Lsi05G008800 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G008800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_15
Location	chr05 : 15192027 .. 15192611 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAAAACATACGCAATTCTGCAGAAGAAACTCCAAGAACTCGAATTACAACTCTCTCACAACAACATCACCACCATTATTCATCCTTCCCTTTCCCAAGAGTTCCACCAAAAGTTGCTTTTCGTCGCCAATCTCCTCTCCGCCGAGATCGCCTCGTGCCCGACCAAGCCTCGACACTTGAAGCACATTGCCCGCCGCCTCGCCCAACTCGAGGCTGCCTTCCGCAACTCGGACTTGCTCGACGACGACCATGTCGATGATTCGTCTACTTGTTCGTGCACCGAGTCATGCCTGAACGACGACGGCGAGGTAGCGAGTCACGTGCCGAGTAGTTGTCTGGAGGATGAGATGGAGGGTGGAGAGTATTTTTATGAGTGTGTGGAGGGTGAAAAAGAAGAGAAGGAAGAGATGATGATGATGATGAAGGAAGAGAGAAAAATTTTAGGAGTTGGAAAATTGTGTGCAGCAATGGCTAGTGGTTTTCTCATTGGTATGGTTTTAATGGGTGTTGCTATTTTTTTCATTGAGTTTTTTGGTTATTTTCAAGTCCAACAAAATGGAGGCTTTGTTACTCCAACTTAG

mRNA sequence

ATGACAAAAACATACGCAATTCTGCAGAAGAAACTCCAAGAACTCGAATTACAACTCTCTCACAACAACATCACCACCATTATTCATCCTTCCCTTTCCCAAGAGTTCCACCAAAAGTTGCTTTTCGTCGCCAATCTCCTCTCCGCCGAGATCGCCTCGTGCCCGACCAAGCCTCGACACTTGAAGCACATTGCCCGCCGCCTCGCCCAACTCGAGGCTGCCTTCCGCAACTCGGACTTGCTCGACGACGACCATGTCGATGATTCGTCTACTTGTTCGTGCACCGAGTCATGCCTGAACGACGACGGCGAGGTAGCGAGTCACGTGCCGAGTAGTTGTCTGGAGGATGAGATGGAGGGTGGAGAGTATTTTTATGAGTGTGTGGAGGGTGAAAAAGAAGAGAAGGAAGAGATGATGATGATGATGAAGGAAGAGAGAAAAATTTTAGGAGTTGGAAAATTGTGTGCAGCAATGGCTAGTGGTTTTCTCATTGGTATGGTTTTAATGGGTGTTGCTATTTTTTTCATTGAGTTTTTTGGTTATTTTCAAGTCCAACAAAATGGAGGCTTTGTTACTCCAACTTAG

Coding sequence (CDS)

ATGACAAAAACATACGCAATTCTGCAGAAGAAACTCCAAGAACTCGAATTACAACTCTCTCACAACAACATCACCACCATTATTCATCCTTCCCTTTCCCAAGAGTTCCACCAAAAGTTGCTTTTCGTCGCCAATCTCCTCTCCGCCGAGATCGCCTCGTGCCCGACCAAGCCTCGACACTTGAAGCACATTGCCCGCCGCCTCGCCCAACTCGAGGCTGCCTTCCGCAACTCGGACTTGCTCGACGACGACCATGTCGATGATTCGTCTACTTGTTCGTGCACCGAGTCATGCCTGAACGACGACGGCGAGGTAGCGAGTCACGTGCCGAGTAGTTGTCTGGAGGATGAGATGGAGGGTGGAGAGTATTTTTATGAGTGTGTGGAGGGTGAAAAAGAAGAGAAGGAAGAGATGATGATGATGATGAAGGAAGAGAGAAAAATTTTAGGAGTTGGAAAATTGTGTGCAGCAATGGCTAGTGGTTTTCTCATTGGTATGGTTTTAATGGGTGTTGCTATTTTTTTCATTGAGTTTTTTGGTTATTTTCAAGTCCAACAAAATGGAGGCTTTGTTACTCCAACTTAG

Protein sequence

MTKTYAILQKKLQELELQLSHNNITTIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPRHLKHIARRLAQLEAAFRNSDLLDDDHVDDSSTCSCTESCLNDDGEVASHVPSSCLEDEMEGGEYFYECVEGEKEEKEEMMMMMKEERKILGVGKLCAAMASGFLIGMVLMGVAIFFIEFFGYFQVQQNGGFVTPT

Homology

[Close]

BLAST of Lsi05G008800 vs. TrEMBL
Match: A0A0A0KUA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517140 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 6.9e-71
Identity = 153/196 (78.06%), Postives = 164/196 (83.67%), Query Frame = 1


Query: 1   MTKTYAILQKKLQELELQLSHNNITTIIHPSLSQEFHQKLLFVANLLSAEIASCPT--KP 60
           MTKTYAILQKKLQELELQLSHNN+TTIIHPSLSQEFHQKLLFVANLL+AEIASCP+  KP
Sbjct: 1   MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKP 60

Query: 61  RHLKHIARRLAQLEAAFRNSDLLDDDHVDDSSTCSCTESCLNDDGEVASHVPSSCLEDEM 120
           R LKH+ARRLAQLEA F + DL+D+  VDDS+TC CTESCLNDD EV S   SSCLEDEM
Sbjct: 61  RRLKHMARRLAQLEAVFWSPDLVDNGQVDDSTTCLCTESCLNDDSEVVS--GSSCLEDEM 120

Query: 121 EGGEYFYECVEGEKEEKEEMMMMMKEERKILGVGKLCAAMASGFLIGMVLMGVAIFFIEF 180
           EGGE FYECVEGEKEE        KEERKI+GV KL  AM SGF+IG+V MGVA FFIE 
Sbjct: 121 EGGECFYECVEGEKEE--------KEERKIVGVVKLNGAMVSGFVIGVVSMGVANFFIEL 180

Query: 181 FGYFQVQQNGGFVTPT 195
           FGYFQ QQNGGFV PT
Sbjct: 181 FGYFQHQQNGGFVIPT 186

[Close]

BLAST of Lsi05G008800 vs. TrEMBL
Match: B9R9S2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500360 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 80/183 (43.72%), Postives = 107/183 (58.47%), Query Frame = 1


Query: 1   MTKTYAILQKKLQELELQLSHN-NITTIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPR 60
           MTK Y++LQKKLQELE  L    ++  + H   SQ+  Q+L F+  LLSAEI S P KP 
Sbjct: 1   MTKRYSVLQKKLQELESFLKDVFSLNPLDHNLHSQDIEQRLEFLKTLLSAEITSSPEKPH 60

Query: 61  HLKHIARRLAQLEAAFRN-----SDLLDDDHVDDSSTCSCTESCLNDDGEVASHVPSSCL 120
           HL+HI++RL++LE+  R+     +  + + +V+  STCSCTESCLNDDGE A+    SC 
Sbjct: 61  HLQHISKRLSELESIVRDWHDYKTTTMHEHNVETVSTCSCTESCLNDDGE-ATFAGGSCG 120

Query: 121 EDEMEGGEYFYECVEGEKEEK-------EEMMMMMKEERKILGVGKLCAAMASGFLIGMV 171
            +E E        VEG  EE        EEM    KEE++ +GV  +   M    +IGM 
Sbjct: 121 FEETE------NAVEGSAEENNEEEVRVEEMSEAKKEEKRSVGVA-VGWRMFGSLMIGMA 175

[Close]

BLAST of Lsi05G008800 vs. TrEMBL
Match: A0A0D2RJU2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G216600 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 90/220 (40.91%), Postives = 110/220 (50.00%), Query Frame = 1


