Lsi05G013930 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTCATAATTGTTCCTCGAAATTCTCAATTCCTTGCTCTGAGCTGTTCTCCTTTTCCTCCTTCAAAATCAAATAATCAAACCTTCCATTGAGTTTTTCTCATTACCAGAAATTATTGCTTTTCATGAACTCCATGGCGTCGCTACCGCTTTCCGCCATCTCCGGCCACCGGAATCTCAAATTTCCATGGCCGCTACTCTTCTTACTACCATTACTTTTACCTAAATCTCTCACATTCGCCTCACCTTGCCGGACATCCTGCGGCAACATTCCTATCAAATACCCCTTCGGAATCGACGACGGCTGCGGAGCGCCTCAATTCCGCCATATGTTCAATTGCTCCACCGATCTCTTCTTCCTCACTCCCTCCGGCAGTTACAAAGTACAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCAGCGATGTCGACTTGCTCCATCCTTCAACCGCACCACGATTTTACCATGACCGACATCCAATCGATCATCATTCCGCCGTCACCAGACACCGTCTTCGCTCTCCTAAACTGCTCGATCGATTCTCCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCCGGCCATTCCTGCGATGAACTCTACGGCGCCTGTAACGCGTTCCGAGTGTTCCATCTGTTGACGAACAGTACTTCGCCGCCGTGCTGTTTCACTGAATACGATACGGTGAAGTTGATGAGTATGAACATTCTGGATTGCACGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAAGGAGTAGGGGCTTTGGATTGGGAATACGGTATGAAATTGAGCTTTGCGGTTACGGATTTGGGATGCGATCGGTGCTTGAAATCGGGAGGAAGCTGTGGATTTGATACTGAAACGGAAGGATTGTTGTGCCTCTGCTCCATTTCTTCTAATCATACTAGGGATTGCGGTATGGCCTCTTTGCATTACCATGACACATTGCTTTCAATAACTTTTTTTTTTTTTTTAATACTTATTTTCATTTCTAAACTTTTAATTTTATGAAAAAATATTTTTAATTTCAAGATTTACATTATTAACTTTTTAGTCTTTTTAAATTTTGAGTTTGATTTCAATTTAATACAAAGATTTTAAAATGTCGCAATTTTATCTTAGAATATTCCAGATTATCATGAATTTCAAGATTTATACTTTTAATTTAGATTTTCACTAAATATTCGTTTTCTCTTGTTAGTGTTAATATTTATTATTAATTTTAAAAAAATTATAATTAATTGAATTTCACTATTAGAATTTAATTTTAAATTTTACTTCATAATCATTTTAAGTTAATTAAAACATTAATATCAAATATTAAAAATGAGTATTTGTTGAAAAATTAAGGTTAAAAGTGTAAATATTGAAACATATAGGCTACTAAATTAAAACAAAATTCAAATCTAAAGAGTAAATCGGTAACATTTTGAAACTTTTACGTTAAATTGAAATCAAACTCAAAACTTAAAAGTAGTAAAAGTGTAACATTTTGAAATCTATAGATCAAATGGAAGCTAAATTCAAAACTTAAGGATCAAAAAGATATTCTCTGCTTAATTTTATATTATTTAGATAAAAATACCATTTTTGATCTTTCTACTTTGTGTCTTGTACTTTCAATAAATCTTAAATATTGATTTTTTTTCAACAAAAAAAATTAATCTCTATTAGCATTTCAGAAAATATATTCACATGGTATCTTTTCTTGTATGAAAATTATTATTGTTGTTGTTTGAAAATTTTCGATAAAAATTAACTTTCAATGACTAGATTTAATATCTTTTGAAAATACATGAACTATAAAATTGAATGGGCAATAATTAGGCATAGCATTAGTTACATCTATCTTCCTACAATCTCTTCATTTATCACATGACAAGAAAATAATCATGTAATTTAAAAAATAAAAATAAAAAAGTCAAAATTTCTTGTCATGTGATCGTTTTTATTTAGACAACTAGTGGGCTATACAAGCAAAGATAGGTGTAGTCCATATAACACCTAAATGTTTGTACAATAACAAAACTTAAAATATAAAGACGAAAATAGTATTTTTAACCTACTATTTTAGTCTCGTTCAAGTTCTTTTTAATACAAAAAGGAAAAAAAAAAACACAAGTTTAGGTTGGTTTTTGAATTTCATGTTTCATTTTAGTCTCTAAGTTTTTTAAAAACAACTATTCTATTGTTTATTATGTTAATCTTTTCATTTAATTTTCATTTGTTTAATGCTTGTTTATGACTTATGCATCTTGAAATTATACTTGAAAGTTATATCATTAATTTACCCCCAAAAAAAATAATAATAAACTAAGATGATTATTTTTACAAAAATTAAGAGATTAAAATTTTACTATGATTGTTTTCGTATTAAAAAAATTAATAATGTCATTCTTATAATTAGCAATACTCATCCAATATTTTCCAATCTTTGTTTTGAAATTTAGTTCTGAAAATTTGCATGTAAAATTATTATAGTATTTATTTATTAATATAAAAGTGATAGTGACATTGAAGGGTTGTTTTGTGTGTTTTCAGTTGGTGGAAGCATTAGCAGTGGAGGACCAAACCAAGCATCGGTCGTATTCATCGGACAATTGATATTTCTCTTCTTAAGCATTCTTCACTTAATTCTAAGCCATTATTGAAATGTATTAACTAAAAATATATTTCCAAAAAAAAAAAATCGATTGAGGTTTGTAAACTTAGAACTTTCAAAAGTATCTAAAGTATATTATTTATCTTTCAA