ClCG07G001940 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGCATCTTATTGAAGGAAAGCTATATAAATAGCTAAAGAAGAATGCAATTGGCAGTAACTATGAGAAAATAAACTGACTAACTAAAACATTTGCTTAATACTATATACTCTAATACTAACCATCTTTTGGTTGCACAATCCTCTATTTAAAAAAAGAAGCATTGAACCTCTCTTCAAACAAATAGGCAAGGTACCATCGACTCAAAAACAATCTATTGTGGATTATAATGGTACCATATTGTCCATGTTTGCTAATAATCTCTACTCAAAATACCCCATATAATGGAGATCTTGGGCTACCATAACACATACTGATTTTGTGAGTGCCTGATTCTCTAATGCATTTCAGGCACACCGGGATTGTAGTGTATGATAATGAGTACTACTATGGGGGTGGAATCCATCACAATCTTTCTGGAAATACACCCTTTGGAACACCAATCCATGTCATTGATTTGGGCATTACACACATCCCGAAAGATATGTTTGAAACTTATTTGATCGAAATCAGCCCGCGTTATACAGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTTAGTAATGAGGTTGCCCAGTTTTTGGTTGGCTCGACCATCCCAGAGTATATTCTTCAGCTTCCCAACGAAGTTAGCTGCAGTCCCATTGGCAGACTCATGTGTAAGTTGGGATAGAGATAACAATCATAGGTTCATTTTAGTCTATACATCTATTCTTTATTCATAGTAATGTATGTTTGTGTAAACAGTGCCGATGATTCAGAACCTCGAAACGACATTAAGATCTGGTGCAGTTCCAAAAGTTCCACAGGTTAGGCATAATCAACCCACAACGACACCAGCGCCAATACCAGTGACGGATTCTAATGTTGAAGAATCAGCAGGCTGTGAAGTTGGACCGTCTGTTGGTGGTGGTGGTAGCAAGGCAACTAAAGGGCAATCTGCCGAGCAAAACACAACTGAGGATTTGACACATCTGTCTATAGAGCCTGCTGCAGGGTCTGGGCAGCAGAAGTTGCCTCGGAAGACAATTGATGAAAGTCTGCTCAGGGATGCTCGAGCCATGATACGAGACAGGATCAAGGTTGAATTTGCATCGATCATGGCAACCGGGAAGTATCGTGCAAGTGATGCTGCTGTACTTGCAGCTAAGAGAGTGATGAGCAAATATAATAGCCATACAAGTGCTGCATCTTCACAGGGACTAGAAGGTACAAGGTAACATGACATCCTCCTTCCTCCAATGTGGTTCTAGGATAGTTCAAAGATATAAGTAGTTAAAAACTTTGCTTCATGTACAGTTAGGGAATACTGTTATGTAATAGTTGTTCATCTGCTGAGATTAAAACATATTAAGCTCATCTAAT GTGCATCTTATTGAAGGAAAGCTATATAAATAGCTAAAGAAGAATGCAATTGGCAGTAACTATGAGAAAATAAACTGACTAACTAAAACATTTGCTTAATACTATATACTCTAATACTAACCATCTTTTGGTTGCACAATCCTCTATTTAAAAAAAGAAGCATTGAACCTCTCTTCAAACAAATAGGCAAGGTACCATCGACTCAAAAACAATCTATTGTGGATTATAATGGTACCATATTGTCCATGTTTGCTAATAATCTCTACTCAAAATACCCCATATAATGGAGATCTTGGGCTACCATAACACATACTGATTTTGTGAGTGCCTGATTCTCTAATGCATTTCAGGCACACCGGGATTGTAGTGTATGATAATGAGTACTACTATGGGGGTGGAATCCATCACAATCTTTCTGGAAATACACCCTTTGGAACACCAATCCATGTCATTGATTTGGGCATTACACACATCCCGAAAGATATGTTTGAAACTTATTTGATCGAAATCAGCCCGCGTTATACAGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTTAGTAATGAGGTTGCCCAGTTTTTGGTTGGCTCGACCATCCCAGAGTATATTCTTCAGCTTCCCAACGAAGTTAGCTGCAGTCCCATTGGCAGACTCATGTTGCCGATGATTCAGAACCTCGAAACGACATTAAGATCTGGTGCAGTTCCAAAAGTTCCACAGGTTAGGCATAATCAACCCACAACGACACCAGCGCCAATACCAGTGACGGATTCTAATGTTGAAGAATCAGCAGGCTGTGAAGTTGGACCGTCTGTTGGTGGTGGTGGTAGCAAGGCAACTAAAGGGCAATCTGCCGAGCAAAACACAACTGAGGATTTGACACATCTGTCTATAGAGCCTGCTGCAGGGTCTGGGCAGCAGAAGTTGCCTCGGAAGACAATTGATGAAAGTCTGCTCAGGGATGCTCGAGCCATGATACGAGACAGGATCAAGGTTGAATTTGCATCGATCATGGCAACCGGGAAGTATCGTGCAAGTGATGCTGCTGTACTTGCAGCTAAGAGAGTGATGAGCAAATATAATAGCCATACAAGTGCTGCATCTTCACAGGGACTAGAAGGTACAAGGTAACATGACATCCTCCTTCCTCCAATGTGGTTCTAGGATAGTTCAAAGATATAAGTAGTTAAAAACTTTGCTTCATGTACAGTTAGGGAATACTGTTATGTAATAGTTGTTCATCTGCTGAGATTAAAACATATTAAGCTCATCTAAT