Cucsa.252230 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.252230
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Wall-associated receptor kinase galacturonan-binding domain-containing protein
Location	scaffold02229 : 1181454 .. 1182418 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGAAGTTCCAAATTCCTTCCTCTGAGCTGTTCTCCTCTTCCTCCTCCAAAATCAAAATAATCCACCATTCCAATTTCCATTCAGTTTCTCATTTTACTAGAAAACATAACTATTTCCATGGCGTCGCCACCGTTTTCTGCCATCTTCGTTCACCAGAATCTCACATTTTCATGGTCATTGCTTCTCTTCCTACTACCACCACTAATACTTTCACCTTCCCTCGTATTCGCCTCACCTTGCCGTACTTCCTGCGGCAACATTCCGATTAAATACCCCTTCGGAATCGACGACGGCTGCGGAGCACCTCAATTTCGTCGCATGTTCAATTGCTCCAACGATCTTTTTTTCCTCACTCCTTCCGGTAGCTATAAAGTACAATCCATCGATTACGACAAACAATCCATGGTGATCTACGATCCAGCAATGTCTACCTGCTCAATCCTCCAACCGCATCACGATTTCATCATGACGGACATTCAATCAATCATAATTCCGCCATCGCCAGATACAGTCTTCGCTCTCCTCAACTGCTCGATCGATTCTCCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCCGGCCATTCATGCGACGAACTGTACGGAAGTTGCAACGCGTTCAGAGTGTTCCATTTGTTGGCGAACAGTACATCGCCGCCATGCTGTTTTACGGGATACGATACGGTGAAGATGATGAGTATGAACATTTTGGATTGTACGCATTACACGACGGTGTTGAATACGGAGAATCTGAAGGGAGTAGGGGCTTTGGATTGGGAATATGGAATGAAATTGAGCTTTTCGGTTGCGGATTTGGGATGTGATCGGTGTTCGAAATCGGGAGGAAATTGTGGATTTGATACGGAAACGGAAGGATTGTTGTGCCTTTGCTCCGTTTCTTCTAATCATACTAGAGATTGCGGTAAGGCTCTTTTGCATCACATTGTCATTTCTTGA

mRNA sequence

CTCGAAGTTCCAAATTCCTTCCTCTGAGCTGTTCTCCTCTTCCTCCTCCAAAATCAAAATAATCCACCATTCCAATTTCCATTCAGTTTCTCATTTTACTAGAAAACATAACTATTTCCATGGCGTCGCCACCGTTTTCTGCCATCTTCGTTCACCAGAATCTCACATTTTCATGGTCATTGCTTCTCTTCCTACTACCACCACTAATACTTTCACCTTCCCTCGTATTCGCCTCACCTTGCCGTACTTCCTGCGGCAACATTCCGATTAAATACCCCTTCGGAATCGACGACGGCTGCGGAGCACCTCAATTTCGTCGCATGTTCAATTGCTCCAACGATCTTTTTTTCCTCACTCCTTCCGGTAGCTATAAAGTACAATCCATCGATTACGACAAACAATCCATGGTGATCTACGATCCAGCAATGTCTACCTGCTCAATCCTCCAACCGCATCACGATTTCATCATGACGGACATTCAATCAATCATAATTCCGCCATCGCCAGATACAGTCTTCGCTCTCCTCAACTGCTCGATCGATTCTCCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCCGGCCATTCATGCGACGAACTGTACGGAAGTTGCAACGCGTTCAGAGTGTTCCATTTGTTGGCGAACAGTACATCGCCGCCATGCTGTTTTACGGGATACGATACGGTGAAGATGATGAGTATGAACATTTTGGATTGTACGCATTACACGACGGTGTTGAATACGGAGAATCTGAAGGGAGTAGGGGCTTTGGATTGGGAATATGGAATGAAATTGAGCTTTTCGGTTGCGGATTTGGGATGTGATCGGTGTTCGAAATCGGGAGGAAATTGTGGATTTGATACGGAAACGGAAGGATTGTTGTGCCTTTGCTCCGTTTCTTCTAATCATACTAGAGATTGCGGTAAGGCTCTTTTGCATCACATTGTCATTTCTTGA

Coding sequence (CDS)

