Carg18014 (gene) Silver-seed gourd

NameCarg18014
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionBnaCnng25330D protein
LocationCucurbita_argyrosperma_scaffold_171 : 403946 .. 404519 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGGTCAGTGCCCGCTCTGCTGTCCTTTCCATCTCTTCTTCTTCTTCTTCTTCTTCTTTTCCGATTGTTTACTGATTCATGTGTTTTGTAGCAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA

mRNA sequence

AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA

Coding sequence (CDS)

AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA

Protein sequence

RENEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFHQPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALISTAD
BLAST of Carg18014 vs. NCBI nr
Match: XP_022933880.1 (uncharacterized protein LOC111441161 isoform X2 [Cucurbita moschata])

HSP 1 Score: 280.4 bits (716), Expect = 3.8e-72
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0

Query: 10  MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
           MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH
Sbjct: 1   MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 60

Query: 70  QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 129
           QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR
Sbjct: 61  QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 120

Query: 130 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
           RRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 151

BLAST of Carg18014 vs. NCBI nr
Match: XP_022933879.1 (uncharacterized protein LOC111441161 isoform X1 [Cucurbita moschata])

HSP 1 Score: 275.8 bits (704), Expect = 9.3e-71
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0

Query: 10  MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
           MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH
Sbjct: 1   MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 60

Query: 70  QPNTVEASRRRSPSTLAPDSQ-ESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 129
           QPNTVEASRRRSPSTLAPDSQ ESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG
Sbjct: 61  QPNTVEASRRRSPSTLAPDSQAESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 120

Query: 130 RRRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
           RRRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 RRRDRVDVVLERAVVCLRKIQRFKTALISTAD 152

BLAST of Carg18014 vs. NCBI nr
Match: XP_023531053.1 (uncharacterized protein LOC111793421 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.7 bits (696), Expect = 7.9e-70
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0

Query: 10  MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
           M DLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQS+SEELFH
Sbjct: 1   MTDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSQSEELFH 60

Query: 70  QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 129
           QPNTVEASRRRSPS+LAPDSQESSSCRKRRK EEGGQMKVYGNGLRREIAESETGDKNGR
Sbjct: 61  QPNTVEASRRRSPSSLAPDSQESSSCRKRRKTEEGGQMKVYGNGLRREIAESETGDKNGR 120

Query: 130 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
           RRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 151

BLAST of Carg18014 vs. NCBI nr
Match: XP_022968454.1 (uncharacterized protein LOC111467682 isoform X2 [Cucurbita maxima])

HSP 1 Score: 257.3 bits (656), Expect = 3.4e-65
Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 0

Query: 10  MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
           M DLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ  SEELFH
Sbjct: 1   MTDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ--SEELFH 60

Query: 70  QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 129
           QPN VEASRRRSPS+LAPDSQESSSCRKRRKMEEGGQMKVYG+ L+REIAESETGDKNGR
Sbjct: 61  QPNAVEASRRRSPSSLAPDSQESSSCRKRRKMEEGGQMKVYGDRLQREIAESETGDKNGR 120

Query: 130 RRDRVDVVLERAVVCLRKIQRFKTALISTA 160
           RRDRVDVVLERAVVCLRKIQRFKTALISTA
Sbjct: 121 RRDRVDVVLERAVVCLRKIQRFKTALISTA 148

BLAST of Carg18014 vs. NCBI nr
Match: XP_022968438.1 (uncharacterized protein LOC111467682 isoform X1 [Cucurbita maxima] >XP_022968446.1 uncharacterized protein LOC111467682 isoform X1 [Cucurbita maxima])

HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64
Identity = 142/151 (94.04%), Postives = 145/151 (96.03%), Query Frame = 0

Query: 10  MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
           M DLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ  SEELFH
Sbjct: 1   MTDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ--SEELFH 60

Query: 70  QPNTVEASRRRSPSTLAPDSQ-ESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 129
           QPN VEASRRRSPS+LAPDSQ ESSSCRKRRKMEEGGQMKVYG+ L+REIAESETGDKNG
Sbjct: 61  QPNAVEASRRRSPSSLAPDSQAESSSCRKRRKMEEGGQMKVYGDRLQREIAESETGDKNG 120

