Cla009466 (gene) Watermelon (97103) v1

Overview
NameCla009466
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr9 : 18435561 .. 18436118 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAAAACATGTGCAATTCTGCAGAAGAAACTCCGAGAACTCGAACTACAACTCTCTCACAACAACCTCACCACCATTATTCATCCTTCCCTCTCCCAAGAATTCCACCAAAAGTTGCTTTTCGTCGCCAATCTCCTCTCTGCCGAGATCGCCTCGTGCCCAACCAAGCCCCGACACTTGAAGCATATTGCCCGCCGCCTCTCCCAACTTGAGGCTGCATTCTGCGACTCAGACTTGCTCGATGACCATGTCGATGATTCATCTACTTGTTCGTGCACCGAGTCATGCCTGAACGACGACGGCGATGCAGCGAGTCAGGGGCCGAGTAGTTGTTTGGAGGATGAGATGGAGGGTGGGGAGTATTTTTATGAGTGTGTGAAGGATGAAAAGGAAGAGAAGGAAGAGAGAGAAATTTTAGGAGTTGGAAAATTGTGTGGAGCAATGGCTAGTGGCTTTCTCATTGGTATGGTTATGATGGGTTTTGCTGTTTTCTTCATTGTGTTTTTTGGTTATTTTCAAGTCCAACAAAATGGAGGCTTTGTTACTCCAACTTAG

mRNA sequence

ATGACAAAAACATGTGCAATTCTGCAGAAGAAACTCCGAGAACTCGAACTACAACTCTCTCACAACAACCTCACCACCATTATTCATCCTTCCCTCTCCCAAGAATTCCACCAAAAGTTGCTTTTCGTCGCCAATCTCCTCTCTGCCGAGATCGCCTCGTGCCCAACCAAGCCCCGACACTTGAAGCATATTGCCCGCCGCCTCTCCCAACTTGAGGCTGCATTCTGCGACTCAGACTTGCTCGATGACCATGTCGATGATTCATCTACTTGTTCGTGCACCGAGTCATGCCTGAACGACGACGGCGATGCAGCGAGTCAGGGGCCGAGTAGTTGTTTGGAGGATGAGATGGAGGGTGGGGAGTATTTTTATGAGTGTGTGAAGGATGAAAAGGAAGAGAAGGAAGAGAGAGAAATTTTAGGAGTTGGAAAATTGTGTGGAGCAATGGCTAGTGGCTTTCTCATTGGTATGGTTATGATGGGTTTTGCTGTTTTCTTCATTGTGTTTTTTGGTTATTTTCAAGTCCAACAAAATGGAGGCTTTGTTACTCCAACTTAG

Coding sequence (CDS)

ATGACAAAAACATGTGCAATTCTGCAGAAGAAACTCCGAGAACTCGAACTACAACTCTCTCACAACAACCTCACCACCATTATTCATCCTTCCCTCTCCCAAGAATTCCACCAAAAGTTGCTTTTCGTCGCCAATCTCCTCTCTGCCGAGATCGCCTCGTGCCCAACCAAGCCCCGACACTTGAAGCATATTGCCCGCCGCCTCTCCCAACTTGAGGCTGCATTCTGCGACTCAGACTTGCTCGATGACCATGTCGATGATTCATCTACTTGTTCGTGCACCGAGTCATGCCTGAACGACGACGGCGATGCAGCGAGTCAGGGGCCGAGTAGTTGTTTGGAGGATGAGATGGAGGGTGGGGAGTATTTTTATGAGTGTGTGAAGGATGAAAAGGAAGAGAAGGAAGAGAGAGAAATTTTAGGAGTTGGAAAATTGTGTGGAGCAATGGCTAGTGGCTTTCTCATTGGTATGGTTATGATGGGTTTTGCTGTTTTCTTCATTGTGTTTTTTGGTTATTTTCAAGTCCAACAAAATGGAGGCTTTGTTACTCCAACTTAG

Protein sequence

MTKTCAILQKKLRELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPRHLKHIARRLSQLEAAFCDSDLLDDHVDDSSTCSCTESCLNDDGDAASQGPSSCLEDEMEGGEYFYECVKDEKEEKEEREILGVGKLCGAMASGFLIGMVMMGFAVFFIVFFGYFQVQQNGGFVTPT
Homology
[Close]
BLAST of Cla009466 vs. TrEMBL
Match: A0A0A0KUA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517140 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.9e-71
Identity = 145/188 (77.13%), Postives = 159/188 (84.57%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLSAEIASCPT--KP 60
           MTKT AILQKKL+ELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLL+AEIASCP+  KP
Sbjct: 1   MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKP 60

Query: 61  RHLKHIARRLSQLEAAFCDSDLLDD-HVDDSSTCSCTESCLNDDGDAASQGPSSCLEDEM 120
           R LKH+ARRL+QLEA F   DL+D+  VDDS+TC CTESCLNDD +  S   SSCLEDEM
Sbjct: 61  RRLKHMARRLAQLEAVFWSPDLVDNGQVDDSTTCLCTESCLNDDSEVVSG--SSCLEDEM 120

Query: 121 EGGEYFYECVKDEKEEKEEREILGVGKLCGAMASGFLIGMVMMGFAVFFIVFFGYFQVQQ 180
           EGGE FYECV+ EKEEKEER+I+GV KL GAM SGF+IG+V MG A FFI  FGYFQ QQ
Sbjct: 121 EGGECFYECVEGEKEEKEERKIVGVVKLNGAMVSGFVIGVVSMGVANFFIELFGYFQHQQ 180

Query: 181 NGGFVTPT 186
           NGGFV PT
Sbjct: 181 NGGFVIPT 186

[Close]
BLAST of Cla009466 vs. TrEMBL
Match: A0A0D2RJU2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G216600 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23
Identity = 88/220 (40.00%), Postives = 108/220 (49.09%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHNN---LTTIIHPSLSQEFHQKLLFVANLLSAEIASCPTK 60
           MTK C ILQKKL+ELE QL   N   L T  H   SQ+  Q+ LF+ NLLSAEI+  P +
Sbjct: 33  MTKRCTILQKKLKELESQLKQVNSLPLDTPHHHRFSQDIQQRFLFLNNLLSAEISCRPKR 92

Query: 61  PRHLKHIARRLSQLEAAFCDSDLL----DDHVDDSSTCSCTESCLNDDGDAASQGPS-SC 120
           P HL+ IA+RL +LEAAF D D       DHV+    CSCT SC ND+G+AAS+  S S 
Sbjct: 93  PFHLQPIAKRLHELEAAFRDWDSFRSPPSDHVEKGPPCSCTGSCFNDEGEAASELISLSD 152

Query: 121 LEDEMEGGEYF-----------------------YECVKDEKE--------------EKE 174
           LE   E                            +E V++ K               E  
Sbjct: 153 LEQAAEASTELSLAAGLECDGFNDQIKVVEHVPVHEAVENHKSTATATTSVVEMSLAENR 212

[Close]
BLAST of Cla009466 vs. TrEMBL
Match: B9R9S2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500360 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.4e-22
Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHN-NLTTIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPR 60
           MTK  ++LQKKL+ELE  L    +L  + H   SQ+  Q+L F+  LLSAEI S P KP 
Sbjct: 1   MTKRYSVLQKKLQELESFLKDVFSLNPLDHNLHSQDIEQRLEFLKTLLSAEITSSPEKPH 60

Query: 61  HLKHIARRLSQLEAAFCD------SDLLDDHVDDSSTCSCTESCLNDDGDAASQGPSSCL 120
           HL+HI++RLS+LE+   D      + + + +V+  STCSCTESCLNDDG+A   G S   
Sbjct: 61  HLQHISKRLSELESIVRDWHDYKTTTMHEHNVETVSTCSCTESCLNDDGEATFAGGSCGF 120

Query: 121 EDEMEGGEYFYECVKDE--------KEEKEEREILGVGKLCGAMASGFLIGMVMMGFAVF 170
           E+     E   E   +E        + +KEE+  +GV  +   M    +IGM +MGF + 
Sbjct: 121 EETENAVEGSAEENNEEEVRVEEMSEAKKEEKRSVGVA-VGWRMFGSLMIGMALMGFVMT 180

