Carg18014 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGGTCAGTGCCCGCTCTGCTGTCCTTTCCATCTCTTCTTCTTCTTCTTCTTCTTCTTTTCCGATTGTTTACTGATTCATGTGTTTTGTAGCAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA RENEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFHQPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALISTAD
BLAST of Carg18014 vs. NCBI nr
Match: XP_022933880.1 (uncharacterized protein LOC111441161 isoform X2 [Cucurbita moschata]) HSP 1 Score: 280.4 bits (716), Expect = 3.8e-72 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of Carg18014 vs. NCBI nr
Match: XP_022933879.1 (uncharacterized protein LOC111441161 isoform X1 [Cucurbita moschata]) HSP 1 Score: 275.8 bits (704), Expect = 9.3e-71 Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Carg18014 vs. NCBI nr
Match: XP_023531053.1 (uncharacterized protein LOC111793421 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 272.7 bits (696), Expect = 7.9e-70 Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0
BLAST of Carg18014 vs. NCBI nr
Match: XP_022968454.1 (uncharacterized protein LOC111467682 isoform X2 [Cucurbita maxima]) HSP 1 Score: 257.3 bits (656), Expect = 3.4e-65 Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 0
BLAST of Carg18014 vs. NCBI nr
Match: XP_022968438.1 (uncharacterized protein LOC111467682 isoform X1 [Cucurbita maxima] >XP_022968446.1 uncharacterized protein LOC111467682 isoform X1 [Cucurbita maxima]) HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64 Identity = 142/151 (94.04%), Postives = 145/151 (96.03%), Query Frame = 0
BLAST of Carg18014 vs. TAIR10
Match: AT5G36960.1 (unknown protein) HSP 1 Score: 54.7 bits (130), Expect = 6.1e-08 Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 0
BLAST of Carg18014 vs. TrEMBL
Match: tr|A0A1S3BRF0|A0A1S3BRF0_CUCME (uncharacterized protein LOC103492458 OS=Cucumis melo OX=3656 GN=LOC103492458 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.4e-38 Identity = 104/157 (66.24%), Postives = 121/157 (77.07%), Query Frame = 0
BLAST of Carg18014 vs. TrEMBL
Match: tr|A0A0A0LX97|A0A0A0LX97_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600880 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35 Identity = 101/160 (63.12%), Postives = 120/160 (75.00%), Query Frame = 0
BLAST of Carg18014 vs. TrEMBL
Match: tr|M1BI59|M1BI59_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102581035 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11 Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 0
BLAST of Carg18014 vs. TrEMBL
Match: tr|A0A1U8FX04|A0A1U8FX04_CAPAN (uncharacterized protein LOC107859672 OS=Capsicum annuum OX=4072 GN=LOC107859672 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10 Identity = 53/130 (40.77%), Postives = 73/130 (56.15%), Query Frame = 0
BLAST of Carg18014 vs. TrEMBL
Match: tr|K4BA24|K4BA24_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=104645784 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.7e-10 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|