Lsi06G004300 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G004300
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_7
Location	chr06 : 4716699 .. 4718490 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGAACCCCAAAAATCAGTGAAATGTTGCAAAAAGACCCCACAAACTTTCCGCCTTCTCCTTTCCCTTCCACTTCCATTTCCATGGCAGCAGTCCAGAGAGAAAACGAGACATACCGAGAAAGAATGTCGAGATTGGAATGGAGTAAAGCAAGGAAGAAGATGATCGAAGAACAGGCAAAGGCCGAATTAGAATCTCTCCAACTTCTCTACCCGAATCGTTTCGAATACCTAAAACTCGAGCTCAAATCCTTCATCCATCTTCTTCAATCGCAATCGGAAGAGTCTTTTCCTCAGCCGAACCCTAACTTAGCCTCTAAACGCTCTCCGTCGCCGTCCTATTTCGCTCCTGATTCGCAAGGTCAGTATAGCGAAATAGCAATAATCAATAATATCCTCTTCTTTCTTCTTCTTGTTTACTGATTCATGTGTAAGAGCAGAATCGAGTAGTTGTAGAAAGAGGAAGAAGATGGAGGAAGGAAGAAACGGATTACAGAGAGAGGCTGCTGAATCTGAATCGAAGATTGGACGGCGGAAGGATAGAGTAGATGTAGTTCTGGAAAGAGCCGCCGTTTGTCTCTGCAAGATTCAACGGTTCAAAACGGCTCTGTTTTCCTCCGCCGGTTGACGACGGCGCTCCGTCTTCTTGACGCCTCGAAGGTGCTGCTCCGATCTTTCTCTTTCTTTATTCCCTTTCCTATGCAATGAAATTGCTGCACGTGTGTGAAAATTCTTCGGATTCGGTGGGGATTAACTTAACAAATTTTGTGGGGCGTGTGTGTGAAATCGTTCCTATTTTACGGTCCAATTTTGCGGTAAAAGGAAAAAAAAAATCACTTTTGTATTTGAATGTAATAGAGTAGGAGCGCTTTGATCTCGACAATTTTGTTTATAAATATTTTATTTTATATTTTATTAGGCGATGATTTTAAATTTTCATCAACATTTTTACATTTTCGTTTTAATATTGATATGGGGTGAATTGACATTTACATTTAAAAAAAAAAGAATTGTGAAACATAAAAAATAAATAATAAAATATCTCTAATATGAATATAAGATACATTATAGATTTTGACTTATTTAAAAAGCATAGAATGTTTATTATAGTATAGTAGAAATAGGGAAATTCAAAGCATATACCTTTTAAATATTTTGGGGTGAAATGATACAAAAATAAACATCGGTCTATCGTCGTCTATTACTAATAATAGAGTGACATTTTGCTACTTTAAAATATTTTGGAGAATTGGTATTGATTGGCCCCTATTTAAGGTCCCACTTGAAATTTGGTCTTTTGTTGATGTCATCACACGGTGAATTTACCACTTTAACCATTTTTCCTTCTTTCTTTTCCTTCTCTTTTTTGCAATTTCTTCTTCTTTTTTTTTTTTATTATTTTTTTTTTATTTTCGACGATGTCTTCTGTTTATGTCGCCCTCTTTTTTTTTTCGTTTTTCCAGCGAGATTTCCTTCTCGCCCTCTTGTTTTTTCGAATCAAAGATGTAAGTTGGAGCGTGAATCAGAACGAGAGGAAGAAGCGAGTGTGAGACCAATAAATAAGAGGAAGAAGCAAGAGTGAGAATTCGAACGAAGGAAAAAATTACGAAATTGACAAGGAAGAATTCAAACGAATGAAAAAAGGAAGGAGAACAATGTGAATCGAAGAACGAGATGAAGGAATGAGAAATCTGGGTTGTGTCCGACCTCACGCGTGTTTTAGAGTCAAAATGGTACGTTTATATGCGACTGGCGTAAGCGAAAGGCCAAATTTTGAGCGTTTTTAAAGTGAG

