Lsi05G011150 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACAATGAGCCGCCGAAGAAAATTCCATGAATCTTGAAGCTACTTCACCACACAACACGTATCTATGAATACACGTCGGTTTCTTCGCCGCTTCCTCCATCGGCCTGGTTTCTGATTGTCAATGGAAATAAACATTCGACCCCACATCTTCGTTTTATCCCTTTCTTCAATCGGTATCAATTTTCTTCTCCCTTTCTCCATTTTCCTCATCACACTTAGATTTTTTCTTCTTGAAAATATCTTTGTTTCTCTACGTTTTCAGATTTGATTGTTGCATTTGTCTATCTTTTCATAGTTTATGTTGCACAGCCAAATTTTCCATTTGGGTTTAGTGAAAGTGTGTTTGATTTATGGAAGTGGGTTTTCAGTATAATATTTAATTGTGATTTTAATTGGTTTATATGAGCTTTGCCATTTTCTTTCTTTCTATTGTTGGTTGCTCTGCTTGTAGATGATTTAAAAAGTTGCACTGAAGTGTTTGATTTTTTTACTCAATGAAATGAAAATGGGTTCCATTCTGAATTTCTGATTCTTTACTTGCATTATTTTGAACAGACTTCTTGGCCCTTGAAAATTTCCTTGGGCAAGATGGCTGAGGTATGATATAGTTTTAGTTTCACTTCAATCTTTACTTGAAAGGGGCCATGGCTCAAGCTCCACAGCCATTTCACTCTTAAATTCCTTTGACAATTGCCAACATGTAAAAATTGAGTTATTTTTATTTTGTTTGTGTTTGCAACTTCACAACACAAGGAGGAGTCTCACAGGGTTGTATTGAATTTATACGACCTTAGCTGTGGATTGGCTCGACAGTTCTCCACAGCATTGTTGGGGAAACCCATTGAAGGCATATGGTAAGTGTTGAGCTTTTTTAAGATATAATGCTGTTTAGATTATCATTAGCTTTGTTTACATGTATACTTTGATGAGTTGATCTTGTGAATCAAAATTTATAAGCCTCTTTTATGAGAAGTTCGGACAGTATAAATTGTGCTACTGTTGTGATATCATTATATATATAGTCTTTTCCTCCCTAACTTGAACTGGTGTTAGAAAAATAAGTATTACTTACCTCTACACTAGTATGATATACTCTTAACAGCACGTGAATTTGCTTTCAATTTATGTTCAAAAAGTCCGTGTAATAATATTCCTGATTGTTAAATGATATTGCTCTCTTGATAATTCTCAACTCAAAGTCAACTTGGCATATACCCTCAACCTAGAGGTCAGACGGTTTAATCCTCTGACATCACATGTCTTTGAACTCGAAGATAGTTCTCACCTCAAATAAACTGAACCTATCCTTCAATATTCATCTATATGCTAATTCTCTTCTACATTGATTTGATTGTTACCTCTTATTTATGTTAATCCTCAACTTCATAACCCAAATTCTGTCTGATGGAGCTCAACCGTGATTTCATTATGGGATAATCGGGGCTAAATAAGGATTCATATACCGTTCAACAACAAATTGCCTTGTAGGAGGATTTGCCAAAGAAGACGAATCCGTGGTAGGTTTCGGAATCTCAGTACTAGCCATGAGCGTTCAGCAAAGAAGACAACACATGAGAATGAAGAAACTCTATAGAGAGAACGAAATTTCAACTGATACCATATTACAACTTTGGAGAGTAAATTAAACTTGGGTGTGAATCTTATTGAAGGAGAGCTATATAAATAGCTAAAGAAGGATACAAGTGGAGTAACAGAAAAATAAACCGACTAACTAAAACAATTACTCAATATTATATACACTAATACTAACCATTTTTTGGTTGCACAATCCTCTACTTAAAAAGAGAATAATTGAACCTCTCTTCAAACAAATATGTAAGGTACCATCCATTCAAAAACAATCTATTGTGGATTATAATGATACAATTTTGTCCAGGTTTGCTAATATTCTCTAGTCAAAATACCCCATATATTGAAGATGTTGGGCTACAATTAACATATACTGATTTTGTGAGTGGTTGATTCTCTAATGCATTTCAGGCACACTGGGATTGTAGTGTATGACAATGAATACTACTATGGGGGTGGAATCCATCACAGTCTTTCTGGAAATACACCCTTTGGAACACCAATCCGTGTCATTGATTTGGGCATTACACATATCCCGAAAGATGTGTTTGAAACTTATTTGATCGAAATCAGCCCGCGTTATACAGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTCAGTAATGAGGTTGCTCAGTTTTTGGTTGGCTCGACCATCCCGGAGTATATTCTTCAGCTTCCCAACGGAGTTAGAAGCAGTCCCATCGGCAGACTCATGCGTAAGTCGGGATAGAGATAATAATCATAGATTCATTTTAGTCTATACAACTATTATTTATTCATGGTAATGAATGTTTGTGTTGACAGTGCCGATGATTCAGAATCTCGAAACAACATTAAAATCTGGTTCAGTTCCAAAAGTTCCACAGGTTAGACATAGTCAACCCGCAACGACATCAGCGCCAATATCAGTCTTGGATTCTAACGTTGAGGAATCAGCAGGCGGTGATGTCGGACCGTCTGGTGGCGGTAGTAGCAAGGCAATGCAGTCTAACACAACCAAGGATTTGACACATCTGTCTATAGAGCCTGCTGCAGGGGCAGGGCAGCAGCAGAAGTTGCCTGGGAAAACAATTGATGAAAGTCTTGTCAGGGATGCTCGTGCCATGATTCGAGACAGGATCAAGGTTGAATTTGCATCAAGCATGGCGACTGGGAAGTATCGTGCAAGTGAAGCTGCTGCACTTGCAGCCAAGAGAGTGATGAGCAAATATAATAGCCATACAAGTGCTGCAGCTTCACAGGACTAGAAGGTAACATGACATCCTTCTTCCTCCAATGTGGTTCTAGGATAGTTCGAGGATATTCATATAAGTAGTTAAAAACTTTGGTTCATGTACAGTTGGGAAATACTATTGAGATAATAACTGTTCATCTGCTGAGATTAAACATATTAGGCTCATCTAATAGCAACTTTGTTTCTAATTTTCAAAATAAAAAACAAAAGCGTTACATAAACACTTTCCATCTCAATTATTATGACTTGATACAAATTCATTTCCGAAATACGAACTATTTTGCATGTTGGTGTAATATTCATTCTTCATTCACTTAATTGGAGTTTCTTCTTGTAGTT AAACAATGAGCCGCCGAAGAAAATTCCATGAATCTTGAAGCTACTTCACCACACAACACGTATCTATGAATACACGTCGGTTTCTTCGCCGCTTCCTCCATCGGCCTGGTTTCTGATTGTCAATGGAAATAAACATTCGACCCCACATCTTCGTTTTATCCCTTTCTTCAATCGACTTCTTGGCCCTTGAAAATTTCCTTGGGCAAGATGGCTGAGGAGGAGTCTCACAGGGTTGTATTGAATTTATACGACCTTAGCTGTGGATTGGCTCGACAGTTCTCCACAGCATTGTTGGGGAAACCCATTGAAGGCATATGGCACACTGGGATTGTAGTGTATGACAATGAATACTACTATGGGGGTGGAATCCATCACAGTCTTTCTGGAAATACACCCTTTGGAACACCAATCCGTGTCATTGATTTGGGCATTACACATATCCCGAAAGATGTGTTTGAAACTTATTTGATCGAAATCAGCCCGCGTTATACAGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTCAGTAATGAGGTTGCTCAGTTTTTGGTTGGCTCGACCATCCCGGAGTATATTCTTCAGCTTCCCAACGGAGTTAGAAGCAGTCCCATCGGCAGACTCATGCTGCCGATGATTCAGAATCTCGAAACAACATTAAAATCTGGTTCAGTTCCAAAAGTTCCACAGGTTAGACATAGTCAACCCGCAACGACATCAGCGCCAATATCAGTCTTGGATTCTAACGTTGAGGAATCAGCAGGCGGTGATGTCGGACCGTCTGGTGGCGGTAGTAGCAAGGCAATGCAGTCTAACACAACCAAGGATTTGACACATCTGTCTATAGAGCCTGCTGCAGGGGCAGGGCAGCAGCAGAAGTTGCCTGGGAAAACAATTGATGAAAGTCTTGTCAGGGATGCTCGTGCCATGATTCGAGACAGGATCAAGGTTGAATTTGCATCAAGCATGGCGACTGGGAAGTATCGTGCAAGTGAAGCTGCTGCACTTGCAGCCAAGAGAGTGATGAGCAAATATAATAGCCATACAAGTGCTGCAGCTTCACAGGACTAGAAGGTAACATGACATCCTTCTTCCTCCAATGTGGTTCTAGGATAGTTCGAGGATATTCATATAAGTAGTTAAAAACTTTGGTTCATGTACAGTTGGGAAATACTATTGAGATAATAACTGTTCATCTGCTGAGATTAAACATATTAGGCTCATCTAATAGCAACTTTGTTTCTAATTTTCAAAATAAAAAACAAAAGCGTTACATAAACACTTTCCATCTCAATTATTATGACTTGATACAAATTCATTTCCGAAATACGAACTATTTTGCATGTTGGTGTAATATTCATTCTTCATTCACTTAATTGGAGTTTCTTCTTGTAGTT ATGGCTGAGGAGGAGTCTCACAGGGTTGTATTGAATTTATACGACCTTAGCTGTGGATTGGCTCGACAGTTCTCCACAGCATTGTTGGGGAAACCCATTGAAGGCATATGGCACACTGGGATTGTAGTGTATGACAATGAATACTACTATGGGGGTGGAATCCATCACAGTCTTTCTGGAAATACACCCTTTGGAACACCAATCCGTGTCATTGATTTGGGCATTACACATATCCCGAAAGATGTGTTTGAAACTTATTTGATCGAAATCAGCCCGCGTTATACAGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTCAGTAATGAGGTTGCTCAGTTTTTGGTTGGCTCGACCATCCCGGAGTATATTCTTCAGCTTCCCAACGGAGTTAGAAGCAGTCCCATCGGCAGACTCATGCTGCCGATGATTCAGAATCTCGAAACAACATTAAAATCTGGTTCAGTTCCAAAAGTTCCACAGGTTAGACATAGTCAACCCGCAACGACATCAGCGCCAATATCAGTCTTGGATTCTAACGTTGAGGAATCAGCAGGCGGTGATGTCGGACCGTCTGGTGGCGGTAGTAGCAAGGCAATGCAGTCTAACACAACCAAGGATTTGACACATCTGTCTATAGAGCCTGCTGCAGGGGCAGGGCAGCAGCAGAAGTTGCCTGGGAAAACAATTGATGAAAGTCTTGTCAGGGATGCTCGTGCCATGATTCGAGACAGGATCAAGGTTGAATTTGCATCAAGCATGGCGACTGGGAAGTATCGTGCAAGTGAAGCTGCTGCACTTGCAGCCAAGAGAGTGATGAGCAAATATAATAGCCATACAAGTGCTGCAGCTTCACAGGACTAG MAEEESHRVVLNLYDLSCGLARQFSTALLGKPIEGIWHTGIVVYDNEYYYGGGIHHSLSGNTPFGTPIRVIDLGITHIPKDVFETYLIEISPRYTAETYSLLGHNCNNFSNEVAQFLVGSTIPEYILQLPNGVRSSPIGRLMLPMIQNLETTLKSGSVPKVPQVRHSQPATTSAPISVLDSNVEESAGGDVGPSGGGSSKAMQSNTTKDLTHLSIEPAAGAGQQQKLPGKTIDESLVRDARAMIRDRIKVEFASSMATGKYRASEAAALAAKRVMSKYNSHTSAAASQD
BLAST of Lsi05G011150 vs. Swiss-Prot
Match: DESI1_XENLA (Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.0e-34 Identity = 71/157 (45.22%), Postives = 103/157 (65.61%), Query Frame = 1
BLAST of Lsi05G011150 vs. Swiss-Prot
Match: DESI1_HUMAN (Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.1e-32 Identity = 69/151 (45.70%), Postives = 96/151 (63.58%), Query Frame = 1
BLAST of Lsi05G011150 vs. Swiss-Prot
Match: DESI1_MOUSE (Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 8.8e-31 Identity = 67/151 (44.37%), Postives = 94/151 (62.25%), Query Frame = 1
BLAST of Lsi05G011150 vs. Swiss-Prot
Match: DESI1_RAT (Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 8.8e-31 Identity = 67/151 (44.37%), Postives = 94/151 (62.25%), Query Frame = 1
BLAST of Lsi05G011150 vs. Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 1
BLAST of Lsi05G011150 vs. TrEMBL
Match: A0A0A0L8S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G627710 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 1.2e-130 Identity = 248/293 (84.64%), Postives = 256/293 (87.37%), Query Frame = 1
BLAST of Lsi05G011150 vs. TrEMBL
Match: E5GB95_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 1.2e-127 Identity = 243/293 (82.94%), Postives = 256/293 (87.37%), Query Frame = 1
BLAST of Lsi05G011150 vs. TrEMBL
Match: W9S355_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015213 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.5e-82 Identity = 171/284 (60.21%), Postives = 210/284 (73.94%), Query Frame = 1
BLAST of Lsi05G011150 vs. TrEMBL
Match: I1KZA2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G354700 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.2e-80 Identity = 171/285 (60.00%), Postives = 206/285 (72.28%), Query Frame = 1
BLAST of Lsi05G011150 vs. TrEMBL
