Cp4.1LG15g01420 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g01420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDesumoylating isopeptidase
LocationCp4.1LG15 : 1099456 .. 1102033 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATCATCAATTTCTTCTCCCTTTCTCCATTTCTCAGATCACTGCGATTCTTTCTTCTTCATAATCTGTTGACGTTTCTTTGTTTCTGCGTTCTGGGATTTGATTATTGCGTCTGCCTATCGTTTCATGGTTTATGATTGATTTGTATGATTTTCAGTACATGTTTATGGCTTTAATTGGTTAAGTATGAGATTTGAGATTTTCTTTCTTCCTGTTGTTGGTTGCTCTGCTTGTAGTGATGCACATGAAGTGTTTGATTTATTTACGCAATGAAATGAATTTGGGTTTCGTTCCTTTACTTGGATTCTTTTGAATACAACTTCTTGGCTCTTCAAAATTCCCTTGCCCTTGGGAAAGATGTCTGACGTTTTAGTTTGTAAGAACTAAGTTCACCGTAAGTAGAGATTGTCCTCTTTAAGCTTTCACTTTCGGGCTCCCCTCAAAGTTTTTAAAACGTGCCTAGGGAGAGGTTTCCACACCCTTGTAAGGAATGTTTCGTTCTCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCTTTGGGGACCTAGTGTCCTAACTGGCACATTGCTCGATGTCTGACTCTAATACCATTTGTAACAGCTCAAGTTCATCGCTAGTAAATATTATCCTCTTTAGATTTTCCCTTCTGGGCTTCCCCTAAGGTTTTAAGATGAGTCTCGTCTTAAAACTTCGGGGGGAAGCCCAGATATTGTCCTCTCTAGGTTTTTTCTTTCAGGCTTCCCTTCAAAGTTTTTAAAACACGTCTACTAGAGAGGGATTTCCACACTCTTATAAGAAAAGTTTCGTTCTCCTCTCCGACCAACGTGGGATCTCAGTAAGTAGATGTCTTTATTTCCCATGTGTGGGACTCTGGCTCAAGCTCAATACCCATTGTACTCCTAAATTGCTTTGACAATTACCAACATGTAAATAATGAGTAATGCTGTTTGTGTTTGCAACCTCACAATGCAAGGAGTCTCACAGAGTTGTATTGAATCTATACGACCTTAGCTGCGGATCGGCTCGATAGTTCTCGACAACATTGTTAGGGAAACCCATTAAAGGCATATAGTAAGTGCTGAACTTTGTTAAGATATTATGTTACTCGGTACCCAAGTAAAAGAGTTGTATATGGATAAACTGAGACTACATCCAATTGAAAGCGATTTTAAGGATATGAAATTATGATTAGGGAATGTTTAAAACTATTGATAGTTACTGTAACGACTTAAGCCTACCACTAGCAGATATTGTTCTATTTGGGATTTTCCTTTCAAGATTCTCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATCCTTCGTTCTCCTCAACCAATATGGGATCTCACAGTTACTACTCATACTAACAAGCTGTACCATTCTTTTTTAGGTAGTTCAATCATATGAACTCTGAAGTTAAGCATGTTTAACTTGGAGGTATGTAGGATGTAATAGCCCAAGTCCACTGCTAGCAAATATTGTCCTCTTTGGGTTTTCCCTTTCGGACTTCCCCTCAAGGTTTTTAAAACGTGTCTGTTAAGGAAAGGTTTCCACACCCTTATAAAGAATATTTCGTTCCCCTCTCCAACCAATGTGGGATCGACTTCTTGAAAATTTCCTAAAAATCATGTGAGTGAGATAATACATGCTAAAATGACACGTGTTGGTTTGTGACTATAGTCTTCACTCTTGGAAGAGTTCATGACAAGTAAGAACACAGTCATATCGCAGAAGATGTAGGAGAATGTCGGGACCATCAAGTGCCAAATTCAAATTCTAAATCTTGGTCTGAATCCTAGGAAGTTTACGTGTAGATGAGTTGATCTTATGAATCAAGTCTCCTTTACGAAAAGTTTGGGCACTAGATGGTCTTTTCTTACTTGAACTGGTGTTAGGACAATGAACACTACTTGTCTCTACATTAGTAATGTCGATTTTTGTTGATGAAGTATCGCATGATATCGCTTTCTTGCAAATTCTCACTCCAAAGTCGACTTAAGCATAACCTAACTGGTTAAAGTATATTTCAAATTCTCGCCCTTTACGTTGAACTCAAAGTTATACTGATTTTGTGAGTGGTTGATTCTCTTATACATTTCAGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTTAGTAATGAGGTTGATCAGCCTTTGGTTGGCTCGACCATCCCTGAGTATATTCTTCAGCTTCCCAGTGAAGTTAGCAGCAGTCCTGTCGGTAGACTCGTGCGTAAGTCGGGATAGAGATAACAATCATAGATTCTTTTTAGTCGATACATCTATTATATTATTCGTGGTAATGTTCGTTGTATTGACCGTGTCGATGATTCAGAATCTCAAAACAATGTTAAGATCTGGGGTAGTTCTGAAAGTTCCACAGGTTAGGCATAAACAACCAACAACCTCGGCCGCGAATATCGGTCTTGGATTCTAATGTTGAAGAATCATCAGGCTGTGATGTCGGACTGCGCTGTCGTGGTGGTAGCAAGGCAACTAAAGGGCAGTCTGTCGGGCAAGAACAATGGAGGACTTGA

