CmoCh14G016680 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCAGCCTCCCGCCCAGTGAGACGACAAAATGGAGTTTTCCCGGTCATCCCCAATAGAGAAGAGGAAGGAGGGAAGAGGGCGATGCGGTAAAAGGCGCAGAAAGAAAGCATCCGTCTGCAGATTTGAGAGAAAATCCATAAAGTAATAAGGGCATAATAATAATAGGAGGATGATGGAGGATCTTAGCGAAGAAGAAAGACGAGCTTTACGGGGCAGCAAATTCGCGCCACTCCCATCCCAACCCACTTCCTCCAGATCTCACCCCAGGTTTCTTCTTCTTCATCTCTCCCTCCCCACCCCACTCCCTAGGGTTTCTCTTTCTGTTCATCCCTAAATTCAATGGCTCTTTGAATTCCAAGGTTGGCTCATCCTGGTGGTCCATTGAAGACAAACAAGGCGGCGGCTCTCGCCAAGTTTCTCGACAGGAAACTGCATCAAGATCCTAATGGTTTGTCTTCTATCAATCCCCAGATTTTGGAGCTCGCCGTTCGGAATGCCAAGGCCTCTGTTCTCTCCAGTTCGTATTCCCCACCCCCTTTTTCTTGTCTCTGTTTTTCTTCTTGTTGTTGCAAGGAAGGTTGCTTTTGTAGAGATCATGAAGAACATAGACCATAAATTTACTACTACTACTAATCAACTTTCCTTTTCTTCTCTATATTCAGGTTCTGGCACAAATATTCGCCATGTGGACACTTTCGATGACCCTGAGGTTTTTCCTTTCAGGATTCCTTGCCCTTTTTATCATTCTAGAACTACTAATTTAACGGAGGATGATGATGATGATGATGGTGATGATGTAGGCCTCTTTTGACGATGGGGAAGCCATGAATTCTGAGCCTAAAAAACAGAAGAACAAGAACAAGAAGAACAAGAAGAACAAGAACAAGAAAACTAAGAAGAATAAAAGGCAAAAAAAGGTTGAAATCCCTTCAATGTTTTGTTTTAAGCTGTGTATTCTGGGTGTTGGTTCTATATATTTCTCCATGATAAACCTGTGGTGATTTTACTGCAGATCGTTGAGGATTCCGGGTGTGGCGTTGGGAAAAGACCCAAAAAGAAGTTGAAATTGTGAGCAGAAACACAACTAACACAACTGGAGATATTCAGTTTTCAAAAGGTTGGATTGGGGAATAACCTGAAAGGAGTTAAAATGCTGTGTTTTGAATCAAGAAGCTATTGAGCCCTACAGGGTTGCTGTTCCTGATATTTGTTAAGAGGATTATTTGAGTCTCAGATTCACGAATCTTAAACATTTGATTGACTTGATTTCTCTAGCAAAAGAATGCTTTTAGCTTCTACTTTCTTGTAATCCAATTGCTTGAATACTTACTATTACCTATTTGATCATTCTAGAATTCCATGCTTAAATGGGTCTTCTTCTACTC GTTCAGCCTCCCGCCCAGTGAGACGACAAAATGGAGTTTTCCCGGTCATCCCCAATAGAGAAGAGGAAGGAGGGAAGAGGGCGATGCGGTAAAAGGCGCAGAAAGAAAGCATCCGTCTGCAGATTTGAGAGAAAATCCATAAAGTAATAAGGGCATAATAATAATAGGAGGATGATGGAGGATCTTAGCGAAGAAGAAAGACGAGCTTTACGGGGCAGCAAATTCGCGCCACTCCCATCCCAACCCACTTCCTCCAGATCTCACCCCAGGTTGGCTCATCCTGGTGGTCCATTGAAGACAAACAAGGCGGCGGCTCTCGCCAAGTTTCTCGACAGGAAACTGCATCAAGATCCTAATGGTTTGTCTTCTATCAATCCCCAGATTTTGGAGCTCGCCGTTCGGAATGCCAAGGCCTCTGTTCTCTCCAGTTCTGGCACAAATATTCGCCATGTGGACACTTTCGATGACCCTGAGGCCTCTTTTGACGATGGGGAAGCCATGAATTCTGAGCCTAAAAAACAGAAGAACAAGAACAAGAAGAACAAGAAGAACAAGAACAAGAAAACTAAGAAGAATAAAAGGCAAAAAAAGATCGTTGAGGATTCCGGGTGTGGCGTTGGGAAAAGACCCAAAAAGAAGTTGAAATTGTGAGCAGAAACACAACTAACACAACTGGAGATATTCAGTTTTCAAAAGGTTGGATTGGGGAATAACCTGAAAGGAGTTAAAATGCTGTGTTTTGAATCAAGAAGCTATTGAGCCCTACAGGGTTGCTGTTCCTGATATTTGTTAAGAGGATTATTTGAGTCTCAGATTCACGAATCTTAAACATTTGATTGACTTGATTTCTCTAGCAAAAGAATGCTTTTAGCTTCTACTTTCTTGTAATCCAATTGCTTGAATACTTACTATTACCTATTTGATCATTCTAGAATTCCATGCTTAAATGGGTCTTCTTCTACTC ATGATGGAGGATCTTAGCGAAGAAGAAAGACGAGCTTTACGGGGCAGCAAATTCGCGCCACTCCCATCCCAACCCACTTCCTCCAGATCTCACCCCAGGTTGGCTCATCCTGGTGGTCCATTGAAGACAAACAAGGCGGCGGCTCTCGCCAAGTTTCTCGACAGGAAACTGCATCAAGATCCTAATGGTTTGTCTTCTATCAATCCCCAGATTTTGGAGCTCGCCGTTCGGAATGCCAAGGCCTCTGTTCTCTCCAGTTCTGGCACAAATATTCGCCATGTGGACACTTTCGATGACCCTGAGGCCTCTTTTGACGATGGGGAAGCCATGAATTCTGAGCCTAAAAAACAGAAGAACAAGAACAAGAAGAACAAGAAGAACAAGAACAAGAAAACTAAGAAGAATAAAAGGCAAAAAAAGATCGTTGAGGATTCCGGGTGTGGCGTTGGGAAAAGACCCAAAAAGAAGTTGAAATTGTGA
