Lsi05G007940 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G007940
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionDof zinc finger protein
Locationchr05 : 11573605 .. 11578137 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTTAGCTTTTTGAAACAAAAAAAACCCATTATTGAAGTGGATAGCATGCATCACTCAGATTTGATTAAACATGCACCAAAGCCTAACAAACCTCCCTCATCATTACGTAATATATAATAGGAACCTTTGTCAATATGTTACCTCTAATAACCCTCAAATACAAAATTTGTTGAATTACGTACTTGTTAAAGACAACGAACTTTCATATATCTTCACAATTATATGATATTGTCTATTTTAGGTATATACCCTCATAGTTTTCCTTTTGGTTCGTATCATTGGAGATAGTTGTCCTTCATCACCCCCTTACCTATCTAACGTGGGACTTTGATTGCATTTCTAAAAATCTTTCCCTCAAATAAAGGACTACGAGTCTCCTCTCAAATAGTCATCTCTCTAAATTACACTTGAGCAACCTACCCGTCTGAAGGCTCAACCACAGATGGCCGATACCATCATGACTTTACCTTCTAAGCTTTCCATTCATTGTTCGAAACTCGAGGATTCTACTGACATGACTCTGTCAGAACCTTTTCTAATACCAATTTGTTATGAAATTGACAAGCAAAAAAAAGCATAAAACGTAAAACAATAGACAAAATTGACACAAGGATTACATAGTTCACTTATAATATCTTAGCTACGTCCATGGGCAGAGGGAGAGAGCAATTTTGTTATTAGAGAGAAATATCATATTTCATATTACAAAGTCACCTCTAGGATTAACGTTAGTTAGTTTATTATATTTTCGCACTCCTCTAAACCTTAGCACCTAAATCGTAAATAACATAAATATGAATACAACTTAAGTTTCAGGAGCATTGCCCTCAAACCCCCATCAGGACGCATCACCCTTGGAACTCCGACTAGCTGACCAGGTAGTGAAACCCCGAACTTGTCATTCAAAGCTCCAGATAACAGATTCAAGGCATATTTCAATAGTACTAACTCACATATCCAACTATATAAAACTAGATATACCATCATTGTTTTACTATATATGGATATCTGTGATTGTCCGGGTCAATTTGCACGTGCACCTCAACTAATTTCAGAGAACAATCCATCTAATCCTACTATGTAAGTGTGAATGAAAGCGTGTAGGAGATTAAATCATGGTTTTGGTTTAAAAAGGGACAATACATAAGAATGAAGAGAGAAAGGTAAGGTGTTTTTGCAGTGTGTCTGATGAGGTCTCACGCTGCTGCTCCCTCTAAGACAGCACACATATATAATCAAATCATCTTCAAACTTGTGGTTATGATATCTCTATATCAAATGCCAATCAATATATAGGATTATAGGCTTACATAATACGCCAAATTGCCATGCATGGGACTGTGTTCTTGAGTCTCTGCTACATCCAAATGTATTATTATATGTACGGTGTTTTCATACACTGTCTGTGTGTCTGTCTACACATAAGAGACACAGAGATGGCTAACTCTGCAAATGGGAGCTACTCAATTTTGGAGCCATTATACTTTAATCAACGCCTGAACCAATTATAAATTCTAGCTTAAATTGCAAATATGGTTCTTATGGTTTAGAGAAAGCATTAGAATTTAATCTTTATAATTTTAAATGTTAGAATTTAGTACTATGAGTTTGATAAAAACCTCATAAAATAGTCCTTATAATTTGATCAAATTCTCCTGAATAGTCGTTATTACTACTGTATGGGTTATTTATGAAGCTTTTATCAAATTATAGACTAAATTCTAATTATAAATCATAATGACTAAATTCTAACTTTCTCCAAATTATAAGAACCAAATTTATAATTTAACCTAAATTTTCATATACACAAAATTTCTTCCGTTTTAGTACAACATAATGTGGAGTTGAGATTTGAATATTTGTGACCTCAAGAAAGAAGTAAATTTCTTAACCAATGTGAGAGGGAGAAAATTTTATGTTTTAAACTTACATAAGTTTAGATCTTAAAATTGAGGTTTGTAACTAGTGTTTTAACTTTTAAAAGTACCTAAATAAGTCCTCAAACTTTCTATTTTATGTTTAATAAGTTCTTGAACTTCAAAAATGTCTAAAATATTTTTGAACTTTTAATTTTATGTCTAATAAGTTTCTGACATATTCAAACGTTTAAAAAATAATTTATATACTAGATATAAATTTGAATATTATTTCTAATTGAATTATAAACTTTCAATTTTGTGTTGGTAGATCCGTGAATTTTAAAATATATCCATTAGGTAAGTGATATTGGGATACAACATCAAAAGTTTCTACATCTATTAGCTAGACATGTAAAATTGAGAATTTAAAAATATATTAAAAATTTTCTGAAGTTAAAGAATAACATGTAATTTTTAGGAAAATTATTATAAATAAATAAAAATATCAAACTATTAACAAATATAGAAAAATTTTACTATCTATCAGCGATAAACCGTGTAGACTTCTATCGTTGTCTATCCTAATAGACAGTGAAATTTTTCTATATTTGAAAATAACCCTAATTTTTAACTTATATAAATAGTTTTAAATTTTTATTAAAAAAATTAGAGAGAAAACGGTTAAAGTTAAAGCATTTTGTGATGCTAGTCACAAAAAAAAATTATTACTTTATTTTTTAAAAATGTTGACACGTGTCGACATTTAATTAGGTGGAGCTAGGGCTGCATAAGAGATGGATGCAGTCCCATTGTATCAAAAAAAATTTCCTTTTTCTTTCTCTACCATAGGATGAATTGAGGTGAATAAAGTTGATAAGACATTTATTACCTTTCTCCTTCCTTTTTTTTTTTGGTCTATATTAGAGAAAATATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATATATATATATATATATATATATATATTATGTATGTATGTGTTTTATATTTGTAAATGTGAAACCTCTATTTGATGAAAATCACAAGCACCCATCAACATCCATCATGATGCCTTCTCACTGCATGAAGACATTGAATTTAGTATATATTATATTTGCCTCTAAAAAAGGGAAACTGAAATCATATATCAAACAACCCACAAGGGAAAAAAGAAAAAAAGAAAAAAAAAAAAAAAACTCTTCTTTTCAAGATCTCTCTCTCTCTCTCTCTCTCTCTCTATTCTATCATCTCCTTATATTATTGACAGTGTATATTGTTTTTGCAGCATTTGAATAATATAATGAAGAGCTCATTGGAAGAGGAAATAAGGCAAAAATCATCAACAACAGGTGGAAGAAGAAAAGAAAATAATAATAATAATAACAATGGAGATCATTGTGATGAAGAATTAGGAGGTTTGAAATGCCCTCGTTGTGATTCCACCAACACCAAATTTTGCTATTACAACAATTACAGTCTCACACAGCCTCGCCATTTTTGCAAGACTTGCCGGAGATATTGGACTAAAGGTGGAGCTTTGAGAAATGTTCCAATCGGTGGTGGCTGCCGGAAAACCAAAAAGCTCAAATCTTCTTCTTCTTCTTCTTCTTCCTCCGCCAAATTCTTCACCGGGATCTCGCCACCGCCGCCTCCGTTGTCTGTTGATTTTGGTGGCATTGGAGGAGATCAAGGTTCTTGTTTGCATCTTGCTTCTTCAATTGAATCTTTGAGCTCTCTAAATCAAGACCTTCATTGGAAATTACAACAACAACGTTTGGCTATGATTTTTGGAGATCATGATCATCATCAACAACAACAACAACAACCACAAAACAAGGATATTCAAAATCACAACTTTTTTCAACCCATTTTGTTTCACAATCTTCATCATCAAAAATCAGCTCCACCATCTACAACAACAACAATTGCTAGCGATCAATGGTTTTTTCCAAATCAAGTGACAGCCACAAACAACATAGCTTCAAGAACAGTTGATGATGGGAGTGGGTGGAATAATAATAATAATAATGATAATGATAATGATAATCATGGAGTAGTTCAAGCTTGGGAAGATTTGCATCATTTCACTGCCTTCCCCTAA