mRNA sequence

ATGGTACATGTTTATGGCTTTAATTGGTTAAGTATGAGATTTGAGATTTTCTTTCTTCCTGTTGTTGGTTGCTCTGCTTGTAGTGATGCACATGAATATCGCATGATATCGCTTTCTTGCAAATTCTCACTCCAAAGTCGACTTAAGCATAACCTAACTGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTTAGTAATGAGGTTGATCAGCCTTTGGTTGGCTCGACCATCCCTGAGTATATTCTTCAGCTTCCCAGTGAAGTTAGCAGCAGTCCTGTCGAATCATCAGGCTGTGATGTCGGACTGCGCTGTCGTGGTGGTAGCAAGGCAACTAAAGGGCAGTCTGTCGGGCAAGAACAATGGAGGACTTGA

Coding sequence (CDS)

ATGGTACATGTTTATGGCTTTAATTGGTTAAGTATGAGATTTGAGATTTTCTTTCTTCCTGTTGTTGGTTGCTCTGCTTGTAGTGATGCACATGAATATCGCATGATATCGCTTTCTTGCAAATTCTCACTCCAAAGTCGACTTAAGCATAACCTAACTGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTTAGTAATGAGGTTGATCAGCCTTTGGTTGGCTCGACCATCCCTGAGTATATTCTTCAGCTTCCCAGTGAAGTTAGCAGCAGTCCTGTCGAATCATCAGGCTGTGATGTCGGACTGCGCTGTCGTGGTGGTAGCAAGGCAACTAAAGGGCAGTCTGTCGGGCAAGAACAATGGAGGACTTGA

Protein sequence

MVHVYGFNWLSMRFEIFFLPVVGCSACSDAHEYRMISLSCKFSLQSRLKHNLTAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPVESSGCDVGLRCRGGSKATKGQSVGQEQWRT
BLAST of Cp4.1LG15g01420 vs. Swiss-Prot
Match: DESI1_XENLA (Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07
Identity = 28/53 (52.83%), Postives = 34/53 (64.15%), Query Frame = 1

Query: 44  LQSRLKHNLTAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           L S  +   + E+Y L  HNCN FSNEV Q L G  IP YI +LPSEV S+P+
Sbjct: 89  LSSLGESGFSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITELPSEVLSTPL 141