ATGGCGTCGCCACCGTTTTCTGCCATCTTCGTTCACCAGAATCTCACATTTTCATGGTCATTGCTTCTCTTCCTACTACCACCACTAATACTTTCACCTTCCCTCGTATTCGCCTCACCTTGCCGTACTTCCTGCGGCAACATTCCGATTAAATACCCCTTCGGAATCGACGACGGCTGCGGAGCACCTCAATTTCGTCGCATGTTCAATTGCTCCAACGATCTTTTTTTCCTCACTCCTTCCGGTAGCTATAAAGTACAATCCATCGATTACGACAAACAATCCATGGTGATCTACGATCCAGCAATGTCTACCTGCTCAATCCTCCAACCGCATCACGATTTCATCATGACGGACATTCAATCAATCATAATTCCGCCATCGCCAGATACAGTCTTCGCTCTCCTCAACTGCTCGATCGATTCTCCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCCGGCCATTCATGCGACGAACTGTACGGAAGTTGCAACGCGTTCAGAGTGTTCCATTTGTTGGCGAACAGTACATCGCCGCCATGCTGTTTTACGGGATACGATACGGTGAAGATGATGAGTATGAACATTTTGGATTGTACGCATTACACGACGGTGTTGAATACGGAGAATCTGAAGGGAGTAGGGGCTTTGGATTGGGAATATGGAATGAAATTGAGCTTTTCGGTTGCGGATTTGGGATGTGATCGGTGTTCGAAATCGGGAGGAAATTGTGGATTTGATACGGAAACGGAAGGATTGTTGTGCCTTTGCTCCGTTTCTTCTAATCATACTAGAGATTGCGGTAAGGCTCTTTTGCATCACATTGTCATTTCTTGA

Protein sequence

MASPPFSAIFVHQNLTFSWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCGFDTETEGLLCLCSVSSNHTRDCGKALLHHIVIS*

Homology

[Close]

BLAST of Cucsa.252230 vs. TrEMBL
Match: A0A0A0L5Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171060 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 1.5e-159
Identity = 267/270 (98.89%), Postives = 267/270 (98.89%), Query Frame = 1


Query: 1   MASPPFSAIFVHQNLTFSWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGC 60
           MASPPFS IF HQNLTFSWSLLLFLLPPLILSPSLVFASPCR SCGNIPIKYPFGIDDGC
Sbjct: 1   MASPPFSVIFGHQNLTFSWSLLLFLLPPLILSPSLVFASPCRNSCGNIPIKYPFGIDDGC 60

Query: 61  GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI 120
           GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI
Sbjct: 61  GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI 120

Query: 121 QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST 180
           QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST
Sbjct: 121 QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST 180

Query: 181 SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC 240
           SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC
Sbjct: 181 SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC 240

Query: 241 SKSGGNCGFDTETEGLLCLCSVSSNHTRDC 271
           SKSGGNCGFDTETEGLLCLCSVSSNHTRDC
Sbjct: 241 SKSGGNCGFDTETEGLLCLCSVSSNHTRDC 270

[Close]

BLAST of Cucsa.252230 vs. TrEMBL
Match: B9RZX9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1002880 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 3.5e-116
Identity = 198/256 (77.34%), Postives = 226/256 (88.28%), Query Frame = 1


Query: 15  LTFSWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSND 74
           LTF +SL+L  L    L PSL   S CRTSCG + I+YPFG+DDGCGAPQFR MFNCSND
Sbjct: 10  LTF-FSLILTTLTLQSL-PSLALTS-CRTSCGRVDIRYPFGVDDGCGAPQFRGMFNCSND 69

Query: 75  LFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFA 134
           LFF+TPSGSYKVQ IDY+K+++ +YDPAMSTCSILQPHHDF+M+DIQS +IPP+PDTVFA
Sbjct: 70  LFFITPSGSYKVQQIDYEKKTIEVYDPAMSTCSILQPHHDFVMSDIQSSMIPPTPDTVFA 129

Query: 135 LLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFTGYDTVKM 194
           LLNCSIDSP+LNHYK LCFNFSGHSCDELYGSCNAFRVFHLL NS SPPCCFTGYDTV+ 
Sbjct: 130 LLNCSIDSPVLNHYKNLCFNFSGHSCDELYGSCNAFRVFHLLTNS-SPPCCFTGYDTVRY 189

Query: 195 MSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCGFDTETE 254
           MSMNILDCTHYTTV+NT+NLKG+G LDW YG+KLS+S+ D GC+RCS+SGG CGFDTET 
Sbjct: 190 MSMNILDCTHYTTVVNTDNLKGIGPLDWVYGIKLSYSMPDTGCERCSQSGGTCGFDTETG 249