Query: 1   MTKTYAILQKKLQELELQLSHNN---ITTIIHPSLSQEFHQKLLFVANLLSAEIASCPTK 60
           MTK   ILQKKL+ELE QL   N   + T  H   SQ+  Q+ LF+ NLLSAEI+  P +
Sbjct: 33  MTKRCTILQKKLKELESQLKQVNSLPLDTPHHHRFSQDIQQRFLFLNNLLSAEISCRPKR 92

Query: 61  PRHLKHIARRLAQLEAAFRNSDLL---DDDHVDDSSTCSCTESCLNDDGEVASHVPS-SC 120
           P HL+ IA+RL +LEAAFR+ D       DHV+    CSCT SC ND+GE AS + S S 
Sbjct: 93  PFHLQPIAKRLHELEAAFRDWDSFRSPPSDHVEKGPPCSCTGSCFNDEGEAASELISLSD 152

Query: 121 LEDEMEGGEYF-----------------------YECVEGEKEEKE------EMMMM--M 180
           LE   E                            +E VE  K          EM +    
Sbjct: 153 LEQAAEASTELSLAAGLECDGFNDQIKVVEHVPVHEAVENHKSTATATTSVVEMSLAENR 212

Query: 181 KEERKILGVGKLCAAMASGFLIGMVLMGVAIFFIEFFGYF 183
           KEE K + +GK  A MASG L+GM LMG     + F G F
Sbjct: 213 KEETKGVWLGKCLATMASGVLMGMALMG--FLMVRFLGCF 250

[Close]

BLAST of Lsi05G008800 vs. TrEMBL
Match: A0A061G771_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014933 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.0e-19
Identity = 82/211 (38.86%), Postives = 107/211 (50.71%), Query Frame = 1


Query: 3   KTYAILQKKLQELELQLSHNNIT---TIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPR 62
           K++ ILQKKL+ELE +L+        T  H S SQ+  Q+ LF+ NLLSAEIAS P KP 
Sbjct: 4   KSFTILQKKLKELESELNQVFALPPETPHHKSFSQDIQQRFLFLKNLLSAEIASRPGKP- 63

Query: 63  HLKHIARRLAQLEAAFRNSDLLD---DDHVDDSSTCSCTESCLNDDGEVASHVPSSCLED 122
           +L+HIA+R  +LE+AF++ D       DH++  STCSCT+SCLNDDGE A       L D
Sbjct: 64  YLQHIAQRFLELESAFQDWDSFQASAPDHIEKGSTCSCTDSCLNDDGEAAEGSLELSLAD 123

Query: 123 EMEGGEYFYEC------VEGEKEEK-------------------------------EEMM 171
             E  E   E       +EG  EE+                               E   
Sbjct: 124 MEEVAEPSAELSLAGWDLEGSDEERMVTVPVLENLETARVSEAESERRNEEERVWVEAER 183

[Close]

BLAST of Lsi05G008800 vs. TrEMBL
Match: A0A151TLK5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_021525 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.4e-17
Identity = 72/217 (33.18%), Postives = 109/217 (50.23%), Query Frame = 1


Query: 1   MTKTYAILQKKLQELELQLSHNNIT---TIIHPSLSQEFHQKLLFVANLLSAEIASCPTK 60
           MTK+Y  ++ +L+EL+  L    +    T  H S+S +  Q+  F+ NLLSAE+AS P+K
Sbjct: 1   MTKSYKNVEAELEELQSMLDEALLLGPETESHDSISNDIKQRFAFIGNLLSAEVASHPSK 60

Query: 61  PRHLKHIARRLAQLEAAFRNSD---LLDDDHVDDSSTCSCTESCLNDDGEVA-------S 120
           P HL H++ RLA +E  F + D    L    +D  STCSCT+SCLNDDG+         +
Sbjct: 61  PHHLHHVSERLATMEREFHHWDSFRTLPFHDLDKDSTCSCTDSCLNDDGDETELTAFEEN 120