AGTTCATAATTGTTCCTCGAAATTCTCAATTCCTTGCTCTGAGCTGTTCTCCTTTTCCTCCTTCAAAATCAAATAATCAAACCTTCCATTGAGTTTTTCTCATTACCAGAAATTATTGCTTTTCATGAACTCCATGGCGTCGCTACCGCTTTCCGCCATCTCCGGCCACCGGAATCTCAAATTTCCATGGCCGCTACTCTTCTTACTACCATTACTTTTACCTAAATCTCTCACATTCGCCTCACCTTGCCGGACATCCTGCGGCAACATTCCTATCAAATACCCCTTCGGAATCGACGACGGCTGCGGAGCGCCTCAATTCCGCCATATGTTCAATTGCTCCACCGATCTCTTCTTCCTCACTCCCTCCGGCAGTTACAAAGTACAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCAGCGATGTCGACTTGCTCCATCCTTCAACCGCACCACGATTTTACCATGACCGACATCCAATCGATCATCATTCCGCCGTCACCAGACACCGTCTTCGCTCTCCTAAACTGCTCGATCGATTCTCCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCCGGCCATTCCTGCGATGAACTCTACGGCGCCTGTAACGCGTTCCGAGTGTTCCATCTGTTGACGAACAGTACTTCGCCGCCGTGCTGTTTCACTGAATACGATACGGTGAAGTTGATGAGTATGAACATTCTGGATTGCACGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAAGGAGTAGGGGCTTTGGATTGGGAATACGGTATGAAATTGAGCTTTGCGGTTACGGATTTGGGATGCGATCGGTGCTTGAAATCGGGAGGAAGCTGTGGATTTGATACTGAAACGGAAGGATTGTTGTGCCTCTGCTCCATTTCTTCTAATCATACTAGGGATTGCGTTGGTGGAAGCATTAGCAGTGGAGGACCAAACCAAGCATCGGTCGTATTCATCGGACAATTGATATTTCTCTTCTTAAGCATTCTTCACTTAATTCTAAGCCATTATTGAAATGTATTAACTAAAAATATATTTCCAAAAAAAAAAAATCGATTGAGGTTTGTAAACTTAGAACTTTCAAAAGTATCTAAAGTATATTATTTATCTTTCAA ATGAACTCCATGGCGTCGCTACCGCTTTCCGCCATCTCCGGCCACCGGAATCTCAAATTTCCATGGCCGCTACTCTTCTTACTACCATTACTTTTACCTAAATCTCTCACATTCGCCTCACCTTGCCGGACATCCTGCGGCAACATTCCTATCAAATACCCCTTCGGAATCGACGACGGCTGCGGAGCGCCTCAATTCCGCCATATGTTCAATTGCTCCACCGATCTCTTCTTCCTCACTCCCTCCGGCAGTTACAAAGTACAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCAGCGATGTCGACTTGCTCCATCCTTCAACCGCACCACGATTTTACCATGACCGACATCCAATCGATCATCATTCCGCCGTCACCAGACACCGTCTTCGCTCTCCTAAACTGCTCGATCGATTCTCCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCCGGCCATTCCTGCGATGAACTCTACGGCGCCTGTAACGCGTTCCGAGTGTTCCATCTGTTGACGAACAGTACTTCGCCGCCGTGCTGTTTCACTGAATACGATACGGTGAAGTTGATGAGTATGAACATTCTGGATTGCACGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAAGGAGTAGGGGCTTTGGATTGGGAATACGGTATGAAATTGAGCTTTGCGGTTACGGATTTGGGATGCGATCGGTGCTTGAAATCGGGAGGAAGCTGTGGATTTGATACTGAAACGGAAGGATTGTTGTGCCTCTGCTCCATTTCTTCTAATCATACTAGGGATTGCGTTGGTGGAAGCATTAGCAGTGGAGGACCAAACCAAGCATCGGTCGTATTCATCGGACAATTGATATTTCTCTTCTTAAGCATTCTTCACTTAATTCTAAGCCATTATTGA MNSMASLPLSAISGHRNLKFPWPLLFLLPLLLPKSLTFASPCRTSCGNIPIKYPFGIDDGCGAPQFRHMFNCSTDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFTMTDIQSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSTSPPCCFTEYDTVKLMSMNILDCTHYTTVLNSENLKGVGALDWEYGMKLSFAVTDLGCDRCLKSGGSCGFDTETEGLLCLCSISSNHTRDCVGGSISSGGPNQASVVFIGQLIFLFLSILHLILSHY
BLAST of Lsi05G013930 vs. TrEMBL
Match: A0A0A0L5Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171060 PE=4 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 1.4e-155 Identity = 262/301 (87.04%), Postives = 276/301 (91.69%), Query Frame = 1
BLAST of Lsi05G013930 vs. TrEMBL
Match: A0A0B2P6M2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004273 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 6.3e-119 Identity = 200/261 (76.63%), Postives = 225/261 (86.21%), Query Frame = 1
