Cp4.1LG03g11970 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG03g11970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionWall-associated receptor kinase-like 20
LocationCp4.1LG03 : 10609571 .. 10611405 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGACACGTGTCACAATCGCACTCTTGATAGCAGCGGACTTGTGATTGTGCAGCACTCACTTTCCAACAACAAGTGAGCTAAGCTAATTCGTTCTTACGTCGCCTACGGTTAAGCGACGTATGCTCGAGCCTCTGGCCTCGGTTTAAGAGAAGGTTTTAGAAAATGAGGGCAAAGGAAGATTTTCGAAAGAGAGATTTTGAAAGAGACGTTATATAAAGAAGCAAGAGAGGAACAACCTCGGGTTCACAGGTAGAGGATGAGCTAACCTTGAAAAGTTGATTTGGAAGAGATGGAGGAAACACCGCAATTTGAGTCCATAATTGTCCCTCGAAATTCTCACTTCTCTTGAGCTGAGCTGTTTTCCTCCTTCAAAATCAAATAAATCAACCGTTCTATTCAATTTATCATTACCAGAAATTTTTACTTTGATGAACTCCATGGCGTCGCTACCTCTTTCCGCCGTCTCCGGCCACCGGAATCTCACATTTCCATGCCTCCTACTCCTCCTACTACCGGCAACACTACTTTTACCTTCTCTCACTTTCGCCTCACCTTGCCGGACCTCCTGCGGCAACATTCCGATCAAATACCCCTTCGGAGTCGACGACGGCTGCGGAGCGCCTCAGTTCCGGCGCATGTTCAATTGCTCCACAGATCTCTTCTTCCTCACTCCCTCCGGCACTTACAAAGTCCAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCGGCCATGTCGACCTGCTCCATCCTTCAACCGCATCACGACTTCGTCATGACCGATATCCAATCGATCATCATGCCGCCAACGCCGGACACCGTGTTCGCTCTCCTCAATTGCTCGATCGATTCACCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCTGGCCATTCCTGCGACGAACTCTACGGCGCCTGCAACGCCTTCCGAGTCTTCCATCTGTTGACGAACAGTTCGCCTCCGTGCTGTTTCACTGGATACGATACTGTGAAGTTCATGAGTATGAACATTCTGGATTGCTCGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAGGGCGTAGGGGCTCTGGATTGGGATTACGGGATGAAATTGAGCTTCTCCGTTCCGGATTTAGGATGCGATCGGTGTTCAAAATCGGGAGGAACTTGTGGATTTGATACTGAAACCGAAGGATTGTCGTGCCTCTGCTCCATTTCCTCTAATCATACCAGAGATTGCGGTAAGCCCTCCCCCTGCGATGCATATATATATATTTTATTTATTTATTTATTTATTTATTTATTTATTATTATTATTTTGCTAGCCATTTAACAATAGTTAATTTTTATACAACAAATATGTTTTTTAAAAATATAAATTTTAGTTATTTTATTATTATTATTTGCGAACAATTAACCATAATTAATTTTTTTTTATACAACAAATATACAAACAATTTTTTTTAAAAATCACTATTTTAGTTTTTATTATGATTATTATTAGCTAGCCATTTACCAATAAATATGTTTAAAAACAAATTCTTCCATTTAAAATATAAAAGTGATAATGATATTAAAATGTTTTATTTGTGTGTGTTTTTTTTTTCAGTTGGTGGAAATATTACGAGTGGAGGACGAAATGAAGCATTCTCAGTATTCATATTTATTTTCTTATTTGGTATTATTCGGGTGATTTTAAGCCATTATTGAAGTTATTAGGATTAAAATGTGGAGTATTTAATGACTATGAGTAATTAGTTTGTTATTATTTGGTTTTTTTTTTGTTTGTTTTATTTTGTTTAAAGTAAATTGTTAACATTTATTTATTTATCT