Query: 255 GLLCLCSVSSNHTRDC 271
           G+LCLCS S+N TR+C
Sbjct: 250 GMLCLCSSSTNATREC 261

[Close]

BLAST of Cucsa.252230 vs. TrEMBL
Match: A0A0S3R959_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G508400 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.9e-116
Identity = 197/251 (78.49%), Postives = 216/251 (86.06%), Query Frame = 1


Query: 20  SLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSNDLFFLT 79
           SL L ++P L LS     +SPC+TSCG+IPI YPFG++DGCGAPQFR M NCS DLFF T
Sbjct: 21  SLQLQVIPTLTLS-----SSPCKTSCGSIPINYPFGLEDGCGAPQFRHMLNCSTDLFFQT 80

Query: 80  PSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFALLNCS 139
           PSGSYKVQSIDY+K SMV+YDPAMSTCSILQPHHDF MTDIQS IIPPS DTVF LLNCS
Sbjct: 81  PSGSYKVQSIDYEKNSMVVYDPAMSTCSILQPHHDFQMTDIQSAIIPPSQDTVFVLLNCS 140

Query: 140 IDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFTGYDTVKMMSMNI 199
           IDSP+LNHYKYLCFNF+GH+CDELYG+CNAFRVFHLL NS SPPCCFT Y TVK MSMNI
Sbjct: 141 IDSPVLNHYKYLCFNFAGHTCDELYGACNAFRVFHLLTNS-SPPCCFTTYGTVKFMSMNI 200

Query: 200 LDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCGFDTETEGLLCL 259
           LDCTHYT+V+NTENLKGVG LDW YG+KLSFSV D GC+ C KSGG CGFDT+TEGLLCL
Sbjct: 201 LDCTHYTSVINTENLKGVGPLDWVYGIKLSFSVPDTGCESCKKSGGTCGFDTDTEGLLCL 260

Query: 260 CSVSSNHTRDC 271
           CS  +N TR C
Sbjct: 261 CSSFANSTRQC 265

[Close]

BLAST of Cucsa.252230 vs. TrEMBL
Match: A0A0L9TS67_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g294100 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.9e-116
Identity = 197/251 (78.49%), Postives = 216/251 (86.06%), Query Frame = 1


Query: 20  SLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSNDLFFLT 79
           SL L ++P L LS     +SPC+TSCG+IPI YPFG++DGCGAPQFR M NCS DLFF T
Sbjct: 21  SLQLQVIPTLTLS-----SSPCKTSCGSIPINYPFGLEDGCGAPQFRHMLNCSTDLFFQT 80

Query: 80  PSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFALLNCS 139
           PSGSYKVQSIDY+K SMV+YDPAMSTCSILQPHHDF MTDIQS IIPPS DTVF LLNCS
Sbjct: 81  PSGSYKVQSIDYEKNSMVVYDPAMSTCSILQPHHDFQMTDIQSAIIPPSQDTVFVLLNCS 140

Query: 140 IDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFTGYDTVKMMSMNI 199
           IDSP+LNHYKYLCFNF+GH+CDELYG+CNAFRVFHLL NS SPPCCFT Y TVK MSMNI
Sbjct: 141 IDSPVLNHYKYLCFNFAGHTCDELYGACNAFRVFHLLTNS-SPPCCFTTYGTVKFMSMNI 200

Query: 200 LDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCGFDTETEGLLCL 259
           LDCTHYT+V+NTENLKGVG LDW YG+KLSFSV D GC+ C KSGG CGFDT+TEGLLCL
Sbjct: 201 LDCTHYTSVINTENLKGVGPLDWVYGIKLSFSVPDTGCESCKKSGGTCGFDTDTEGLLCL 260

Query: 260 CSVSSNHTRDC 271
           CS  +N TR C
Sbjct: 261 CSSFANSTRQC 265

[Close]

BLAST of Cucsa.252230 vs. TrEMBL
Match: A0A0B2R8R3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_023990 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.8e-115
Identity = 195/250 (78.00%), Postives = 216/250 (86.40%), Query Frame = 1


Query: 21  LLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSNDLFFLTP 80
           L+L LL  L ++P+L   SPC+TSCGNIPI YPFG++DGCGAPQFR M NCS DLFF TP
Sbjct: 12  LILTLLFQLQVTPTLTL-SPCKTSCGNIPINYPFGLEDGCGAPQFRHMLNCSTDLFFQTP 71

