Lsi05G015250 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G015250
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_3
Location	chr05 : 23056800 .. 23057987 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTCAATTTACTCGTTCGACACGTCGTTCAAGCTCCCGCCCCACGGGGACGACAAAACGACTTTCCCTCTCATTCCCGAAGCCGAAAGAAAAGAAAGGACAGACAAGCTGCAGAAGGAAACTGTATTCAGATTTTAGAAAAACAAATAGAAAGAATCCATAGCCATGGAGGATCTTACCGAAGAAGAAAGACGTGCTTTACGGGGCAGCAAATTCGCGCCACTACCATCCCAATCCACTTCCTCTCGATCTCACCCAAGGTTTTGAAACTAATAATACTCTCTTCTTCTTCTTCTTCTTCTTCATCATCTCTTTCAGTCTCTAGTCTAGGGTTTCTCTTCTGTAAATCCTAATCAATGGGTTTCTATTCAAAGGTTGGCTCATCCAGGTGGACCATTGAAGACCAACAAAGCGGCGGCTCTCGCCAAATTTCTCCAGAGGAAATTGCACCAAGATCCTAATGCTTTGTCTTCTATCAATCCCCAGATTTTGGACCTCGCTGTTCGTAATGCCAAAGCTTCTGTTCTTTCCAGTTCGTATTCTCTCTCCCTCTTTTCTTTTTTCTTTTTTTTTTTTAAAAAAAAACCTTTGTTTTTCTTGTTGCAAGTGGGGAATTAAGGAAATGGGACTGGGATCGTGAAGAATATAGACCATAAATTGCTGCTACTATGGAATGTGTTGAATAGAAAATATAATGAACTAATCAAATCAAATCAAACTTTGCTCTGTCTCACCATCTCTTATTCTTTTCTATATCTATATCTATGGTGTTGTTTTATCAGGTGGCACGTCAGGTTCTGGCACAAATATTCTCCATGTGGACTCATTTGATGATCCTGAGGTTTTTTTCTATTCAGAATTCTTGAATCTAATGTCTTAGGGCCCGTTTATCATCATTCTAGTTATAATTTGACTGATGATAATGATGATGATTCAGGCCTCTTTTGACGAAGGGGAATCCATGAATTCTGAGCCTAGAAAACAGAAGAACAAGAAGAAGAAGAAGAAGAAAAATAAGAAGAATAAGAGGCAAAAGGTTGGAATCCCTTCATGGTTTTGTTTTAAGCTTCTATATAGTCTTAGCGTTTGCCTCTATATTTCCTCATGATAAATCTCTTGTGACTGTACTGCAGATTGTTGAGGACTCCGGGTGTGGCGTTGTGAAAAAACCCAAAAAGAAGTTGAGA

mRNA sequence

AAATTCAATTTACTCGTTCGACACGTCGTTCAAGCTCCCGCCCCACGGGGACGACAAAACGACTTTCCCTCTCATTCCCGAAGCCGAAAGAAAAGAAAGGACAGACAAGCTGCAGAAGGAAACTGTATTCAGATTTTAGAAAAACAAATAGAAAGAATCCATAGCCATGGAGGATCTTACCGAAGAAGAAAGACGTGCTTTACGGGGCAGCAAATTCGCGCCACTACCATCCCAATCCACTTCCTCTCGATCTCACCCAAGGTTTTGAAACTAATAATACTCTCTTCTTCTTCTTCTTCTTCTTCATCATCTCTTTCAGGTTTCTCTTCTGTAAATCCTAATCAATGGGTTTCTATTCAAAGGTTGGCTCATCCAGGTGGACCATTGAAGACCAACAAAGCGGCGGCTCTCGCCAAATTTCTCCAGAGGAAATTGCACCAAGATCCTAATGCTTTGTCTTCTATCAATCCCCAGATTTTGGACCTCGCTGTTCGTAATGCCAAAGCTTCTGTTCTTTCCAGTGGCACGTCAGGTTCTGGCACAAATATTCTCCATGTGGACTCATTTGATGATCCTGAGGCCTCTTTTGACGAAGGGGAATCCATGAATTCTGAGCCTAGAAAACAGAAGAACAAGAAGAAGAAGAAGAAGAAAAATAAGAAGAATAAGAGGCAAAAGATTGTTGAGGACTCCGGGTGTGGCGTTGTGAAAAAACCCAAAAAGAAGTTGAGA