BLAST of Cp4.1LG15g01420 vs. Swiss-Prot
Match: DESI1_MOUSE (Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 26/41 (63.41%), Postives = 28/41 (68.29%), Query Frame = 1

Query: 55  ETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSP 96
           E Y+L  HNCN FSNEV Q L G  IP YI  LPSEV S+P
Sbjct: 99  EAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTP 139

BLAST of Cp4.1LG15g01420 vs. Swiss-Prot
Match: DESI1_RAT (Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 26/41 (63.41%), Postives = 28/41 (68.29%), Query Frame = 1

Query: 55  ETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSP 96
           E Y+L  HNCN FSNEV Q L G  IP YI  LPSEV S+P
Sbjct: 99  EAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTP 139

BLAST of Cp4.1LG15g01420 vs. Swiss-Prot
Match: DESI1_HUMAN (Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 26/41 (63.41%), Postives = 28/41 (68.29%), Query Frame = 1

Query: 55  ETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSP 96
           E Y+L  HNCN FSNEV Q L G  IP YI  LPSEV S+P
Sbjct: 99  EAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTP 139

BLAST of Cp4.1LG15g01420 vs. TrEMBL
Match: A0A0A0L8S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G627710 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-12
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAE+YSLLGHNCNNFSNEV Q LVGSTIPEYILQLP+EV SSP+
Sbjct: 95  TAESYSLLGHNCNNFSNEVAQFLVGSTIPEYILQLPNEVRSSPM 138

BLAST of Cp4.1LG15g01420 vs. TrEMBL
Match: E5GB95_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAETYSLL HNCNNFSNEV Q LVGSTIPEYILQLP+EV +SP+
Sbjct: 95  TAETYSLLAHNCNNFSNEVAQFLVGSTIPEYILQLPNEVRNSPM 138

BLAST of Cp4.1LG15g01420 vs. TrEMBL
Match: A0A059A577_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02178 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAETYSLL HNCNNFSNEV Q LVGSTIP+YILQLP+EV SSP+
Sbjct: 88  TAETYSLLTHNCNNFSNEVAQFLVGSTIPDYILQLPNEVMSSPM 131

BLAST of Cp4.1LG15g01420 vs. TrEMBL
Match: A0A059A432_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_K021731 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAETYSLL HNCNNFSNEV Q LVGSTIP+YILQLP+EV SSP+
Sbjct: 58  TAETYSLLTHNCNNFSNEVAQFLVGSTIPDYILQLPNEVMSSPM 101

BLAST of Cp4.1LG15g01420 vs. TrEMBL
Match: W9S355_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015213 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.1e-11
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAETYSLL HNCNNFSNEV Q LVG+TIPEYILQLP+E+ SSP+
Sbjct: 94  TAETYSLLTHNCNNFSNEVAQFLVGATIPEYILQLPNEIMSSPM 137

BLAST of Cp4.1LG15g01420 vs. TAIR10
Match: AT3G07090.1 (AT3G07090.1 PPPDE putative thiol peptidase family protein)

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-12
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAE+Y+LL HNCNNFSNEV Q LVG  IP+YILQLP++V +SP+
Sbjct: 94  TAESYNLLTHNCNNFSNEVAQFLVGKGIPDYILQLPNDVLNSPM 137

BLAST of Cp4.1LG15g01420 vs. NCBI nr
Match: gi|449453268|ref|XP_004144380.1| (PREDICTED: desumoylating isopeptidase 1-like [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 5.2e-12
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAE+YSLLGHNCNNFSNEV Q LVGSTIPEYILQLP+EV SSP+
Sbjct: 95  TAESYSLLGHNCNNFSNEVAQFLVGSTIPEYILQLPNEVRSSPM 138

BLAST of Cp4.1LG15g01420 vs. NCBI nr
Match: gi|659130203|ref|XP_008465049.1| (PREDICTED: desumoylating isopeptidase 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAETYSLL HNCNNFSNEV Q LVGSTIPEYILQLP+EV +SP+
Sbjct: 95  TAETYSLLAHNCNNFSNEVAQFLVGSTIPEYILQLPNEVRNSPM 138

BLAST of Cp4.1LG15g01420 vs. NCBI nr
Match: gi|659130207|ref|XP_008465051.1| (PREDICTED: deSI-like protein sdu1 isoform X2 [Cucumis melo])

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAETYSLL HNCNNFSNEV Q LVGSTIPEYILQLP+EV +SP+
Sbjct: 67  TAETYSLLAHNCNNFSNEVAQFLVGSTIPEYILQLPNEVRNSPM 110

BLAST of Cp4.1LG15g01420 vs. NCBI nr
Match: gi|629082039|gb|KCW48484.1| (hypothetical protein EUGRSUZ_K021731, partial [Eucalyptus grandis])

HSP 1 Score: 76.6 bits (187), Expect = 3.4e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAETYSLL HNCNNFSNEV Q LVGSTIP+YILQLP+EV SSP+
Sbjct: 58  TAETYSLLTHNCNNFSNEVAQFLVGSTIPDYILQLPNEVMSSPM 101

BLAST of Cp4.1LG15g01420 vs. NCBI nr
Match: gi|702494830|ref|XP_010036832.1| (PREDICTED: desumoylating isopeptidase 1 [Eucalyptus grandis])

HSP 1 Score: 76.6 bits (187), Expect = 3.4e-11
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1

Query: 53  TAETYSLLGHNCNNFSNEVDQPLVGSTIPEYILQLPSEVSSSPV 97
           TAETYSLL HNCNNFSNEV Q LVGSTIP+YILQLP+EV SSP+
Sbjct: 94  TAETYSLLTHNCNNFSNEVAQFLVGSTIPDYILQLPNEVMSSPM 137

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
DESI1_XENLA1.3e-0752.83Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1[more]
DESI1_MOUSE6.6e-0763.41Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1[more]
DESI1_RAT6.6e-0763.41Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2 SV=1[more]
DESI1_HUMAN6.6e-0763.41Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L8S4_CUCSA3.6e-1286.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G627710 PE=4 SV=1[more]
E5GB95_CUCME1.4e-1184.09Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A059A577_EUCGR2.3e-1184.09Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02178 PE=4 SV=1[more]
A0A059A432_EUCGR2.3e-1184.09Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_K021731 PE=4... [more]
W9S355_9ROSA3.1e-1181.82Uncharacterized protein OS=Morus notabilis GN=L484_015213 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G07090.19.4e-1270.45 PPPDE putative thiol peptidase family protein[more]
Match NameE-valueIdentityDescription
gi|449453268|ref|XP_004144380.1|5.2e-1286.36PREDICTED: desumoylating isopeptidase 1-like [Cucumis sativus][more]
gi|659130203|ref|XP_008465049.1|2.0e-1184.09PREDICTED: desumoylating isopeptidase 1-like isoform X1 [Cucumis melo][more]
gi|659130207|ref|XP_008465051.1|2.0e-1184.09PREDICTED: deSI-like protein sdu1 isoform X2 [Cucumis melo][more]
gi|629082039|gb|KCW48484.1|3.4e-1184.09hypothetical protein EUGRSUZ_K021731, partial [Eucalyptus grandis][more]
gi|702494830|ref|XP_010036832.1|3.4e-1184.09PREDICTED: desumoylating isopeptidase 1 [Eucalyptus grandis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008580PPPDE_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0044424 intracellular part
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g01420.1Cp4.1LG15g01420.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008580PPPDE putative peptidase domainPFAMPF05903Peptidase_C97coord: 46..96
score: 3.6
NoneNo IPR availablePANTHERPTHR12378UNCHARACTERIZEDcoord: 44..96
score: 5.5
NoneNo IPR availablePANTHERPTHR12378:SF7DESUMOYLATING ISOPEPTIDASE 1coord: 44..96
score: 5.5

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g01420Cp4.1LG17g09780Cucurbita pepo (Zucchini)cpecpeB258