[Close]
BLAST of Cla009466 vs. TrEMBL
Match: K4BIH3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21
Identity = 77/196 (39.29%), Postives = 109/196 (55.61%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHNNLT----TIIHPSLSQEFHQKLLFVANLLSAEIASCPT 60
           MTK   IL+KKL +LE  L H   T    +  H  LS    Q+L F+ +LL+AEI S P+
Sbjct: 1   MTKRYGILRKKLEKLESDL-HLLFTFPPDSATHEILSHAIEQQLEFLNHLLAAEITSSPS 60

Query: 61  KPRHLKHIARRLSQLEAAF-------CDSDLLDDHVDDSSTCSCTESCLNDDGDAASQGP 120
           KPRHL HI RRL++LE  F        D + ++DH D +S CSC++SC+NDDG+AA +  
Sbjct: 61  KPRHLYHIGRRLNELETVFDLHSQQQLDGNNMNDH-DAASVCSCSQSCINDDGEAAVERD 120

Query: 121 SSCLEDEMEGGEYFYECVKDEKEEKEEREILGVGKLCGAMASGFLIGMVMMGFAVFFIVF 180
           S  +  ++         VKD +E  E   I   G+  G +  G ++G V +GF +  + F
Sbjct: 121 SDPVNYDVPED----SPVKDIEEVGEGNVI--NGRYFGVLGCGVMMGAVCVGFVM--LRF 180

Query: 181 FGYFQVQQNGGFVTPT 186
           +  F V Q  GF+ PT
Sbjct: 181 YDSFLVIQPSGFLVPT 186

[Close]
BLAST of Cla009466 vs. TrEMBL
Match: A0A151TLK5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_021525 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 76/218 (34.86%), Postives = 105/218 (48.17%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHNNLT---TIIHPSLSQEFHQKLLFVANLLSAEIASCPTK 60
           MTK+   ++ +L EL+  L    L    T  H S+S +  Q+  F+ NLLSAE+AS P+K
Sbjct: 1   MTKSYKNVEAELEELQSMLDEALLLGPETESHDSISNDIKQRFAFIGNLLSAEVASHPSK 60

Query: 61  PRHLKHIARRLSQLEAAFCDSD----LLDDHVDDSSTCSCTESCLNDDGDAAS------- 120
           P HL H++ RL+ +E  F   D    L    +D  STCSCT+SCLNDDGD          
Sbjct: 61  PHHLHHVSERLATMEREFHHWDSFRTLPFHDLDKDSTCSCTDSCLNDDGDETELTAFEEN 120

Query: 121 -----------QGPSSCLED--------EMEGGEYFYECVKDEKEEKEEREILGVGKLCG 180
                      +     LED        E +GG    +  KD   E+EER    VG  C 
Sbjct: 121 NGSDKFASLDYEDAEDFLEDFGGDNELVEFDGG-ILIKTRKDNGLEREERRESRVGNKCC 180

Query: 181 AMASGFLIGMVMMGFAVFFIVFFGYFQVQQNGGFVTPT 186
           A+A+G L+G++ MGF    +     F+  +   F  PT
Sbjct: 181 AVAAGVLVGIIFMGF--IMVNISDCFRFVEQVSFAAPT 215

[Close]
BLAST of Cla009466 vs. NCBI nr
Match: gi|700196139|gb|KGN51316.1| (hypothetical protein Csa_5G517140 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 5.6e-71
Identity = 145/188 (77.13%), Postives = 159/188 (84.57%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLSAEIASCPT--KP 60
           MTKT AILQKKL+ELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLL+AEIASCP+  KP
Sbjct: 1   MTKTYAILQKKLQELELQLSHNNLTTIIHPSLSQEFHQKLLFVANLLTAEIASCPSTLKP 60

Query: 61  RHLKHIARRLSQLEAAFCDSDLLDD-HVDDSSTCSCTESCLNDDGDAASQGPSSCLEDEM 120
           R LKH+ARRL+QLEA F   DL+D+  VDDS+TC CTESCLNDD +  S   SSCLEDEM
Sbjct: 61  RRLKHMARRLAQLEAVFWSPDLVDNGQVDDSTTCLCTESCLNDDSEVVSG--SSCLEDEM 120

Query: 121 EGGEYFYECVKDEKEEKEEREILGVGKLCGAMASGFLIGMVMMGFAVFFIVFFGYFQVQQ 180
           EGGE FYECV+ EKEEKEER+I+GV KL GAM SGF+IG+V MG A FFI  FGYFQ QQ
Sbjct: 121 EGGECFYECVEGEKEEKEERKIVGVVKLNGAMVSGFVIGVVSMGVANFFIELFGYFQHQQ 180

Query: 181 NGGFVTPT 186
           NGGFV PT
Sbjct: 181 NGGFVIPT 186

[Close]
BLAST of Cla009466 vs. NCBI nr
Match: gi|763784372|gb|KJB51443.1| (hypothetical protein B456_008G216600 [Gossypium raimondii])

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-23
Identity = 88/220 (40.00%), Postives = 108/220 (49.09%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHNN---LTTIIHPSLSQEFHQKLLFVANLLSAEIASCPTK 60
           MTK C ILQKKL+ELE QL   N   L T  H   SQ+  Q+ LF+ NLLSAEI+  P +
Sbjct: 33  MTKRCTILQKKLKELESQLKQVNSLPLDTPHHHRFSQDIQQRFLFLNNLLSAEISCRPKR 92

Query: 61  PRHLKHIARRLSQLEAAFCDSDLL----DDHVDDSSTCSCTESCLNDDGDAASQGPS-SC 120
           P HL+ IA+RL +LEAAF D D       DHV+    CSCT SC ND+G+AAS+  S S 
Sbjct: 93  PFHLQPIAKRLHELEAAFRDWDSFRSPPSDHVEKGPPCSCTGSCFNDEGEAASELISLSD 152

Query: 121 LEDEMEGGEYF-----------------------YECVKDEKE--------------EKE 174
           LE   E                            +E V++ K               E  
Sbjct: 153 LEQAAEASTELSLAAGLECDGFNDQIKVVEHVPVHEAVENHKSTATATTSVVEMSLAENR 212

[Close]
BLAST of Cla009466 vs. NCBI nr
Match: gi|223550062|gb|EEF51549.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21
Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHN-NLTTIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPR 60
           MTK  ++LQKKL+ELE  L    +L  + H   SQ+  Q+L F+  LLSAEI S P KP 
Sbjct: 1   MTKRYSVLQKKLQELESFLKDVFSLNPLDHNLHSQDIEQRLEFLKTLLSAEITSSPEKPH 60

Query: 61  HLKHIARRLSQLEAAFCD------SDLLDDHVDDSSTCSCTESCLNDDGDAASQGPSSCL 120
           HL+HI++RLS+LE+   D      + + + +V+  STCSCTESCLNDDG+A   G S   
Sbjct: 61  HLQHISKRLSELESIVRDWHDYKTTTMHEHNVETVSTCSCTESCLNDDGEATFAGGSCGF 120

Query: 121 EDEMEGGEYFYECVKDE--------KEEKEEREILGVGKLCGAMASGFLIGMVMMGFAVF 170
           E+     E   E   +E        + +KEE+  +GV  +   M    +IGM +MGF + 
Sbjct: 121 EETENAVEGSAEENNEEEVRVEEMSEAKKEEKRSVGVA-VGWRMFGSLMIGMALMGFVMT 180

[Close]
BLAST of Cla009466 vs. NCBI nr
Match: gi|1012356725|gb|KYP67910.1| (hypothetical protein KK1_021525 [Cajanus cajan])

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 76/218 (34.86%), Postives = 105/218 (48.17%), Query Frame = 1 

Query: 1   MTKTCAILQKKLRELELQLSHNNLT---TIIHPSLSQEFHQKLLFVANLLSAEIASCPTK 60
           MTK+   ++ +L EL+  L    L    T  H S+S +  Q+  F+ NLLSAE+AS P+K
Sbjct: 1   MTKSYKNVEAELEELQSMLDEALLLGPETESHDSISNDIKQRFAFIGNLLSAEVASHPSK 60

Query: 61  PRHLKHIARRLSQLEAAFCDSD----LLDDHVDDSSTCSCTESCLNDDGDAAS------- 120
           P HL H++ RL+ +E  F   D    L    +D  STCSCT+SCLNDDGD          
Sbjct: 61  PHHLHHVSERLATMEREFHHWDSFRTLPFHDLDKDSTCSCTDSCLNDDGDETELTAFEEN 120