mRNA sequence

GTGACACGTGTCACAATCGCACTCTTGATAGCAGCGGACTTGTGATTGTGCAGCACTCACTTTCCAACAACAAGTGAGCTAAGCTAATTCGTTCTTACGTCGCCTACGGTTAAGCGACGTATGCTCGAGCCTCTGGCCTCGGTTTAAGAGAAGGTTTTAGAAAATGAGGGCAAAGGAAGATTTTCGAAAGAGAGATTTTGAAAGAGACGTTATATAAAGAAGCAAGAGAGGAACAACCTCGGGTTCACAGGTAGAGGATGAGCTAACCTTGAAAAGTTGATTTGGAAGAGATGGAGGAAACACCGCAATTTGAGTCCATAATTGTCCCTCGAAATTCTCACTTCTCTTGAGCTGAGCTGTTTTCCTCCTTCAAAATCAAATAAATCAACCGTTCTATTCAATTTATCATTACCAGAAATTTTTACTTTGATGAACTCCATGGCGTCGCTACCTCTTTCCGCCGTCTCCGGCCACCGGAATCTCACATTTCCATGCCTCCTACTCCTCCTACTACCGGCAACACTACTTTTACCTTCTCTCACTTTCGCCTCACCTTGCCGGACCTCCTGCGGCAACATTCCGATCAAATACCCCTTCGGAGTCGACGACGGCTGCGGAGCGCCTCAGTTCCGGCGCATGTTCAATTGCTCCACAGATCTCTTCTTCCTCACTCCCTCCGGCACTTACAAAGTCCAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCGGCCATGTCGACCTGCTCCATCCTTCAACCGCATCACGACTTCGTCATGACCGATATCCAATCGATCATCATGCCGCCAACGCCGGACACCGTGTTCGCTCTCCTCAATTGCTCGATCGATTCACCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCTGGCCATTCCTGCGACGAACTCTACGGCGCCTGCAACGCCTTCCGAGTCTTCCATCTGTTGACGAACAGTTCGCCTCCGTGCTGTTTCACTGGATACGATACTGTGAAGTTCATGAGTATGAACATTCTGGATTGCTCGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAGGGCGTAGGGGCTCTGGATTGGGATTACGGGATGAAATTGAGCTTCTCCGTTCCGGATTTAGGATGCGATCGGTGTTCAAAATCGGGAGGAACTTGTGGATTTGATACTGAAACCGAAGGATTGTCGTGCCTCTGCTCCATTTCCTCTAATCATACCAGAGATTGCGTTGGTGGAAATATTACGAGTGGAGGACGAAATGAAGCATTCTCAGTATTCATATTTATTTTCTTATTTGGTATTATTCGGGTGATTTTAAGCCATTATTGAAGTTATTAGGATTAAAATGTGGAGTATTTAATGACTATGAGTAATTAGTTTGTTATTATTTGGTTTTTTTTTTGTTTGTTTTATTTTGTTTAAAGTAAATTGTTAACATTTATTTATTTATCT

Coding sequence (CDS)

ATGAACTCCATGGCGTCGCTACCTCTTTCCGCCGTCTCCGGCCACCGGAATCTCACATTTCCATGCCTCCTACTCCTCCTACTACCGGCAACACTACTTTTACCTTCTCTCACTTTCGCCTCACCTTGCCGGACCTCCTGCGGCAACATTCCGATCAAATACCCCTTCGGAGTCGACGACGGCTGCGGAGCGCCTCAGTTCCGGCGCATGTTCAATTGCTCCACAGATCTCTTCTTCCTCACTCCCTCCGGCACTTACAAAGTCCAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCGGCCATGTCGACCTGCTCCATCCTTCAACCGCATCACGACTTCGTCATGACCGATATCCAATCGATCATCATGCCGCCAACGCCGGACACCGTGTTCGCTCTCCTCAATTGCTCGATCGATTCACCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCTGGCCATTCCTGCGACGAACTCTACGGCGCCTGCAACGCCTTCCGAGTCTTCCATCTGTTGACGAACAGTTCGCCTCCGTGCTGTTTCACTGGATACGATACTGTGAAGTTCATGAGTATGAACATTCTGGATTGCTCGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAGGGCGTAGGGGCTCTGGATTGGGATTACGGGATGAAATTGAGCTTCTCCGTTCCGGATTTAGGATGCGATCGGTGTTCAAAATCGGGAGGAACTTGTGGATTTGATACTGAAACCGAAGGATTGTCGTGCCTCTGCTCCATTTCCTCTAATCATACCAGAGATTGCGTTGGTGGAAATATTACGAGTGGAGGACGAAATGAAGCATTCTCAGTATTCATATTTATTTTCTTATTTGGTATTATTCGGGTGATTTTAAGCCATTATTGA

Protein sequence

MNSMASLPLSAVSGHRNLTFPCLLLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDLFFLTPSGTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDCSHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGLSCLCSISSNHTRDCVGGNITSGGRNEAFSVFIFIFLFGIIRVILSHY
BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: A0A0A0L5Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171060 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 2.4e-147
Identity = 251/299 (83.95%), Postives = 271/299 (90.64%), Query Frame = 1