Match: A0A0B0NE76_GOSAR (PPPDE peptidase domain-containing 2 OS=Gossypium arboreum GN=F383_18490 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 5.5e-80 Identity = 168/287 (58.54%), Postives = 201/287 (70.03%), Query Frame = 1
BLAST of Lsi05G011150 vs. TAIR10
Match: AT3G07090.1 (AT3G07090.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 279.6 bits (714), Expect = 2.1e-75 Identity = 155/277 (55.96%), Postives = 193/277 (69.68%), Query Frame = 1
BLAST of Lsi05G011150 vs. TAIR10
Match: AT4G17486.1 (AT4G17486.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 65.5 bits (158), Expect = 6.3e-11 Identity = 43/127 (33.86%), Postives = 66/127 (51.97%), Query Frame = 1
BLAST of Lsi05G011150 vs. TAIR10
Match: AT5G47310.1 (AT5G47310.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08 Identity = 38/124 (30.65%), Postives = 61/124 (49.19%), Query Frame = 1
BLAST of Lsi05G011150 vs. TAIR10
Match: AT5G25170.1 (AT5G25170.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 52.8 bits (125), Expect = 4.2e-07 Identity = 36/128 (28.12%), Postives = 63/128 (49.22%), Query Frame = 1
BLAST of Lsi05G011150 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein) HSP 1 Score: 52.0 bits (123), Expect = 7.2e-07 Identity = 36/127 (28.35%), Postives = 59/127 (46.46%), Query Frame = 1
BLAST of Lsi05G011150 vs. NCBI nr
Match: gi|449453268|ref|XP_004144380.1| (PREDICTED: desumoylating isopeptidase 1-like [Cucumis sativus]) HSP 1 Score: 474.2 bits (1219), Expect = 1.7e-130 Identity = 248/293 (84.64%), Postives = 256/293 (87.37%), Query Frame = 1
BLAST of Lsi05G011150 vs. NCBI nr
Match: gi|659130203|ref|XP_008465049.1| (PREDICTED: desumoylating isopeptidase 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 464.2 bits (1193), Expect = 1.7e-127 Identity = 243/293 (82.94%), Postives = 256/293 (87.37%), Query Frame = 1
BLAST of Lsi05G011150 vs. NCBI nr
Match: gi|659130207|ref|XP_008465051.1| (PREDICTED: deSI-like protein sdu1 isoform X2 [Cucumis melo]) HSP 1 Score: 410.6 bits (1054), Expect = 2.3e-111 Identity = 216/265 (81.51%), Postives = 229/265 (86.42%), Query Frame = 1
BLAST of Lsi05G011150 vs. NCBI nr
Match: gi|703149921|ref|XP_010109724.1| (hypothetical protein L484_015213 [Morus notabilis]) HSP 1 Score: 314.3 bits (804), Expect = 2.2e-82 Identity = 171/284 (60.21%), Postives = 210/284 (73.94%), Query Frame = 1
BLAST of Lsi05G011150 vs. NCBI nr
Match: gi|1012214807|ref|XP_015934144.1| (PREDICTED: desumoylating isopeptidase 1 [Arachis duranensis]) HSP 1 Score: 314.3 bits (804), Expect = 2.2e-82 Identity = 170/282 (60.28%), Postives = 206/282 (73.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |