CmaCh04G008580 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G008580
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDof zinc finger protein
LocationCma_Chr04 : 4399160 .. 4400104 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCCCTCATCGCAAGAAGAAATCAGCCAAAACTCAGGCACAACAAGAACCAAATCATCGTCAAATACGAAACAACAGCAAACACAACAACAACAACCTCTGAAATGTCCTCGATGCGATTCCACCAACACCAAGTTTTGCTACTACAACAACTACTGCCTCACTCAACCTCGTCACTTTTGCAAGACCTGTCGTAGATATTGGACCAAAGGTGGCGCCTTGAGAAATGTCCCCATCGGTGGCGGCTGCCGGAAAACCAAAAAGCTCAAATCTTCTTCTTCCAATAATTCCAAACTCCCCTCCGGCGACACCCCTGCCTTCAGATTCTTTGCTGGAATCTCACCCTCCATTGATTTCCAATTGAATGGTAGTCTTGGAGTTGGACTTTCATCATCTTCACCACAATTATTCCCAACAACTCCCACCACAAATCATCCGTACATGGGCCTCAACTACGACACCAATTTCCCTCTAATTCACCACCACAATACCAGCTCAAATTTAAACCTCCAACCTCACTATAATACCAACACCACCCTTGCATCTTCAATTCAATCTTTGAGCTCTCTAAACCAAGACCTCCATTCTAAATTACAGCAACACCGGTTAGCTATGATATTTGGAGACCACGATCATGTGCAAAACAAGGATCAAAATCACAAATTGTTGCAACCCATTTTGTTTCACAATCTAGAGCCTCCAAAACAGGATAGTTGTTTCAATATCCATGATCCTAGAACACAATCTGCAACAGCTTCAACAACCGGGGAGGATGCTACTCCAACTGAATGGTTCTTCGGAAATAATTCTTATGATGATCGCCATAATCATCATCAAGTGAGTGCCACAAACAGTGCTGGTGGGAATGGGTGGAATCATACTAATAATAATAATGGAGTTCAAGCTTGGGAAGATTTGCACCATTTCACTGCCTTGCCCTGA

mRNA sequence

ATGAGGCCCTCATCGCAAGAAGAAATCAGCCAAAACTCAGGCACAACAAGAACCAAATCATCGTCAAATACGAAACAACAGCAAACACAACAACAACAACCTCTGAAATGTCCTCGATGCGATTCCACCAACACCAAGTTTTGCTACTACAACAACTACTGCCTCACTCAACCTCGTCACTTTTGCAAGACCTGTCGTAGATATTGGACCAAAGGTGGCGCCTTGAGAAATGTCCCCATCGGTGGCGGCTGCCGGAAAACCAAAAAGCTCAAATCTTCTTCTTCCAATAATTCCAAACTCCCCTCCGGCGACACCCCTGCCTTCAGATTCTTTGCTGGAATCTCACCCTCCATTGATTTCCAATTGAATGGTAGTCTTGGAGTTGGACTTTCATCATCTTCACCACAATTATTCCCAACAACTCCCACCACAAATCATCCGTACATGGGCCTCAACTACGACACCAATTTCCCTCTAATTCACCACCACAATACCAGCTCAAATTTAAACCTCCAACCTCACTATAATACCAACACCACCCTTGCATCTTCAATTCAATCTTTGAGCTCTCTAAACCAAGACCTCCATTCTAAATTACAGCAACACCGGTTAGCTATGATATTTGGAGACCACGATCATGTGCAAAACAAGGATCAAAATCACAAATTGTTGCAACCCATTTTGTTTCACAATCTAGAGCCTCCAAAACAGGATAGTTGTTTCAATATCCATGATCCTAGAACACAATCTGCAACAGCTTCAACAACCGGGGAGGATGCTACTCCAACTGAATGGTTCTTCGGAAATAATTCTTATGATGATCGCCATAATCATCATCAAGTGAGTGCCACAAACAGTGCTGGTGGGAATGGGTGGAATCATACTAATAATAATAATGGAGTTCAAGCTTGGGAAGATTTGCACCATTTCACTGCCTTGCCCTGA

Coding sequence (CDS)

ATGAGGCCCTCATCGCAAGAAGAAATCAGCCAAAACTCAGGCACAACAAGAACCAAATCATCGTCAAATACGAAACAACAGCAAACACAACAACAACAACCTCTGAAATGTCCTCGATGCGATTCCACCAACACCAAGTTTTGCTACTACAACAACTACTGCCTCACTCAACCTCGTCACTTTTGCAAGACCTGTCGTAGATATTGGACCAAAGGTGGCGCCTTGAGAAATGTCCCCATCGGTGGCGGCTGCCGGAAAACCAAAAAGCTCAAATCTTCTTCTTCCAATAATTCCAAACTCCCCTCCGGCGACACCCCTGCCTTCAGATTCTTTGCTGGAATCTCACCCTCCATTGATTTCCAATTGAATGGTAGTCTTGGAGTTGGACTTTCATCATCTTCACCACAATTATTCCCAACAACTCCCACCACAAATCATCCGTACATGGGCCTCAACTACGACACCAATTTCCCTCTAATTCACCACCACAATACCAGCTCAAATTTAAACCTCCAACCTCACTATAATACCAACACCACCCTTGCATCTTCAATTCAATCTTTGAGCTCTCTAAACCAAGACCTCCATTCTAAATTACAGCAACACCGGTTAGCTATGATATTTGGAGACCACGATCATGTGCAAAACAAGGATCAAAATCACAAATTGTTGCAACCCATTTTGTTTCACAATCTAGAGCCTCCAAAACAGGATAGTTGTTTCAATATCCATGATCCTAGAACACAATCTGCAACAGCTTCAACAACCGGGGAGGATGCTACTCCAACTGAATGGTTCTTCGGAAATAATTCTTATGATGATCGCCATAATCATCATCAAGTGAGTGCCACAAACAGTGCTGGTGGGAATGGGTGGAATCATACTAATAATAATAATGGAGTTCAAGCTTGGGAAGATTTGCACCATTTCACTGCCTTGCCCTGA

Protein sequence

MRPSSQEEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSNNSKLPSGDTPAFRFFAGISPSIDFQLNGSLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLIHHHNTSSNLNLQPHYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNKDQNHKLLQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSYDDRHNHHQVSATNSAGGNGWNHTNNNNGVQAWEDLHHFTALP
Homology
[Close]
BLAST of CmaCh04G008580 vs. Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.7e-46
Identity = 137/327 (41.90%), Postives = 179/327 (54.74%), Query Frame = 1 

Query: 13  SGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKG 72
           SGT++TK   ++   Q QQ   LKCPRC+S NTKFCYYNNY L+QPRHFCK+CRRYWT+G
Sbjct: 21  SGTSQTKKPPSSSVAQDQQN--LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRG 80

Query: 73  GALRNVPIGGGCRKTKKLKSSSSNNSKLPSGDTPAFRFFAGISP----------SIDFQL 132
           GALRNVPIGGGCRKTKK    +S+ + LPS  +   RFF+ I            ++DFQL
Sbjct: 81  GALRNVPIGGGCRKTKKSIKPNSSMNTLPSSSSSQ-RFFSSIMEDSSKFFPPPTTMDFQL 140

Query: 133 NGSLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLIHHHNTSSNLNLQPH--YNTNTT 192
            G L +   +    L         P M    + N P+    +  S L+L     +N N +
Sbjct: 141 AG-LSLNKMNDLQLLNNQEVLDLRPMMSSGRE-NTPV----DVGSGLSLMGFGDFNNNHS 200

Query: 193 -------------LASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNKDQNHKLLQPI 252
                        LASSI++LS LNQDLH +LQQ R+AM+FG+    + +    +  QPI
Sbjct: 201 PTGFTTAGASDGNLASSIETLSCLNQDLHWRLQQQRMAMLFGNS---KEETVVVERPQPI 260

Query: 253 LFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSYDDRHNHHQVSATNSA 312
           L+ NLE                S+ +S T +    TEW+FGNNS  D       +A    
Sbjct: 261 LYRNLEIV------------NSSSPSSPTKKGDNQTEWYFGNNS--DNEGVISNNANTGG 316

Query: 313 GGNGWNHTNNNNGVQAWEDLHHFTALP 315
           GG+ W     NNG+QAW DL+H+ ALP
Sbjct: 321 GGSEW-----NNGIQAWTDLNHYNALP 316

[Close]
BLAST of CmaCh04G008580 vs. Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 70/144 (48.61%), Postives = 89/144 (61.81%), Query Frame = 1 

Query: 35  LKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 94
           LKCPRC+STNTKFCY+NNY LTQPRHFCKTCRRYWT+GGALRNVP+GGGCR+ ++ KS+S
Sbjct: 89  LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSNS 148

Query: 95  --SNNSKLPSGDTPAFRFFAGISPSIDFQLNGSLGVGLSSSSPQLFP----TTPTTNH-- 154
             +NNS   S +T    F +G + +I   L+   G    S   Q+        PT NH  
Sbjct: 149 NNNNNSTATSNNT---SFSSGNASTISTILSSHYGGNQESILSQILSPARLMNPTYNHLG 208

Query: 155 -PYMGLNYDTNFPLIHHHNTSSNL 170
                   D N  L+++   S +L
Sbjct: 209 DLTSNTKTDNNMSLLNYGGLSQDL 229

[Close]
BLAST of CmaCh04G008580 vs. Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 1 

Query: 34  PLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSS 93
           P KCPRC+ST+TKFCYYNNY L+QPR+FCKTCRRYWTKGG LRN+P+GGGCRK KK  SS
Sbjct: 72  PQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKK-PSS 131

Query: 94  SSNNSKLPSGDTPA 108
           S+++S   SG  P+
Sbjct: 132 SNSSSSTSSGKKPS 144

[Close]
BLAST of CmaCh04G008580 vs. Swiss-Prot
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 59/90 (65.56%), Postives = 68/90 (75.56%), Query Frame = 1 

Query: 37  CPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSN 96
           CPRC S+NTKFCYYNNY LTQPR+FCK CRRYWTKGG+LRNVP+GGGCRK+++ KSSS N
Sbjct: 27  CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGN 86

Query: 97  NSKLP----SGDTPAFRFFAGISPSIDFQL 123
           N+K      SG+        G SPSID  L
Sbjct: 87  NTKTSLTANSGNP------GGGSPSIDLAL 110

[Close]
BLAST of CmaCh04G008580 vs. Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 7.1e-26
Identity = 57/79 (72.15%), Postives = 65/79 (82.28%), Query Frame = 1 

Query: 25 KQQQTQQ-----QQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVP 84
          KQQQ QQ     Q+ LKCPRCDS NTKFCYYNNY L+QPRHFCK+CRRYWTKGGALRNVP
Sbjct: 14 KQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVP 73

Query: 85 IGGGCRKTKKLKSSSSNNS 99
          +GGG RK    +S+SS++S
Sbjct: 74 VGGGSRKNATKRSTSSSSS 92

[Close]
BLAST of CmaCh04G008580 vs. TrEMBL
Match: V4SKT9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026011mg PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.4e-57
Identity = 152/345 (44.06%), Postives = 193/345 (55.94%), Query Frame = 1 