Coding sequence (CDS)

AAATTCAATTTACTCGTTCGACACGTCGTTCAAGCTCCCGCCCCACGGGGACGACAAAACGACTTTCCCTCTCATTCCCGAAGCCGAAAGAAAAGAAAGGACAGACAAGCTGCAGAAGGAAACTGTATTCAGATTTTAGAAAAACAAATAGAAAGAATCCATAGCCATGGAGGATCTTACCGAAGAAGAAAGACGTGCTTTACGGGGCAGCAAATTCGCGCCACTACCATCCCAATCCACTTCCTCTCGATCTCACCCAAGGTTTTGAAACTAATAATACTCTCTTCTTCTTCTTCTTCTTCTTCATCATCTCTTTCAGGTTTCTCTTCTGTAAATCCTAATCAATGGGTTTCTATTCAAAGGTTGGCTCATCCAGGTGGACCATTGAAGACCAACAAAGCGGCGGCTCTCGCCAAATTTCTCCAGAGGAAATTGCACCAAGATCCTAATGCTTTGTCTTCTATCAATCCCCAGATTTTGGACCTCGCTGTTCGTAATGCCAAAGCTTCTGTTCTTTCCAGTGGCACGTCAGGTTCTGGCACAAATATTCTCCATGTGGACTCATTTGATGATCCTGAGGCCTCTTTTGACGAAGGGGAATCCATGAATTCTGAGCCTAGAAAACAGAAGAACAAGAAGAAGAAGAAGAAGAAAAATAAGAAGAATAAGAGGCAAAAGATTGTTGAGGACTCCGGGTGTGGCGTTGTGAAAAAACCCAAAAAGAAGTTGAGA

Protein sequence

KFNLLVRHVVQAPAPRGRQNDFPSHSRSRKKRKDRQAAEGNCIQILEKQIERIHSHGGSYRRRKTCFTGQQIRATTIPIHFLSISPKVLKLIILSSSSSSSSSSLSGFSSVNPNQWVSIQRLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTNILHVDSFDDPEASFDEGESMNSEPRKQKNKKKKKKKNKKNKRQKIVEDSGCGVVKKPKKKLR

Homology

[Close]

BLAST of Lsi05G015250 vs. TrEMBL
Match: A0A0A0LAK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G153160 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-43
Identity = 108/125 (86.40%), Postives = 111/125 (88.80%), Query Frame = 1


Query: 121 RLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSG 180
           RLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV S     SG
Sbjct: 34  RLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHS-----SG 93

Query: 181 TNILHVDSFDDPEASFDEGESMNSEPRKQKNK-KKKKKKNKKNKRQKIVEDSGCGVVKKP 240
           TNI HVD+FDDPEASFDEGESMNSEP+KQK K KKKK KNKKNKRQKIVEDS CGV  KP
Sbjct: 94  TNIRHVDTFDDPEASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKP 153

Query: 241 KKKLR 245
           KKKLR
Sbjct: 154 KKKLR 153

[Close]

BLAST of Lsi05G015250 vs. TrEMBL
Match: A0A0B0NRZ7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_04521 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.2e-29
Identity = 83/136 (61.03%), Postives = 100/136 (73.53%), Query Frame = 1


Query: 113 PNQWVSIQRLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVL 172
           P   +S  RLAHPGGPL TNKAAALAKFL+RKL QDPN LSSINPQ+L+LAV NAKA+V 
Sbjct: 26  PPPSLSKPRLAHPGGPLTTNKAAALAKFLERKL-QDPNGLSSINPQLLELAVNNAKATVF 85

Query: 173 SSGTSGSGTNILHVDSFDDPEASFDEGESMNSEPRKQKNKKKKKKKNKKNKR----QKIV 232
            SG S SGT + HVDSF D E S +E +S   EP+K  NK K K +NKKNK+    +K+V
Sbjct: 86  QSGASSSGTRVRHVDSFGDSEDSLEEAKSGIPEPKKDTNKNKNKNRNKKNKKKNKMKKVV 145

Query: 233 EDSGCGVVKKPKKKLR 245
           ED  C  +K+PKKK++
Sbjct: 146 EDHEC-TLKRPKKKVK 159

[Close]

BLAST of Lsi05G015250 vs. TrEMBL
Match: M5XR07_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024882mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 83/125 (66.40%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 121 RLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSG 180
           RLAHPGGPL TNKAAALAKFL+RKL QDPN L +INP +++ AV+NAK +V +SG S SG
Sbjct: 37  RLAHPGGPLTTNKAAALAKFLERKL-QDPNGLDNINPHLVERAVQNAKRTVFASGASNSG 96

Query: 181 TNILHVDSFDDP--EASFDEGESM-NSEPRKQKNKKKKKKKNKKNKRQKIVEDSGCGVVK 240
             I HVDSF D   E S  + E++ NSEP+K K K KKKKK++K KRQKI+EDSGC VVK
Sbjct: 97  ITIRHVDSFGDYDFEDSLQQEENVENSEPKKLKKKIKKKKKSEKKKRQKIMEDSGCAVVK 156

Query: 241 KPKKK 243
           KPKKK
Sbjct: 157 KPKKK 160

[Close]

BLAST of Lsi05G015250 vs. TrEMBL
Match: U5G6R2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s22650g PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 1


Query: 106 SGFSSVNPNQWVSIQ-RLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAV 165
           S F+ + P  + S Q RLAHPGGPL+TNKAAALAKFL+RKL QDPN L+SI+P IL+LAV
Sbjct: 16  SKFAPLPPPSFRSQQPRLAHPGGPLRTNKAAALAKFLERKL-QDPNGLASIDPDILELAV 75

Query: 166 RNAKASVLSSGTSGSGTNILHVDSFDDPEASFDEGESMNSEPRKQKNKKKKKKKNKKNKR 225
           +NAK +VL+SGTS SGT I HV  F + E SF+E     S P+K+K K KKK   KKNK+
Sbjct: 76  KNAKDTVLTSGTSKSGTIIHHVTDFGNSEESFEEDRVEKSSPKKRKGKNKKK--GKKNKK 135

Query: 226 QKIVEDSGCGVVKKPKKKLR 245
           QKIV+DS C  +KK KKKL+
Sbjct: 136 QKIVDDSECANLKKRKKKLK 152

[Close]

BLAST of Lsi05G015250 vs. TrEMBL
Match: A0A0D2N8D8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G059100 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 83/135 (61.48%), Postives = 96/135 (71.11%), Query Frame = 1


Query: 113 PNQWVSIQRLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVL 172
           P   +S  RLAHPGGPL TNKAAALAKFL+RKL QDPN LSSINPQ+L+LAV NAKA+V 
Sbjct: 26  PPPSLSKPRLAHPGGPLTTNKAAALAKFLERKL-QDPNGLSSINPQLLELAVNNAKATVF 85

Query: 173 SSGTSGSGTNILHVDSFDDPEASFDEGESMNSEPR------KQKNKKKKKKKNKKNKRQK 232
            SG S SGT + HVDSF D E S +E +S   EP+      K KNK K KK  KKNK +K
Sbjct: 86  QSGASSSGTRVRHVDSFGDSEDSSEEAKSGIPEPKKDTNKNKNKNKNKNKKNKKKNKMKK 145

Query: 233 IVEDSGCGVVKKPKK 242
           +VED  C  +K+PKK
Sbjct: 146 VVEDHEC-TLKRPKK 158

[Close]