mRNA sequence

CGAGAACCCCAAAAATCAGTGAAATGTTGCAAAAAGACCCCACAAACTTTCCGCCTTCTCCTTTCCCTTCCACTTCCATTTCCATGGCAGCAGTCCAGAGAGAAAACGAGACATACCGAGAAAGAATGTCGAGATTGGAATGGAGTAAAGCAAGGAAGAAGATGATCGAAGAACAGGCAAAGGCCGAATTAGAATCTCTCCAACTTCTCTACCCGAATCGTTTCGAATACCTAAAACTCGAGCTCAAATCCTTCATCCATCTTCTTCAATCGCAATCGGAAGAGTCTTTTCCTCAGCCGAACCCTAACTTAGCCTCTAAACGCTCTCCGTCGCCGTCCTATTTCGCTCCTGATTCGCAAGAATCGAGTAGTTGTAGAAAGAGGAAGAAGATGGAGGAAGGAAGAAACGGATTACAGAGAGAGGCTGCTGAATCTGAATCGAAGATTGGACGGCGGAAGGATAGAGTAGATGTAGTTCTGGAAAGAGCCGCCGTTTGTCTCTGCAAGATTCAACGGTTCAAAACGGCTCTGTTTTCCTCCGCCGGTTGACGACGGCGCTCCGTCTTCTTGACGCCTCGAAGCGAGATTTCCTTCTCGCCCTCTTGTTTTTTCGAATCAAAGATGTAAGTTGGAGCGTGAATCAGAACGAGAGGAAGAAGCGAGTGTGAGACCAATAAATAAGAGGAAGAAGCAAGAGTGAGAATTCGAACGAAGGAAAAAATTACGAAATTGACAAGGAAGAATTCAAACGAATGAAAAAAGGAAGGAGAACAATGTGAATCGAAGAACGAGATGAAGGAATGAGAAATCTGGGTTGTGTCCGACCTCACGCGTGTTTTAGAGTCAAAATGGTACGTTTATATGCGACTGGCGTAAGCGAAAGGCCAAATTTTGAGCGTTTTTAAAGTGAG

Coding sequence (CDS)

ATGTTGCAAAAAGACCCCACAAACTTTCCGCCTTCTCCTTTCCCTTCCACTTCCATTTCCATGGCAGCAGTCCAGAGAGAAAACGAGACATACCGAGAAAGAATGTCGAGATTGGAATGGAGTAAAGCAAGGAAGAAGATGATCGAAGAACAGGCAAAGGCCGAATTAGAATCTCTCCAACTTCTCTACCCGAATCGTTTCGAATACCTAAAACTCGAGCTCAAATCCTTCATCCATCTTCTTCAATCGCAATCGGAAGAGTCTTTTCCTCAGCCGAACCCTAACTTAGCCTCTAAACGCTCTCCGTCGCCGTCCTATTTCGCTCCTGATTCGCAAGAATCGAGTAGTTGTAGAAAGAGGAAGAAGATGGAGGAAGGAAGAAACGGATTACAGAGAGAGGCTGCTGAATCTGAATCGAAGATTGGACGGCGGAAGGATAGAGTAGATGTAGTTCTGGAAAGAGCCGCCGTTTGTCTCTGCAAGATTCAACGGTTCAAAACGGCTCTGTTTTCCTCCGCCGGTTGA

Protein sequence

MLQKDPTNFPPSPFPSTSISMAAVQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKMEEGRNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG

Homology

[Close]

BLAST of Lsi06G004300 vs. TrEMBL
Match: A0A0A0LX97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600880 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-53
Identity = 122/159 (76.73%), Postives = 133/159 (83.65%), Query Frame = 1


Query: 24  VQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQS 83
           V+  NETY E++S LEWSKARK MIEEQA AEL+SLQLLYPNRFEYLKLELKSFIHLLQS
Sbjct: 7   VKNHNETYTEKISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSFIHLLQS 66

Query: 84  QSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKMEE----GRNGLQREAA---- 143
           Q E  FPQPN NL S RSPSPS F PD+QESSSCRKR+K+ E    GRNGLQ+E A    
Sbjct: 67  QPEHPFPQPNTNLTSNRSPSPSSFGPDTQESSSCRKRRKVAEGRNNGRNGLQKEVAEYEY 126

Query: 144 ESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG 175
           ESE+K+GR KDRVDVVLERAAVCLCKI+RFK ALFSSAG
Sbjct: 127 ESETKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 165

[Close]

BLAST of Lsi06G004300 vs. TrEMBL
Match: M1BI59_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017740 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.5e-12
Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 1


Query: 50  EQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAP 109
           E+AK ELE L+  +PN+FEYLKLEL+SFI  L+S   ++             PS SY   
Sbjct: 2   EEAKKELEILETQHPNKFEYLKLELRSFISFLESHYSDTL------------PSSSYV-- 61

Query: 110 DSQESSSCRKRK-----KMEEGRNGLQREAAESESKIG-RRKDRVDVVLERAAVCLCKIQ 169
           D+QESSS RKRK       E+ +  LQR   ++   +G R++ R+DVV+ERA  CL KIQ
Sbjct: 62  DTQESSSNRKRKNGSFGSKEQPKKKLQRVGQDT---VGCRKRSRIDVVMERAQACLRKIQ 109