Query: 81  SGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFALLNCSI 140
           SGSYKVQSIDYDK++MVIYDP+MSTCSILQPHHDF MT +QS IIPPS DTVF LLNCSI
Sbjct: 72  SGSYKVQSIDYDKKTMVIYDPSMSTCSILQPHHDFEMTQVQSAIIPPSQDTVFVLLNCSI 131

Query: 141 DSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFTGYDTVKMMSMNIL 200
           DSP+LNHYKYLCFNF+GH+CDELYGSCNAFRVFHLL NS SPPCCFT Y TVK MSMNIL
Sbjct: 132 DSPVLNHYKYLCFNFAGHTCDELYGSCNAFRVFHLLTNS-SPPCCFTSYSTVKFMSMNIL 191

Query: 201 DCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCGFDTETEGLLCLC 260
           DCTHYT+V NT+NLKGVG LDW YG+KLSFSV D GC  C +SGG CGFDT+TEGLLCLC
Sbjct: 192 DCTHYTSVFNTDNLKGVGPLDWVYGIKLSFSVPDTGCQSCKESGGTCGFDTDTEGLLCLC 251

Query: 261 SVSSNHTRDC 271
           S  +N TR+C
Sbjct: 252 SSFANSTREC 259

[Close]

BLAST of Cucsa.252230 vs. TAIR10
Match: AT3G17350.1 (AT3G17350.1 unknown protein)

HSP 1 Score: 360.9 bits (925), Expect = 7.1e-100
Identity = 169/264 (64.02%), Postives = 206/264 (78.03%), Query Frame = 1


Query: 16  TFSWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSNDL 75
           +F +++     PPL  S     A+ CRT CGNIPI YPFGID GCG+PQ+R MFNCS DL
Sbjct: 10  SFLYTITTLTFPPLTTSA----ATSCRTLCGNIPINYPFGIDGGCGSPQYRGMFNCSTDL 69

Query: 76  FFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFAL 135
           +F TPSGSYKVQSIDY+K++MVI+DPAMSTCSILQPHHDF M DIQ+ +I PS DTVFAL
Sbjct: 70  YFTTPSGSYKVQSIDYEKKTMVIFDPAMSTCSILQPHHDFKMADIQNTLIRPSYDTVFAL 129

Query: 136 LNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLA----NS---TSPPCCFTG 195
            NCS DSP+ N Y+ LCFN +GHSCDELY SC +FR+F+  +    NS   T+P CCFT 
Sbjct: 130 FNCSNDSPVHNRYRNLCFNAAGHSCDELYSSCTSFRIFNTTSPYGNNSTVHTTPYCCFTN 189

Query: 196 YDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCG 255
           YDTV++MSMNILDC+HYTTV++   ++GVG LDW YG++LS+SV ++GCDRC KSGG CG
Sbjct: 190 YDTVRVMSMNILDCSHYTTVIDNGKMRGVGPLDWSYGIELSYSVTEIGCDRCRKSGGTCG 249

Query: 256 FDTETEGLLCLCSVSSNH-TRDCG 272
           FD ETE  LC CS S+N+ TR+CG
Sbjct: 250 FDAETEIFLCQCSGSNNNPTRECG 269

[Close]

BLAST of Cucsa.252230 vs. TAIR10
Match: AT5G50290.1 (AT5G50290.1 unknown protein)

HSP 1 Score: 157.9 bits (398), Expect = 9.1e-39
Identity = 94/270 (34.81%), Postives = 141/270 (52.22%), Query Frame = 1


Query: 22  LLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSND-LFFLTP 81
           +L L+   +    +     CR+ CGNI + YPFGI +GCG P +R +  C ND L F   
Sbjct: 3   ILILILSFVTLFEICVVDACRSYCGNITVDYPFGIRNGCGHPGYRDLLFCMNDVLMFHIS 62

Query: 82  SGSYKVQSIDYDKQSMVIYDPAMSTCSIL---QPHHDFIMTDIQSIIIPPSPDTVFALLN 141
           SGSY+V  IDY  QS+ ++DP MS C  +      + F   D ++    P+ D VF L+ 
Sbjct: 63  SGSYRVLDIDYAYQSITLHDPHMSNCETIVLGGKGNGFEAEDWRTPYFNPTSDNVFMLIG 122

Query: 142 CSIDSPILNHY---KYLCFNFSGHSCDELYGSCNA-----FRVFHLLANSTSPPCCFTGY 201
           CS  SPI   +   K  C N SG SC+E Y SC A     +R   + + S  P CC  G+
Sbjct: 123 CSPKSPIFQGFPEKKVPCRNISGMSCEE-YMSCPAWDMVGYRQPGIHSGSGPPMCCGVGF 182