BLAST of Lsi05G015250 vs. TAIR10
Match: AT5G18540.1 (AT5G18540.1 unknown protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-26
Identity = 75/132 (56.82%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 121 RLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSG 180
           RLAHPGGPLKTNKAAALAKFL+RKL QDPN L+SI+P +++LAV+NAK +V+SSG S SG
Sbjct: 39  RLAHPGGPLKTNKAAALAKFLERKL-QDPNGLASIDPALVELAVKNAKDTVISSGASSSG 98

Query: 181 TNILHVDSFDDPEASFDEGESMNSEPRKQKNKK--------KKKKKNKKNKRQKIVEDSG 240
             I HV SF+D E S D+ +  N++  K+K KK        KKKKKNKK+K+Q  V++  
Sbjct: 99  RRIQHVASFEDVEVSSDDDKIENTKLNKKKKKKNAKKKKEEKKKKKNKKHKQQITVDED- 158

Query: 241 CGVVKKPKKKLR 245
              +K+P KKL+
Sbjct: 159 -AKLKRPNKKLK 167

[Close]

BLAST of Lsi05G015250 vs. NCBI nr
Match: gi|449432830|ref|XP_004134201.1| (PREDICTED: uncharacterized protein LOC101221899 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 2.2e-43
Identity = 108/125 (86.40%), Postives = 111/125 (88.80%), Query Frame = 1


Query: 121 RLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSG 180
           RLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV S     SG
Sbjct: 34  RLAHPGGPLKTNKAAALAKFLHRKLNQDPNALSSINPQILDLAVRNAKASVHS-----SG 93

Query: 181 TNILHVDSFDDPEASFDEGESMNSEPRKQKNK-KKKKKKNKKNKRQKIVEDSGCGVVKKP 240
           TNI HVD+FDDPEASFDEGESMNSEP+KQK K KKKK KNKKNKRQKIVEDS CGV  KP
Sbjct: 94  TNIRHVDTFDDPEASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGGKP 153

Query: 241 KKKLR 245
           KKKLR
Sbjct: 154 KKKLR 153

[Close]

BLAST of Lsi05G015250 vs. NCBI nr
Match: gi|659076795|ref|XP_008438870.1| (PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 104/123 (84.55%), Postives = 106/123 (86.18%), Query Frame = 1


Query: 121 RLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSG 180
           RLAHPGGPLKTNKAAALAKFL RKLHQDPNA SSINPQILDLAVRNAKASV S     SG
Sbjct: 34  RLAHPGGPLKTNKAAALAKFLHRKLHQDPNAFSSINPQILDLAVRNAKASVHS-----SG 93

Query: 181 TNILHVDSFDDPEASFDEGESMNSEPRKQKNK-KKKKKKNKKNKRQKIVEDSGCGVVKKP 240
           TNI HVD+FDDPEASFDEGESMNSEP+KQK K KKKK KNKKNKRQKIVEDS CGV K P
Sbjct: 94  TNIRHVDTFDDPEASFDEGESMNSEPKKQKKKNKKKKNKNKKNKRQKIVEDSECGVGKNP 151

Query: 241 KKK 243
             K
Sbjct: 154 NPK 151

[Close]

BLAST of Lsi05G015250 vs. NCBI nr
Match: gi|728835156|gb|KHG14599.1| (hypothetical protein F383_04521 [Gossypium arboreum])

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28
Identity = 83/136 (61.03%), Postives = 100/136 (73.53%), Query Frame = 1


Query: 113 PNQWVSIQRLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVL 172
           P   +S  RLAHPGGPL TNKAAALAKFL+RKL QDPN LSSINPQ+L+LAV NAKA+V 
Sbjct: 26  PPPSLSKPRLAHPGGPLTTNKAAALAKFLERKL-QDPNGLSSINPQLLELAVNNAKATVF 85

Query: 173 SSGTSGSGTNILHVDSFDDPEASFDEGESMNSEPRKQKNKKKKKKKNKKNKR----QKIV 232
            SG S SGT + HVDSF D E S +E +S   EP+K  NK K K +NKKNK+    +K+V
Sbjct: 86  QSGASSSGTRVRHVDSFGDSEDSLEEAKSGIPEPKKDTNKNKNKNRNKKNKKKNKMKKVV 145