mRNA sequence

ATGGTGCAAAAATCATCAACAACAGGTGGAAGAAGAAAAGAAAATAATAATAATAATAACAATGGAGATCATTGTGATGAAGAATTAGGAGGTTTGAAATGCCCTCGTTGTGATTCCACCAACACCAAATTTTGCTATTACAACAATTACAGTCTCACACAGCCTCGCCATTTTTGCAAGACTTGCCGGAGATATTGGACTAAAGGTGGAGCTTTGAGAAATGTTCCAATCGGTGGTGGCTGCCGGAAAACCAAAAAGCTCAAATCTTCTTCTTCTTCTTCTTCTTCCTCCGCCAAATTCTTCACCGGGATCTCGCCACCGCCGCCTCCGTTGTCTGTTGATTTTGGTGGCATTGGAGGAGATCAAGGTTCTTGTTTGCATCTTGCTTCTTCAATTGAATCTTTGAGCTCTCTAAATCAAGACCTTCATTGGAAATTACAACAACAACGTTTGGCTATGATTTTTGGAGATCATGATCATCATCAACAACAACAACAACAACCACAAAACAAGGATATTCAAAATCACAACTTTTTTCAACCCATTTTGTTTCACAATCTTCATCATCAAAAATCAGCTCCACCATCTACAACAACAACAATTGCTAGCGATCAATGGTTTTTTCCAAATCAAGTGACAGCCACAAACAACATAGCTTCAAGAACAGTTGATGATGGGAGTGGGTGGAATAATAATAATAATAATGATAATGATAATGATAATCATGGAGTAGTTCAAGCTTGGGAAGATTTGCATCATTTCACTGCCTTCCCCTAA

Coding sequence (CDS)

ATGGTGCAAAAATCATCAACAACAGGTGGAAGAAGAAAAGAAAATAATAATAATAATAACAATGGAGATCATTGTGATGAAGAATTAGGAGGTTTGAAATGCCCTCGTTGTGATTCCACCAACACCAAATTTTGCTATTACAACAATTACAGTCTCACACAGCCTCGCCATTTTTGCAAGACTTGCCGGAGATATTGGACTAAAGGTGGAGCTTTGAGAAATGTTCCAATCGGTGGTGGCTGCCGGAAAACCAAAAAGCTCAAATCTTCTTCTTCTTCTTCTTCTTCCTCCGCCAAATTCTTCACCGGGATCTCGCCACCGCCGCCTCCGTTGTCTGTTGATTTTGGTGGCATTGGAGGAGATCAAGGTTCTTGTTTGCATCTTGCTTCTTCAATTGAATCTTTGAGCTCTCTAAATCAAGACCTTCATTGGAAATTACAACAACAACGTTTGGCTATGATTTTTGGAGATCATGATCATCATCAACAACAACAACAACAACCACAAAACAAGGATATTCAAAATCACAACTTTTTTCAACCCATTTTGTTTCACAATCTTCATCATCAAAAATCAGCTCCACCATCTACAACAACAACAATTGCTAGCGATCAATGGTTTTTTCCAAATCAAGTGACAGCCACAAACAACATAGCTTCAAGAACAGTTGATGATGGGAGTGGGTGGAATAATAATAATAATAATGATAATGATAATGATAATCATGGAGTAGTTCAAGCTTGGGAAGATTTGCATCATTTCACTGCCTTCCCCTAA