[Close]

BLAST of Lsi06G004300 vs. TrEMBL
Match: K4BA24_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-11
Identity = 58/125 (46.40%), Postives = 75/125 (60.00%), Query Frame = 1


Query: 50  EQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAP 109
           E+AK ELE L+  +PN+FEYLKLEL+SFI  L+S    +             PS SY   
Sbjct: 2   EEAKKELEILETQHPNKFEYLKLELRSFISFLESHYSHTL------------PSSSYV-- 61

Query: 110 DSQESSSCRKRK-----KMEEGRNGLQREAAESESKIG-RRKDRVDVVLERAAVCLCKIQ 169
           D+QESSS RKRK       EE +  LQR   ++   +G  ++ R+DVV+ERA  CL KIQ
Sbjct: 62  DTQESSSNRKRKNGSFASKEEPKKKLQRVGQDT---VGCNKRSRIDVVMERAQACLRKIQ 109

[Close]

BLAST of Lsi06G004300 vs. TrEMBL
Match: A0A072UYA4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g063340 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-10
Identity = 56/138 (40.58%), Postives = 77/138 (55.80%), Query Frame = 1


Query: 50  EQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPN------LASKRSPS 109
           EQAK ELE L+ LYPN+ +YLK EL+SFI  LQ+    S P P  N      L ++ S S
Sbjct: 4   EQAKEELEMLETLYPNQHDYLKHELRSFISHLQNSYSYSHPLPQNNTSLTAFLDTEESTS 63

Query: 110 PSYFAPDSQESSSCRKRKKMEEGRNGLQREAAESESKI----------GRRKDRVDVVLE 169
             +    S + +   + + M+EG+ G +    ES   +           +RKDRVD+VLE
Sbjct: 64  LEHI--KSIQLALPEREEVMKEGKKGAENSELESPKSVVIKHCPSRRKNKRKDRVDLVLE 123

Query: 170 RAAVCLCKIQRFKTALFS 172
           +A  CL KI+ FKT+LFS
Sbjct: 124 KAQNCLKKIRHFKTSLFS 139

[Close]

BLAST of Lsi06G004300 vs. TrEMBL
Match: A0A151SZF8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_015569 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.0e-09
Identity = 58/146 (39.73%), Postives = 77/146 (52.74%), Query Frame = 1


Query: 47  MIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSY 106
           M+EEQAK EL+ L+  YPN+ E+LK EL+S I  LQS+ ++S P P  N         + 
Sbjct: 1   MMEEQAKEELKMLEAQYPNQHEFLKHELRSLIFQLQSKHQDSEPLPENNHC-------NL 60

Query: 107 FAPDSQESSSCRKRKKMEEG----------RNGLQREAAESE-----------SKIGRRK 166
              D+QES+S  + K    G           +G   E +E E           S+  +RK
Sbjct: 61  AFRDTQESTSLEQGKSSSHGSELGLAERVVTDGKVDENSELETPKIDVMKHFSSRKNKRK 120

Query: 167 DRVDVVLERAAVCLCKIQRFKTALFS 172
           DRVD+VLERA VCL KI+  K  LFS
Sbjct: 121 DRVDLVLERAQVCLKKIKHLKIFLFS 139

[Close]

BLAST of Lsi06G004300 vs. TAIR10
Match: AT5G36960.1 (AT5G36960.1 unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-08
Identity = 57/145 (39.31%), Postives = 80/145 (55.17%), Query Frame = 1


Query: 41  SKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKR 100
           S + +  + E AK ELE LQ  YPNRF YLK +L+SFI  L+   E+  P   P L    
Sbjct: 4   SSSWEMQLVETAKEELEILQSQYPNRFAYLKSDLQSFISHLR---EDHAP---PRL---- 63

Query: 101 SPSPSYFAPDSQESSSC---RKRKKMEEGRNGLQREAAES--------ESKIGRR----- 160
             SPS     +QESS+C   +K KK +   + L  +A+ S         +K+G+R     
Sbjct: 64  --SPSSSVVLTQESSNCNYKQKHKKRKCVMDNLGDQASSSTTGKIHKNNNKMGQRVVTKK 123

Query: 161 KDRVDVVLERAAVCLCKIQRFKTAL 170
           K+RV++VLERA +CL KI+  K +L
Sbjct: 124 KNRVEMVLERAQLCLQKIRDVKASL 136

[Close]