Query: 121 HVPSSCLEDEMEGGEYFYECVEGEKE----------EKEEMMMMMKEERKILGVGKLCAA 180
           +        + E  E F E   G+ E          +  +   + +EER+   VG  C A
Sbjct: 121 NGSDKFASLDYEDAEDFLEDFGGDNELVEFDGGILIKTRKDNGLEREERRESRVGNKCCA 180

Query: 181 MASGFLIGMVLMGVAIFFIEFFGYFQVQQNGGFVTPT 195
           +A+G L+G++ MG     +     F+  +   F  PT
Sbjct: 181 VAAGVLVGIIFMG--FIMVNISDCFRFVEQVSFAAPT 215

[Close]

BLAST of Lsi05G008800 vs. NCBI nr
Match: gi|700196139|gb|KGN51316.1| (hypothetical protein Csa_5G517140 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 9.9e-71
Identity = 153/196 (78.06%), Postives = 164/196 (83.67%), Query Frame = 1


Query: 1   MTKTYAILQKKLQELELQLSHNNITTIIHPSLSQEFHQKLLFVANLLSAEIASCPT--KP 60
           MTKTYAILQKKLQELELQLSHNN+TTIIHPSLSQEFHQKLLFVANLL+AEIASCP+  KP
Sbjct: 1   MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKP 60

Query: 61  RHLKHIARRLAQLEAAFRNSDLLDDDHVDDSSTCSCTESCLNDDGEVASHVPSSCLEDEM 120
           R LKH+ARRLAQLEA F + DL+D+  VDDS+TC CTESCLNDD EV S   SSCLEDEM
Sbjct: 61  RRLKHMARRLAQLEAVFWSPDLVDNGQVDDSTTCLCTESCLNDDSEVVS--GSSCLEDEM 120

Query: 121 EGGEYFYECVEGEKEEKEEMMMMMKEERKILGVGKLCAAMASGFLIGMVLMGVAIFFIEF 180
           EGGE FYECVEGEKEE        KEERKI+GV KL  AM SGF+IG+V MGVA FFIE 
Sbjct: 121 EGGECFYECVEGEKEE--------KEERKIVGVVKLNGAMVSGFVIGVVSMGVANFFIEL 180

Query: 181 FGYFQVQQNGGFVTPT 195
           FGYFQ QQNGGFV PT
Sbjct: 181 FGYFQHQQNGGFVIPT 186

[Close]

BLAST of Lsi05G008800 vs. NCBI nr
Match: gi|223550062|gb|EEF51549.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20
Identity = 80/183 (43.72%), Postives = 107/183 (58.47%), Query Frame = 1


Query: 1   MTKTYAILQKKLQELELQLSHN-NITTIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPR 60
           MTK Y++LQKKLQELE  L    ++  + H   SQ+  Q+L F+  LLSAEI S P KP 
Sbjct: 1   MTKRYSVLQKKLQELESFLKDVFSLNPLDHNLHSQDIEQRLEFLKTLLSAEITSSPEKPH 60

Query: 61  HLKHIARRLAQLEAAFRN-----SDLLDDDHVDDSSTCSCTESCLNDDGEVASHVPSSCL 120
           HL+HI++RL++LE+  R+     +  + + +V+  STCSCTESCLNDDGE A+    SC 
Sbjct: 61  HLQHISKRLSELESIVRDWHDYKTTTMHEHNVETVSTCSCTESCLNDDGE-ATFAGGSCG 120

Query: 121 EDEMEGGEYFYECVEGEKEEK-------EEMMMMMKEERKILGVGKLCAAMASGFLIGMV 171
            +E E        VEG  EE        EEM    KEE++ +GV  +   M    +IGM 
Sbjct: 121 FEETE------NAVEGSAEENNEEEVRVEEMSEAKKEEKRSVGVA-VGWRMFGSLMIGMA 175