Query: 4   MASLPLSAVSGHRNLTFP-CLLLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGC 63
           MAS P S + GH+NLTF   LLL LLP  +L PSL FASPCR SCGNIPIKYPFG+DDGC
Sbjct: 1   MASPPFSVIFGHQNLTFSWSLLLFLLPPLILSPSLVFASPCRNSCGNIPIKYPFGIDDGC 60

Query: 64  GAPQFRRMFNCSTDLFFLTPSGTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDI 123
           GAPQFRRMFNCS DLFFLTPSG+YKVQSIDYDKQSMVIYDPAMSTCSILQPHHDF+MTDI
Sbjct: 61  GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI 120

Query: 124 QSIIMPPTPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNS- 183
           QSII+PP+PDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYG+CNAFRVFHLL NS 
Sbjct: 121 QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST 180

Query: 184 SPPCCFTGYDTVKFMSMNILDCSHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRC 243
           SPPCCFTGYDTVK MSMNILDC+HYTTVLN+ENLKGVGALDW+YGMKLSFSV DLGCDRC
Sbjct: 181 SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC 240

Query: 244 SKSGGTCGFDTETEGLSCLCSISSNHTRDCVGGNITSGGRNEAFSVFIFIFLFGIIRVI 301
           SKSGG CGFDTETEGL CLCS+SSNHTRDCVGGNI +GG N+A  +FI  FLF ++ ++
Sbjct: 241 SKSGGNCGFDTETEGLLCLCSVSSNHTRDCVGGNIPNGGPNQASVLFIGEFLFLLLAIL 299

BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: B9HX90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16270g PE=4 SV=2)

HSP 1 Score: 446.4 bits (1147), Expect = 2.7e-122
Identity = 199/267 (74.53%), Postives = 232/267 (86.89%), Query Frame = 1

Query: 24  LLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDLFFLTPS 83
           L + +  TL  P     +PCRTSCG+I I YPFG+DDGCGAPQFR M NCSTDLFFLTPS
Sbjct: 12  LSIFIIVTLQPPPALSLTPCRTSCGSIAINYPFGIDDGCGAPQFRSMLNCSTDLFFLTPS 71

Query: 84  GTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSID 143
           G YKVQ IDYDK++M IYDPAMSTCSILQPHHDF+MTDIQS+ +PPTPDTVFALLNCSID
Sbjct: 72  GGYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTIPPTPDTVFALLNCSID 131

Query: 144 SPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDC 203
           SP+LNHYK LCF+FSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFM MNILDC
Sbjct: 132 SPVLNHYKNLCFDFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMRMNILDC 191

Query: 204 SHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGLSCLCSI 263
           +HYTTV+N++NL+G+G LDW YG+KLSF+VP+ GC+RCS+SGGTCG+DTETE ++CLCS 
Sbjct: 192 THYTTVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCSQSGGTCGYDTETEVMTCLCSS 251

Query: 264 SSNHTRDCVGGNITSGGRNEAFSVFIF 291
           S+N+TR+C GG+ T+G    + S + F
Sbjct: 252 STNYTRECAGGSFTAGDHRSSHSPWTF 278

BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: A9PCR1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 6.1e-122
Identity = 198/261 (75.86%), Postives = 229/261 (87.74%), Query Frame = 1

Query: 24  LLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDLFFLTPS 83
           L + +  TL  P     +PCRTSCG+I I YPFG+DDGCGAPQFR M NCSTDLFFLTPS
Sbjct: 12  LSIFIIVTLQPPPALSLTPCRTSCGSIAINYPFGIDDGCGAPQFRSMLNCSTDLFFLTPS 71

Query: 84  GTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSID 143
           G YKVQ IDYDK++M IYDPAMSTCSILQPHHDF+MTDIQS+ +PPTPDTVFALLNCSID
Sbjct: 72  GGYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTIPPTPDTVFALLNCSID 131

Query: 144 SPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDC 203
           SP+LNHYK LCF+FSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFM MNILDC
Sbjct: 132 SPVLNHYKNLCFDFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMRMNILDC 191

Query: 204 SHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGLSCLCSI 263
           +HYTTV+N++NL+G+G LDW YG+KLSF+VP+ GC+RCS+SGGTCG+DTETE ++CLCS 
Sbjct: 192 THYTTVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCSQSGGTCGYDTETEVMTCLCSS 251

Query: 264 SSNHTRDCVGGNITSGGRNEA 285
           S+N+TR+C GG+ T+G    A
Sbjct: 252 STNYTRECAGGSFTAGDHRAA 272

BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: B9HII5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s09920g PE=4 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 1.9e-120
Identity = 204/285 (71.58%), Postives = 240/285 (84.21%), Query Frame = 1

Query: 18  LTFPCLLLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDL 77
           +TF   + ++L  TL  P     +PCRTSCG+I I YPFG+DDGCGAPQFR M NCSTDL
Sbjct: 9   ITFKLSMFIIL--TLQPPPTLSLTPCRTSCGSIAINYPFGIDDGCGAPQFRHMLNCSTDL 68

Query: 78  FFLTPSGTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFAL 137
           FFLTPSG YKVQ IDYDK++M IYDPAMSTCSILQPHHDF+MTDIQS+ + PTPDTVFAL
Sbjct: 69  FFLTPSGGYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTISPTPDTVFAL 128

Query: 138 LNCSIDSPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMS 197
           LNCSIDSP+LNHYK LCF+FSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMS
Sbjct: 129 LNCSIDSPVLNHYKNLCFSFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMS 188

Query: 198 MNILDCSHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGL 257
           MNILDC+HYTTV+N+++L G+   DW YG+KLS+SVP+ GC+RCS+SGGTCG+DTETEG+
Sbjct: 189 MNILDCTHYTTVINTDSLMGIVPSDWVYGIKLSYSVPETGCERCSQSGGTCGYDTETEGM 248

Query: 258 SCLCSISSNHTRDCVGGNITSGGRNEAFSVFIFIFLFGIIRVILS 303
            CLCS SSN+TR+C GG++T+G    + S + F F   I+ V+ S
Sbjct: 249 MCLCSSSSNYTRECAGGSLTAGDHRSSHSPWTF-FNVAILLVLSS 290

BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: I1MRW3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G038600 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 5.7e-120
Identity = 204/281 (72.60%), Postives = 240/281 (85.41%), Query Frame = 1

Query: 18  LTFPCLLLLLLPATLLL---PSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCS 77
           L+ P  +  LL  TLLL   P+LT  SPC+T+CG+IPI YPFG++DGCGAPQFR M NCS
Sbjct: 6   LSSPFTIFKLLILTLLLQVIPTLTL-SPCKTTCGSIPINYPFGLEDGCGAPQFRHMLNCS 65

Query: 78  TDLFFLTPSGTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTV 137
           TDLFF TPSG+YKVQSIDYDK++MVIYDP+MSTCSILQPHHDF MTD+QS I+PP+ DTV
Sbjct: 66  TDLFFQTPSGSYKVQSIDYDKKTMVIYDPSMSTCSILQPHHDFQMTDVQSAIIPPSQDTV 125

Query: 138 FALLNCSIDSPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVK 197
           F LLNCSIDSP+LNHYKYLCFNF+GH+CDELYG+CNAFRVFHLLTNSSPPCCFT Y TVK
Sbjct: 126 FVLLNCSIDSPVLNHYKYLCFNFAGHTCDELYGSCNAFRVFHLLTNSSPPCCFTSYSTVK 185

Query: 198 FMSMNILDCSHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTET 257
           FMSMNILDC+HYT++ N++NLKGVG LDW YG+KLSFSVPD GC+ C KSGGTCGFDT+T
Sbjct: 186 FMSMNILDCTHYTSMFNTDNLKGVGPLDWVYGIKLSFSVPDTGCESCRKSGGTCGFDTDT 245

Query: 258 EGLSCLCSISSNHTRDCVGGNITSGGRNEA-FSVFIFIFLF 295
           EGL CLCS  +N TR+C  G+I S G+N A ++ ++ + LF
Sbjct: 246 EGLLCLCSSFANSTRECAAGSIISKGQNNAPWTHYLLVLLF 285

BLAST of Cp4.1LG03g11970 vs. TAIR10
Match: AT3G17350.1 (AT3G17350.1 unknown protein)

HSP 1 Score: 359.0 bits (920), Expect = 2.9e-99
Identity = 166/261 (63.60%), Postives = 205/261 (78.54%), Query Frame = 1

Query: 31  TLLLPSLTF--ASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDLFFLTPSGTYKV 90
           TL  P LT   A+ CRT CGNIPI YPFG+D GCG+PQ+R MFNCSTDL+F TPSG+YKV
Sbjct: 17  TLTFPPLTTSAATSCRTLCGNIPINYPFGIDGGCGSPQYRGMFNCSTDLYFTTPSGSYKV 76

Query: 91  QSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSIDSPILN 150
           QSIDY+K++MVI+DPAMSTCSILQPHHDF M DIQ+ ++ P+ DTVFAL NCS DSP+ N
Sbjct: 77  QSIDYEKKTMVIFDPAMSTCSILQPHHDFKMADIQNTLIRPSYDTVFALFNCSNDSPVHN 136