Query: 202 DTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSV--ADLGCDRCSKSGGNC 261
           ++VK ++++ L+C  Y++  N   LK  G  DW YG+++ + +  +D  C  C  + G C
Sbjct: 183 ESVKAINLSKLECEGYSSAYNLAPLKLRGPSDWAYGIRVKYELQGSDAFCRACVATSGTC 242

Query: 262 GFDTETEGLL---CLCSVSSNHTRDCGKAL 275
           G++    G L   C+C  + N T +C   +
Sbjct: 243 GYEPADGGGLRHVCMCD-NHNSTTNCDSVI 270

[Close]

BLAST of Cucsa.252230 vs. TAIR10
Match: AT1G10380.1 (AT1G10380.1 Putative membrane lipoprotein)

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 95/270 (35.19%), Postives = 128/270 (47.41%), Query Frame = 1


Query: 18  SWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSND--- 77
           S S  +FL     LS S V +  C+ +CG IPIKYP G   GCG P+F R   C  D   
Sbjct: 7   SSSFFIFLFSFFFLS-SHVSSQACQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQT 66

Query: 78  LFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFA 137
           L   T +GSY + S+DY KQ + + DP+MSTC+  +P H F +            DTVF 
Sbjct: 67  LTLTTHTGSYPITSVDYAKQEIYVTDPSMSTCACTRPSHGFGLD--WDAPFSFHDDTVFT 126

Query: 138 LLNCSID-SPILNHYK------YLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFT 197
           LL+CS+D SP+            LC   S   C  LY +C A  + +L     S  C + 
Sbjct: 127 LLDCSVDESPVFTPLSNGSGRVSLCDRQSSSICTFLYSNCRAISLINL---QVSTCCVYV 186

Query: 198 GYDTVKM--MSMNILDCTHYTTVLNTENLKGVGALDWEYG--MKLSFSVADL---GCDRC 257
             D      M +N L C+ Y+   N    +     +W YG  +K  F+V D     C  C
Sbjct: 187 PLDLGPSFEMDLNKLKCSSYSGFYNLGPGQESHPENWNYGIALKYKFNVFDEYPGVCGSC 246

Query: 258 SKSGGNCGFDTETEGLLCLCSVSSNHTRDC 271
            +S G CGF+T++   +C C    N T DC
Sbjct: 247 ERSNGACGFNTQSSSFVCNCPGGINTTSDC 270

[Close]

BLAST of Cucsa.252230 vs. TAIR10
Match: AT1G11915.1 (AT1G11915.1 unknown protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28
Identity = 87/278 (31.29%), Postives = 128/278 (46.04%), Query Frame = 1


Query: 18  SWSLLLFLLPPLILSPSLVFASP--CRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSND- 77
           S+ +   LL  ++L  S   +    CR+SCGNIPI YPF IDDGCG+P +R M  CS++ 
Sbjct: 6   SYIIFFSLLMTILLQSSTTSSQSNLCRSSCGNIPINYPFSIDDGCGSPYYRHMLICSDND 65

Query: 78  --LFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTC---SILQPHHDFIMTDIQSIIIPPSP 137
             L   TPSG Y V+SI Y    +++ DP M  C      +P   F +       + P  
Sbjct: 66  TKLELRTPSGKYPVKSISYSDPHLLVSDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSPQN 125

Query: 138 DTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHL----LANSTSPPCC 197
           D +F   NC+ D  I+      C  F    CD    S +++   HL     A  +   CC
Sbjct: 126 DYLF--FNCNTDKVIVEPKPLFCERFPDR-CDSSCDS-SSYLCRHLPECGSALGSRVSCC 185

Query: 198 FTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDW--EYGMKLSF----SVADLGCDR 257
                  + + + + DC  YT+V            D   EYG+++ +    ++  L C  
Sbjct: 186 SYYPKATQSLRLMLQDCATYTSVYWRSTGVENAPYDQFPEYGIRVDYEFPVTMKCLLCQE 245

Query: 258 CSKSGGNCGFDTETEGLLCLCSVSSNHTRDCGKALLHH 278
            +K GG CGF+T T   LCLC   +  T     +L++H
Sbjct: 246 TTKGGGVCGFNTRTRDFLCLCKQGNVTTYCKDPSLVNH 279

[Close]

BLAST of Cucsa.252230 vs. NCBI nr
Match: gi|449459782|ref|XP_004147625.1| (PREDICTED: uncharacterized protein LOC101203503 [Cucumis sativus])

HSP 1 Score: 570.1 bits (1468), Expect = 2.2e-159
Identity = 267/270 (98.89%), Postives = 267/270 (98.89%), Query Frame = 1


Query: 1   MASPPFSAIFVHQNLTFSWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGC 60
           MASPPFS IF HQNLTFSWSLLLFLLPPLILSPSLVFASPCR SCGNIPIKYPFGIDDGC
Sbjct: 1   MASPPFSVIFGHQNLTFSWSLLLFLLPPLILSPSLVFASPCRNSCGNIPIKYPFGIDDGC 60

Query: 61  GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI 120
           GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI
Sbjct: 61  GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI 120

Query: 121 QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST 180
           QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST
Sbjct: 121 QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST 180

Query: 181 SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC 240
           SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC
Sbjct: 181 SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC 240

Query: 241 SKSGGNCGFDTETEGLLCLCSVSSNHTRDC 271
           SKSGGNCGFDTETEGLLCLCSVSSNHTRDC
Sbjct: 241 SKSGGNCGFDTETEGLLCLCSVSSNHTRDC 270

[Close]

BLAST of Cucsa.252230 vs. NCBI nr
Match: gi|659077009|ref|XP_008438983.1| (PREDICTED: uncharacterized protein LOC103483914 [Cucumis melo])

HSP 1 Score: 557.4 bits (1435), Expect = 1.5e-155
Identity = 259/270 (95.93%), Postives = 264/270 (97.78%), Query Frame = 1


Query: 1   MASPPFSAIFVHQNLTFSWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGC 60
           MASPPFSAIF H+N+TF WSLLL LLPPL+LSPSL FASPCRTSCGNIPIKYPFGIDDGC
Sbjct: 53  MASPPFSAIFGHRNVTFPWSLLLLLLPPLLLSPSLTFASPCRTSCGNIPIKYPFGIDDGC 112

Query: 61  GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI 120
           GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYD+QSMVIYDPAMSTCSILQPHHDF MTDI
Sbjct: 113 GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDEQSMVIYDPAMSTCSILQPHHDFTMTDI 172

Query: 121 QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST 180
           QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLL NST
Sbjct: 173 QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLTNST 232

Query: 181 SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC 240
           SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVA+LGCDRC
Sbjct: 233 SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVANLGCDRC 292

Query: 241 SKSGGNCGFDTETEGLLCLCSVSSNHTRDC 271
           SKSGGNCGFDTETEGLLCLCSVSSNHTRDC
Sbjct: 293 SKSGGNCGFDTETEGLLCLCSVSSNHTRDC 322

[Close]

BLAST of Cucsa.252230 vs. NCBI nr
Match: gi|764573671|ref|XP_004298267.2| (PREDICTED: uncharacterized protein LOC101298600 [Fragaria vesca subsp. vesca])

HSP 1 Score: 428.7 bits (1101), Expect = 7.8e-117
Identity = 193/254 (75.98%), Postives = 220/254 (86.61%), Query Frame = 1


Query: 18  SWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSNDLFF 77
           +++LLL LLP L LS        CR SCG+I I YPFG+DDGCGAPQFRRM NCS DLFF
Sbjct: 133 NFTLLLSLLPTLTLSQ-------CRDSCGDISINYPFGLDDGCGAPQFRRMLNCSTDLFF 192

Query: 78  LTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFALLN 137
           LTPSGSYKV+SI+YDK+++V+YDPAMSTCSILQPHHDF+MTDIQS +IPP+ DTVFALLN
Sbjct: 193 LTPSGSYKVESINYDKKTIVVYDPAMSTCSILQPHHDFLMTDIQSALIPPTSDTVFALLN 252

Query: 138 CSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFTGYDTVKMMSM 197
           CSIDSP+LNHY YLCFNFS HSCDELYGSCNAFRVFH++AN+TSPPCCFT YDTVK MSM
Sbjct: 253 CSIDSPVLNHYSYLCFNFSSHSCDELYGSCNAFRVFHMMANTTSPPCCFTSYDTVKFMSM 312

Query: 198 NILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCGFDTETEGLL 257
           N+LDCTHYTTV NT+ L G+G  DW YG+K+SF+V D GCDRC+ SGG CGFDTETEG L
Sbjct: 313 NVLDCTHYTTVTNTDGLSGIGPQDWVYGIKMSFAVPDSGCDRCAASGGTCGFDTETEGQL 372