BLAST of Lsi06G004300 vs. NCBI nr
Match: gi|659100386|ref|XP_008451071.1| (PREDICTED: uncharacterized protein LOC103492458 [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 144/183 (78.69%), Postives = 151/183 (82.51%), Query Frame = 1


Query: 1   MLQKDPTNFPPSPFP--STSISMAAVQRE---NETYRERMSRLEWSKARKKMIEEQAKAE 60
           MLQKDPTNFP S FP  ST ISMA  Q E   NETY ER+S LEWSKARK MIEEQA  E
Sbjct: 1   MLQKDPTNFPSSSFPLSSTFISMAEFQGEKNHNETYTERISSLEWSKARKTMIEEQANVE 60

Query: 61  LESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAPDSQESS 120
           L+SLQLLYPNRFEYLKLELKSFIHLLQSQSE  FPQPN  L S RSPSP  F PD+QESS
Sbjct: 61  LQSLQLLYPNRFEYLKLELKSFIHLLQSQSEHPFPQPNTILTSNRSPSPFSFGPDTQESS 120

Query: 121 SCRKRKKMEEG----RNGLQREAAESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFS 175
           SCRKR+K+EEG    RNGLQRE AESESKIGRRKDRV+VVLERAAVCLCKI+RFK ALFS
Sbjct: 121 SCRKRRKVEEGRNSRRNGLQREVAESESKIGRRKDRVEVVLERAAVCLCKIRRFKMALFS 180

[Close]

BLAST of Lsi06G004300 vs. NCBI nr
Match: gi|449452807|ref|XP_004144150.1| (PREDICTED: uncharacterized protein LOC101216009 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 2.2e-53
Identity = 122/159 (76.73%), Postives = 133/159 (83.65%), Query Frame = 1


Query: 24  VQRENETYRERMSRLEWSKARKKMIEEQAKAELESLQLLYPNRFEYLKLELKSFIHLLQS 83
           V+  NETY E++S LEWSKARK MIEEQA AEL+SLQLLYPNRFEYLKLELKSFIHLLQS
Sbjct: 7   VKNHNETYTEKISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSFIHLLQS 66

Query: 84  QSEESFPQPNPNLASKRSPSPSYFAPDSQESSSCRKRKKMEE----GRNGLQREAA---- 143
           Q E  FPQPN NL S RSPSPS F PD+QESSSCRKR+K+ E    GRNGLQ+E A    
Sbjct: 67  QPEHPFPQPNTNLTSNRSPSPSSFGPDTQESSSCRKRRKVAEGRNNGRNGLQKEVAEYEY 126

Query: 144 ESESKIGRRKDRVDVVLERAAVCLCKIQRFKTALFSSAG 175
           ESE+K+GR KDRVDVVLERAAVCLCKI+RFK ALFSSAG
Sbjct: 127 ESETKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSAG 165

[Close]

BLAST of Lsi06G004300 vs. NCBI nr
Match: gi|970009394|ref|XP_015065576.1| (PREDICTED: uncharacterized protein LOC107010819 [Solanum pennellii])

HSP 1 Score: 79.3 bits (194), Expect = 7.2e-12
Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 1


Query: 50  EQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAP 109
           E+AK ELE L+  +PN+FEYLKLEL+SFI  L+S + ++             PS SY   
Sbjct: 2   EEAKKELEILETQHPNKFEYLKLELRSFISFLESHNSDTL------------PSSSYV-- 61

Query: 110 DSQESSSCRKRK-----KMEEGRNGLQREAAESESKIG-RRKDRVDVVLERAAVCLCKIQ 169
           D+QESSS RKRK       EE +  LQR   ++   +G  ++ R+DVV+ERA  CL KIQ
Sbjct: 62  DTQESSSNRKRKNGSFASKEEPKKKLQRVGQDT---VGCNKRSRIDVVMERAQACLRKIQ 109

[Close]

BLAST of Lsi06G004300 vs. NCBI nr
Match: gi|565395156|ref|XP_006363211.1| (PREDICTED: uncharacterized protein LOC102581035 [Solanum tuberosum])

HSP 1 Score: 79.0 bits (193), Expect = 9.4e-12
Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = 1


Query: 50  EQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAP 109
           E+AK ELE L+  +PN+FEYLKLEL+SFI  L+S   ++             PS SY   
Sbjct: 2   EEAKKELEILETQHPNKFEYLKLELRSFISFLESHYSDTL------------PSSSYV-- 61