Query: 233 EDSGCGVVKKPKKKLR 245
           ED  C  +K+PKKK++
Sbjct: 146 EDHEC-TLKRPKKKVK 159

[Close]

BLAST of Lsi05G015250 vs. NCBI nr
Match: gi|1009163415|ref|XP_015899956.1| (PREDICTED: E3 ubiquitin-protein ligase RBBP6 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28
Identity = 82/131 (62.60%), Postives = 103/131 (78.63%), Query Frame = 1


Query: 113 PNQWVSIQRLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVL 172
           P+   S  RLAHPGGPL TNKAAALAKFL+RKL Q+PN L+S+NP +++LAV NAK +V 
Sbjct: 26  PSSSRSQPRLAHPGGPLTTNKAAALAKFLERKL-QEPNGLASLNPDLIELAVNNAKNTVF 85

Query: 173 SSGTSGSGTNILHVDSFDD--PEASFDEGESMNSEPRKQKNKKKKKKKNKKNKRQKIVED 232
           SSGTS SG NI HV+SF D  PE S +EG++ +S+P+K+K KKKKK + KKNK+QK +ED
Sbjct: 86  SSGTSDSGRNIRHVNSFGDSEPEESSEEGKAESSKPKKRK-KKKKKHEKKKNKKQKTMED 145

Query: 233 SGCGVVKKPKK 242
            G  V+KKPKK
Sbjct: 146 HGSAVMKKPKK 154

[Close]

BLAST of Lsi05G015250 vs. NCBI nr
Match: gi|596296391|ref|XP_007227165.1| (hypothetical protein PRUPE_ppa024882mg [Prunus persica])

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 83/125 (66.40%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 121 RLAHPGGPLKTNKAAALAKFLQRKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSG 180
           RLAHPGGPL TNKAAALAKFL+RKL QDPN L +INP +++ AV+NAK +V +SG S SG
Sbjct: 37  RLAHPGGPLTTNKAAALAKFLERKL-QDPNGLDNINPHLVERAVQNAKRTVFASGASNSG 96

Query: 181 TNILHVDSFDDP--EASFDEGESM-NSEPRKQKNKKKKKKKNKKNKRQKIVEDSGCGVVK 240
             I HVDSF D   E S  + E++ NSEP+K K K KKKKK++K KRQKI+EDSGC VVK
Sbjct: 97  ITIRHVDSFGDYDFEDSLQQEENVENSEPKKLKKKIKKKKKSEKKKRQKIMEDSGCAVVK 156

Query: 241 KPKKK 243
           KPKKK
Sbjct: 157 KPKKK 160

The following BLAST results are available for this feature:

BLAST of Lsi05G015250 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G015250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAK0_CUCSA	1.5e-43	86.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G153160 PE=4 SV=1	[more]
A0A0B0NRZ7_GOSAR	8.2e-29	61.03	Uncharacterized protein OS=Gossypium arboreum GN=F383_04521 PE=4 SV=1	[more]
M5XR07_PRUPE	1.1e-28	66.40	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024882mg PE=4 SV=1	[more]
U5G6R2_POPTR	1.8e-28	61.43	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s22650g PE=4 SV=1	[more]
A0A0D2N8D8_GOSRA	1.6e-27	61.48	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G059100 PE=4 SV=1	[more]

BLAST of Lsi05G015250 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18540.1	2.6e-26	56.82	unknown protein	[more]