[Close]

BLAST of Lsi05G008800 vs. NCBI nr
Match: gi|763784372|gb|KJB51443.1| (hypothetical protein B456_008G216600 [Gossypium raimondii])

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 90/220 (40.91%), Postives = 110/220 (50.00%), Query Frame = 1


Query: 1   MTKTYAILQKKLQELELQLSHNN---ITTIIHPSLSQEFHQKLLFVANLLSAEIASCPTK 60
           MTK   ILQKKL+ELE QL   N   + T  H   SQ+  Q+ LF+ NLLSAEI+  P +
Sbjct: 33  MTKRCTILQKKLKELESQLKQVNSLPLDTPHHHRFSQDIQQRFLFLNNLLSAEISCRPKR 92

Query: 61  PRHLKHIARRLAQLEAAFRNSDLL---DDDHVDDSSTCSCTESCLNDDGEVASHVPS-SC 120
           P HL+ IA+RL +LEAAFR+ D       DHV+    CSCT SC ND+GE AS + S S 
Sbjct: 93  PFHLQPIAKRLHELEAAFRDWDSFRSPPSDHVEKGPPCSCTGSCFNDEGEAASELISLSD 152

Query: 121 LEDEMEGGEYF-----------------------YECVEGEKEEKE------EMMMM--M 180
           LE   E                            +E VE  K          EM +    
Sbjct: 153 LEQAAEASTELSLAAGLECDGFNDQIKVVEHVPVHEAVENHKSTATATTSVVEMSLAENR 212

Query: 181 KEERKILGVGKLCAAMASGFLIGMVLMGVAIFFIEFFGYF 183
           KEE K + +GK  A MASG L+GM LMG     + F G F
Sbjct: 213 KEETKGVWLGKCLATMASGVLMGMALMG--FLMVRFLGCF 250

[Close]

BLAST of Lsi05G008800 vs. NCBI nr
Match: gi|590671677|ref|XP_007038398.1| (Uncharacterized protein TCM_014933 [Theobroma cacao])

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18
Identity = 82/211 (38.86%), Postives = 107/211 (50.71%), Query Frame = 1


Query: 3   KTYAILQKKLQELELQLSHNNIT---TIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPR 62
           K++ ILQKKL+ELE +L+        T  H S SQ+  Q+ LF+ NLLSAEIAS P KP 
Sbjct: 4   KSFTILQKKLKELESELNQVFALPPETPHHKSFSQDIQQRFLFLKNLLSAEIASRPGKP- 63

Query: 63  HLKHIARRLAQLEAAFRNSDLLD---DDHVDDSSTCSCTESCLNDDGEVASHVPSSCLED 122
           +L+HIA+R  +LE+AF++ D       DH++  STCSCT+SCLNDDGE A       L D
Sbjct: 64  YLQHIAQRFLELESAFQDWDSFQASAPDHIEKGSTCSCTDSCLNDDGEAAEGSLELSLAD 123

Query: 123 EMEGGEYFYEC------VEGEKEEK-------------------------------EEMM 171
             E  E   E       +EG  EE+                               E   
Sbjct: 124 MEEVAEPSAELSLAGWDLEGSDEERMVTVPVLENLETARVSEAESERRNEEERVWVEAER 183

[Close]

BLAST of Lsi05G008800 vs. NCBI nr
Match: gi|1012356725|gb|KYP67910.1| (hypothetical protein KK1_021525 [Cajanus cajan])

HSP 1 Score: 96.3 bits (238), Expect = 6.3e-17
Identity = 72/217 (33.18%), Postives = 109/217 (50.23%), Query Frame = 1


Query: 1   MTKTYAILQKKLQELELQLSHNNIT---TIIHPSLSQEFHQKLLFVANLLSAEIASCPTK 60
           MTK+Y  ++ +L+EL+  L    +    T  H S+S +  Q+  F+ NLLSAE+AS P+K
Sbjct: 1   MTKSYKNVEAELEELQSMLDEALLLGPETESHDSISNDIKQRFAFIGNLLSAEVASHPSK 60

Query: 61  PRHLKHIARRLAQLEAAFRNSD---LLDDDHVDDSSTCSCTESCLNDDGEVA-------S 120
           P HL H++ RLA +E  F + D    L    +D  STCSCT+SCLNDDG+         +
Sbjct: 61  PHHLHHVSERLATMEREFHHWDSFRTLPFHDLDKDSTCSCTDSCLNDDGDETELTAFEEN 120

Query: 121 HVPSSCLEDEMEGGEYFYECVEGEKE----------EKEEMMMMMKEERKILGVGKLCAA 180
           +        + E  E F E   G+ E          +  +   + +EER+   VG  C A
Sbjct: 121 NGSDKFASLDYEDAEDFLEDFGGDNELVEFDGGILIKTRKDNGLEREERRESRVGNKCCA 180

Query: 181 MASGFLIGMVLMGVAIFFIEFFGYFQVQQNGGFVTPT 195
           +A+G L+G++ MG     +     F+  +   F  PT
Sbjct: 181 VAAGVLVGIIFMG--FIMVNISDCFRFVEQVSFAAPT 215

The following BLAST results are available for this feature:

BLAST of Lsi05G008800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G008800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUA1_CUCSA	6.9e-71	78.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517140 PE=4 SV=1	[more]
B9R9S2_RICCO	1.1e-20	43.72	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500360 PE=4 SV=1	[more]
A0A0D2RJU2_GOSRA	1.2e-19	40.91	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G216600 PE=4 SV=1	[more]
A0A061G771_THECC	8.0e-19	38.86	Uncharacterized protein OS=Theobroma cacao GN=TCM_014933 PE=4 SV=1	[more]
A0A151TLK5_CAJCA	4.4e-17	33.18	Uncharacterized protein OS=Cajanus cajan GN=KK1_021525 PE=4 SV=1	[more]

BLAST of Lsi05G008800 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi05G008800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196139\|gb\|KGN51316.1\|	9.9e-71	78.06	hypothetical protein Csa_5G517140 [Cucumis sativus]	[more]
gi\|223550062\|gb\|EEF51549.1\|	1.6e-20	43.72	conserved hypothetical protein [Ricinus communis]	[more]
gi\|763784372\|gb\|KJB51443.1\|	1.8e-19	40.91	hypothetical protein B456_008G216600 [Gossypium raimondii]	[more]
gi\|590671677\|ref\|XP_007038398.1\|	1.2e-18	38.86	Uncharacterized protein TCM_014933 [Theobroma cacao]	[more]
gi\|1012356725\|gb\|KYP67910.1\|	6.3e-17	33.18	hypothetical protein KK1_021525 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G008800.1	Lsi05G008800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 125..145 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G008800	CmoCh02G010660	Cucurbita moschata (Rifu)	cmolsiB558
Lsi05G008800	Cla009466	Watermelon (97103) v1	lsiwmB343
Lsi05G008800	Cla97C09G175970	Watermelon (97103) v2	lsiwmbB354
Lsi05G008800	Bhi05G000481	Wax gourd	lsiwgoB461

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G008800	Cucurbita maxima (Rimu)	cmalsiB489
Lsi05G008800	Cucurbita maxima (Rimu)	cmalsiB581
Lsi05G008800	Cucurbita moschata (Rifu)	cmolsiB476
Lsi05G008800	Cucurbita pepo (Zucchini)	cpelsiB215
Lsi05G008800	Cucurbita pepo (Zucchini)	cpelsiB216
Lsi05G008800	Cucurbita pepo (Zucchini)	cpelsiB623
Lsi05G008800	Watermelon (Charleston Gray)	lsiwcgB316
Lsi05G008800	Silver-seed gourd	carlsiB651