Query: 121 -----------QGPSSCLED--------EMEGGEYFYECVKDEKEEKEEREILGVGKLCG 180
                      +     LED        E +GG    +  KD   E+EER    VG  C 
Sbjct: 121 NGSDKFASLDYEDAEDFLEDFGGDNELVEFDGG-ILIKTRKDNGLEREERRESRVGNKCC 180

Query: 181 AMASGFLIGMVMMGFAVFFIVFFGYFQVQQNGGFVTPT 186
           A+A+G L+G++ MGF    +     F+  +   F  PT
Sbjct: 181 AVAAGVLVGIIFMGF--IMVNISDCFRFVEQVSFAAPT 215

[Close]
BLAST of Cla009466 vs. NCBI nr
Match: gi|590671677|ref|XP_007038398.1| (Uncharacterized protein TCM_014933 [Theobroma cacao])

HSP 1 Score: 104.0 bits (258), Expect = 2.9e-19
Identity = 63/126 (50.00%), Postives = 79/126 (62.70%), Query Frame = 1 

Query: 3   KTCAILQKKLRELELQLSHNNLT---TIIHPSLSQEFHQKLLFVANLLSAEIASCPTKPR 62
           K+  ILQKKL+ELE +L+        T  H S SQ+  Q+ LF+ NLLSAEIAS P KP 
Sbjct: 4   KSFTILQKKLKELESELNQVFALPPETPHHKSFSQDIQQRFLFLKNLLSAEIASRPGKP- 63

Query: 63  HLKHIARRLSQLEAAFCDSDLLD----DHVDDSSTCSCTESCLNDDGDAASQGPSSCLED 122
           +L+HIA+R  +LE+AF D D       DH++  STCSCT+SCLNDDG+AA       L D
Sbjct: 64  YLQHIAQRFLELESAFQDWDSFQASAPDHIEKGSTCSCTDSCLNDDGEAAEGSLELSLAD 123

The following BLAST results are available for this feature:
BLAST of Cla009466 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUA1_CUCSA3.9e-7177.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517140 PE=4 SV=1[more]
A0A0D2RJU2_GOSRA1.3e-2340.00Uncharacterized protein OS=Gossypium raimondii GN=B456_008G216600 PE=4 SV=1[more]
B9R9S2_RICCO7.4e-2240.22Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500360 PE=4 SV=1[more]
K4BIH3_SOLLC2.2e-2139.29Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A151TLK5_CAJCA1.1e-2034.86Uncharacterized protein OS=Cajanus cajan GN=KK1_021525 PE=4 SV=1[more]
BLAST of Cla009466 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196139|gb|KGN51316.1|5.6e-7177.13hypothetical protein Csa_5G517140 [Cucumis sativus][more]
gi|763784372|gb|KJB51443.1|1.9e-2340.00hypothetical protein B456_008G216600 [Gossypium raimondii][more]
gi|223550062|gb|EEF51549.1|1.1e-2140.22conserved hypothetical protein [Ricinus communis][more]
gi|1012356725|gb|KYP67910.1|1.5e-2034.86hypothetical protein KK1_021525 [Cajanus cajan][more]
gi|590671677|ref|XP_007038398.1|2.9e-1950.00Uncharacterized protein TCM_014933 [Theobroma cacao][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla009466Cla009466.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla009466Cla97C09G175970Watermelon (97103) v2wmwmbB047
Cla009466CmoCh02G010660Cucurbita moschata (Rifu)cmowmB535
Cla009466Lsi05G008800Bottle gourd (USVL1VR-Ls)lsiwmB343
Cla009466Bhi05G000481Wax gourdwgowmB255
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla009466Silver-seed gourdcarwmB0706
Cla009466Cucurbita maxima (Rimu)cmawmB474
Cla009466Cucurbita maxima (Rimu)cmawmB545
Cla009466Cucurbita moschata (Rifu)cmowmB474
Cla009466Watermelon (Charleston Gray)wcgwmB013
Cla009466Cucurbita pepo (Zucchini)cpewmB245
Cla009466Cucurbita pepo (Zucchini)cpewmB689