ATGCATTTCAGGCACACCGGGATTGTAGTGTATGATAATGAGTACTACTATGGGGGTGGAATCCATCACAATCTTTCTGGAAATACACCCTTTGGAACACCAATCCATGTCATTGATTTGGGCATTACACACATCCCGAAAGATATGTTTGAAACTTATTTGATCGAAATCAGCCCGCGTTATACAGCTGAAACTTACAGCTTGTTGGGTCACAATTGCAACAACTTTAGTAATGAGGTTGCCCAGTTTTTGGTTGGCTCGACCATCCCAGAGTATATTCTTCAGCTTCCCAACGAAGTTAGCTGCAGTCCCATTGGCAGACTCATGTTGCCGATGATTCAGAACCTCGAAACGACATTAAGATCTGGTGCAGTTCCAAAAGTTCCACAGGTTAGGCATAATCAACCCACAACGACACCAGCGCCAATACCAGTGACGGATTCTAATGTTGAAGAATCAGCAGGCTGTGAAGTTGGACCGTCTGTTGGTGGTGGTGGTAGCAAGGCAACTAAAGGGCAATCTGCCGAGCAAAACACAACTGAGGATTTGACACATCTGTCTATAGAGCCTGCTGCAGGGTCTGGGCAGCAGAAGTTGCCTCGGAAGACAATTGATGAAAGTCTGCTCAGGGATGCTCGAGCCATGATACGAGACAGGATCAAGGTTGAATTTGCATCGATCATGGCAACCGGGAAGTATCGTGCAAGTGATGCTGCTGTACTTGCAGCTAAGAGAGTGATGAGCAAATATAATAGCCATACAAGTGCTGCATCTTCACAGGGACTAGAAGGTACAAGGTAA MHFRHTGIVVYDNEYYYGGGIHHNLSGNTPFGTPIHVIDLGITHIPKDMFETYLIEISPRYTAETYSLLGHNCNNFSNEVAQFLVGSTIPEYILQLPNEVSCSPIGRLMLPMIQNLETTLRSGAVPKVPQVRHNQPTTTPAPIPVTDSNVEESAGCEVGPSVGGGGSKATKGQSAEQNTTEDLTHLSIEPAAGSGQQKLPRKTIDESLLRDARAMIRDRIKVEFASIMATGKYRASDAAVLAAKRVMSKYNSHTSAASSQGLEGTR
BLAST of ClCG07G001940 vs. Swiss-Prot
Match: DESI1_XENLA (Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.8e-22 Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = 1
BLAST of ClCG07G001940 vs. Swiss-Prot
Match: DESI1_HUMAN (Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.9e-20 Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 1
BLAST of ClCG07G001940 vs. Swiss-Prot
Match: DESI1_MOUSE (Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 1
BLAST of ClCG07G001940 vs. Swiss-Prot
Match: DESI1_RAT (Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19 Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 1
BLAST of ClCG07G001940 vs. Swiss-Prot
Match: DESI2_MOUSE (Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 9.6e-08 Identity = 39/117 (33.33%), Postives = 53/117 (45.30%), Query Frame = 1
BLAST of ClCG07G001940 vs. TrEMBL
Match: A0A0A0L8S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G627710 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 5.9e-113 Identity = 205/256 (80.08%), Postives = 224/256 (87.50%), Query Frame = 1
BLAST of ClCG07G001940 vs. TrEMBL
Match: E5GB95_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 1.6e-110 Identity = 205/256 (80.08%), Postives = 222/256 (86.72%), Query Frame = 1
BLAST of ClCG07G001940 vs. TrEMBL