Query: 5   SQEEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKT 64
           ++EE    +G  +T S+         Q+Q LKCPRCDS NTKFCYYNNY LTQPRHFCKT
Sbjct: 15  TKEENQNPAGNRKTASTR-------PQEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKT 74

Query: 65  CRRYWTKGGALRNVPIGGGCRKTKKLKSSS----SNNSKLPSGDTPAFRFFAGISPSIDF 124
           CRRYWTKGGALRNVPIGGGCRK KK+KSSS     +     S +   F+FF G+SP++DF
Sbjct: 75  CRRYWTKGGALRNVPIGGGCRKNKKIKSSSRLSVDSKDSASSSEIGGFKFFHGLSPAMDF 134

Query: 125 QLNG------------------SLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLIHH 184
           QL G                  S G   S S   L P+  + NHP  G NY  +   I  
Sbjct: 135 QLGGLSFPRLNPSSAGICSQFSSFGDATSPSYFGLDPSASSANHPLTGFNYPLS--SIVA 194

Query: 185 HNTSSNLNLQPHYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNKDQNHK 244
           +     +      N N++LASSI+SLSS+NQDLH +LQQ RLAM+FG  +  +    + +
Sbjct: 195 NTFGGAVQEMGSLNVNSSLASSIESLSSINQDLHWRLQQQRLAMLFGGENQKETTVASAQ 254

Query: 245 L------LQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSYDDRH 304
           L       QPILF NLE   +     + + R + A+      ++T TEWFFGN       
Sbjct: 255 LETQTQKPQPILFQNLEISSKPQAPAVGNSRKEGASG-----ESTATEWFFGN------- 314

Query: 305 NHHQVSA----TNSAGGNGWNH---TNNNNGVQAWEDLHHFTALP 315
           ++  V+A    T S+GGNG N     N NNG Q W DLH ++ LP
Sbjct: 315 SYAPVTAGTPTTTSSGGNGGNDNTINNWNNGAQGWSDLHRYSGLP 338

[Close]
BLAST of CmaCh04G008580 vs. TrEMBL
Match: A0A0D2RCH5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G094000 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 6.0e-56
Identity = 162/350 (46.29%), Postives = 204/350 (58.29%), Query Frame = 1 

Query: 1   MRPSSQEEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRH 60
           ++P++++E +Q+SG  +T S+   + QQ      LKCPRCDS NTKFCYYNNY LTQPRH
Sbjct: 8   VKPAAKDE-NQSSGNRKTGSTRAAQDQQAA----LKCPRCDSPNTKFCYYNNYSLTQPRH 67

Query: 61  FCKTCRRYWTKGGALRNVPIGGGCRKTKKLK-----SSSSNNSKLPSGDTPAFRFFAGIS 120
           FCKTCRRYWTKGGALRNVPIGGGCRK KKLK     SS S +S   S      +FF G+S
Sbjct: 68  FCKTCRRYWTKGGALRNVPIGGGCRKNKKLKPSSRLSSDSKDSISSSEMGGGLKFFHGLS 127

Query: 121 PSIDFQLNGSLGVGLSSSSPQLF------------PTTPTTNHP------YMGLNYDTNF 180
           P++DFQL G     L+SS P ++            P T  T  P       MG N   N+
Sbjct: 128 PAMDFQLGGLSLPRLNSSPPAIYNQFASFGDTDTPPPTSFTLDPSGSSTSLMGFN---NY 187

Query: 181 PLIHHHNTSSNLNLQ-PHYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQN 240
           PL       S   L+    N ++ LASSI+SLSS+NQDLH KLQQ RLAM+FG     Q 
Sbjct: 188 PLSSLTPGLSGAILEMGSLNVSSGLASSIESLSSINQDLHWKLQQQRLAMLFGGGGENQK 247

Query: 241 K------------DQNHKLLQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTE 300
           +            +   + LQPILFHNLE  K +   ++ +PR      +TT E+A  TE
Sbjct: 248 ENTITTTACSVPVENQPQRLQPILFHNLEISKPE-ISSVENPR-----KATTNENA--TE 307

Query: 301 WFFGNNSYDDRHNHHQVSATNSAGGNGWNHTNNNNGVQAWEDLHHFTALP 315
           WFFGN+     +     + T S+ GN    T+N NGVQAW DLHH++ LP
Sbjct: 308 WFFGNS-----YAPVTPTPTTSSNGNDNTTTSNWNGVQAWNDLHHYSTLP 336

[Close]
BLAST of CmaCh04G008580 vs. TrEMBL
Match: A0A061DI28_THECC (Dof-type zinc finger DNA-binding family protein OS=Theobroma cacao GN=TCM_000956 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.3e-55
Identity = 152/342 (44.44%), Postives = 198/342 (57.89%), Query Frame = 1 

Query: 1   MRPSSQEEISQNSGTTRTKSSSNTKQQQTQ-QQQPLKCPRCDSTNTKFCYYNNYCLTQPR 60
           ++P+++EE          +S SN K   T+ Q+Q LKCPRCDS NTKFCYYNNY LTQPR
Sbjct: 9   VKPATKEE---------NQSGSNRKAASTRPQEQALKCPRCDSPNTKFCYYNNYSLTQPR 68

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS--SNNSK--LPSGDTPAFRFFAGIS 120
           HFCKTCRRYWTKGGALRNVPIGGGCRK KK+KSSS  S +SK    S +    +FF G+S
Sbjct: 69  HFCKTCRRYWTKGGALRNVPIGGGCRKNKKIKSSSRLSGDSKDSTSSSEMGGLKFFHGLS 128

