Cp4.1LG03g11970 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGACACGTGTCACAATCGCACTCTTGATAGCAGCGGACTTGTGATTGTGCAGCACTCACTTTCCAACAACAAGTGAGCTAAGCTAATTCGTTCTTACGTCGCCTACGGTTAAGCGACGTATGCTCGAGCCTCTGGCCTCGGTTTAAGAGAAGGTTTTAGAAAATGAGGGCAAAGGAAGATTTTCGAAAGAGAGATTTTGAAAGAGACGTTATATAAAGAAGCAAGAGAGGAACAACCTCGGGTTCACAGGTAGAGGATGAGCTAACCTTGAAAAGTTGATTTGGAAGAGATGGAGGAAACACCGCAATTTGAGTCCATAATTGTCCCTCGAAATTCTCACTTCTCTTGAGCTGAGCTGTTTTCCTCCTTCAAAATCAAATAAATCAACCGTTCTATTCAATTTATCATTACCAGAAATTTTTACTTTGATGAACTCCATGGCGTCGCTACCTCTTTCCGCCGTCTCCGGCCACCGGAATCTCACATTTCCATGCCTCCTACTCCTCCTACTACCGGCAACACTACTTTTACCTTCTCTCACTTTCGCCTCACCTTGCCGGACCTCCTGCGGCAACATTCCGATCAAATACCCCTTCGGAGTCGACGACGGCTGCGGAGCGCCTCAGTTCCGGCGCATGTTCAATTGCTCCACAGATCTCTTCTTCCTCACTCCCTCCGGCACTTACAAAGTCCAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCGGCCATGTCGACCTGCTCCATCCTTCAACCGCATCACGACTTCGTCATGACCGATATCCAATCGATCATCATGCCGCCAACGCCGGACACCGTGTTCGCTCTCCTCAATTGCTCGATCGATTCACCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCTGGCCATTCCTGCGACGAACTCTACGGCGCCTGCAACGCCTTCCGAGTCTTCCATCTGTTGACGAACAGTTCGCCTCCGTGCTGTTTCACTGGATACGATACTGTGAAGTTCATGAGTATGAACATTCTGGATTGCTCGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAGGGCGTAGGGGCTCTGGATTGGGATTACGGGATGAAATTGAGCTTCTCCGTTCCGGATTTAGGATGCGATCGGTGTTCAAAATCGGGAGGAACTTGTGGATTTGATACTGAAACCGAAGGATTGTCGTGCCTCTGCTCCATTTCCTCTAATCATACCAGAGATTGCGGTAAGCCCTCCCCCTGCGATGCATATATATATATTTTATTTATTTATTTATTTATTTATTTATTTATTATTATTATTTTGCTAGCCATTTAACAATAGTTAATTTTTATACAACAAATATGTTTTTTAAAAATATAAATTTTAGTTATTTTATTATTATTATTTGCGAACAATTAACCATAATTAATTTTTTTTTATACAACAAATATACAAACAATTTTTTTTAAAAATCACTATTTTAGTTTTTATTATGATTATTATTAGCTAGCCATTTACCAATAAATATGTTTAAAAACAAATTCTTCCATTTAAAATATAAAAGTGATAATGATATTAAAATGTTTTATTTGTGTGTGTTTTTTTTTTCAGTTGGTGGAAATATTACGAGTGGAGGACGAAATGAAGCATTCTCAGTATTCATATTTATTTTCTTATTTGGTATTATTCGGGTGATTTTAAGCCATTATTGAAGTTATTAGGATTAAAATGTGGAGTATTTAATGACTATGAGTAATTAGTTTGTTATTATTTGGTTTTTTTTTTGTTTGTTTTATTTTGTTTAAAGTAAATTGTTAACATTTATTTATTTATCT GTGACACGTGTCACAATCGCACTCTTGATAGCAGCGGACTTGTGATTGTGCAGCACTCACTTTCCAACAACAAGTGAGCTAAGCTAATTCGTTCTTACGTCGCCTACGGTTAAGCGACGTATGCTCGAGCCTCTGGCCTCGGTTTAAGAGAAGGTTTTAGAAAATGAGGGCAAAGGAAGATTTTCGAAAGAGAGATTTTGAAAGAGACGTTATATAAAGAAGCAAGAGAGGAACAACCTCGGGTTCACAGGTAGAGGATGAGCTAACCTTGAAAAGTTGATTTGGAAGAGATGGAGGAAACACCGCAATTTGAGTCCATAATTGTCCCTCGAAATTCTCACTTCTCTTGAGCTGAGCTGTTTTCCTCCTTCAAAATCAAATAAATCAACCGTTCTATTCAATTTATCATTACCAGAAATTTTTACTTTGATGAACTCCATGGCGTCGCTACCTCTTTCCGCCGTCTCCGGCCACCGGAATCTCACATTTCCATGCCTCCTACTCCTCCTACTACCGGCAACACTACTTTTACCTTCTCTCACTTTCGCCTCACCTTGCCGGACCTCCTGCGGCAACATTCCGATCAAATACCCCTTCGGAGTCGACGACGGCTGCGGAGCGCCTCAGTTCCGGCGCATGTTCAATTGCTCCACAGATCTCTTCTTCCTCACTCCCTCCGGCACTTACAAAGTCCAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCGGCCATGTCGACCTGCTCCATCCTTCAACCGCATCACGACTTCGTCATGACCGATATCCAATCGATCATCATGCCGCCAACGCCGGACACCGTGTTCGCTCTCCTCAATTGCTCGATCGATTCACCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCTGGCCATTCCTGCGACGAACTCTACGGCGCCTGCAACGCCTTCCGAGTCTTCCATCTGTTGACGAACAGTTCGCCTCCGTGCTGTTTCACTGGATACGATACTGTGAAGTTCATGAGTATGAACATTCTGGATTGCTCGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAGGGCGTAGGGGCTCTGGATTGGGATTACGGGATGAAATTGAGCTTCTCCGTTCCGGATTTAGGATGCGATCGGTGTTCAAAATCGGGAGGAACTTGTGGATTTGATACTGAAACCGAAGGATTGTCGTGCCTCTGCTCCATTTCCTCTAATCATACCAGAGATTGCGTTGGTGGAAATATTACGAGTGGAGGACGAAATGAAGCATTCTCAGTATTCATATTTATTTTCTTATTTGGTATTATTCGGGTGATTTTAAGCCATTATTGAAGTTATTAGGATTAAAATGTGGAGTATTTAATGACTATGAGTAATTAGTTTGTTATTATTTGGTTTTTTTTTTGTTTGTTTTATTTTGTTTAAAGTAAATTGTTAACATTTATTTATTTATCT ATGAACTCCATGGCGTCGCTACCTCTTTCCGCCGTCTCCGGCCACCGGAATCTCACATTTCCATGCCTCCTACTCCTCCTACTACCGGCAACACTACTTTTACCTTCTCTCACTTTCGCCTCACCTTGCCGGACCTCCTGCGGCAACATTCCGATCAAATACCCCTTCGGAGTCGACGACGGCTGCGGAGCGCCTCAGTTCCGGCGCATGTTCAATTGCTCCACAGATCTCTTCTTCCTCACTCCCTCCGGCACTTACAAAGTCCAATCCATCGATTACGACAAGCAATCCATGGTGATCTACGATCCGGCCATGTCGACCTGCTCCATCCTTCAACCGCATCACGACTTCGTCATGACCGATATCCAATCGATCATCATGCCGCCAACGCCGGACACCGTGTTCGCTCTCCTCAATTGCTCGATCGATTCACCGATCCTCAACCACTACAAGTACCTCTGCTTCAATTTCTCTGGCCATTCCTGCGACGAACTCTACGGCGCCTGCAACGCCTTCCGAGTCTTCCATCTGTTGACGAACAGTTCGCCTCCGTGCTGTTTCACTGGATACGATACTGTGAAGTTCATGAGTATGAACATTCTGGATTGCTCGCATTACACGACGGTGTTGAATTCGGAGAATCTGAAGGGCGTAGGGGCTCTGGATTGGGATTACGGGATGAAATTGAGCTTCTCCGTTCCGGATTTAGGATGCGATCGGTGTTCAAAATCGGGAGGAACTTGTGGATTTGATACTGAAACCGAAGGATTGTCGTGCCTCTGCTCCATTTCCTCTAATCATACCAGAGATTGCGTTGGTGGAAATATTACGAGTGGAGGACGAAATGAAGCATTCTCAGTATTCATATTTATTTTCTTATTTGGTATTATTCGGGTGATTTTAAGCCATTATTGA MNSMASLPLSAVSGHRNLTFPCLLLLLLPATLLLPSLTFASPCRTSCGNIPIKYPFGVDDGCGAPQFRRMFNCSTDLFFLTPSGTYKVQSIDYDKQSMVIYDPAMSTCSILQPHHDFVMTDIQSIIMPPTPDTVFALLNCSIDSPILNHYKYLCFNFSGHSCDELYGACNAFRVFHLLTNSSPPCCFTGYDTVKFMSMNILDCSHYTTVLNSENLKGVGALDWDYGMKLSFSVPDLGCDRCSKSGGTCGFDTETEGLSCLCSISSNHTRDCVGGNITSGGRNEAFSVFIFIFLFGIIRVILSHY
BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: A0A0A0L5Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171060 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 2.4e-147 Identity = 251/299 (83.95%), Postives = 271/299 (90.64%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: B9HX90_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16270g PE=4 SV=2) HSP 1 Score: 446.4 bits (1147), Expect = 2.7e-122 Identity = 199/267 (74.53%), Postives = 232/267 (86.89%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: A9PCR1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 6.1e-122 Identity = 198/261 (75.86%), Postives = 229/261 (87.74%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: B9HII5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s09920g PE=4 SV=2) HSP 1 Score: 440.3 bits (1131), Expect = 1.9e-120 Identity = 204/285 (71.58%), Postives = 240/285 (84.21%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. TrEMBL