Query: 110 DSQESSSCRKRK-----KMEEGRNGLQREAAESESKIG-RRKDRVDVVLERAAVCLCKIQ 169
           D+QESSS RKRK       E+ +  LQR   ++   +G R++ R+DVV+ERA  CL KIQ
Sbjct: 62  DTQESSSNRKRKNGSFGSKEQPKKKLQRVGQDT---VGCRKRSRIDVVMERAQACLRKIQ 109

[Close]

BLAST of Lsi06G004300 vs. NCBI nr
Match: gi|723673587|ref|XP_010316536.1| (PREDICTED: uncharacterized protein LOC104645784 [Solanum lycopersicum])

HSP 1 Score: 77.4 bits (189), Expect = 2.7e-11
Identity = 58/125 (46.40%), Postives = 75/125 (60.00%), Query Frame = 1


Query: 50  EQAKAELESLQLLYPNRFEYLKLELKSFIHLLQSQSEESFPQPNPNLASKRSPSPSYFAP 109
           E+AK ELE L+  +PN+FEYLKLEL+SFI  L+S    +             PS SY   
Sbjct: 2   EEAKKELEILETQHPNKFEYLKLELRSFISFLESHYSHTL------------PSSSYV-- 61

Query: 110 DSQESSSCRKRK-----KMEEGRNGLQREAAESESKIG-RRKDRVDVVLERAAVCLCKIQ 169
           D+QESSS RKRK       EE +  LQR   ++   +G  ++ R+DVV+ERA  CL KIQ
Sbjct: 62  DTQESSSNRKRKNGSFASKEEPKKKLQRVGQDT---VGCNKRSRIDVVMERAQACLRKIQ 109

The following BLAST results are available for this feature:

BLAST of Lsi06G004300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G004300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX97_CUCSA	1.5e-53	76.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600880 PE=4 SV=1	[more]
M1BI59_SOLTU	6.5e-12	46.40	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017740 PE=4 SV=1	[more]
K4BA24_SOLLC	1.9e-11	46.40	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A072UYA4_MEDTR	2.7e-10	40.58	Uncharacterized protein OS=Medicago truncatula GN=MTR_3g063340 PE=4 SV=1	[more]
A0A151SZF8_CAJCA	3.0e-09	39.73	Uncharacterized protein OS=Cajanus cajan GN=KK1_015569 PE=4 SV=1	[more]

BLAST of Lsi06G004300 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G36960.1	3.0e-08	39.31	unknown protein	[more]

BLAST of Lsi06G004300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100386\|ref\|XP_008451071.1\|	3.1e-63	78.69	PREDICTED: uncharacterized protein LOC103492458 [Cucumis melo]	[more]
gi\|449452807\|ref\|XP_004144150.1\|	2.2e-53	76.73	PREDICTED: uncharacterized protein LOC101216009 [Cucumis sativus]	[more]
gi\|970009394\|ref\|XP_015065576.1\|	7.2e-12	46.40	PREDICTED: uncharacterized protein LOC107010819 [Solanum pennellii]	[more]
gi\|565395156\|ref\|XP_006363211.1\|	9.4e-12	46.40	PREDICTED: uncharacterized protein LOC102581035 [Solanum tuberosum]	[more]
gi\|723673587\|ref\|XP_010316536.1\|	2.7e-11	46.40	PREDICTED: uncharacterized protein LOC104645784 [Solanum lycopersicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G004300.1	Lsi06G004300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 21..41 score: -coord: 120..140 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G004300	Csa1G600880	Cucumber (Chinese Long) v2	culsiB058
Lsi06G004300	CSPI01G29580	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G004300	Cucsa.142620	Cucumber (Gy14) v1	cgylsiB230
Lsi06G004300	CmaCh11G008070	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G004300	CmoCh11G008100	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G004300	Cla011079	Watermelon (97103) v1	lsiwmB396
Lsi06G004300	MELO3C015616	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G004300	ClCG03G014230	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G004300	MELO3C015616.2	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G004300	Cla97C03G064420	Watermelon (97103) v2	lsiwmbB365
Lsi06G004300	Bhi02G001391	Wax gourd	lsiwgoB504
Lsi06G004300	Cp4.1LG04g11550	Cucurbita pepo (Zucchini)	cpelsiB563
Lsi06G004300	CsGy1G028890	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G004300	Carg18014	Silver-seed gourd	carlsiB155
Lsi06G004300	CsaV3_1G042000	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G004300	Cucurbita maxima (Rimu)	cmalsiB073
Lsi06G004300	Cucurbita moschata (Rifu)	cmolsiB059
Lsi06G004300	Cucurbita pepo (Zucchini)	cpelsiB299
Lsi06G004300	Silver-seed gourd	carlsiB021