BLAST of CmoCh14G016680 vs. TrEMBL
Match: A0A0A0LAK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G153160 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.2e-59 Identity = 138/159 (86.79%), Postives = 146/159 (91.82%), Query Frame = 1
BLAST of CmoCh14G016680 vs. TrEMBL
Match: A0A061EW19_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_046784 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.1e-41 Identity = 110/164 (67.07%), Postives = 129/164 (78.66%), Query Frame = 1
BLAST of CmoCh14G016680 vs. TrEMBL
Match: A0A0B0NRZ7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_04521 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.6e-39 Identity = 108/161 (67.08%), Postives = 124/161 (77.02%), Query Frame = 1
BLAST of CmoCh14G016680 vs. TrEMBL
Match: A0A0D2N8D8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G059100 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 7.5e-39 Identity = 106/157 (67.52%), Postives = 120/157 (76.43%), Query Frame = 1
BLAST of CmoCh14G016680 vs. TrEMBL
Match: V4S7I7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005896mg PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 3.5e-36 Identity = 107/162 (66.05%), Postives = 125/162 (77.16%), Query Frame = 1
BLAST of CmoCh14G016680 vs. TAIR10
Match: AT5G18540.1 (AT5G18540.1 unknown protein) HSP 1 Score: 149.8 bits (377), Expect = 1.4e-36 Identity = 97/162 (59.88%), Postives = 121/162 (74.69%), Query Frame = 1
BLAST of CmoCh14G016680 vs. NCBI nr
Match: gi|449432830|ref|XP_004134201.1| (PREDICTED: uncharacterized protein LOC101221899 [Cucumis sativus]) HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59 Identity = 138/159 (86.79%), Postives = 146/159 (91.82%), Query Frame = 1
BLAST of CmoCh14G016680 vs. NCBI nr
Match: gi|659076795|ref|XP_008438870.1| (PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]) HSP 1 Score: 231.5 bits (589), Expect = 1.0e-57 Identity = 135/156 (86.54%), Postives = 140/156 (89.74%), Query Frame = 1
BLAST of CmoCh14G016680 vs. NCBI nr
Match: gi|590660973|ref|XP_007035543.1| (Uncharacterized protein TCM_046784 [Theobroma cacao]) HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41 Identity = 110/164 (67.07%), Postives = 129/164 (78.66%), Query Frame = 1
BLAST of CmoCh14G016680 vs. NCBI nr
Match: gi|728835156|gb|KHG14599.1| (hypothetical protein F383_04521 [Gossypium arboreum]) HSP 1 Score: 169.9 bits (429), Expect = 3.7e-39 Identity = 108/161 (67.08%), Postives = 124/161 (77.02%), Query Frame = 1
BLAST of CmoCh14G016680 vs. NCBI nr
Match: gi|823164298|ref|XP_012482098.1| (PREDICTED: uncharacterized protein LOC105796822 [Gossypium raimondii]) HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38 Identity = 106/157 (67.52%), Postives = 120/157 (76.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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