Query: 130 RRRDRVDVVLERAVVCLRKIQRFKTALISTA 160
           RRRDRVDVVLERAVVCLRKIQRFKTALISTA
Sbjct: 121 RRRDRVDVVLERAVVCLRKIQRFKTALISTA 149

BLAST of Carg18014 vs. TAIR10
Match: AT5G36960.1 (unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.1e-08
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 0

Query: 16  SEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFHQPNTVE 75
           S + +  + + AK ELE LQ  +PNRF YLK +L+SFI  L+                  
Sbjct: 4   SSSWEMQLVETAKEELEILQSQYPNRFAYLKSDLQSFISHLRED---------------H 63

Query: 76  ASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETG------DKNGR 135
           A  R SPS+    +QESS+C  ++K +   + K   + L  + + S TG      +K G+
Sbjct: 64  APPRLSPSSSVVLTQESSNCNYKQKHK---KRKCVMDNLGDQASSSTTGKIHKNNNKMGQ 123

Query: 136 R-----RDRVDVVLERAVVCLRKIQRFKTAL 156
           R     ++RV++VLERA +CL+KI+  K +L
Sbjct: 124 RVVTKKKNRVEMVLERAQLCLQKIRDVKASL 136

BLAST of Carg18014 vs. TrEMBL
Match: tr|A0A1S3BRF0|A0A1S3BRF0_CUCME (uncharacterized protein LOC103492458 OS=Cucumis melo OX=3656 GN=LOC103492458 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.4e-38
Identity = 104/157 (66.24%), Postives = 121/157 (77.07%), Query Frame = 0

Query: 3   NEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQS 62
           NE Y ER+  LEWS+ARK MIE+QA  EL+SLQLL+PNRFEYLKLELKSFI LLQSQ   
Sbjct: 33  NETYTERISSLEWSKARKTMIEEQANVELQSLQLLYPNRFEYLKLELKSFIHLLQSQ--- 92

Query: 63  RSEELFHQPNTVEASRRR-SPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAES 122
            SE  F QPNT+  S R  SP +  PD+QESSSCRKRRK+EEG   +   NGL+RE+AES
Sbjct: 93  -SEHPFPQPNTILTSNRSPSPFSFGPDTQESSSCRKRRKVEEGRNSR--RNGLQREVAES 152

Query: 123 ETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALIST 159
           E+  K GRR+DRV+VVLERA VCL KI+RFK AL S+
Sbjct: 153 ES--KIGRRKDRVEVVLERAAVCLCKIRRFKMALFSS 181

BLAST of Carg18014 vs. TrEMBL
Match: tr|A0A0A0LX97|A0A0A0LX97_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600880 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 101/160 (63.12%), Postives = 120/160 (75.00%), Query Frame = 0

Query: 3   NEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQS 62
           NE Y E++  LEWS+ARK MIE+QA AEL+SLQLL+PNRFEYLKLELKSFI LLQSQ   
Sbjct: 11  NETYTEKISSLEWSKARKTMIEEQANAELQSLQLLYPNRFEYLKLELKSFIHLLQSQ--- 70

Query: 63  RSEELFHQPNT-VEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIA-- 122
             E  F QPNT + ++R  SPS+  PD+QESSSCRKRRK+ EG       NGL++E+A  
Sbjct: 71  -PEHPFPQPNTNLTSNRSPSPSSFGPDTQESSSCRKRRKVAEGRNNG--RNGLQKEVAEY 130

Query: 123 ESETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALISTA 160
           E E+  K GR +DRVDVVLERA VCL KI+RFK AL S+A
Sbjct: 131 EYESETKMGRGKDRVDVVLERAAVCLCKIRRFKMALFSSA 164

BLAST of Carg18014 vs. TrEMBL
Match: tr|M1BI59|M1BI59_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102581035 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11
Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 0

Query: 25  DQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFHQPNTVEASRRRSPST 84
           ++AK ELE L+  HPN+FEYLKLEL+SFI  L+S          H  +T+       PS+
Sbjct: 2   EEAKKELEILETQHPNKFEYLKLELRSFISFLES----------HYSDTL-------PSS 61

