Lsi01G008220 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G008220
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionDof zinc finger protein
Locationchr01 : 6510798 .. 6511739 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCCGGAGAAACTCGCGCCCGGTGGCTGCCGGCCGAAAAATGCTCAGGCAAAACCCACATCGGATCATAATCAGCAGCCACTCAAATGCCCTCGTTGCGATTCCCCCAACACTAAATTCTGTTACTACAACAATTATAGCCTAACTCAGCCTAGGTATTTCTGCAAGACCTGCCGCAGATACTGGACCAAAGGTGGGGCGTTGCGCAATGTTCCCGTCGGTGGCGGCTGCCGGAAAAATAAGAAGGTCAAATCGTCGTCGTCGTTGAGGCTACCGTCGTCGTCCAAGGATGACTCCGGTTCGTCCAATCGGGAAATCGGCCGGTTGGGTTTCTTCGTCAACGGGTTTTCGTCGGGTCAATTGGGTGGAAATCAAAATTCGTCTTTCTCCTCTGCTCCAACGACGGGTCCCTACGATCAGTTTGGAGTTTTTTCTGTCGATCAATCGAGAAGCTTAAATTCCTTCATTCCTTCCACCGGATTTGTTAATTCACTGAATGTGGACACGAGTCTCGCGTCTTCGATTGAGTCTTTGAGTTCTATGAATCAAGACCTTCACTGGAAACTGCAGCAGCAAAGACTGGCTATGCTATTTGGATCAGGACACAACAATACCGCCACTGATAAAAACAGGGGAGCACTTGAAGATCACTGCCAAGAACTGAATCCATGCTCATTTCAGAATCTGGAGATCTCGAAACCGGAGGCTTGCAATTCTTCCGATTTCAGTAATACAAGAAAAGAAACAGTGGCCGCAGCCGGAGCCAGAGCCGGAGGAGAACCTACGGCGGCCGATGAGTGGTTCTTTGGAGATTCTTATGCAGCCCCCTCAATGACGACGGGTGCGGCGGCAGCGGGATATAACTCCGGCGACAGCGCCGCCAGGTGCGATGGTGTTCAAGAGTGGCAAGATTTGCATCCATACACCCATTTACCGTAG

mRNA sequence

ATGTTGCCGGAGAAACTCGCGCCCGGTGGCTGCCGGCCGAAAAATGCTCAGGCAAAACCCACATCGGATCATAATCAGCAGCCACTCAAATGCCCTCGTTGCGATTCCCCCAACACTAAATTCTGTTACTACAACAATTATAGCCTAACTCAGCCTAGGTATTTCTGCAAGACCTGCCGCAGATACTGGACCAAAGGTGGGGCGTTGCGCAATGTTCCCGTCGGTGGCGGCTGCCGGAAAAATAAGAAGGTCAAATCGTCGTCGTCGTTGAGGCTACCGTCGTCGTCCAAGGATGACTCCGGTTCGTCCAATCGGGAAATCGGCCGGTTGGGTTTCTTCGTCAACGGGTTTTCGTCGGGTCAATTGGGTGGAAATCAAAATTCGTCTTTCTCCTCTGCTCCAACGACGGGTCCCTACGATCAGTTTGGAGTTTTTTCTGTCGATCAATCGAGAAGCTTAAATTCCTTCATTCCTTCCACCGGATTTGTTAATTCACTGAATGTGGACACGAGTCTCGCGTCTTCGATTGAGTCTTTGAGTTCTATGAATCAAGACCTTCACTGGAAACTGCAGCAGCAAAGACTGGCTATGCTATTTGGATCAGGACACAACAATACCGCCACTGATAAAAACAGGGGAGCACTTGAAGATCACTGCCAAGAACTGAATCCATGCTCATTTCAGAATCTGGAGATCTCGAAACCGGAGGCTTGCAATTCTTCCGATTTCAGTAATACAAGAAAAGAAACAGTGGCCGCAGCCGGAGCCAGAGCCGGAGGAGAACCTACGGCGGCCGATGAGTGGTTCTTTGGAGATTCTTATGCAGCCCCCTCAATGACGACGGGTGCGGCGGCAGCGGGATATAACTCCGGCGACAGCGCCGCCAGGTGCGATGGTGTTCAAGAGTGGCAAGATTTGCATCCATACACCCATTTACCGTAG

Coding sequence (CDS)

