3702 GN=RPS24A PE=2 SV=1[more]
sp|Q8LC83|RS242_ARATH1.3e-0776.4740S ribosomal protein S24-2 OS=Arabidopsis thaliana OX=3702 GN=RPS24B PE=2 SV=2[more]
sp|Q9FNG8|PP366_ARATH7.4e-0626.67Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS... [more]
sp|Q75K27|RS24_DICDI2.8e-0567.6540S ribosomal protein S24 OS=Dictyostelium discoideum OX=44689 GN=rps24 PE=3 SV=... [more]
BLAST of Cla97C06G118870 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18390.11.2e-5959.49Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G04920.15.7e-0976.47Ribosomal protein S24e family protein[more]
AT5G28060.17.4e-0976.47Ribosomal protein S24e family protein[more]
AT5G06400.14.1e-0726.67Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G09060.15.9e-0622.40Pentatricopeptide repeat (PPR) superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR012678Ribosomal_L23/L15e_core_dom_sf
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR001976Ribosomal_S24e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005622 intracellular
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G118870.1Cla97C06G118870.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 460..477
NoneNo IPR availableGENE3DG3DSA:3.30.70.3370coord: 1..54
e-value: 7.0E-12
score: 47.2
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 39..468
NoneNo IPR availablePANTHERPTHR24015:SF503SUBFAMILY NOT NAMEDcoord: 39..468
IPR001976Ribosomal protein S24ePFAMPF01282Ribosomal_S24ecoord: 5..40
e-value: 1.9E-10
score: 40.5
IPR001976Ribosomal protein S24ePRODOMPD006052coord: 5..33
e-value: 2.0E-5
score: 119.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 369..474
e-value: 1.2E-16
score: 63.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 228..295
e-value: 5.0E-13
score: 50.9
coord: 66..227
e-value: 9.6E-14
score: 53.3
coord: 296..368
e-value: 9.4E-16
score: 59.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 200..247
e-value: 4.2E-10
score: 39.5
coord: 303..349
e-value: 4.4E-8
score: 33.1
coord: 381..420
e-value: 3.0E-9
score: 36.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 276..305
e-value: 3.2E-4
score: 18.7
coord: 237..268
e-value: 1.3E-4
score: 19.9
coord: 307..340
e-value: 5.8E-5
score: 21.0
coord: 202..234
e-value: 3.8E-6
score: 24.7
coord: 412..443
e-value: 3.7E-4
score: 18.5
coord: 378..409
e-value: 3.2E-7
score: 28.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 276..301
e-value: 0.49
score: 10.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 269..303
score: 7.87
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 234..268
score: 12.693
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 304..338
score: 10.205
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..162
score: 6.303
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 6.588
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 374..408
score: 10.589
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 339..373
score: 9.602
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 409..443
score: 10.073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 199..233
score: 10.841
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILYSSF54189Ribosomal proteins S24e, L23 and L15ecoord: 5..40

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G118870Cla003767Watermelon (97103) v1wmwmbB412
Cla97C06G118870Csa1G695420Cucumber (Chinese Long) v2cuwmbB082
Cla97C06G118870MELO3C024683Melon (DHL92) v3.5.1mewmbB266
Cla97C06G118870ClCG06G009060Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G118870CSPI01G33810Wild cucumber (PI 183967)cpiwmbB083
Cla97C06G118870Cucsa.332330Cucumber (Gy14) v1cgywmbB576
Cla97C06G118870CmaCh10G010250Cucurbita maxima (Rimu)cmawmbB083
Cla97C06G118870CmoCh10G010830Cucurbita moschata (Rifu)cmowmbB072
Cla97C06G118870Lsi06G008100Bottle gourd (USVL1VR-Ls)lsiwmbB378
Cla97C06G118870CsGy1G032370Cucumber (Gy14) v2cgybwmbB079
Cla97C06G118870MELO3C024683.2Melon (DHL92) v3.6.1medwmbB252
Cla97C06G118870CsaV3_1G045690Cucumber (Chinese Long) v3cucwmbB079
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G118870Silver-seed gourdcarwmbB0958
Cla97C06G118870Cucurbita maxima (Rimu)cmawmbB142
Cla97C06G118870Cucurbita moschata (Rifu)cmowmbB125
Cla97C06G118870Melon (DHL92) v3.5.1mewmbB262
Cla97C06G118870Watermelon (97103) v1wmwmbB406
Cla97C06G118870Wax gourdwgowmbB651
Cla97C06G118870Wax gourdwgowmbB661