BLAST of Lsi05G013930 vs. TrEMBL
Match: I1MRW3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G038600 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 6.3e-119 Identity = 200/261 (76.63%), Postives = 225/261 (86.21%), Query Frame = 1
BLAST of Lsi05G013930 vs. TrEMBL
Match: A0A0B2R8R3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_023990 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.4e-118 Identity = 200/261 (76.63%), Postives = 223/261 (85.44%), Query Frame = 1
BLAST of Lsi05G013930 vs. TrEMBL
Match: I1KMJ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G233600 PE=4 SV=2) HSP 1 Score: 434.1 bits (1115), Expect = 1.4e-118 Identity = 200/261 (76.63%), Postives = 223/261 (85.44%), Query Frame = 1
BLAST of Lsi05G013930 vs. TAIR10
Match: AT3G17350.1 (AT3G17350.1 unknown protein) HSP 1 Score: 374.8 bits (961), Expect = 5.1e-104 Identity = 173/280 (61.79%), Postives = 220/280 (78.57%), Query Frame = 1
BLAST of Lsi05G013930 vs. TAIR10
Match: AT5G50290.1 (AT5G50290.1 unknown protein) HSP 1 Score: 156.8 bits (395), Expect = 2.2e-38 Identity = 97/293 (33.11%), Postives = 151/293 (51.54%), Query Frame = 1
BLAST of Lsi05G013930 vs. TAIR10
Match: AT1G10380.1 (AT1G10380.1 Putative membrane lipoprotein) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32 Identity = 89/264 (33.71%), Postives = 121/264 (45.83%), Query Frame = 1
BLAST of Lsi05G013930 vs. TAIR10
Match: AT1G11915.1 (AT1G11915.1 unknown protein) HSP 1 Score: 128.3 bits (321), Expect = 8.4e-30 Identity = 91/267 (34.08%), Postives = 121/267 (45.32%), Query Frame = 1
BLAST of Lsi05G013930 vs. NCBI nr
Match: gi|659077009|ref|XP_008438983.1| (PREDICTED: uncharacterized protein LOC103483914 [Cucumis melo]) HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-158 Identity = 269/302 (89.07%), Postives = 282/302 (93.38%), Query Frame = 1
BLAST of Lsi05G013930 vs. NCBI nr
Match: gi|449459782|ref|XP_004147625.1| (PREDICTED: uncharacterized protein LOC101203503 [Cucumis sativus]) HSP 1 Score: 557.0 bits (1434), Expect = 2.1e-155 Identity = 262/301 (87.04%), Postives = 276/301 (91.69%), Query Frame = 1
BLAST of Lsi05G013930 vs. NCBI nr
Match: gi|734319207|gb|KHN03247.1| (hypothetical protein glysoja_004273 [Glycine soja]) HSP 1 Score: 435.3 bits (1118), Expect = 9.1e-119 Identity = 200/261 (76.63%), Postives = 225/261 (86.21%), Query Frame = 1
BLAST of Lsi05G013930 vs. NCBI nr
Match: gi|734393441|gb|KHN28172.1| (hypothetical protein glysoja_023990 [Glycine soja]) HSP 1 Score: 434.1 bits (1115), Expect = 2.0e-118 Identity = 200/261 (76.63%), Postives = 223/261 (85.44%), Query Frame = 1
BLAST of Lsi05G013930 vs. NCBI nr
Match: gi|920689402|gb|KOM33385.1| (hypothetical protein LR48_Vigan01g294100 [Vigna angularis]) HSP 1 Score: 433.3 bits (1113), Expect = 3.5e-118 Identity = 205/278 (73.74%), Postives = 232/278 (83.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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