Protein sequence

MVQKSSTTGGRRKENNNNNNNGDHCDEELGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSSAKFFTGISPPPPPLSVDFGGIGGDQGSCLHLASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHNFFQPILFHNLHHQKSAPPSTTTTIASDQWFFPNQVTATNNIASRTVDDGSGWNNNNNNDNDNDNHGVVQAWEDLHHFTAFP
Homology
[Close]
BLAST of Lsi05G007940 vs. Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.6e-30
Identity = 71/117 (60.68%), Postives = 87/117 (74.36%), Query Frame = 1 

Query: 32  LKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKK-LKSS 91
           LKCPRC+S NTKFCYYNNYSL+QPRHFCK+CRRYWT+GGALRNVPIGGGCRKTKK +K +
Sbjct: 41  LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPN 100

Query: 92  SS-----SSSSSAKFFTGISPP-----PPPLSVDF--GGIGGDQGSCLHLASSIESL 136
           SS     SSSSS +FF+ I        PPP ++DF   G+  ++ + L L ++ E L
Sbjct: 101 SSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAGLSLNKMNDLQLLNNQEVL 157

[Close]
BLAST of Lsi05G007940 vs. Swiss-Prot
Match: DOF47_ARATH (Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.7e-30
Identity = 98/231 (42.42%), Postives = 118/231 (51.08%), Query Frame = 1 

Query: 32  LKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKS-- 91
           LKCPRCDS NTKFCYYNNYSL+QPRH+CK CRRYWT+GGALRNVPIGG  R   K  S  
Sbjct: 41  LKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTRNKNKPCSLQ 100

Query: 92  -------SSSSSSSSAKFFTGISPPPPPLSVDFGGIGG-----DQGSCLHLASSIESLSS 151
                   S+ +SS+++      P    + +  GG  G     D    L  +SSIESLSS
Sbjct: 101 VISSPPLFSNGTSSASRELVRNHPSTAMMMMSSGGFSGYMFPLDPNFNL-ASSSIESLSS 160

Query: 152 LNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHNFFQPILFHNLHHQKSAPPST 211
            NQDLH KLQQQRL            Q   P N+        + ++F N+   +  PPST
Sbjct: 161 FNQDLHQKLQQQRLVTSM------FLQDSLPVNE--------KTVMFQNV---ELIPPST 220

Query: 212 TTTIASDQWFFPNQVTATNNIASRTVDDGSGWNNNNNNDNDNDNHGVVQAW 249
            TT     W F    T            G G  + N+ DND D  G +  W
Sbjct: 221 VTT----DWVFDRFAT------------GGGATSGNHEDND-DGEGNLGNW 236

[Close]
BLAST of Lsi05G007940 vs. Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.3e-28
Identity = 55/70 (78.57%), Postives = 63/70 (90.00%), Query Frame = 1 

Query: 30  GGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKS 89
           G LKCPRCDS NTKFCY+NNY+LTQPRHFCK CRRYWT+GGALRNVP+GGGCR+ KK KS
Sbjct: 92  GALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKS 151

Query: 90  SSSSSSSSAK 100
            +S SSSS++
Sbjct: 152 GNSKSSSSSQ 161

[Close]
BLAST of Lsi05G007940 vs. Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27
Identity = 51/66 (77.27%), Postives = 64/66 (96.97%), Query Frame = 1 

Query: 32  LKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 91
           LKCPRC+STNTKFCY+NNYSLTQPRHFCKTCRRYWT+GGALRNVP+GGGCR+ ++ KS+S
Sbjct: 89  LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSNS 148

Query: 92  SSSSSS 98
           +++++S
Sbjct: 149 NNNNNS 154

[Close]
BLAST of Lsi05G007940 vs. Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 2.4e-27
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 1 

Query: 33  KCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSS 92
           KCPRC+ST+TKFCYYNNYSL+QPR+FCKTCRRYWTKGG LRN+P+GGGCRK KK  SS+S
Sbjct: 74  KCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPSSSNS 133

Query: 93  SSSSSA 99
           SSS+S+
Sbjct: 134 SSSTSS 139

[Close]
BLAST of Lsi05G007940 vs. TrEMBL
Match: A0A0A0L2T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G115040 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.1e-95
Identity = 198/265 (74.72%), Postives = 216/265 (81.51%), Query Frame = 1 

Query: 3   QKSSTTGGRRKENNNNNNNGDHCDEE--LGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCK 62
           QKSS+  GRRKEN N    GD+C+++  LGG+KCPRCDSTNTKFCYYNNYSLTQPRHFCK
Sbjct: 11  QKSSS--GRRKENKN----GDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPRHFCK 70

Query: 63  TCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSSAKFFTGISP--PPPPLSVDFGGI 122
           TCRRYWTKGGALRNVPIGGGCRKTKKLK SSSSSSSSAKFFTGI P  P PP SVDFGG 
Sbjct: 71  TCRRYWTKGGALRNVPIGGGCRKTKKLK-SSSSSSSSAKFFTGIIPPLPVPPPSVDFGGT 130

Query: 123 GGDQGSCLHLASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHNF 182
           GG  GSCL LASSIESLSSLNQDLHWKLQQQRLAMI GDH     +Q  PQNK +QNHNF
Sbjct: 131 GGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDH-----EQPPPQNK-VQNHNF 190

Query: 183 FQPILFHNLHHQKSAPPSTTTTI----ASDQWFFPNQVTATNNIASRTVDDG-SGWNNNN 242
           FQPILFHNLHHQ S  P+TTTTI     +DQW FP Q++A NN ASR+++DG  GWNNNN
Sbjct: 191 FQPILFHNLHHQDS--PATTTTITTATTTDQWLFPTQLSAPNNGASRSINDGHGGWNNNN 250

Query: 243 NNDNDNDNHGVVQAWEDLHHFTAFP 259
           +ND+ N     V+ WEDLHHFTAFP
Sbjct: 251 SNDDHNIG---VEGWEDLHHFTAFP 257

[Close]
BLAST of Lsi05G007940 vs. TrEMBL
Match: A0A061DI28_THECC (Dof-type zinc finger DNA-binding family protein OS=Theobroma cacao GN=TCM_000956 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-41
Identity = 132/324 (40.74%), Postives = 151/324 (46.60%), Query Frame = 1 

Query: 13  KENNNNNNNGDHCDE--ELGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGG 72
           KE N + +N        +   LKCPRCDS NTKFCYYNNYSLTQPRHFCKTCRRYWTKGG
Sbjct: 14  KEENQSGSNRKAASTRPQEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGG 73

Query: 73  ALRNVPIGGGCRKTKKLKSS-----------SSSSSSSAKFFTGISPPP---------PP 132
           ALRNVPIGGGCRK KK+KSS           SSS     KFF G+SP           P 
Sbjct: 74  ALRNVPIGGGCRKNKKIKSSSRLSGDSKDSTSSSEMGGLKFFHGLSPAMDFQLGGLSFPR 133

Query: 133 LSVDFGGI-------------------GGDQGSCL------------------------- 192
           L+    GI                    G   S +                         
Sbjct: 134 LNPSPAGIYNQFASFADSTSPSFSLDPSGSSNSLMGLSNYPLSSVTSGLSGAIQEMGSLN 193

Query: 193 ---HLASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHNFFQPIL 252
               L SSIESLSS+NQDLHWKLQQQRLAM+FG  +  +         D Q     QPIL
Sbjct: 194 VNSSLTSSIESLSSINQDLHWKLQQQRLAMLFGGENQKENSTVSSVPLDNQAQK-PQPIL 253

Query: 253 FHNLHHQK------SAPPSTTTTIASDQWFFPNQ---VTATNNIASRTVDDGSGWNNNNN 259
           F NL   K        P   T+   + +WFF +    VT T   +S   D+ S WN    
Sbjct: 254 FQNLEVSKPEISAVGNPRKGTSNETATEWFFGSSYAPVTPTPTTSSNGNDNTSNWNG--- 313

[Close]
BLAST of Lsi05G007940 vs. TrEMBL
Match: A0A0D2RCH5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G094000 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-41
Identity = 134/347 (38.62%), Postives = 158/347 (45.53%), Query Frame = 1 

Query: 4   KSSTTGGRRKENNNNNNNGDHCDEELGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCR 63
           K +     +   N    +     ++   LKCPRCDS NTKFCYYNNYSLTQPRHFCKTCR
Sbjct: 9   KPAAKDENQSSGNRKTGSTRAAQDQQAALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCR 68

Query: 64  RYWTKGGALRNVPIGGGCRKTKKLKSSS-------------------------------- 123
           RYWTKGGALRNVPIGGGCRK KKLK SS                                
Sbjct: 69  RYWTKGGALRNVPIGGGCRKNKKLKPSSRLSSDSKDSISSSEMGGGLKFFHGLSPAMDFQ 128

Query: 124 ---------SSSSSS-----AKFFTGISPPPPPLSVDFGGIG----------------GD 183
                    +SS  +     A F    +PPP   ++D  G                  G 
Sbjct: 129 LGGLSLPRLNSSPPAIYNQFASFGDTDTPPPTSFTLDPSGSSTSLMGFNNYPLSSLTPGL 188

Query: 184 QGSCLH---------LASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQ-------- 243
            G+ L          LASSIESLSS+NQDLHWKLQQQRLAM+FG    +Q++        
Sbjct: 189 SGAILEMGSLNVSSGLASSIESLSSINQDLHWKLQQQRLAMLFGGGGENQKENTITTTAC 248

Query: 244 ----QQQPQNKDIQNHNFFQPILFHNLHHQK------SAPPSTTTTIASDQWFFPNQ--- 259
               + QPQ          QPILFHNL   K        P   TT   + +WFF N    
Sbjct: 249 SVPVENQPQR--------LQPILFHNLEISKPEISSVENPRKATTNENATEWFFGNSYAP 308

[Close]
BLAST of Lsi05G007940 vs. TrEMBL
Match: A0A0D2NVV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G036800 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-40
Identity = 129/313 (41.21%), Postives = 153/313 (48.88%), Query Frame = 1 

Query: 3   QKSSTTGGRRKENNNNNNNGDHCDEELGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTC 62
           ++ +  GG RK ++    +          LKCPRCDS NTKFCYYNNYSLTQPRHFCKTC
Sbjct: 17  KEETQKGGSRKTSSTRTQDQ--------ALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTC 76

Query: 63  RRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSS-----------SSAKFFTGISP----- 122
           RRYWTKGGALRNVPIGGGCRK KK+KSSS  SS              KFF  ISP     
Sbjct: 77  RRYWTKGGALRNVPIGGGCRKNKKMKSSSRLSSGDPKGSTSEMGGGLKFFHDISPAMDFQ 136