Query: 121 PSIDFQLNG---------------SLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLI 180
           P++DFQL G                      S+SP        +++  MGL   +N+PL 
Sbjct: 129 PAMDFQLGGLSFPRLNPSPAGIYNQFASFADSTSPSFSLDPSGSSNSLMGL---SNYPLS 188

Query: 181 H-HHNTSSNLNLQPHYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNK-- 240
                 S  +      N N++L SSI+SLSS+NQDLH KLQQ RLAM+FG  +  +N   
Sbjct: 189 SVTSGLSGAIQEMGSLNVNSSLTSSIESLSSINQDLHWKLQQQRLAMLFGGENQKENSTV 248

Query: 241 -----DQNHKLLQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSY 300
                D   +  QPILF NLE  K +    + +PR  ++       + T TEWFFG+   
Sbjct: 249 SSVPLDNQAQKPQPILFQNLEVSKPE-ISAVGNPRKGTS-------NETATEWFFGS--- 308

Query: 301 DDRHNHHQVSATNSAGGNGWNHTNNNNGVQAWEDLHHFTALP 315
               ++  V+ T +   NG ++T+N NGVQAW DLH ++ LP
Sbjct: 309 ----SYAPVTPTPTTSSNGNDNTSNWNGVQAWNDLHQYSTLP 323

[Close]
BLAST of CmaCh04G008580 vs. TrEMBL
Match: F6I721_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0218g00040 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 8.1e-53
Identity = 158/351 (45.01%), Postives = 199/351 (56.70%), Query Frame = 1 

Query: 3   PSSQEEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFC 62
           P S++E +Q SG  +T +            Q LKCPRCDS NTKFCYYNNY LTQPRHFC
Sbjct: 10  PVSKDE-TQGSGGRKTGA-------HRPPDQVLKCPRCDSPNTKFCYYNNYSLTQPRHFC 69

Query: 63  KTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS--SNNSKL--PSGDTPAFRFFAGISPSI 122
           KTCRRYWTKGGALRNVPIGGGCRK KK+KSSS  S +SK    S +    +FF G+SP++
Sbjct: 70  KTCRRYWTKGGALRNVPIGGGCRKNKKIKSSSRLSGDSKDVGASSEMGGLKFFHGLSPAM 129

Query: 123 DFQLNGSLGVGLSSSSP----------QLFPTT---------------PTTNHPYMGLNY 182
           DFQL G     L SS+P           +  T+               P ++   MG NY
Sbjct: 130 DFQLGGLPFPRLHSSTPPVYNQFSSFGDISATSAASAAVSTPCFSIDQPGSSSSLMGFNY 189

Query: 183 DTNFPLIHHHNTSSNLNLQP--HYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDH 242
                L    +      +Q     N +++LASSI+SLSS+NQDLH KLQQ RLAM+FG  
Sbjct: 190 PLPSVLKQGESGGFGGAIQDMGSMNVHSSLASSIESLSSINQDLHWKLQQQRLAMLFGGE 249

Query: 243 DH-------VQNKDQNHKLLQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTE 302
           +        V  ++QN K LQPILF NLE  K + C  + + R  SA+ +        TE
Sbjct: 250 NQKDSSVSSVPPENQNQK-LQPILFQNLEISKPEVC-AVGNSRKDSASGNPA------TE 309

Query: 303 WFFGNNSYDDRHNHHQVSATN-SAGGNGWNHTNNNNGVQAWEDLHHFTALP 315
           WFF      D +     + TN S GGNG ++TN+ NG+QAW DLH ++ LP
Sbjct: 310 WFF------DTYTPVTPTTTNTSTGGNGNDNTNHWNGIQAWSDLHQYSTLP 338

[Close]
BLAST of CmaCh04G008580 vs. TrEMBL
Match: A0A0D2NVV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G036800 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.1e-52
Identity = 148/319 (46.39%), Postives = 177/319 (55.49%), Query Frame = 1 

Query: 7   EEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCR 66
           +E +Q  G+ +T S+         Q Q LKCPRCDS NTKFCYYNNY LTQPRHFCKTCR
Sbjct: 17  KEETQKGGSRKTSSTRT-------QDQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCR 76

Query: 67  RYWTKGGALRNVPIGGGCRKTKKLKSSSSNNSKLPSGDTP----AFRFFAGISPSIDFQL 126
           RYWTKGGALRNVPIGGGCRK KK+KSSS  +S  P G T       +FF  ISP++DFQL
Sbjct: 77  RYWTKGGALRNVPIGGGCRKNKKMKSSSRLSSGDPKGSTSEMGGGLKFFHDISPAMDFQL 136

Query: 127 NGSLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLIHHHNTSSNLNLQPHYNTNTT-- 186
                 GLS  SP         +      N     PL+   N        P   TN T  
Sbjct: 137 G-----GLSFQSPATGIYNQFASFGDGNNNSSVGSPLMGFSNYPQPF---PSVTTNLTGA 196

Query: 187 ---LASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNKDQNHKLLQPILFHNLEPPKQ 246
              + SS+ SLSS+NQDLH KLQQ RLA +  D    QN+ Q  K L PILF NLE  K 
Sbjct: 197 IPDMGSSLNSLSSINQDLHWKLQQQRLATMLFDGGE-QNQAQQQKPL-PILFQNLEVSKP 256

Query: 247 DSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSYDDRHNHHQVSATNSAGGNGWNHTNN 306
           ++   + +PR  + TA          EWFFGN+           + T S+ GN  N+T+N
Sbjct: 257 ENVSTMENPRKSNETAK---------EWFFGNS---------YATPTTSSNGNDNNNTSN 300

Query: 307 NNGVQA--WEDLHHFTALP 315
            NGVQ   W DL+ +T LP
Sbjct: 317 WNGVQVQPWNDLNQYTTLP 300

[Close]
BLAST of CmaCh04G008580 vs. TAIR10
Match: AT5G65590.1 (AT5G65590.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-47
Identity = 137/327 (41.90%), Postives = 179/327 (54.74%), Query Frame = 1 

Query: 13  SGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKG 72
           SGT++TK   ++   Q QQ   LKCPRC+S NTKFCYYNNY L+QPRHFCK+CRRYWT+G
Sbjct: 21  SGTSQTKKPPSSSVAQDQQN--LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRG 80

Query: 73  GALRNVPIGGGCRKTKKLKSSSSNNSKLPSGDTPAFRFFAGISP----------SIDFQL 132
           GALRNVPIGGGCRKTKK    +S+ + LPS  +   RFF+ I            ++DFQL
Sbjct: 81  GALRNVPIGGGCRKTKKSIKPNSSMNTLPSSSSSQ-RFFSSIMEDSSKFFPPPTTMDFQL 140

Query: 133 NGSLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLIHHHNTSSNLNLQPH--YNTNTT 192
            G L +   +    L         P M    + N P+    +  S L+L     +N N +
Sbjct: 141 AG-LSLNKMNDLQLLNNQEVLDLRPMMSSGRE-NTPV----DVGSGLSLMGFGDFNNNHS 200

Query: 193 -------------LASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNKDQNHKLLQPI 252
                        LASSI++LS LNQDLH +LQQ R+AM+FG+    + +    +  QPI
Sbjct: 201 PTGFTTAGASDGNLASSIETLSCLNQDLHWRLQQQRMAMLFGNS---KEETVVVERPQPI 260

Query: 253 LFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSYDDRHNHHQVSATNSA 312
           L+ NLE                S+ +S T +    TEW+FGNNS  D       +A    
Sbjct: 261 LYRNLEIV------------NSSSPSSPTKKGDNQTEWYFGNNS--DNEGVISNNANTGG 316

Query: 313 GGNGWNHTNNNNGVQAWEDLHHFTALP 315
           GG+ W     NNG+QAW DL+H+ ALP
Sbjct: 321 GGSEW-----NNGIQAWTDLNHYNALP 316

[Close]
BLAST of CmaCh04G008580 vs. TAIR10
Match: AT2G37590.1 (AT2G37590.1 DNA binding with one finger 2.4)

HSP 1 Score: 125.2 bits (313), Expect = 7.3e-29
Identity = 70/144 (48.61%), Postives = 89/144 (61.81%), Query Frame = 1 

Query: 35  LKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS 94
           LKCPRC+STNTKFCY+NNY LTQPRHFCKTCRRYWT+GGALRNVP+GGGCR+ ++ KS+S
Sbjct: 89  LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTKSNS 148

Query: 95  --SNNSKLPSGDTPAFRFFAGISPSIDFQLNGSLGVGLSSSSPQLFP----TTPTTNH-- 154
             +NNS   S +T    F +G + +I   L+   G    S   Q+        PT NH  
Sbjct: 149 NNNNNSTATSNNT---SFSSGNASTISTILSSHYGGNQESILSQILSPARLMNPTYNHLG 208

Query: 155 -PYMGLNYDTNFPLIHHHNTSSNL 170
                   D N  L+++   S +L
Sbjct: 209 DLTSNTKTDNNMSLLNYGGLSQDL 229

[Close]
BLAST of CmaCh04G008580 vs. TAIR10
Match: AT5G62940.1 (AT5G62940.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-27
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 1 

Query: 34  PLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSS 93
           P KCPRC+ST+TKFCYYNNY L+QPR+FCKTCRRYWTKGG LRN+P+GGGCRK KK  SS
Sbjct: 72  PQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKK-PSS 131

Query: 94  SSNNSKLPSGDTPA 108
           S+++S   SG  P+
Sbjct: 132 SNSSSSTSSGKKPS 144

[Close]
BLAST of CmaCh04G008580 vs. TAIR10
Match: AT3G52440.1 (AT3G52440.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-27
Identity = 59/90 (65.56%), Postives = 68/90 (75.56%), Query Frame = 1 

Query: 37  CPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSSSN 96
           CPRC S+NTKFCYYNNY LTQPR+FCK CRRYWTKGG+LRNVP+GGGCRK+++ KSSS N
Sbjct: 27  CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGN 86

Query: 97  NSKLP----SGDTPAFRFFAGISPSIDFQL 123
           N+K      SG+        G SPSID  L
Sbjct: 87  NTKTSLTANSGNP------GGGSPSIDLAL 110

[Close]
BLAST of CmaCh04G008580 vs. TAIR10
Match: AT3G21270.1 (AT3G21270.1 DOF zinc finger protein 2)

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-27
Identity = 57/79 (72.15%), Postives = 65/79 (82.28%), Query Frame = 1 

Query: 25 KQQQTQQ-----QQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCRRYWTKGGALRNVP 84
          KQQQ QQ     Q+ LKCPRCDS NTKFCYYNNY L+QPRHFCK+CRRYWTKGGALRNVP
Sbjct: 14 KQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVP 73

Query: 85 IGGGCRKTKKLKSSSSNNS 99
          +GGG RK    +S+SS++S
Sbjct: 74 VGGGSRKNATKRSTSSSSS 92

[Close]
BLAST of CmaCh04G008580 vs. NCBI nr
Match: gi|567867235|ref|XP_006426240.1| (hypothetical protein CICLE_v10026011mg [Citrus clementina])

HSP 1 Score: 229.6 bits (584), Expect = 7.7e-57
Identity = 152/345 (44.06%), Postives = 193/345 (55.94%), Query Frame = 1 

Query: 5   SQEEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKT 64
           ++EE    +G  +T S+         Q+Q LKCPRCDS NTKFCYYNNY LTQPRHFCKT
Sbjct: 15  TKEENQNPAGNRKTASTR-------PQEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKT 74

Query: 65  CRRYWTKGGALRNVPIGGGCRKTKKLKSSS----SNNSKLPSGDTPAFRFFAGISPSIDF 124
           CRRYWTKGGALRNVPIGGGCRK KK+KSSS     +     S +   F+FF G+SP++DF
Sbjct: 75  CRRYWTKGGALRNVPIGGGCRKNKKIKSSSRLSVDSKDSASSSEIGGFKFFHGLSPAMDF 134

Query: 125 QLNG------------------SLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLIHH 184
           QL G                  S G   S S   L P+  + NHP  G NY  +   I  
Sbjct: 135 QLGGLSFPRLNPSSAGICSQFSSFGDATSPSYFGLDPSASSANHPLTGFNYPLS--SIVA 194

Query: 185 HNTSSNLNLQPHYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNKDQNHK 244
           +     +      N N++LASSI+SLSS+NQDLH +LQQ RLAM+FG  +  +    + +
Sbjct: 195 NTFGGAVQEMGSLNVNSSLASSIESLSSINQDLHWRLQQQRLAMLFGGENQKETTVASAQ 254

Query: 245 L------LQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSYDDRH 304
           L       QPILF NLE   +     + + R + A+      ++T TEWFFGN       
Sbjct: 255 LETQTQKPQPILFQNLEISSKPQAPAVGNSRKEGASG-----ESTATEWFFGN------- 314

Query: 305 NHHQVSA----TNSAGGNGWNH---TNNNNGVQAWEDLHHFTALP 315
           ++  V+A    T S+GGNG N     N NNG Q W DLH ++ LP
Sbjct: 315 SYAPVTAGTPTTTSSGGNGGNDNTINNWNNGAQGWSDLHRYSGLP 338

[Close]
BLAST of CmaCh04G008580 vs. NCBI nr
Match: gi|568823897|ref|XP_006466344.1| (PREDICTED: dof zinc finger protein DOF5.7-like [Citrus sinensis])

HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56
Identity = 152/345 (44.06%), Postives = 193/345 (55.94%), Query Frame = 1 

Query: 5   SQEEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKT 64
           ++EE    +G  +T S+         Q+Q LKCPRCDS NTKFCYYNNY LTQPRHFCKT
Sbjct: 15  TKEENQNPAGNRKTASTR-------PQEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKT 74

Query: 65  CRRYWTKGGALRNVPIGGGCRKTKKLKSSS----SNNSKLPSGDTPAFRFFAGISPSIDF 124
           CRRYWTKGGALRNVPIGGGCRK KK+KSSS     +     S +   F+FF G+SP++DF
Sbjct: 75  CRRYWTKGGALRNVPIGGGCRKNKKIKSSSRLSVDSKDSSSSSEIGGFKFFHGLSPAMDF 134

Query: 125 QLNG------------------SLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLIHH 184
           QL G                  S G   S S   L P+  + NHP  G NY  +   +  
Sbjct: 135 QLGGLSFPRLNPSSAGICSQFSSFGDATSPSYFGLDPSASSANHPLTGFNYPLS--SVVA 194

Query: 185 HNTSSNLNLQPHYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNKDQNHK 244
           +  S  +      N N +LASSI+SLSS+NQDLH +LQQ RLAM+FG  +  +    + +
Sbjct: 195 NTFSGAVQEMGSLNVNGSLASSIESLSSINQDLHWRLQQQRLAMLFGGENQKETTVASAQ 254

Query: 245 L------LQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSYDDRH 304
           L       QPILF NLE   +     + + R + A+      ++T TEWFFGN       
Sbjct: 255 LETQTQKPQPILFQNLEISSKPEAPAVGNSRKEGASG-----ESTATEWFFGN------- 314

Query: 305 NHHQVSA----TNSAGGNGWNH---TNNNNGVQAWEDLHHFTALP 315
           ++  V+A    T S+GGNG N     N NNG Q W DLH ++ LP
Sbjct: 315 SYAPVTAGTPTTTSSGGNGGNDNTINNWNNGAQGWSDLHRYSGLP 338

[Close]
BLAST of CmaCh04G008580 vs. NCBI nr
Match: gi|823139758|ref|XP_012469747.1| (PREDICTED: dof zinc finger protein DOF5.7 [Gossypium raimondii])

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56
Identity = 151/321 (47.04%), Postives = 187/321 (58.26%), Query Frame = 1 

Query: 7   EEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRHFCKTCR 66
           +E +Q  G+ +T S+         Q Q LKCPRCDS NTKFCYYNNY LTQPRHFCKTCR
Sbjct: 17  KEETQKGGSRKTSSTRT-------QDQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCR 76

Query: 67  RYWTKGGALRNVPIGGGCRKTKKLKSSSSNNSKLPSGDTP----AFRFFAGISPSIDFQL 126
           RYWTKGGALRNVPIGGGCRK KK+KSSS  +S  P G T       +FF  ISP++DFQL
Sbjct: 77  RYWTKGGALRNVPIGGGCRKNKKMKSSSRLSSGDPKGSTSEMGGGLKFFHDISPAMDFQL 136

Query: 127 NG------SLGVGLSSSSPQLFPTTPTTNHPYMGL-NYDTNFPLIHHHNTSSNLNLQPHY 186
            G      + G+    +S        +   P MG  NY   FP +  + T +  ++    
Sbjct: 137 GGLSFQSPATGIYNQFASFGDGNNNSSVGSPLMGFSNYPQPFPSVTTNLTGAIPDMGSSL 196