Match: W9S355_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015213 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 5.2e-69 Identity = 144/257 (56.03%), Postives = 182/257 (70.82%), Query Frame = 1
BLAST of ClCG07G001940 vs. TrEMBL
Match: F6I015_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06420 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 6.4e-67 Identity = 140/256 (54.69%), Postives = 181/256 (70.70%), Query Frame = 1
BLAST of ClCG07G001940 vs. TrEMBL
Match: A0A059A577_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02178 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-66 Identity = 142/256 (55.47%), Postives = 174/256 (67.97%), Query Frame = 1
BLAST of ClCG07G001940 vs. TAIR10
Match: AT3G07090.1 (AT3G07090.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 240.0 bits (611), Expect = 1.7e-63 Identity = 127/246 (51.63%), Postives = 164/246 (66.67%), Query Frame = 1
BLAST of ClCG07G001940 vs. TAIR10
Match: AT4G17486.1 (AT4G17486.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 56.2 bits (134), Expect = 3.5e-08 Identity = 32/98 (32.65%), Postives = 49/98 (50.00%), Query Frame = 1
BLAST of ClCG07G001940 vs. TAIR10
Match: AT5G47310.1 (AT5G47310.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 48.9 bits (115), Expect = 5.6e-06 Identity = 30/98 (30.61%), Postives = 47/98 (47.96%), Query Frame = 1
BLAST of ClCG07G001940 vs. NCBI nr
Match: gi|449453268|ref|XP_004144380.1| (PREDICTED: desumoylating isopeptidase 1-like [Cucumis sativus]) HSP 1 Score: 415.2 bits (1066), Expect = 8.4e-113 Identity = 205/256 (80.08%), Postives = 224/256 (87.50%), Query Frame = 1
BLAST of ClCG07G001940 vs. NCBI nr
Match: gi|659130203|ref|XP_008465049.1| (PREDICTED: desumoylating isopeptidase 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 407.1 bits (1045), Expect = 2.3e-110 Identity = 205/256 (80.08%), Postives = 222/256 (86.72%), Query Frame = 1
BLAST of ClCG07G001940 vs. NCBI nr
Match: gi|659130207|ref|XP_008465051.1| (PREDICTED: deSI-like protein sdu1 isoform X2 [Cucumis melo]) HSP 1 Score: 407.1 bits (1045), Expect = 2.3e-110 Identity = 205/256 (80.08%), Postives = 222/256 (86.72%), Query Frame = 1
BLAST of ClCG07G001940 vs. NCBI nr
Match: gi|1012214807|ref|XP_015934144.1| (PREDICTED: desumoylating isopeptidase 1 [Arachis duranensis]) HSP 1 Score: 270.0 bits (689), Expect = 4.4e-69 Identity = 143/253 (56.52%), Postives = 181/253 (71.54%), Query Frame = 1
BLAST of ClCG07G001940 vs. NCBI nr
Match: gi|703149921|ref|XP_010109724.1| (hypothetical protein L484_015213 [Morus notabilis]) HSP 1 Score: 269.2 bits (687), Expect = 7.5e-69 Identity = 144/257 (56.03%), Postives = 182/257 (70.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |