CmoCh02G010660 (gene) Cucurbita moschata (Rifu)

NameCmoCh02G010660
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr02 : 6505819 .. 6506361 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAAAACGTATGCAATTCTACGGAAGAAACTCGAAGAACTTGAACGACAAGTACAACTCTCTCGCAACAACGTTCACCCTTCCCTCCTCCAAGATATCCACCAAAAGTGGCTTTTCATAGCCAATCTCCTCTCCGCCGAGGTCGCCTCATGCCCAAGCAAGCCTCGACATTTGAAGCACATTGCCCGCCGCCTTGCCCAACTCGAACCCGCCTTCCGCAATTGCAAAGCCGAGGACTTGGTCGATCATGTTGACGATGTGTCTACTTGTTCTTGCACTGAGTCGTGCTTGAACGACGATGGAGACGTAGCGAGTAGTTGTTTGGATGACGAGGAGGAGGGTGGGGAGTTTTATGAGTGTGTGGAGAATGAAAAAGAAGAGAAGGAAGAGAGAAAAATGGTGAGAGTTGGAACATTGTGGGGAGCAATGGCCAGTGGCTGTCTCATTGGTATGGCTTTAATGAGTATTGCTGTTTTTTCCATTGAGTGTTTTGGTCATCTTCAAGTTCAACAAAATGGAGGTTTTGTTACTCCAACTTAG

mRNA sequence

ATGACAAAAACGTATGCAATTCTACGGAAGAAACTCGAAGAACTTGAACGACAAGTACAACTCTCTCGCAACAACGTTCACCCTTCCCTCCTCCAAGATATCCACCAAAAGTGGCTTTTCATAGCCAATCTCCTCTCCGCCGAGGTCGCCTCATGCCCAAGCAAGCCTCGACATTTGAAGCACATTGCCCGCCGCCTTGCCCAACTCGAACCCGCCTTCCGCAATTGCAAAGCCGAGGACTTGGTCGATCATGTTGACGATGTGTCTACTTGTTCTTGCACTGAGTCGTGCTTGAACGACGATGGAGACGTAGCGAGTAGTTGTTTGGATGACGAGGAGGAGGGTGGGGAGTTTTATGAGTGTGTGGAGAATGAAAAAGAAGAGAAGGAAGAGAGAAAAATGGTGAGAGTTGGAACATTGTGGGGAGCAATGGCCAGTGGCTGTCTCATTGGTATGGCTTTAATGAGTATTGCTGTTTTTTCCATTGAGTGTTTTGGTCATCTTCAAGTTCAACAAAATGGAGGTTTTGTTACTCCAACTTAG

Coding sequence (CDS)

ATGACAAAAACGTATGCAATTCTACGGAAGAAACTCGAAGAACTTGAACGACAAGTACAACTCTCTCGCAACAACGTTCACCCTTCCCTCCTCCAAGATATCCACCAAAAGTGGCTTTTCATAGCCAATCTCCTCTCCGCCGAGGTCGCCTCATGCCCAAGCAAGCCTCGACATTTGAAGCACATTGCCCGCCGCCTTGCCCAACTCGAACCCGCCTTCCGCAATTGCAAAGCCGAGGACTTGGTCGATCATGTTGACGATGTGTCTACTTGTTCTTGCACTGAGTCGTGCTTGAACGACGATGGAGACGTAGCGAGTAGTTGTTTGGATGACGAGGAGGAGGGTGGGGAGTTTTATGAGTGTGTGGAGAATGAAAAAGAAGAGAAGGAAGAGAGAAAAATGGTGAGAGTTGGAACATTGTGGGGAGCAATGGCCAGTGGCTGTCTCATTGGTATGGCTTTAATGAGTATTGCTGTTTTTTCCATTGAGTGTTTTGGTCATCTTCAAGTTCAACAAAATGGAGGTTTTGTTACTCCAACTTAG
BLAST of CmoCh02G010660 vs. TrEMBL
Match: A0A0A0KUA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517140 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.7e-52
Identity = 126/191 (65.97%), Postives = 145/191 (75.92%), Query Frame = 1

Query: 1   MTKTYAILRKKLEELERQVQLSRNN----VHPSLLQDIHQKWLFIANLLSAEVASCPS-- 60
           MTKTYAIL+KKL+ELE  +QLS NN    +HPSL Q+ HQK LF+ANLL+AE+ASCPS  
Sbjct: 1   MTKTYAILQKKLQELE--LQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTL 60

Query: 61  KPRHLKHIARRLAQLEPAFRNCKAEDLVDH--VDDVSTCSCTESCLNDDGDVAS--SCLD 120
           KPR LKH+ARRLAQLE  F +    DLVD+  VDD +TC CTESCLNDD +V S  SCL+
Sbjct: 61  KPRRLKHMARRLAQLEAVFWS---PDLVDNGQVDDSTTCLCTESCLNDDSEVVSGSSCLE 120

Query: 121 DEEEGGE-FYECVENEKEEKEERKMVRVGTLWGAMASGCLIGMALMSIAVFSIECFGHLQ 180
           DE EGGE FYECVE EKEEKEERK+V V  L GAM SG +IG+  M +A F IE FG+ Q
Sbjct: 121 DEMEGGECFYECVEGEKEEKEERKIVGVVKLNGAMVSGFVIGVVSMGVANFFIELFGYFQ 180

BLAST of CmoCh02G010660 vs. TrEMBL
Match: A0A067D0H7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046238mg PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.7e-20
Identity = 81/188 (43.09%), Postives = 112/188 (59.57%), Query Frame = 1

Query: 1   MTK-TYAILRKKLEELERQVQL-------SRNNVHPSLLQDIHQKWLFIANLLSAEVASC 60
           MTK +Y+IL+KKL+ELE  +         + N  H    QDI Q++ FI  LLSAE+ S 
Sbjct: 1   MTKRSYSILQKKLKELESVLSELLSLPPETPNYNHQLYAQDIEQRFEFIRKLLSAEITSS 60

Query: 61  -PSKPRHLKHIARRLAQLEPAFR---NCKAEDLVDHVDD-VSTCSCTESCLN-DDGDVAS 120
            P K  HL+H+ARRLA+LE  F+   N KA  +V+H +  VSTCSC ESC+N DDGD   
Sbjct: 61  NPKKRYHLQHVARRLAELESIFKEWDNFKALTVVEHFEPPVSTCSCAESCVNDDDGDGDG 120

Query: 121 SCLDD---EEEGGEFYECVENEKEEKEERKMV--RVGTLWGAMASGCLIGMALMSIAVFS 169
              DD   +   G   E V N  E+KEE++++   +G  +G M +G +IGMALM + +F 
Sbjct: 121 EGDDDVSPKSYEGLMEEEVNNVGEKKEEKRVIIEVLGKYFGVMGAGVVIGMALMGLVIFK 180

BLAST of CmoCh02G010660 vs. TrEMBL
Match: V4SD62_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006531mg PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 76/185 (41.08%), Postives = 108/185 (58.38%), Query Frame = 1

Query: 1   MTK-TYAILRKKLEELERQVQL-------SRNNVHPSLLQDIHQKWLFIANLLSAEVASC 60
           MTK +Y+IL+KKL+ELE  +         + N  H    QDI Q++ F+  LLSAE+ S 
Sbjct: 1   MTKRSYSILQKKLKELESVLSELLSLPPETPNYNHQLYAQDIEQRFEFVRKLLSAEITSS 60

Query: 61  -PSKPRHLKHIARRLAQLEPAFR---NCKAEDLVDHVDD-VSTCSCTESCLNDDGDVASS 120
            P K  HL+HIARRLA+LE  F+   N KA  +V+H +  VSTCSC ESC+NDD      
Sbjct: 61  NPKKRYHLQHIARRLAELESIFKEWDNYKALTVVEHFEPPVSTCSCAESCVNDDDGDGDG 120

Query: 121 CLDDEEEGGEFYECVENEKEEKEERKMV--RVGTLWGAMASGCLIGMALMSIAVFSI-EC 170
            +  +   G   E V N  E+KEE++++   +G   G M +G +IGMALM + +     C
Sbjct: 121 DVSPKSYEGLMEEEVNNVGEKKEEKRVIIGVLGKYVGVMGAGVVIGMALMGLVIVKFSSC 180

BLAST of CmoCh02G010660 vs. TrEMBL
Match: A0A067FPT6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047261mg PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19
Identity = 76/185 (41.08%), Postives = 108/185 (58.38%), Query Frame = 1

Query: 1   MTK-TYAILRKKLEELERQVQL-------SRNNVHPSLLQDIHQKWLFIANLLSAEVASC 60
           MTK +Y+IL+KKL+ELE  +         + N  H    QDI Q++ F+  LLSAE+ S 
Sbjct: 1   MTKRSYSILQKKLKELESVLSELLSLPPETPNYNHQLYAQDIEQRFEFVRKLLSAEITSS 60

Query: 61  -PSKPRHLKHIARRLAQLEPAFR---NCKAEDLVDHVDD-VSTCSCTESCLNDDGDVASS 120
            P K  HL+HIARRLA+LE  F+   N KA  +V+H +  VSTCSC ESC+NDD      
Sbjct: 61  NPKKRYHLQHIARRLAELESIFKEWDNYKALTVVEHFEPPVSTCSCAESCVNDDDGDGDG 120

Query: 121 CLDDEEEGGEFYECVENEKEEKEERKMV--RVGTLWGAMASGCLIGMALMSIAVFSI-EC 170
            +  +   G   E V N  E+KEE++++   +G   G M +G +IGMALM + +     C
Sbjct: 121 DVSPKSYEGLMDEEVNNVGEKKEEKRVIIGVLGKYVGVMGAGVVIGMALMGLVIVKFSSC 180

BLAST of CmoCh02G010660 vs. TrEMBL
Match: B9R9S2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500360 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-19
Identity = 76/179 (42.46%), Postives = 103/179 (57.54%), Query Frame = 1

Query: 1   MTKTYAILRKKLEELERQVQ--LSRNNVHPSL-LQDIHQKWLFIANLLSAEVASCPSKPR 60
           MTK Y++L+KKL+ELE  ++   S N +  +L  QDI Q+  F+  LLSAE+ S P KP 
Sbjct: 1   MTKRYSVLQKKLQELESFLKDVFSLNPLDHNLHSQDIEQRLEFLKTLLSAEITSSPEKPH 60

Query: 61  HLKHIARRLAQLEPAFR---NCKAEDLVDH-VDDVSTCSCTESCLNDDGD---VASSCLD 120
           HL+HI++RL++LE   R   + K   + +H V+ VSTCSCTESCLNDDG+      SC  
Sbjct: 61  HLQHISKRLSELESIVRDWHDYKTTTMHEHNVETVSTCSCTESCLNDDGEATFAGGSCGF 120

Query: 121 DEEEGGEFYECVENEKEE----------KEERKMVRVGTLWGAMASGCLIGMALMSIAV 160
           +E E        EN +EE          KEE++ V V   W  M    +IGMALM   +
Sbjct: 121 EETENAVEGSAEENNEEEVRVEEMSEAKKEEKRSVGVAVGW-RMFGSLMIGMALMGFVM 178

BLAST of CmoCh02G010660 vs. NCBI nr
Match: gi|700196139|gb|KGN51316.1| (hypothetical protein Csa_5G517140 [Cucumis sativus])

HSP 1 Score: 211.8 bits (538), Expect = 9.6e-52
Identity = 126/191 (65.97%), Postives = 145/191 (75.92%), Query Frame = 1

Query: 1   MTKTYAILRKKLEELERQVQLSRNN----VHPSLLQDIHQKWLFIANLLSAEVASCPS-- 60
           MTKTYAIL+KKL+ELE  +QLS NN    +HPSL Q+ HQK LF+ANLL+AE+ASCPS  
Sbjct: 1   MTKTYAILQKKLQELE--LQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTL 60

Query: 61  KPRHLKHIARRLAQLEPAFRNCKAEDLVDH--VDDVSTCSCTESCLNDDGDVAS--SCLD 120
           KPR LKH+ARRLAQLE  F +    DLVD+  VDD +TC CTESCLNDD +V S  SCL+
Sbjct: 61  KPRRLKHMARRLAQLEAVFWS---PDLVDNGQVDDSTTCLCTESCLNDDSEVVSGSSCLE 120

Query: 121 DEEEGGE-FYECVENEKEEKEERKMVRVGTLWGAMASGCLIGMALMSIAVFSIECFGHLQ 180
           DE EGGE FYECVE EKEEKEERK+V V  L GAM SG +IG+  M +A F IE FG+ Q
Sbjct: 121 DEMEGGECFYECVEGEKEEKEERKIVGVVKLNGAMVSGFVIGVVSMGVANFFIELFGYFQ 180

BLAST of CmoCh02G010660 vs. NCBI nr
Match: gi|641808264|gb|KDO36479.1| (hypothetical protein CISIN_1g046238mg [Citrus sinensis])

HSP 1 Score: 105.5 bits (262), Expect = 9.7e-20
Identity = 81/188 (43.09%), Postives = 112/188 (59.57%), Query Frame = 1

Query: 1   MTK-TYAILRKKLEELERQVQL-------SRNNVHPSLLQDIHQKWLFIANLLSAEVASC 60
           MTK +Y+IL+KKL+ELE  +         + N  H    QDI Q++ FI  LLSAE+ S 
Sbjct: 1   MTKRSYSILQKKLKELESVLSELLSLPPETPNYNHQLYAQDIEQRFEFIRKLLSAEITSS 60

Query: 61  -PSKPRHLKHIARRLAQLEPAFR---NCKAEDLVDHVDD-VSTCSCTESCLN-DDGDVAS 120
            P K  HL+H+ARRLA+LE  F+   N KA  +V+H +  VSTCSC ESC+N DDGD   
Sbjct: 61  NPKKRYHLQHVARRLAELESIFKEWDNFKALTVVEHFEPPVSTCSCAESCVNDDDGDGDG 120

Query: 121 SCLDD---EEEGGEFYECVENEKEEKEERKMV--RVGTLWGAMASGCLIGMALMSIAVFS 169
              DD   +   G   E V N  E+KEE++++   +G  +G M +G +IGMALM + +F 
Sbjct: 121 EGDDDVSPKSYEGLMEEEVNNVGEKKEEKRVIIEVLGKYFGVMGAGVVIGMALMGLVIFK 180

BLAST of CmoCh02G010660 vs. NCBI nr
Match: gi|567857976|ref|XP_006421671.1| (hypothetical protein CICLE_v10006531mg [Citrus clementina])

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-19
Identity = 76/185 (41.08%), Postives = 108/185 (58.38%), Query Frame = 1

Query: 1   MTK-TYAILRKKLEELERQVQL-------SRNNVHPSLLQDIHQKWLFIANLLSAEVASC 60
           MTK +Y+IL+KKL+ELE  +         + N  H    QDI Q++ F+  LLSAE+ S 
Sbjct: 1   MTKRSYSILQKKLKELESVLSELLSLPPETPNYNHQLYAQDIEQRFEFVRKLLSAEITSS 60

Query: 61  -PSKPRHLKHIARRLAQLEPAFR---NCKAEDLVDHVDD-VSTCSCTESCLNDDGDVASS 120
            P K  HL+HIARRLA+LE  F+   N KA  +V+H +  VSTCSC ESC+NDD      
Sbjct: 61  NPKKRYHLQHIARRLAELESIFKEWDNYKALTVVEHFEPPVSTCSCAESCVNDDDGDGDG 120

Query: 121 CLDDEEEGGEFYECVENEKEEKEERKMV--RVGTLWGAMASGCLIGMALMSIAVFSI-EC 170
            +  +   G   E V N  E+KEE++++   +G   G M +G +IGMALM + +     C
Sbjct: 121 DVSPKSYEGLMEEEVNNVGEKKEEKRVIIGVLGKYVGVMGAGVVIGMALMGLVIVKFSSC 180

BLAST of CmoCh02G010660 vs. NCBI nr
Match: gi|641846594|gb|KDO65477.1| (hypothetical protein CISIN_1g047261mg [Citrus sinensis])

HSP 1 Score: 104.4 bits (259), Expect = 2.2e-19
Identity = 76/185 (41.08%), Postives = 108/185 (58.38%), Query Frame = 1