BLAST of Lsi05G015250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432830\|ref\|XP_004134201.1\|	2.2e-43	86.40	PREDICTED: uncharacterized protein LOC101221899 [Cucumis sativus]	[more]
gi\|659076795\|ref\|XP_008438870.1\|	1.2e-41	84.55	PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]	[more]
gi\|728835156\|gb\|KHG14599.1\|	1.2e-28	61.03	hypothetical protein F383_04521 [Gossypium arboreum]	[more]
gi\|1009163415\|ref\|XP_015899956.1\|	1.2e-28	62.60	PREDICTED: E3 ubiquitin-protein ligase RBBP6 isoform X2 [Ziziphus jujuba]	[more]
gi\|596296391\|ref\|XP_007227165.1\|	1.5e-28	66.40	hypothetical protein PRUPE_ppa024882mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G015250.1	Lsi05G015250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37255	FAMILY NOT NAMED	coord: 121..244 score: 1.7
None	No IPR available	PANTHER	PTHR37255:SF1	SUBFAMILY NOT NAMED	coord: 121..244 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G015250	Csa3G153160	Cucumber (Chinese Long) v2	culsiB199
Lsi05G015250	CSPI03G14210	Wild cucumber (PI 183967)	cpilsiB198
Lsi05G015250	Cucsa.253290	Cucumber (Gy14) v1	cgylsiB420
Lsi05G015250	CmaCh14G016310	Cucurbita maxima (Rimu)	cmalsiB250
Lsi05G015250	CmoCh14G016680	Cucurbita moschata (Rifu)	cmolsiB238
Lsi05G015250	Cla021726	Watermelon (97103) v1	lsiwmB362
Lsi05G015250	MELO3C006643	Melon (DHL92) v3.5.1	lsimeB369
Lsi05G015250	ClCG05G005980	Watermelon (Charleston Gray)	lsiwcgB333
Lsi05G015250	MELO3C006643.2	Melon (DHL92) v3.6.1	lsimedB385
Lsi05G015250	Cla97C05G087470	Watermelon (97103) v2	lsiwmbB330
Lsi05G015250	Bhi01G000699	Wax gourd	lsiwgoB432
Lsi05G015250	Cp4.1LG03g11450	Cucurbita pepo (Zucchini)	cpelsiB512
Lsi05G015250	CsGy3G014360	Cucumber (Gy14) v2	cgyblsiB184
Lsi05G015250	Carg20121	Silver-seed gourd	carlsiB761
Lsi05G015250	CsaV3_3G014430	Cucumber (Chinese Long) v3	cuclsiB218

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G015250	Bottle gourd (USVL1VR-Ls)	lsilsiB006
Lsi05G015250	Cucumber (Gy14) v1	cgylsiB287
Lsi05G015250	Cucurbita maxima (Rimu)	cmalsiB353
Lsi05G015250	Cucurbita maxima (Rimu)	cmalsiB757
Lsi05G015250	Cucurbita maxima (Rimu)	cmalsiB834
Lsi05G015250	Cucurbita moschata (Rifu)	cmolsiB342
Lsi05G015250	Cucurbita moschata (Rifu)	cmolsiB752
Lsi05G015250	Cucurbita moschata (Rifu)	cmolsiB819
Lsi05G015250	Cucurbita pepo (Zucchini)	cpelsiB118
Lsi05G015250	Cucurbita pepo (Zucchini)	cpelsiB268
Lsi05G015250	Cucurbita pepo (Zucchini)	cpelsiB718
Lsi05G015250	Wild cucumber (PI 183967)	cpilsiB474
Lsi05G015250	Cucumber (Chinese Long) v2	culsiB466
Lsi05G015250	Melon (DHL92) v3.5.1	lsimeB342
Lsi05G015250	Watermelon (Charleston Gray)	lsiwcgB345
Lsi05G015250	Watermelon (97103) v1	lsiwmB384
Lsi05G015250	Cucumber (Gy14) v2	cgyblsiB433
Lsi05G015250	Melon (DHL92) v3.6.1	lsimedB359
Lsi05G015250	Silver-seed gourd	carlsiB065
Lsi05G015250	Silver-seed gourd	carlsiB552
Lsi05G015250	Cucumber (Chinese Long) v3	cuclsiB494
Lsi05G015250	Watermelon (97103) v2	lsiwmbB344
Lsi05G015250	Wax gourd	lsiwgoB423