Query: 187 NTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNKDQNHKLLQPILFHNLEPP 246
           N N+ LASSI+SLSS+NQDLH KLQQ RLA +  D    QN+ Q  K L PILF NLE  
Sbjct: 197 NVNSNLASSIESLSSINQDLHWKLQQQRLATMLFDGGE-QNQAQQQKPL-PILFQNLEVS 256

Query: 247 KQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSYDDRHNHHQVSATNSAGGNGWNHT 306
           K ++   + +PR  + TA          EWFFGN+           + T S+ GN  N+T
Sbjct: 257 KPENVSTMENPRKSNETAK---------EWFFGNS---------YATPTTSSNGNDNNNT 310

Query: 307 NNNNGVQA--WEDLHHFTALP 315
           +N NGVQ   W DL+ +T LP
Sbjct: 317 SNWNGVQVQPWNDLNQYTTLP 310

[Close]
BLAST of CmaCh04G008580 vs. NCBI nr
Match: gi|823207140|ref|XP_012437263.1| (PREDICTED: dof zinc finger protein DOF5.7-like [Gossypium raimondii])

HSP 1 Score: 226.1 bits (575), Expect = 8.6e-56
Identity = 162/350 (46.29%), Postives = 204/350 (58.29%), Query Frame = 1 

Query: 1   MRPSSQEEISQNSGTTRTKSSSNTKQQQTQQQQPLKCPRCDSTNTKFCYYNNYCLTQPRH 60
           ++P++++E +Q+SG  +T S+   + QQ      LKCPRCDS NTKFCYYNNY LTQPRH
Sbjct: 8   VKPAAKDE-NQSSGNRKTGSTRAAQDQQAA----LKCPRCDSPNTKFCYYNNYSLTQPRH 67

Query: 61  FCKTCRRYWTKGGALRNVPIGGGCRKTKKLK-----SSSSNNSKLPSGDTPAFRFFAGIS 120
           FCKTCRRYWTKGGALRNVPIGGGCRK KKLK     SS S +S   S      +FF G+S
Sbjct: 68  FCKTCRRYWTKGGALRNVPIGGGCRKNKKLKPSSRLSSDSKDSISSSEMGGGLKFFHGLS 127

Query: 121 PSIDFQLNGSLGVGLSSSSPQLF------------PTTPTTNHP------YMGLNYDTNF 180
           P++DFQL G     L+SS P ++            P T  T  P       MG N   N+
Sbjct: 128 PAMDFQLGGLSLPRLNSSPPAIYNQFASFGDTDTPPPTSFTLDPSGSSTSLMGFN---NY 187

Query: 181 PLIHHHNTSSNLNLQ-PHYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQN 240
           PL       S   L+    N ++ LASSI+SLSS+NQDLH KLQQ RLAM+FG     Q 
Sbjct: 188 PLSSLTPGLSGAILEMGSLNVSSGLASSIESLSSINQDLHWKLQQQRLAMLFGGGGENQK 247

Query: 241 K------------DQNHKLLQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTE 300
           +            +   + LQPILFHNLE  K +   ++ +PR      +TT E+A  TE
Sbjct: 248 ENTITTTACSVPVENQPQRLQPILFHNLEISKPE-ISSVENPR-----KATTNENA--TE 307

Query: 301 WFFGNNSYDDRHNHHQVSATNSAGGNGWNHTNNNNGVQAWEDLHHFTALP 315
           WFFGN+     +     + T S+ GN    T+N NGVQAW DLHH++ LP
Sbjct: 308 WFFGNS-----YAPVTPTPTTSSNGNDNTTTSNWNGVQAWNDLHHYSTLP 336

[Close]
BLAST of CmaCh04G008580 vs. NCBI nr
Match: gi|590706483|ref|XP_007047735.1| (Dof-type zinc finger DNA-binding family protein [Theobroma cacao])

HSP 1 Score: 224.2 bits (570), Expect = 3.3e-55
Identity = 152/342 (44.44%), Postives = 198/342 (57.89%), Query Frame = 1 

Query: 1   MRPSSQEEISQNSGTTRTKSSSNTKQQQTQ-QQQPLKCPRCDSTNTKFCYYNNYCLTQPR 60
           ++P+++EE          +S SN K   T+ Q+Q LKCPRCDS NTKFCYYNNY LTQPR
Sbjct: 9   VKPATKEE---------NQSGSNRKAASTRPQEQALKCPRCDSPNTKFCYYNNYSLTQPR 68

Query: 61  HFCKTCRRYWTKGGALRNVPIGGGCRKTKKLKSSS--SNNSK--LPSGDTPAFRFFAGIS 120
           HFCKTCRRYWTKGGALRNVPIGGGCRK KK+KSSS  S +SK    S +    +FF G+S
Sbjct: 69  HFCKTCRRYWTKGGALRNVPIGGGCRKNKKIKSSSRLSGDSKDSTSSSEMGGLKFFHGLS 128

Query: 121 PSIDFQLNG---------------SLGVGLSSSSPQLFPTTPTTNHPYMGLNYDTNFPLI 180
           P++DFQL G                      S+SP        +++  MGL   +N+PL 
Sbjct: 129 PAMDFQLGGLSFPRLNPSPAGIYNQFASFADSTSPSFSLDPSGSSNSLMGL---SNYPLS 188

Query: 181 H-HHNTSSNLNLQPHYNTNTTLASSIQSLSSLNQDLHSKLQQHRLAMIFGDHDHVQNK-- 240
                 S  +      N N++L SSI+SLSS+NQDLH KLQQ RLAM+FG  +  +N   
Sbjct: 189 SVTSGLSGAIQEMGSLNVNSSLTSSIESLSSINQDLHWKLQQQRLAMLFGGENQKENSTV 248