Query: 1   MTK-TYAILRKKLEELERQVQL-------SRNNVHPSLLQDIHQKWLFIANLLSAEVASC 60
           MTK +Y+IL+KKL+ELE  +         + N  H    QDI Q++ F+  LLSAE+ S 
Sbjct: 1   MTKRSYSILQKKLKELESVLSELLSLPPETPNYNHQLYAQDIEQRFEFVRKLLSAEITSS 60

Query: 61  -PSKPRHLKHIARRLAQLEPAFR---NCKAEDLVDHVDD-VSTCSCTESCLNDDGDVASS 120
            P K  HL+HIARRLA+LE  F+   N KA  +V+H +  VSTCSC ESC+NDD      
Sbjct: 61  NPKKRYHLQHIARRLAELESIFKEWDNYKALTVVEHFEPPVSTCSCAESCVNDDDGDGDG 120

Query: 121 CLDDEEEGGEFYECVENEKEEKEERKMV--RVGTLWGAMASGCLIGMALMSIAVFSI-EC 170
            +  +   G   E V N  E+KEE++++   +G   G M +G +IGMALM + +     C
Sbjct: 121 DVSPKSYEGLMDEEVNNVGEKKEEKRVIIGVLGKYVGVMGAGVVIGMALMGLVIVKFSSC 180

BLAST of CmoCh02G010660 vs. NCBI nr
Match: gi|223550062|gb|EEF51549.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19
Identity = 76/179 (42.46%), Postives = 103/179 (57.54%), Query Frame = 1

Query: 1   MTKTYAILRKKLEELERQVQ--LSRNNVHPSL-LQDIHQKWLFIANLLSAEVASCPSKPR 60
           MTK Y++L+KKL+ELE  ++   S N +  +L  QDI Q+  F+  LLSAE+ S P KP 
Sbjct: 1   MTKRYSVLQKKLQELESFLKDVFSLNPLDHNLHSQDIEQRLEFLKTLLSAEITSSPEKPH 60

Query: 61  HLKHIARRLAQLEPAFR---NCKAEDLVDH-VDDVSTCSCTESCLNDDGD---VASSCLD 120
           HL+HI++RL++LE   R   + K   + +H V+ VSTCSCTESCLNDDG+      SC  
Sbjct: 61  HLQHISKRLSELESIVRDWHDYKTTTMHEHNVETVSTCSCTESCLNDDGEATFAGGSCGF 120

Query: 121 DEEEGGEFYECVENEKEE----------KEERKMVRVGTLWGAMASGCLIGMALMSIAV 160
           +E E        EN +EE          KEE++ V V   W  M    +IGMALM   +
Sbjct: 121 EETENAVEGSAEENNEEEVRVEEMSEAKKEEKRSVGVAVGW-RMFGSLMIGMALMGFVM 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KUA1_CUCSA6.7e-5265.97Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517140 PE=4 SV=1[more]
A0A067D0H7_CITSI6.7e-2043.09Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046238mg PE=4 SV=1[more]
V4SD62_9ROSI1.1e-1941.08Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006531mg PE=4 SV=1[more]
A0A067FPT6_CITSI1.5e-1941.08Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047261mg PE=4 SV=1[more]
B9R9S2_RICCO2.0e-1942.46Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500360 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700196139|gb|KGN51316.1|9.6e-5265.97hypothetical protein Csa_5G517140 [Cucumis sativus][more]
gi|641808264|gb|KDO36479.1|9.7e-2043.09hypothetical protein CISIN_1g046238mg [Citrus sinensis][more]
gi|567857976|ref|XP_006421671.1|1.7e-1941.08hypothetical protein CICLE_v10006531mg [Citrus clementina][more]
gi|641846594|gb|KDO65477.1|2.2e-1941.08hypothetical protein CISIN_1g047261mg [Citrus sinensis][more]
gi|223550062|gb|EEF51549.1|2.8e-1942.46conserved hypothetical protein [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G010660.1CmoCh02G010660.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 5..25
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G010660Cla009466Watermelon (97103) v1cmowmB535
CmoCh02G010660Lsi05G008800Bottle gourd (USVL1VR-Ls)cmolsiB558
CmoCh02G010660Cla97C09G175970Watermelon (97103) v2cmowmbB638
CmoCh02G010660Bhi05G000481Wax gourdcmowgoB0729
The following gene(s) are paralogous to this gene:

None