ATGTTGCCGGAGAAACTCGCGCCCGGTGGCTGCCGGCCGAAAAATGCTCAGGCAAAACCCACATCGGATCATAATCAGCAGCCACTCAAATGCCCTCGTTGCGATTCCCCCAACACTAAATTCTGTTACTACAACAATTATAGCCTAACTCAGCCTAGGTATTTCTGCAAGACCTGCCGCAGATACTGGACCAAAGGTGGGGCGTTGCGCAATGTTCCCGTCGGTGGCGGCTGCCGGAAAAATAAGAAGGTCAAATCGTCGTCGTCGTTGAGGCTACCGTCGTCGTCCAAGGATGACTCCGGTTCGTCCAATCGGGAAATCGGCCGGTTGGGTTTCTTCGTCAACGGGTTTTCGTCGGGTCAATTGGGTGGAAATCAAAATTCGTCTTTCTCCTCTGCTCCAACGACGGGTCCCTACGATCAGTTTGGAGTTTTTTCTGTCGATCAATCGAGAAGCTTAAATTCCTTCATTCCTTCCACCGGATTTGTTAATTCACTGAATGTGGACACGAGTCTCGCGTCTTCGATTGAGTCTTTGAGTTCTATGAATCAAGACCTTCACTGGAAACTGCAGCAGCAAAGACTGGCTATGCTATTTGGATCAGGACACAACAATACCGCCACTGATAAAAACAGGGGAGCACTTGAAGATCACTGCCAAGAACTGAATCCATGCTCATTTCAGAATCTGGAGATCTCGAAACCGGAGGCTTGCAATTCTTCCGATTTCAGTAATACAAGAAAAGAAACAGTGGCCGCAGCCGGAGCCAGAGCCGGAGGAGAACCTACGGCGGCCGATGAGTGGTTCTTTGGAGATTCTTATGCAGCCCCCTCAATGACGACGGGTGCGGCGGCAGCGGGATATAACTCCGGCGACAGCGCCGCCAGGTGCGATGGTGTTCAAGAGTGGCAAGATTTGCATCCATACACCCATTTACCGTAG

Protein sequence

MLPEKLAPGGCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGCRKNKKVKSSSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSGQLGGNQNSSFSSAPTTGPYDQFGVFSVDQSRSLNSFIPSTGFVNSLNVDTSLASSIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELNPCSFQNLEISKPEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSMTTGAAAAGYNSGDSAARCDGVQEWQDLHPYTHLP
Homology
[Close]
BLAST of Lsi01G008220 vs. Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.2e-44
Identity = 132/320 (41.25%), Postives = 170/320 (53.12%), Query Frame = 1 

Query: 19  KPTSD---HNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVG 78
           KP S     +QQ LKCPRC+SPNTKFCYYNNYSL+QPR+FCK+CRRYWT+GGALRNVP+G
Sbjct: 28  KPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIG 87

Query: 79  GGCRKNKK-VKSSSSLR-LPSSSK---------DDSGS-----SNREIGRLGFFVNGFSS 138
           GGCRK KK +K +SS+  LPSSS          +DS       +  +    G  +N  + 
Sbjct: 88  GGCRKTKKSIKPNSSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAGLSLNKMND 147

Query: 139 GQLGGNQN-----SSFSSAPTTGPYDQFGVFSVDQSRSLNSFIPSTGFVNSLNVDTSLAS 198
            QL  NQ         SS     P D     S+      N+    TGF  +   D +LAS
Sbjct: 148 LQLLNNQEVLDLRPMMSSGRENTPVDVGSGLSLMGFGDFNNNHSPTGFTTAGASDGNLAS 207

Query: 199 SIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELNPCSFQNLEISK 258
           SIE+LS +NQDLHW+LQQQR+AMLFG+    T             +   P  ++NLEI  
Sbjct: 208 SIETLSCLNQDLHWRLQQQRMAMLFGNSKEETVV----------VERPQPILYRNLEI-- 267

Query: 259 PEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSMTTGAAAAGYNSGDSA 314
               NSS  S+  K+         G   T   EW+FG++    S   G  +   N+G   
Sbjct: 268 ---VNSSSPSSPTKK---------GDNQT---EWYFGNN----SDNEGVISNNANTGGGG 316

[Close]
BLAST of Lsi01G008220 vs. Swiss-Prot
Match: DOF47_ARATH (Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.8e-29
Identity = 81/193 (41.97%), Postives = 104/193 (53.89%), Query Frame = 1 

Query: 3   PEKLAPGGCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRY 62
           P ++      P+    K  S   Q  LKCPRCDS NTKFCYYNNYSL+QPR++CK CRRY
Sbjct: 15  PRRIKTTAKPPRQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRY 74

Query: 63  WTKGGALRNVPVGGGCRKNKKVKSSSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSGQL 122
           WT+GGALRNVP+GG  R   K  S   +  P    + + S++RE+ R             
Sbjct: 75  WTRGGALRNVPIGGSTRNKNKPCSLQVISSPPLFSNGTSSASRELVR------------- 134