Query: 241 -----DQNHKLLQPILFHNLEPPKQDSCFNIHDPRTQSATASTTGEDATPTEWFFGNNSY 300
                D   +  QPILF NLE  K +    + +PR  ++       + T TEWFFG+   
Sbjct: 249 SSVPLDNQAQKPQPILFQNLEVSKPE-ISAVGNPRKGTS-------NETATEWFFGS--- 308

Query: 301 DDRHNHHQVSATNSAGGNGWNHTNNNNGVQAWEDLHHFTALP 315
               ++  V+ T +   NG ++T+N NGVQAW DLH ++ LP
Sbjct: 309 ----SYAPVTPTPTTSSNGNDNTSNWNGVQAWNDLHQYSTLP 323

The following BLAST results are available for this feature:
BLAST of CmaCh04G008580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF57_ARATH4.7e-4641.90Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1[more]
DOF24_ARATH1.3e-2748.61Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1[more]
DOF56_ARATH1.9e-2671.62Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2[more]
DOF35_ARATH1.9e-2665.56Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1[more]
DOF31_ARATH7.1e-2672.15Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2[more]
BLAST of CmaCh04G008580 vs. TrEMBL
Match NameE-valueIdentityDescription
V4SKT9_9ROSI5.4e-5744.06Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026011mg PE=4 SV=1[more]
A0A0D2RCH5_GOSRA6.0e-5646.29Uncharacterized protein OS=Gossypium raimondii GN=B456_008G094000 PE=4 SV=1[more]
A0A061DI28_THECC2.3e-5544.44Dof-type zinc finger DNA-binding family protein OS=Theobroma cacao GN=TCM_000956... [more]
F6I721_VITVI8.1e-5345.01Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0218g00040 PE=4 SV=... [more]
A0A0D2NVV6_GOSRA3.1e-5246.39Uncharacterized protein OS=Gossypium raimondii GN=B456_003G036800 PE=4 SV=1[more]
BLAST of CmaCh04G008580 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65590.12.7e-4741.90 Dof-type zinc finger DNA-binding family protein[more]
AT2G37590.17.3e-2948.61 DNA binding with one finger 2.4[more]
AT5G62940.11.0e-2771.62 Dof-type zinc finger DNA-binding family protein[more]
AT3G52440.11.0e-2765.56 Dof-type zinc finger DNA-binding family protein[more]
AT3G21270.14.0e-2772.15 DOF zinc finger protein 2[more]
BLAST of CmaCh04G008580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|567867235|ref|XP_006426240.1|7.7e-5744.06hypothetical protein CICLE_v10026011mg [Citrus clementina][more]
gi|568823897|ref|XP_006466344.1|1.0e-5644.06PREDICTED: dof zinc finger protein DOF5.7-like [Citrus sinensis][more]
gi|823139758|ref|XP_012469747.1|2.9e-5647.04PREDICTED: dof zinc finger protein DOF5.7 [Gossypium raimondii][more]
gi|823207140|ref|XP_012437263.1|8.6e-5646.29PREDICTED: dof zinc finger protein DOF5.7-like [Gossypium raimondii][more]
gi|590706483|ref|XP_007047735.1|3.3e-5544.44Dof-type zinc finger DNA-binding family protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G008580.1CmaCh04G008580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 35..85
score: 1.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 33..89
score: 4.9
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 37..73
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 35..89
score: 29
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 7..313
score: 8.7
NoneNo IPR availablePANTHERPTHR31992:SF34SUBFAMILY NOT NAMEDcoord: 7..313
score: 8.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G008580Cucsa.260210Cucumber (Gy14) v1cgycmaB0721
CmaCh04G008580Csa3G115040Cucumber (Chinese Long) v2cmacuB702
CmaCh04G008580MELO3C014958Melon (DHL92) v3.5.1cmameB689
CmaCh04G008580ClCG01G018270Watermelon (Charleston Gray)cmawcgB639
CmaCh04G008580CSPI03G06860Wild cucumber (PI 183967)cmacpiB710
CmaCh04G008580CmoCh16G007990Cucurbita moschata (Rifu)cmacmoB700
CmaCh04G008580CmoCh04G009190Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G008580CmoCh03G008890Cucurbita moschata (Rifu)cmacmoB727
CmaCh04G008580Lsi05G007940Bottle gourd (USVL1VR-Ls)cmalsiB692
CmaCh04G008580Lsi01G008220Bottle gourd (USVL1VR-Ls)cmalsiB639
CmaCh04G008580Cp4.1LG14g00790Cucurbita pepo (Zucchini)cmacpeB714
CmaCh04G008580Cp4.1LG10g01600Cucurbita pepo (Zucchini)cmacpeB702
CmaCh04G008580Cp4.1LG01g08950Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G008580MELO3C014958.2Melon (DHL92) v3.6.1cmamedB781
CmaCh04G008580MELO3C007704.2Melon (DHL92) v3.6.1cmamedB804
CmaCh04G008580CsaV3_3G006960Cucumber (Chinese Long) v3cmacucB0837
CmaCh04G008580Cla97C10G191780Watermelon (97103) v2cmawmbB716
CmaCh04G008580Bhi11G000764Wax gourdcmawgoB0815
CmaCh04G008580CsGy3G006980Cucumber (Gy14) v2cgybcmaB416
CmaCh04G008580Carg05854Silver-seed gourdcarcmaB1414
CmaCh04G008580Carg14253Silver-seed gourdcarcmaB1288
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G008580CmaCh16G007380Cucurbita maxima (Rimu)cmacmaB350
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G008580Watermelon (Charleston Gray)cmawcgB614
CmaCh04G008580Watermelon (97103) v2cmawmbB718
CmaCh04G008580Wax gourdcmawgoB0822