Query: 258 CLCSVSSNHTRDCG 272
           CLCS SSN+TR+CG
Sbjct: 373 CLCSSSSNYTRECG 379

[Close]

BLAST of Cucsa.252230 vs. NCBI nr
Match: gi|223541613|gb|EEF43162.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 426.0 bits (1094), Expect = 5.1e-116
Identity = 198/256 (77.34%), Postives = 226/256 (88.28%), Query Frame = 1


Query: 15  LTFSWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSND 74
           LTF +SL+L  L    L PSL   S CRTSCG + I+YPFG+DDGCGAPQFR MFNCSND
Sbjct: 10  LTF-FSLILTTLTLQSL-PSLALTS-CRTSCGRVDIRYPFGVDDGCGAPQFRGMFNCSND 69

Query: 75  LFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFA 134
           LFF+TPSGSYKVQ IDY+K+++ +YDPAMSTCSILQPHHDF+M+DIQS +IPP+PDTVFA
Sbjct: 70  LFFITPSGSYKVQQIDYEKKTIEVYDPAMSTCSILQPHHDFVMSDIQSSMIPPTPDTVFA 129

Query: 135 LLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFTGYDTVKM 194
           LLNCSIDSP+LNHYK LCFNFSGHSCDELYGSCNAFRVFHLL NS SPPCCFTGYDTV+ 
Sbjct: 130 LLNCSIDSPVLNHYKNLCFNFSGHSCDELYGSCNAFRVFHLLTNS-SPPCCFTGYDTVRY 189

Query: 195 MSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCGFDTETE 254
           MSMNILDCTHYTTV+NT+NLKG+G LDW YG+KLS+S+ D GC+RCS+SGG CGFDTET 
Sbjct: 190 MSMNILDCTHYTTVVNTDNLKGIGPLDWVYGIKLSYSMPDTGCERCSQSGGTCGFDTETG 249

Query: 255 GLLCLCSVSSNHTRDC 271
           G+LCLCS S+N TR+C
Sbjct: 250 GMLCLCSSSTNATREC 261

[Close]

BLAST of Cucsa.252230 vs. NCBI nr
Match: gi|1000966364|ref|XP_002519298.2| (PREDICTED: uncharacterized protein LOC8261323 [Ricinus communis])

HSP 1 Score: 426.0 bits (1094), Expect = 5.1e-116
Identity = 198/256 (77.34%), Postives = 226/256 (88.28%), Query Frame = 1


Query: 15  LTFSWSLLLFLLPPLILSPSLVFASPCRTSCGNIPIKYPFGIDDGCGAPQFRRMFNCSND 74
           LTF +SL+L  L    L PSL   S CRTSCG + I+YPFG+DDGCGAPQFR MFNCSND
Sbjct: 20  LTF-FSLILTTLTLQSL-PSLALTS-CRTSCGRVDIRYPFGVDDGCGAPQFRGMFNCSND 79

Query: 75  LFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDIQSIIIPPSPDTVFA 134
           LFF+TPSGSYKVQ IDY+K+++ +YDPAMSTCSILQPHHDF+M+DIQS +IPP+PDTVFA
Sbjct: 80  LFFITPSGSYKVQQIDYEKKTIEVYDPAMSTCSILQPHHDFVMSDIQSSMIPPTPDTVFA 139

Query: 135 LLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANSTSPPCCFTGYDTVKM 194
           LLNCSIDSP+LNHYK LCFNFSGHSCDELYGSCNAFRVFHLL NS SPPCCFTGYDTV+ 
Sbjct: 140 LLNCSIDSPVLNHYKNLCFNFSGHSCDELYGSCNAFRVFHLLTNS-SPPCCFTGYDTVRY 199

Query: 195 MSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRCSKSGGNCGFDTETE 254
           MSMNILDCTHYTTV+NT+NLKG+G LDW YG+KLS+S+ D GC+RCS+SGG CGFDTET 
Sbjct: 200 MSMNILDCTHYTTVVNTDNLKGIGPLDWVYGIKLSYSMPDTGCERCSQSGGTCGFDTETG 259

Query: 255 GLLCLCSVSSNHTRDC 271
           G+LCLCS S+N TR+C
Sbjct: 260 GMLCLCSSSTNATREC 271

The following BLAST results are available for this feature:

BLAST of Cucsa.252230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5Z5_CUCSA	1.5e-159	98.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171060 PE=4 SV=1	[more]
B9RZX9_RICCO	3.5e-116	77.34	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1002880 PE=4 SV=1	[more]
A0A0S3R959_PHAAN	7.9e-116	78.49	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G508400 PE=...	[more]
A0A0L9TS67_PHAAN	7.9e-116	78.49	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g294100 PE=4 SV=1	[more]
A0A0B2R8R3_GLYSO	1.8e-115	78.00	Uncharacterized protein OS=Glycine soja GN=glysoja_023990 PE=4 SV=1	[more]

BLAST of Cucsa.252230 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17350.1	7.1e-100	64.02	unknown protein	[more]
AT5G50290.1	9.1e-39	34.81	unknown protein	[more]
AT1G10380.1	2.3e-34	35.19	Putative membrane lipoprotein	[more]
AT1G11915.1	1.9e-28	31.29	unknown protein	[more]

BLAST of Cucsa.252230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459782\|ref\|XP_004147625.1\|	2.2e-159	98.89	PREDICTED: uncharacterized protein LOC101203503 [Cucumis sativus]	[more]
gi\|659077009\|ref\|XP_008438983.1\|	1.5e-155	95.93	PREDICTED: uncharacterized protein LOC103483914 [Cucumis melo]	[more]
gi\|764573671\|ref\|XP_004298267.2\|	7.8e-117	75.98	PREDICTED: uncharacterized protein LOC101298600 [Fragaria vesca subsp. vesca]	[more]
gi\|223541613\|gb\|EEF43162.1\|	5.1e-116	77.34	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000966364\|ref\|XP_002519298.2\|	5.1e-116	77.34	PREDICTED: uncharacterized protein LOC8261323 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025287	WAK_GUB

Vocabulary: **Molecular Function**
Term	Definition
GO:0030247	polysaccharide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0030247	polysaccharide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.252230.1	Cucsa.252230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025287	Wall-associated receptor kinase, galacturonan-binding domain	PFAM	PF13947	GUB_WAK_bind	coord: 40..139 score: 4.0
None	No IPR available	PANTHER	PTHR33355	FAMILY NOT NAMED	coord: 6..271 score: 1.7E
None	No IPR available	PANTHER	PTHR33355:SF6	SUBFAMILY NOT NAMED	coord: 6..271 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.252230	Cla021822	Watermelon (97103) v1	cgywmB479
Cucsa.252230	Csa3G171060	Cucumber (Chinese Long) v2	cgycuB366
Cucsa.252230	MELO3C006745	Melon (DHL92) v3.5.1	cgymeB439
Cucsa.252230	ClCG05G006810	Watermelon (Charleston Gray)	cgywcgB451
Cucsa.252230	CSPI03G15290	Wild cucumber (PI 183967)	cgycpiB383
Cucsa.252230	CmaCh14G015670	Cucurbita maxima (Rimu)	cgycmaB0709
Cucsa.252230	CmoCh14G016020	Cucurbita moschata (Rifu)	cgycmoB0700
Cucsa.252230	Lsi05G013930	Bottle gourd (USVL1VR-Ls)	cgylsiB416
Cucsa.252230	Cp4.1LG03g11970	Cucurbita pepo (Zucchini)	cgycpeB0682
Cucsa.252230	MELO3C031621.2	Melon (DHL92) v3.6.1	cgymedB432
Cucsa.252230	CsaV3_3G015460	Cucumber (Chinese Long) v3	cgycucB387
Cucsa.252230	Cla97C05G088430	Watermelon (97103) v2	cgywmbB452
Cucsa.252230	Bhi01G000812	Wax gourd	cgywgoB522
Cucsa.252230	Carg19603	Silver-seed gourd	carcgyB0329

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.252230	Wax gourd	cgywgoB512
Cucsa.252230	Cucurbita maxima (Rimu)	cgycmaB0727
Cucsa.252230	Cucurbita moschata (Rifu)	cgycmoB0707
Cucsa.252230	Cucurbita moschata (Rifu)	cgycmoB0718
Cucsa.252230	Melon (DHL92) v3.5.1	cgymeB430
Cucsa.252230	Watermelon (Charleston Gray)	cgywcgB453
Cucsa.252230	Cucurbita pepo (Zucchini)	cgycpeB0687
Cucsa.252230	Melon (DHL92) v3.6.1	cgymedB425
Cucsa.252230	Silver-seed gourd	carcgyB0833