Query: 85  LAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGRRRDRVDVVLERAVVC 144
              D+QESSS RKR+    G + +      ++++          R+R R+DVV+ERA  C
Sbjct: 62  SYVDTQESSSNRKRKNGSFGSKEQP-----KKKLQRVGQDTVGCRKRSRIDVVMERAQAC 109

Query: 145 LRKIQRFKTA 155
           LRKIQRFKT+
Sbjct: 122 LRKIQRFKTS 109

BLAST of Carg18014 vs. TrEMBL
Match: tr|A0A1U8FX04|A0A1U8FX04_CAPAN (uncharacterized protein LOC107859672 OS=Capsicum annuum OX=4072 GN=LOC107859672 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 53/130 (40.77%), Postives = 73/130 (56.15%), Query Frame = 0

Query: 25  DQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFHQPNTVEASRRRSPST 84
           +QAK ELE L+  +PN+FEYLKLEL+SFI  L+S S                     PS+
Sbjct: 2   EQAKKELEILETEYPNKFEYLKLELRSFISFLESDS--------------------LPSS 61

Query: 85  LAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGRRRDRVDVVLERAVVC 144
              D+QESSS RKR+    G + +      R+++  +        +R R+DVV+ERA  C
Sbjct: 62  SYVDTQESSSNRKRKTGSSGSREEP-----RKKLQRAVQDTAGCTKRSRIDVVMERAQAC 106

Query: 145 LRKIQRFKTA 155
           L+KIQRFKT+
Sbjct: 122 LQKIQRFKTS 106

BLAST of Carg18014 vs. TrEMBL
Match: tr|K4BA24|K4BA24_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=104645784 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.7e-10
Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 0

Query: 25  DQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFHQPNTVEASRRRSPST 84
           ++AK ELE L+  HPN+FEYLKLEL+SFI  L+S          H  +T+       PS+
Sbjct: 2   EEAKKELEILETQHPNKFEYLKLELRSFISFLES----------HYSHTL-------PSS 61

Query: 85  LAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGRRRDRVDVVLERAVVC 144
              D+QESSS RKR+      + +      ++++           +R R+DVV+ERA  C
Sbjct: 62  SYVDTQESSSNRKRKNGSFASKEEP-----KKKLQRVGQDTVGCNKRSRIDVVMERAQAC 109

Query: 145 LRKIQRFKTA 155
           LRKIQRFKT+
Sbjct: 122 LRKIQRFKTS 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022933880.13.8e-72100.00uncharacterized protein LOC111441161 isoform X2 [Cucurbita moschata][more]
XP_022933879.19.3e-7199.34uncharacterized protein LOC111441161 isoform X1 [Cucurbita moschata][more]
XP_023531053.17.9e-7097.35uncharacterized protein LOC111793421 [Cucurbita pepo subsp. pepo][more]
XP_022968454.13.4e-6594.67uncharacterized protein LOC111467682 isoform X2 [Cucurbita maxima][more]
XP_022968438.18.5e-6494.04uncharacterized protein LOC111467682 isoform X1 [Cucurbita maxima] >XP_022968446... [more]
Match NameE-valueIdentityDescription
AT5G36960.16.1e-0834.44unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BRF0|A0A1S3BRF0_CUCME2.4e-3866.24uncharacterized protein LOC103492458 OS=Cucumis melo OX=3656 GN=LOC103492458 PE=... [more]
tr|A0A0A0LX97|A0A0A0LX97_CUCSA1.1e-3563.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600880 PE=4 SV=1[more]
tr|M1BI59|M1BI59_SOLTU1.4e-1142.31Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102581035 PE=4 SV=1[more]
tr|A0A1U8FX04|A0A1U8FX04_CAPAN1.6e-1040.77uncharacterized protein LOC107859672 OS=Capsicum annuum OX=4072 GN=LOC107859672 ... [more]
tr|K4BA24|K4BA24_SOLLC2.7e-1040.77Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=104645784 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18014-RACarg18014-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..91