Query: 151 HYKYLCFNFSGHSCDELYGACNAFRVFHLLT--------NSSPPCCFTGYDTVKFMSMNI 210
            Y+ LCFN +GHSCDELY +C +FR+F+  +        +++P CCFT YDTV+ MSMNI
Sbjct: 137 RYRNLCFNAAGHSCDELYSSCTSFRIFNTTSPYGNNSTVHTTPYCCFTNYDTVRVMSMNI 196

Query: 211 LDCSHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGLSCL 270
           LDCSHYTTV+++  ++GVG LDW YG++LS+SV ++GCDRC KSGGTCGFD ETE   C 
Sbjct: 197 LDCSHYTTVIDNGKMRGVGPLDWSYGIELSYSVTEIGCDRCRKSGGTCGFDAETEIFLCQ 256

Query: 271 CSISSNH-TRDCVGGNITSGG 281
           CS S+N+ TR+C GG    GG
Sbjct: 257 CSGSNNNPTRECGGGMTDRGG 277

BLAST of Cp4.1LG03g11970 vs. TAIR10
Match: AT5G50290.1 (AT5G50290.1 unknown protein)

HSP 1 Score: 152.5 bits (384), Expect = 4.1e-37
Identity = 93/266 (34.96%), Postives = 142/266 (53.38%), Query Frame = 1

Query: 24  LLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTD-LFFLTP 83
           +L+L+ + + L  +     CR+ CGNI + YPFG+ +GCG P +R +  C  D L F   
Sbjct: 3   ILILILSFVTLFEICVVDACRSYCGNITVDYPFGIRNGCGHPGYRDLLFCMNDVLMFHIS 62

Query: 84  SGTYKVQSIDYDKQSMVIYDPAMSTCSIL---QPHHDFVMTDIQSIIMPPTPDTVFALLN 143
           SG+Y+V  IDY  QS+ ++DP MS C  +      + F   D ++    PT D VF L+ 
Sbjct: 63  SGSYRVLDIDYAYQSITLHDPHMSNCETIVLGGKGNGFEAEDWRTPYFNPTSDNVFMLIG 122

Query: 144 CSIDSPILNHY---KYLCFNFSGHSCDELYGACNA-----FRVFHLLTNSSPP-CCFTGY 203
           CS  SPI   +   K  C N SG SC+E Y +C A     +R   + + S PP CC  G+
Sbjct: 123 CSPKSPIFQGFPEKKVPCRNISGMSCEE-YMSCPAWDMVGYRQPGIHSGSGPPMCCGVGF 182

Query: 204 DTVKFMSMNILDCSHYTTVLNSENLKGVGALDWDYGMKLSFSV--PDLGCDRCSKSGGTC 263
           ++VK ++++ L+C  Y++  N   LK  G  DW YG+++ + +   D  C  C  + GTC
Sbjct: 183 ESVKAINLSKLECEGYSSAYNLAPLKLRGPSDWAYGIRVKYELQGSDAFCRACVATSGTC 242

Query: 264 GFDTETEG---LSCLCSISSNHTRDC 272
           G++    G     C+C  + N T +C
Sbjct: 243 GYEPADGGGLRHVCMCD-NHNSTTNC 266

BLAST of Cp4.1LG03g11970 vs. TAIR10
Match: AT1G10380.1 (AT1G10380.1 Putative membrane lipoprotein)

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-32
Identity = 89/263 (33.84%), Postives = 124/263 (47.15%), Query Frame = 1

Query: 26  LLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTD---LFFLTP 85
           + L +   L S   +  C+ +CG IPIKYP G   GCG P+F R   C  D   L   T 
Sbjct: 12  IFLFSFFFLSSHVSSQACQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTH 71

Query: 86  SGTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSI 145
           +G+Y + S+DY KQ + + DP+MSTC+  +P H F +            DTVF LL+CS+
Sbjct: 72  TGSYPITSVDYAKQEIYVTDPSMSTCACTRPSHGFGLD--WDAPFSFHDDTVFTLLDCSV 131

Query: 146 D-SPILNHYK------YLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKF 205
           D SP+            LC   S   C  LY  C A  + +L  ++   C +   D    
Sbjct: 132 DESPVFTPLSNGSGRVSLCDRQSSSICTFLYSNCRAISLINLQVSTC--CVYVPLDLGPS 191

Query: 206 --MSMNILDCSHYTTVLNSENLKGVGALDWDYG--MKLSFSVPDL---GCDRCSKSGGTC 265
             M +N L CS Y+   N    +     +W+YG  +K  F+V D     C  C +S G C
Sbjct: 192 FEMDLNKLKCSSYSGFYNLGPGQESHPENWNYGIALKYKFNVFDEYPGVCGSCERSNGAC 251

Query: 266 GFDTETEGLSCLCSISSNHTRDC 272
           GF+T++    C C    N T DC
Sbjct: 252 GFNTQSSSFVCNCPGGINTTSDC 270

BLAST of Cp4.1LG03g11970 vs. TAIR10
Match: AT1G11915.1 (AT1G11915.1 unknown protein)

HSP 1 Score: 125.6 bits (314), Expect = 5.4e-29
Identity = 89/269 (33.09%), Postives = 120/269 (44.61%), Query Frame = 1

Query: 23  LLLLLLPATLLLPSLTFASP---CRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCS---TD 82
           ++   L  T+LL S T +S    CR+SCGNIPI YPF +DDGCG+P +R M  CS   T 
Sbjct: 8   IIFFSLLMTILLQSSTTSSQSNLCRSSCGNIPINYPFSIDDGCGSPYYRHMLICSDNDTK 67

Query: 83  LFFLTPSGTYKVQSIDYDKQSMVIYDPAMSTC---SILQPHHDFVMTDIQSIIMPPTPDT 142
           L   TPSG Y V+SI Y    +++ DP M  C      +P   F +       + P  D 
Sbjct: 68  LELRTPSGKYPVKSISYSDPHLLVSDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSPQNDY 127

Query: 143 VFALLNCSIDSPILNHYKYLCFNFSGH---SCDELYGACNAFRVFHLLTNSSPPCCFTGY 202
           +F   NC+ D  I+      C  F      SCD     C           S   CC    
Sbjct: 128 LF--FNCNTDKVIVEPKPLFCERFPDRCDSSCDSSSYLCRHLPECGSALGSRVSCCSYYP 187

Query: 203 DTVKFMSMNILDCSHYTTVLNSENLKGVGALDWD----YGMKLSFSVP----DLGCDRCS 262
              + + + + DC+ YT+V       GV    +D    YG+++ +  P     L C   +
Sbjct: 188 KATQSLRLMLQDCATYTSVYWRST--GVENAPYDQFPEYGIRVDYEFPVTMKCLLCQETT 247

Query: 263 KSGGTCGFDTETEGLSCLCSISSNHTRDC 272
           K GG CGF+T T    CLC    N T  C
Sbjct: 248 KGGGVCGFNTRTRDFLCLCK-QGNVTTYC 271

BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|659077009|ref|XP_008438983.1| (PREDICTED: uncharacterized protein LOC103483914 [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 2.0e-150
Identity = 257/300 (85.67%), Postives = 277/300 (92.33%), Query Frame = 1

Query: 3   SMASLPLSAVSGHRNLTFP-CLLLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDG 62
           SMAS P SA+ GHRN+TFP  LLLLLLP  LL PSLTFASPCRTSCGNIPIKYPFG+DDG
Sbjct: 52  SMASPPFSAIFGHRNVTFPWSLLLLLLPPLLLSPSLTFASPCRTSCGNIPIKYPFGIDDG 111

Query: 63  CGAPQFRRMFNCSTDLFFLTPSGTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTD 122
           CGAPQFRRMFNCS DLFFLTPSG+YKVQSIDYD+QSMVIYDPAMSTCSILQPHHDF MTD
Sbjct: 112 CGAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDEQSMVIYDPAMSTCSILQPHHDFTMTD 171

Query: 123 IQSIIMPPTPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNS 182
           IQSII+PP+PDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYG+CNAFRVFHLLTNS
Sbjct: 172 IQSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLTNS 231

Query: 183 -SPPCCFTGYDTVKFMSMNILDCSHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDR 242
            SPPCCFTGYDTVK MSMNILDC+HYTTVLN+ENLKGVGALDW+YGMKLSFSV +LGCDR
Sbjct: 232 TSPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVANLGCDR 291

Query: 243 CSKSGGTCGFDTETEGLSCLCSISSNHTRDCVGGNITSGGRNEAFSVFIFIFLFGIIRVI 301
           CSKSGG CGFDTETEGL CLCS+SSNHTRDCVGGNI +GG N+A  +FI  F+F I+ ++
Sbjct: 292 CSKSGGNCGFDTETEGLLCLCSVSSNHTRDCVGGNIPNGGPNQASVLFIGEFIFSILIIL 351

BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|449459782|ref|XP_004147625.1| (PREDICTED: uncharacterized protein LOC101203503 [Cucumis sativus])

HSP 1 Score: 529.6 bits (1363), Expect = 3.5e-147
Identity = 251/299 (83.95%), Postives = 271/299 (90.64%), Query Frame = 1

Query: 4   MASLPLSAVSGHRNLTFP-CLLLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGC 63
           MAS P S + GH+NLTF   LLL LLP  +L PSL FASPCR SCGNIPIKYPFG+DDGC
Sbjct: 1   MASPPFSVIFGHQNLTFSWSLLLFLLPPLILSPSLVFASPCRNSCGNIPIKYPFGIDDGC 60

Query: 64  GAPQFRRMFNCSTDLFFLTPSGTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDI 123
           GAPQFRRMFNCS DLFFLTPSG+YKVQSIDYDKQSMVIYDPAMSTCSILQPHHDF+MTDI
Sbjct: 61  GAPQFRRMFNCSNDLFFLTPSGSYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFIMTDI 120

Query: 124 QSIIMPPTPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNS- 183
           QSII+PP+PDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYG+CNAFRVFHLL NS 
Sbjct: 121 QSIIIPPSPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGSCNAFRVFHLLANST 180

Query: 184 SPPCCFTGYDTVKFMSMNILDCSHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRC 243
           SPPCCFTGYDTVK MSMNILDC+HYTTVLN+ENLKGVGALDW+YGMKLSFSV DLGCDRC
Sbjct: 181 SPPCCFTGYDTVKMMSMNILDCTHYTTVLNTENLKGVGALDWEYGMKLSFSVADLGCDRC 240

Query: 244 SKSGGTCGFDTETEGLSCLCSISSNHTRDCVGGNITSGGRNEAFSVFIFIFLFGIIRVI 301
           SKSGG CGFDTETEGL CLCS+SSNHTRDCVGGNI +GG N+A  +FI  FLF ++ ++
Sbjct: 241 SKSGGNCGFDTETEGLLCLCSVSSNHTRDCVGGNIPNGGPNQASVLFIGEFLFLLLAIL 299

BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|566191117|ref|XP_002314989.2| (hypothetical protein POPTR_0010s16270g [Populus trichocarpa])

HSP 1 Score: 446.4 bits (1147), Expect = 3.9e-122
Identity = 199/267 (74.53%), Postives = 232/267 (86.89%), Query Frame = 1

Query: 24  LLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDLFFLTPS 83
           L + +  TL  P     +PCRTSCG+I I YPFG+DDGCGAPQFR M NCSTDLFFLTPS
Sbjct: 12  LSIFIIVTLQPPPALSLTPCRTSCGSIAINYPFGIDDGCGAPQFRSMLNCSTDLFFLTPS 71

Query: 84  GTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSID 143
           G YKVQ IDYDK++M IYDPAMSTCSILQPHHDF+MTDIQS+ +PPTPDTVFALLNCSID
Sbjct: 72  GGYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTIPPTPDTVFALLNCSID 131

Query: 144 SPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDC 203
           SP+LNHYK LCF+FSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFM MNILDC
Sbjct: 132 SPVLNHYKNLCFDFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMRMNILDC 191

Query: 204 SHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGLSCLCSI 263
           +HYTTV+N++NL+G+G LDW YG+KLSF+VP+ GC+RCS+SGGTCG+DTETE ++CLCS 
Sbjct: 192 THYTTVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCSQSGGTCGYDTETEVMTCLCSS 251

Query: 264 SSNHTRDCVGGNITSGGRNEAFSVFIF 291
           S+N+TR+C GG+ T+G    + S + F
Sbjct: 252 STNYTRECAGGSFTAGDHRSSHSPWTF 278

BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|118484581|gb|ABK94164.1| (unknown [Populus trichocarpa])

HSP 1 Score: 445.3 bits (1144), Expect = 8.7e-122
Identity = 198/261 (75.86%), Postives = 229/261 (87.74%), Query Frame = 1

Query: 24  LLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDLFFLTPS 83
           L + +  TL  P     +PCRTSCG+I I YPFG+DDGCGAPQFR M NCSTDLFFLTPS
Sbjct: 12  LSIFIIVTLQPPPALSLTPCRTSCGSIAINYPFGIDDGCGAPQFRSMLNCSTDLFFLTPS 71

Query: 84  GTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSID 143
           G YKVQ IDYDK++M IYDPAMSTCSILQPHHDF+MTDIQS+ +PPTPDTVFALLNCSID
Sbjct: 72  GGYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTIPPTPDTVFALLNCSID 131

Query: 144 SPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDC 203
           SP+LNHYK LCF+FSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFM MNILDC
Sbjct: 132 SPVLNHYKNLCFDFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMRMNILDC 191

Query: 204 SHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGLSCLCSI 263
           +HYTTV+N++NL+G+G LDW YG+KLSF+VP+ GC+RCS+SGGTCG+DTETE ++CLCS 
Sbjct: 192 THYTTVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCSQSGGTCGYDTETEVMTCLCSS 251

Query: 264 SSNHTRDCVGGNITSGGRNEA 285
           S+N+TR+C GG+ T+G    A
Sbjct: 252 STNYTRECAGGSFTAGDHRAA 272

BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|743798744|ref|XP_011011427.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105115997 [Populus euphratica])

HSP 1 Score: 443.4 bits (1139), Expect = 3.3e-121
Identity = 196/261 (75.10%), Postives = 230/261 (88.12%), Query Frame = 1

Query: 24  LLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDLFFLTPS 83
           L + +  TL  P     SPCRTSCG+I I YPFG+DDGCGAPQFR M NCSTDLFFLTPS
Sbjct: 12  LSIFIIVTLQPPPALSLSPCRTSCGSIAINYPFGIDDGCGAPQFRSMLNCSTDLFFLTPS 71

Query: 84  GTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSID 143
           G YKVQ IDYDK++M IYDPAMSTCSILQPHHDF+MTDIQS+ +PPTPDTVFALLNCSID
Sbjct: 72  GGYKVQHIDYDKKTMTIYDPAMSTCSILQPHHDFIMTDIQSVTIPPTPDTVFALLNCSID 131

Query: 144 SPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDC 203
           SP+LNHYK LCF+FSGHSCDELYGACNAFRVFH LTNSSPPCCFTGYDTVKFM MNILDC
Sbjct: 132 SPVLNHYKNLCFDFSGHSCDELYGACNAFRVFHFLTNSSPPCCFTGYDTVKFMRMNILDC 191

Query: 204 SHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGLSCLCSI 263
           +HYT+V+N++NL+G+G LDW YG+KLSF+VP+ GC+RCS+SGGTCG+DTETE ++CLCS 
Sbjct: 192 THYTSVINTDNLRGIGPLDWVYGIKLSFTVPETGCERCSQSGGTCGYDTETEVMTCLCSS 251

Query: 264 SSNHTRDCVGGNITSGGRNEA 285
           ++N+TR+C GG++T+G +  A
Sbjct: 252 TTNYTRECAGGSLTAGDQRAA 272

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L5Z5_CUCSA2.4e-14783.95Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171060 PE=4 SV=1[more]
B9HX90_POPTR2.7e-12274.53Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16270g PE=4 SV=2[more]
A9PCR1_POPTR6.1e-12275.86Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
B9HII5_POPTR1.9e-12071.58Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s09920g PE=4 SV=2[more]
I1MRW3_SOYBN5.7e-12072.60Uncharacterized protein OS=Glycine max GN=GLYMA_17G038600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G17350.12.9e-9963.60 unknown protein[more]
AT5G50290.14.1e-3734.96 unknown protein[more]
AT1G10380.14.0e-3233.84 Putative membrane lipoprotein[more]
AT1G11915.15.4e-2933.09 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659077009|ref|XP_008438983.1|2.0e-15085.67PREDICTED: uncharacterized protein LOC103483914 [Cucumis melo][more]
gi|449459782|ref|XP_004147625.1|3.5e-14783.95PREDICTED: uncharacterized protein LOC101203503 [Cucumis sativus][more]
gi|566191117|ref|XP_002314989.2|3.9e-12274.53hypothetical protein POPTR_0010s16270g [Populus trichocarpa][more]
gi|118484581|gb|ABK94164.1|8.7e-12275.86unknown [Populus trichocarpa][more]
gi|743798744|ref|XP_011011427.1|3.3e-12175.10PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105115997 [Populus eu... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030247polysaccharide binding
Vocabulary: INTERPRO
TermDefinition
IPR025287WAK_GUB
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0030247 polysaccharide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g11970.1Cp4.1LG03g11970.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025287Wall-associated receptor kinase, galacturonan-binding domainPFAMPF13947GUB_WAK_bindcoord: 42..141
score: 2.8
NoneNo IPR availablePANTHERPTHR33355FAMILY NOT NAMEDcoord: 8..301
score: 3.7E
NoneNo IPR availablePANTHERPTHR33355:SF6SUBFAMILY NOT NAMEDcoord: 8..301
score: 3.7E