Match: I1MRW3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G038600 PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 5.7e-120 Identity = 204/281 (72.60%), Postives = 240/281 (85.41%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. TAIR10
Match: AT3G17350.1 (AT3G17350.1 unknown protein) HSP 1 Score: 359.0 bits (920), Expect = 2.9e-99 Identity = 166/261 (63.60%), Postives = 205/261 (78.54%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. TAIR10
Match: AT5G50290.1 (AT5G50290.1 unknown protein) HSP 1 Score: 152.5 bits (384), Expect = 4.1e-37 Identity = 93/266 (34.96%), Postives = 142/266 (53.38%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. TAIR10
Match: AT1G10380.1 (AT1G10380.1 Putative membrane lipoprotein) HSP 1 Score: 136.0 bits (341), Expect = 4.0e-32 Identity = 89/263 (33.84%), Postives = 124/263 (47.15%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. TAIR10
Match: AT1G11915.1 (AT1G11915.1 unknown protein) HSP 1 Score: 125.6 bits (314), Expect = 5.4e-29 Identity = 89/269 (33.09%), Postives = 120/269 (44.61%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|659077009|ref|XP_008438983.1| (PREDICTED: uncharacterized protein LOC103483914 [Cucumis melo]) HSP 1 Score: 540.4 bits (1391), Expect = 2.0e-150 Identity = 257/300 (85.67%), Postives = 277/300 (92.33%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|449459782|ref|XP_004147625.1| (PREDICTED: uncharacterized protein LOC101203503 [Cucumis sativus]) HSP 1 Score: 529.6 bits (1363), Expect = 3.5e-147 Identity = 251/299 (83.95%), Postives = 271/299 (90.64%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|566191117|ref|XP_002314989.2| (hypothetical protein POPTR_0010s16270g [Populus trichocarpa]) HSP 1 Score: 446.4 bits (1147), Expect = 3.9e-122 Identity = 199/267 (74.53%), Postives = 232/267 (86.89%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|118484581|gb|ABK94164.1| (unknown [Populus trichocarpa]) HSP 1 Score: 445.3 bits (1144), Expect = 8.7e-122 Identity = 198/261 (75.86%), Postives = 229/261 (87.74%), Query Frame = 1
BLAST of Cp4.1LG03g11970 vs. NCBI nr
Match: gi|743798744|ref|XP_011011427.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105115997 [Populus euphratica]) HSP 1 Score: 443.4 bits (1139), Expect = 3.3e-121 Identity = 196/261 (75.10%), Postives = 230/261 (88.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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