Query: 123 --------PPPPLSVDFGGIGGDQ---------------------------GSCLHLASS 182
                   P   +   F   G                              G+   + SS
Sbjct: 137 LGGLSFQSPATGIYNQFASFGDGNNNSSVGSPLMGFSNYPQPFPSVTTNLTGAIPDMGSS 196

Query: 183 IESLSSLNQDLHWKLQQQRLA-MIFGDHDHHQQQQQQPQNKDIQNHNFFQPILFHNLHHQ 242
           + SLSS+NQDLHWKLQQQRLA M+F   + +Q QQQ+P            PILF NL   
Sbjct: 197 LNSLSSINQDLHWKLQQQRLATMLFDGGEQNQAQQQKP-----------LPILFQNLEVS 256

Query: 243 KSAPPST-----TTTIASDQWFFPNQVTATNNIASRTVDDGSGWNNNNNNDNDNDNHGVV 259
           K    ST      +   + +WFF N   AT   +S         N N+NN+  N N   V
Sbjct: 257 KPENVSTMENPRKSNETAKEWFFGNSY-ATPTTSS---------NGNDNNNTSNWNGVQV 300

[Close]
BLAST of Lsi05G007940 vs. TrEMBL
Match: A0A0B2PBC7_GLYSO (Dof zinc finger protein DOF5.7 OS=Glycine soja GN=glysoja_024268 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.3e-39
Identity = 132/336 (39.29%), Postives = 160/336 (47.62%), Query Frame = 1 

Query: 3   QKSSTTGGRRKENNNNNNNGDHCDEELGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTC 62
           Q++ ++GG RK ++              GLKCPRCDS NTKFCYYNNYSLTQPRHFCKTC
Sbjct: 17  QETQSSGGGRKSSSTRPQEQ--------GLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTC 76

Query: 63  RRYWTKGGALRNVPIGGGCRKTKKLKS-----------SSSSSSSSAKFFTGISP----- 122
           RRYWTKGGALRNVPIGGGCRK KK+KS           SSSS     KF   +SP     
Sbjct: 77  RRYWTKGGALRNVPIGGGCRKNKKVKSSRLSCDSKDSGSSSSELGGLKFLHSLSPSMDFH 136

Query: 123 -------------PPPPLSVDFGGIG--GDQGSCLH------------------------ 182
                        PP P +  F   G      SC +                        
Sbjct: 137 LGGLPFPRLHHHHPPTPYN-HFSSFGDTSSASSCFNLDPSPGTTPSSSFAALNNYPFSYN 196

Query: 183 --------------LASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQQ-------- 242
                         LASSIESLSS+NQDLHWKLQQQRLAM+FG  +++Q+          
Sbjct: 197 GAIQGMSSLNVHSGLASSIESLSSINQDLHWKLQQQRLAMLFGGDNNNQKDHSGVNQIEN 256

Query: 243 --QQPQNKDIQNHNFFQPILFHNLHHQKSAPPSTTTTIASDQWFFPNQVTATNNIASRTV 259
             Q+PQ    QN    +P  F   + +K    S  T   S +WFF N   +     + T 
Sbjct: 257 LAQKPQPIMFQNLEISKPGTFPVGNSRKEQGSSGDTHTPSTEWFFGNSYAS----VTPTP 316

[Close]
BLAST of Lsi05G007940 vs. TAIR10
Match: AT5G65590.1 (AT5G65590.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-31
Identity = 71/117 (60.68%), Postives = 87/117 (74.36%), Query Frame = 1 

Query: 32  LKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKK-LKSS 91
           LKCPRC+S NTKFCYYNNYSL+QPRHFCK+CRRYWT+GGALRNVPIGGGCRKTKK +K +
Sbjct: 41  LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPN 100

Query: 92  SS-----SSSSSAKFFTGISPP-----PPPLSVDF--GGIGGDQGSCLHLASSIESL 136
           SS     SSSSS +FF+ I        PPP ++DF   G+  ++ + L L ++ E L
Sbjct: 101 SSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAGLSLNKMNDLQLLNNQEVL 157

[Close]
BLAST of Lsi05G007940 vs. TAIR10
Match: AT4G38000.1 (AT4G38000.1 DNA binding with one finger 4.7)

HSP 1 Score: 132.1 bits (331), Expect = 4.9e-31
Identity = 98/231 (42.42%), Postives = 118/231 (51.08%), Query Frame = 1 

Query: 32  LKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKS-- 91
           LKCPRCDS NTKFCYYNNYSL+QPRH+CK CRRYWT+GGALRNVPIGG  R   K  S  
Sbjct: 41  LKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTRNKNKPCSLQ 100

Query: 92  -------SSSSSSSSAKFFTGISPPPPPLSVDFGGIGG-----DQGSCLHLASSIESLSS 151
                   S+ +SS+++      P    + +  GG  G     D    L  +SSIESLSS
Sbjct: 101 VISSPPLFSNGTSSASRELVRNHPSTAMMMMSSGGFSGYMFPLDPNFNL-ASSSIESLSS 160

Query: 152 LNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHNFFQPILFHNLHHQKSAPPST 211
            NQDLH KLQQQRL            Q   P N+        + ++F N+   +  PPST
Sbjct: 161 FNQDLHQKLQQQRLVTSM------FLQDSLPVNE--------KTVMFQNV---ELIPPST 220

Query: 212 TTTIASDQWFFPNQVTATNNIASRTVDDGSGWNNNNNNDNDNDNHGVVQAW 249
            TT     W F    T            G G  + N+ DND D  G +  W
Sbjct: 221 VTT----DWVFDRFAT------------GGGATSGNHEDND-DGEGNLGNW 236

[Close]
BLAST of Lsi05G007940 vs. TAIR10
Match: AT2G28810.1 (AT2G28810.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 128.3 bits (321), Expect = 7.0e-30
Identity = 55/70 (78.57%), Postives = 63/70 (90.00%), Query Frame = 1 

Query: 30  GGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKS 89
           G LKCPRCDS NTKFCY+NNY+LTQPRHFCK CRRYWT+GGALRNVP+GGGCR+ KK KS
Sbjct: 92  GALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKS 151

Query: 90  SSSSSSSSAK 100
            +S SSSS++
Sbjct: 152 GNSKSSSSSQ 161

[Close]
BLAST of Lsi05G007940 vs. TAIR10
Match: AT2G37590.1 (AT2G37590.1 DNA binding with one finger 2.4)

HSP 1 Score: 125.2 bits (313), Expect = 6.0e-29
Identity = 51/66 (77.27%), Postives = 64/66 (96.97%), Query Frame = 1 

Query: 32  LKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 91
           LKCPRC+STNTKFCY+NNYSLTQPRHFCKTCRRYWT+GGALRNVP+GGGCR+ ++ KS+S
Sbjct: 89  LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSNS 148

Query: 92  SSSSSS 98
           +++++S
Sbjct: 149 NNNNNS 154

[Close]
BLAST of Lsi05G007940 vs. TAIR10
Match: AT5G62940.1 (AT5G62940.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 1 

Query: 33  KCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSS 92
           KCPRC+ST+TKFCYYNNYSL+QPR+FCKTCRRYWTKGG LRN+P+GGGCRK KK  SS+S
Sbjct: 74  KCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPSSSNS 133

Query: 93  SSSSSA 99
           SSS+S+
Sbjct: 134 SSSTSS 139

[Close]
BLAST of Lsi05G007940 vs. NCBI nr
Match: gi|659098614|ref|XP_008450228.1| (PREDICTED: dof zinc finger protein DOF5.7 [Cucumis melo])

HSP 1 Score: 365.9 bits (938), Expect = 5.7e-98
Identity = 205/263 (77.95%), Postives = 218/263 (82.89%), Query Frame = 1 

Query: 3   QKSSTTGGRRKENNNNNNNGDHCDEEL-GGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKT 62
           QKSST  GRRKEN N    GD+C+EEL G +KCPRCDSTNTKFCYYNNYSLTQPRHFCKT
Sbjct: 11  QKSST--GRRKENKN----GDNCEEELLGSIKCPRCDSTNTKFCYYNNYSLTQPRHFCKT 70

Query: 63  CRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSSAKFFTGISPPP--PPLSVDFGGI- 122
           CRRYWTKGGALRNVPIGGGCRKTKKLK SSSSSSSSAKFFTGI PPP  PP SVDFGGI 
Sbjct: 71  CRRYWTKGGALRNVPIGGGCRKTKKLK-SSSSSSSSAKFFTGIIPPPPVPPPSVDFGGIG 130

Query: 123 GGDQGSCLHLASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHNF 182
           GG  GSCL LASSIESLSSLNQDLHWKLQQQRLAMI GD   ++QQQQQPQNK +QNHNF
Sbjct: 131 GGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGD---NEQQQQQPQNK-VQNHNF 190

Query: 183 FQPILFHNLHHQKSAPPST--TTTIASDQWFFPNQVTATNNIASRTVDD-GSGWNNNNNN 242
           FQPILFHNLHHQ S   ST  TTT  +DQW FP Q++A NN ASRT+DD   GWNNNN+N
Sbjct: 191 FQPILFHNLHHQDSPTTSTTITTTTTTDQWSFPTQLSAPNNGASRTIDDVRGGWNNNNSN 250

Query: 243 DNDNDNHGVVQAWEDLHHFTAFP 259
           D+ N     V+ WEDLHHFTAFP
Sbjct: 251 DDHNIG---VEGWEDLHHFTAFP 259

[Close]
BLAST of Lsi05G007940 vs. NCBI nr
Match: gi|449432966|ref|XP_004134269.1| (PREDICTED: dof zinc finger protein DOF5.7 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 4.5e-95
Identity = 198/265 (74.72%), Postives = 216/265 (81.51%), Query Frame = 1 

Query: 3   QKSSTTGGRRKENNNNNNNGDHCDEE--LGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCK 62
           QKSS+  GRRKEN N    GD+C+++  LGG+KCPRCDSTNTKFCYYNNYSLTQPRHFCK
Sbjct: 11  QKSSS--GRRKENKN----GDNCEDQELLGGVKCPRCDSTNTKFCYYNNYSLTQPRHFCK 70

Query: 63  TCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSSSSSSAKFFTGISP--PPPPLSVDFGGI 122
           TCRRYWTKGGALRNVPIGGGCRKTKKLK SSSSSSSSAKFFTGI P  P PP SVDFGG 
Sbjct: 71  TCRRYWTKGGALRNVPIGGGCRKTKKLK-SSSSSSSSAKFFTGIIPPLPVPPPSVDFGGT 130

Query: 123 GGDQGSCLHLASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHNF 182
           GG  GSCL LASSIESLSSLNQDLHWKLQQQRLAMI GDH     +Q  PQNK +QNHNF
Sbjct: 131 GGGGGSCLSLASSIESLSSLNQDLHWKLQQQRLAMILGDH-----EQPPPQNK-VQNHNF 190

Query: 183 FQPILFHNLHHQKSAPPSTTTTI----ASDQWFFPNQVTATNNIASRTVDDG-SGWNNNN 242
           FQPILFHNLHHQ S  P+TTTTI     +DQW FP Q++A NN ASR+++DG  GWNNNN
Sbjct: 191 FQPILFHNLHHQDS--PATTTTITTATTTDQWLFPTQLSAPNNGASRSINDGHGGWNNNN 250

Query: 243 NNDNDNDNHGVVQAWEDLHHFTAFP 259
           +ND+ N     V+ WEDLHHFTAFP
Sbjct: 251 SNDDHNIG---VEGWEDLHHFTAFP 257

[Close]
BLAST of Lsi05G007940 vs. NCBI nr
Match: gi|296090513|emb|CBI40844.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 196.1 bits (497), Expect = 7.8e-47
Identity = 126/255 (49.41%), Postives = 149/255 (58.43%), Query Frame = 1 

Query: 32  LKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 91
           LKCPRCDS NTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRK KK+KSSS
Sbjct: 120 LKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIKSSS 179

Query: 92  SSSSSSAKFFT-----------GISPPPPPL-----SVDFGGIGGDQGSC-LH--LASSI 151
             S+ S   F+           G + P P +     S  FGG   D GS  +H  LASSI
Sbjct: 180 RLSAVSTPCFSIDQPGSSSSLMGFNYPLPSVLKQGESGGFGGAIQDMGSMNVHSSLASSI 239

Query: 152 ESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHN-FFQPILFHNLHHQK 211
           ESLSS+NQDLHWKLQQQRLAM+FG  +   Q+     +   +N N   QPILF NL   K
Sbjct: 240 ESLSSINQDLHWKLQQQRLAMLFGGEN---QKDSSVSSVPPENQNQKLQPILFQNLEISK 299

Query: 212 -------SAPPSTTTTIASDQWFFPNQVTATNNIASRTVDDGSGWNNNNNNDNDNDNH-G 259
                  ++   + +   + +WFF      T    +          +   N NDN NH  
Sbjct: 300 PEVCAVGNSRKDSASGNPATEWFFDTYTPVTPTTTN---------TSTGGNGNDNTNHWN 359

[Close]
BLAST of Lsi05G007940 vs. NCBI nr
Match: gi|823207140|ref|XP_012437263.1| (PREDICTED: dof zinc finger protein DOF5.7-like [Gossypium raimondii])

HSP 1 Score: 177.6 bits (449), Expect = 2.9e-41
Identity = 134/347 (38.62%), Postives = 158/347 (45.53%), Query Frame = 1 

Query: 4   KSSTTGGRRKENNNNNNNGDHCDEELGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCR 63
           K +     +   N    +     ++   LKCPRCDS NTKFCYYNNYSLTQPRHFCKTCR
Sbjct: 9   KPAAKDENQSSGNRKTGSTRAAQDQQAALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCR 68

Query: 64  RYWTKGGALRNVPIGGGCRKTKKLKSSS-------------------------------- 123
           RYWTKGGALRNVPIGGGCRK KKLK SS                                
Sbjct: 69  RYWTKGGALRNVPIGGGCRKNKKLKPSSRLSSDSKDSISSSEMGGGLKFFHGLSPAMDFQ 128

Query: 124 ---------SSSSSS-----AKFFTGISPPPPPLSVDFGGIG----------------GD 183
                    +SS  +     A F    +PPP   ++D  G                  G 
Sbjct: 129 LGGLSLPRLNSSPPAIYNQFASFGDTDTPPPTSFTLDPSGSSTSLMGFNNYPLSSLTPGL 188

Query: 184 QGSCLH---------LASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQ-------- 243
            G+ L          LASSIESLSS+NQDLHWKLQQQRLAM+FG    +Q++        
Sbjct: 189 SGAILEMGSLNVSSGLASSIESLSSINQDLHWKLQQQRLAMLFGGGGENQKENTITTTAC 248

Query: 244 ----QQQPQNKDIQNHNFFQPILFHNLHHQK------SAPPSTTTTIASDQWFFPNQ--- 259
               + QPQ          QPILFHNL   K        P   TT   + +WFF N    
Sbjct: 249 SVPVENQPQR--------LQPILFHNLEISKPEISSVENPRKATTNENATEWFFGNSYAP 308

[Close]
BLAST of Lsi05G007940 vs. NCBI nr
Match: gi|590706483|ref|XP_007047735.1| (Dof-type zinc finger DNA-binding family protein [Theobroma cacao])

HSP 1 Score: 177.6 bits (449), Expect = 2.9e-41
Identity = 132/324 (40.74%), Postives = 151/324 (46.60%), Query Frame = 1 

Query: 13  KENNNNNNNGDHCDE--ELGGLKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGG 72
           KE N + +N        +   LKCPRCDS NTKFCYYNNYSLTQPRHFCKTCRRYWTKGG
Sbjct: 14  KEENQSGSNRKAASTRPQEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGG 73

Query: 73  ALRNVPIGGGCRKTKKLKSS-----------SSSSSSSAKFFTGISPPP---------PP 132
           ALRNVPIGGGCRK KK+KSS           SSS     KFF G+SP           P 
Sbjct: 74  ALRNVPIGGGCRKNKKIKSSSRLSGDSKDSTSSSEMGGLKFFHGLSPAMDFQLGGLSFPR 133

Query: 133 LSVDFGGI-------------------GGDQGSCL------------------------- 192
           L+    GI                    G   S +                         
Sbjct: 134 LNPSPAGIYNQFASFADSTSPSFSLDPSGSSNSLMGLSNYPLSSVTSGLSGAIQEMGSLN 193

Query: 193 ---HLASSIESLSSLNQDLHWKLQQQRLAMIFGDHDHHQQQQQQPQNKDIQNHNFFQPIL 252
               L SSIESLSS+NQDLHWKLQQQRLAM+FG  +  +         D Q     QPIL
Sbjct: 194 VNSSLTSSIESLSSINQDLHWKLQQQRLAMLFGGENQKENSTVSSVPLDNQAQK-PQPIL 253

Query: 253 FHNLHHQK------SAPPSTTTTIASDQWFFPNQ---VTATNNIASRTVDDGSGWNNNNN 259
           F NL   K        P   T+   + +WFF +    VT T   +S   D+ S WN    
Sbjct: 254 FQNLEVSKPEISAVGNPRKGTSNETATEWFFGSSYAPVTPTPTTSSNGNDNTSNWNG--- 313

The following BLAST results are available for this feature:
BLAST of Lsi05G007940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF57_ARATH6.6e-3060.68Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1[more]
DOF47_ARATH8.7e-3042.42Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7 PE=2 SV=1[more]
DOF22_ARATH1.3e-2878.57Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2[more]
DOF24_ARATH1.1e-2777.27Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1[more]
DOF56_ARATH2.4e-2780.30Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2[more]
BLAST of Lsi05G007940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2T9_CUCSA3.1e-9574.72Uncharacterized protein OS=Cucumis sativus GN=Csa_3G115040 PE=4 SV=1[more]
A0A061DI28_THECC2.0e-4140.74Dof-type zinc finger DNA-binding family protein OS=Theobroma cacao GN=TCM_000956... [more]
A0A0D2RCH5_GOSRA2.0e-4138.62Uncharacterized protein OS=Gossypium raimondii GN=B456_008G094000 PE=4 SV=1[more]
A0A0D2NVV6_GOSRA1.7e-4041.21Uncharacterized protein OS=Gossypium raimondii GN=B456_003G036800 PE=4 SV=1[more]
A0A0B2PBC7_GLYSO9.3e-3939.29Dof zinc finger protein DOF5.7 OS=Glycine soja GN=glysoja_024268 PE=4 SV=1[more]
BLAST of Lsi05G007940 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65590.13.7e-3160.68 Dof-type zinc finger DNA-binding family protein[more]
AT4G38000.14.9e-3142.42 DNA binding with one finger 4.7[more]
AT2G28810.17.0e-3078.57 Dof-type zinc finger DNA-binding family protein[more]
AT2G37590.16.0e-2977.27 DNA binding with one finger 2.4[more]
AT5G62940.11.3e-2880.30 Dof-type zinc finger DNA-binding family protein[more]
BLAST of Lsi05G007940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659098614|ref|XP_008450228.1|5.7e-9877.95PREDICTED: dof zinc finger protein DOF5.7 [Cucumis melo][more]
gi|449432966|ref|XP_004134269.1|4.5e-9574.72PREDICTED: dof zinc finger protein DOF5.7 [Cucumis sativus][more]
gi|296090513|emb|CBI40844.3|7.8e-4749.41unnamed protein product [Vitis vinifera][more]
gi|823207140|ref|XP_012437263.1|2.9e-4138.62PREDICTED: dof zinc finger protein DOF5.7-like [Gossypium raimondii][more]
gi|590706483|ref|XP_007047735.1|2.9e-4140.74Dof-type zinc finger DNA-binding family protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G007940.1Lsi05G007940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 30..86
score: 2.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 32..86
score: 2.8
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 34..70
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 32..86
score: 2
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 31..257
score: 1.3
NoneNo IPR availablePANTHERPTHR31992:SF34SUBFAMILY NOT NAMEDcoord: 31..257
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G007940Csa3G115040Cucumber (Chinese Long) v2culsiB198
Lsi05G007940CSPI03G06860Wild cucumber (PI 183967)cpilsiB197
Lsi05G007940Cucsa.260210Cucumber (Gy14) v1cgylsiB421
Lsi05G007940CmaCh04G008580Cucurbita maxima (Rimu)cmalsiB692
Lsi05G007940CmaCh16G007380Cucurbita maxima (Rimu)cmalsiB315
Lsi05G007940CmoCh16G007990Cucurbita moschata (Rifu)cmolsiB305
Lsi05G007940CmoCh04G009190Cucurbita moschata (Rifu)cmolsiB685
Lsi05G007940Cla014094Watermelon (97103) v1lsiwmB379
Lsi05G007940MELO3C014958Melon (DHL92) v3.5.1lsimeB380
Lsi05G007940ClCG10G008290Watermelon (Charleston Gray)lsiwcgB321
Lsi05G007940ClCG01G018270Watermelon (Charleston Gray)lsiwcgB329
Lsi05G007940MELO3C014958.2Melon (DHL92) v3.6.1lsimedB390
Lsi05G007940Cla97C10G191780Watermelon (97103) v2lsiwmbB325
Lsi05G007940Bhi11G000764Wax gourdlsiwgoB412
Lsi05G007940Cp4.1LG14g00790Cucurbita pepo (Zucchini)cpelsiB176
Lsi05G007940Cp4.1LG01g08950Cucurbita pepo (Zucchini)cpelsiB370
Lsi05G007940CsGy3G006980Cucumber (Gy14) v2cgyblsiB183
Lsi05G007940CsGy6G029150Cucumber (Gy14) v2cgyblsiB434
Lsi05G007940Carg05854Silver-seed gourdcarlsiB934
Lsi05G007940Carg14253Silver-seed gourdcarlsiB857
Lsi05G007940CsaV3_3G006960Cucumber (Chinese Long) v3cuclsiB217
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi05G007940Lsi01G008220Bottle gourd (USVL1VR-Ls)lsilsiB079
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G007940Watermelon (97103) v2lsiwmbB322
Lsi05G007940Watermelon (Charleston Gray)lsiwcgB318
Lsi05G007940Watermelon (97103) v1lsiwmB352