Query: 123 GGNQNSSFSSAPTTGPYDQFGVFSVDQSRSLNSFIPSTGFVNSLNVDTSLASSIESLSSM 182
             N  S+     ++G +  + +F +D + +L S                  SSIESLSS 
Sbjct: 135 --NHPSTAMMMMSSGGFSGY-MFPLDPNFNLAS------------------SSIESLSSF 173

Query: 183 NQDLHWKLQQQRL 196
           NQDLH KLQQQRL
Sbjct: 195 NQDLHQKLQQQRL 173

[Close]
BLAST of Lsi01G008220 vs. Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.8e-28
Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 1 

Query: 19  KPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGC 78
           +P  DH   P KCPRC+S +TKFCYYNNYSL+QPRYFCKTCRRYWTKGG LRN+PVGGGC
Sbjct: 66  RPPHDH---PQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 125

Query: 79  RKNKKVKSSSSLRLPSSSKDDS 101
           RKNKK  SS+S    SS K  S
Sbjct: 126 RKNKKPSSSNSSSSTSSGKKPS 144

[Close]
BLAST of Lsi01G008220 vs. Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.8e-28
Identity = 76/168 (45.24%), Postives = 96/168 (57.14%), Query Frame = 1 

Query: 28  PLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGCRKNKKVKSS 87
           PLKCPRCDS NTKFCYYNNY+LTQPR+FCK CRRYWT+GGALRNVPVGGGCR+N K   +
Sbjct: 76  PLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKN 135

Query: 88  SSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSGQLGGNQNSSFSSAPTTGPYDQFGVFSV 147
            +L+  SSS   S S N +           SSGQL  N    FS  PT     Q G   +
Sbjct: 136 GNLKSSSSSSKQSSSVNAQ---------SPSSGQLRTNHQFPFS--PTLYNLTQLGGIGL 195

Query: 148 --------DQSRSLNS--FIPSTGFVNSLNVDTSLASSIESLSSMNQD 186
                   +Q+  + S   +   GF++  N  T +  +I   ++ N +
Sbjct: 196 NLAATNGNNQAHQIGSSLMMSDLGFLHGRNTSTPMTGNIHENNNNNNN 232

[Close]
BLAST of Lsi01G008220 vs. Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.3e-27
Identity = 59/89 (66.29%), Postives = 66/89 (74.16%), Query Frame = 1 

Query: 8   PGGCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGG 67
           P    P   +A+P  D   Q L CPRC+S NTKFCYYNNYSLTQPRYFCK CRRYWT GG
Sbjct: 31  PSPATPVERKARPEKD---QALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGG 90

Query: 68  ALRNVPVGGGCRKNKKVKSSSSLRLPSSS 97
           +LRN+PVGGG RKNK+  S+SS   PSSS
Sbjct: 91  SLRNIPVGGGVRKNKRSSSNSSSSSPSSS 116

[Close]
BLAST of Lsi01G008220 vs. TrEMBL
Match: A0A0A0KJW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497370 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 8.1e-146
Identity = 281/325 (86.46%), Postives = 285/325 (87.69%), Query Frame = 1 

Query: 1   MLPEKLAPGGCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR 60
           MLPEKL  GG R    Q KP SDHNQ PLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR
Sbjct: 1   MLPEKLPSGGSR----QPKPISDHNQHPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR 60

Query: 61  RYWTKGGALRNVPVGGGCRKNKKVKSSS---SLRLPSSSKDDSGSSNREIGRLGFFVNGF 120
           RYWTKGGALRNVPVGGGCRKNKK+KSSS   SLRLPSSS DDSGSSN EIGRLGFFVNGF
Sbjct: 61  RYWTKGGALRNVPVGGGCRKNKKLKSSSSSPSLRLPSSSNDDSGSSNSEIGRLGFFVNGF 120

Query: 121 SSGQLGGNQNSSFSSAPTTGPYDQFGVFSVDQSRSL-NSFI-PSTGFVNSLNVDTSLASS 180
           SS QL GN+NSSFSSAPT G YDQFG FS+DQSRSL NSFI PSTGFVNSLNVDTSLASS
Sbjct: 121 SSAQLSGNRNSSFSSAPTMGLYDQFGGFSLDQSRSLNNSFINPSTGFVNSLNVDTSLASS 180

Query: 181 IESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRG-----ALEDHCQELNPCSFQNL 240
           IESLSSMNQDLHWKLQQQRLAMLFGSGHNNTA DKNRG     ALEDH QELNP SF+NL
Sbjct: 181 IESLSSMNQDLHWKLQQQRLAMLFGSGHNNTAIDKNRGVSSPIALEDHGQELNPGSFRNL 240

Query: 241 EISKPEAC-NSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSM-TTGAAAAGY 300
           EISKPEAC NSSDFSN RKETV  AGARAGGE   ADEWFFGDSY APSM TTGAAAAGY
Sbjct: 241 EISKPEACNNSSDFSNARKETVVDAGARAGGESAVADEWFFGDSYTAPSMTTTGAAAAGY 300

Query: 301 NSGDSAARCDGVQEWQDLHPYTHLP 314
           NSGDSAARCDGVQEW DLHPYTHLP
Sbjct: 301 NSGDSAARCDGVQEWHDLHPYTHLP 321

[Close]
BLAST of Lsi01G008220 vs. TrEMBL
Match: A0A061DI28_THECC (Dof-type zinc finger DNA-binding family protein OS=Theobroma cacao GN=TCM_000956 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-63
Identity = 163/332 (49.10%), Postives = 195/332 (58.73%), Query Frame = 1 

Query: 10  GCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGAL 69
           G   K A  +P     +Q LKCPRCDSPNTKFCYYNNYSLTQPR+FCKTCRRYWTKGGAL
Sbjct: 20  GSNRKAASTRP----QEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGAL 79

Query: 70  RNVPVGGGCRKNKKVKSSSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSG---QLGGNQ 129
           RNVP+GGGCRKNKK+KSSS  RL   SKD + SS  E+G L FF +G S     QLGG  
Sbjct: 80  RNVPIGGGCRKNKKIKSSS--RLSGDSKDSTSSS--EMGGLKFF-HGLSPAMDFQLGGLS 139

Query: 130 NSSFSSAPTTGPYDQFG--------VFSVDQSRSLNSFIPSTGF---------------V 189
               + +P  G Y+QF          FS+D S S NS +  + +               +
Sbjct: 140 FPRLNPSP-AGIYNQFASFADSTSPSFSLDPSGSSNSLMGLSNYPLSSVTSGLSGAIQEM 199

Query: 190 NSLNVDTSLASSIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELN 249
            SLNV++SL SSIESLSS+NQDLHWKLQQQRLAMLFG  +    +  +   L++  Q+  
Sbjct: 200 GSLNVNSSLTSSIESLSSINQDLHWKLQQQRLAMLFGGENQKENSTVSSVPLDNQAQKPQ 259

Query: 250 PCSFQNLEISKPEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYA--APSMTT 309
           P  FQNLE+SKPE               A    R G     A EWFFG SYA   P+ TT
Sbjct: 260 PILFQNLEVSKPEIS-------------AVGNPRKGTSNETATEWFFGSSYAPVTPTPTT 319

Query: 310 GAAAAGYNSGDSAARCDGVQEWQDLHPYTHLP 314
            +     N  D+ +  +GVQ W DLH Y+ LP
Sbjct: 320 SS-----NGNDNTSNWNGVQAWNDLHQYSTLP 323

[Close]
BLAST of Lsi01G008220 vs. TrEMBL
Match: A5BPT6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000435 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.6e-63
Identity = 167/326 (51.23%), Postives = 193/326 (59.20%), Query Frame = 1 

Query: 27  QPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGCRKNKKVKS 86
           Q LKCPRCDSPNTKFCYYNNYSLTQPR+FCKTCRRYWTKGGALRNVP+GGGCRKNKK+KS
Sbjct: 32  QVLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIKS 91

Query: 87  SSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSG---QLGG--------------NQNSS 146
           SS  RL   SKD   SS  E+G L FF +G S     QLGG              NQ SS
Sbjct: 92  SS--RLSGDSKDVGASS--EMGGLKFF-HGLSPAMDFQLGGLPFPRLHSSTPPVYNQFSS 151

Query: 147 FSSAPTTGPYD---QFGVFSVDQSRSLNSFI-------------PSTGF------VNSLN 206
           F     T           FS+DQ  S +S +              S GF      + S+N
Sbjct: 152 FGDISATSAASAAVSTPCFSIDQPGSSSSLMGFNXPLPSVLKQGESGGFGGAIQDMGSMN 211

Query: 207 VDTSLASSIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELNPCSF 266
           V +SLASSIESLSS+NQDLHWKLQQQRLAMLFG G N   +  +    E+  Q+L P  F
Sbjct: 212 VHSSLASSIESLSSINQDLHWKLQQQRLAMLFG-GENQKDSSVSSVPPENQNQKLQPILF 271

Query: 267 QNLEISKPEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSMTTGAAAAG 314
           QNLEISKPE C      N+RK++       A G P  A EWFF D+Y   + TT   + G
Sbjct: 272 QNLEISKPEVC---AVGNSRKDS-------ASGNP--ATEWFF-DTYTPVTPTTTNTSTG 331

[Close]
BLAST of Lsi01G008220 vs. TrEMBL
Match: F6I721_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0218g00040 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 4.3e-62
Identity = 167/326 (51.23%), Postives = 192/326 (58.90%), Query Frame = 1 

Query: 27  QPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGCRKNKKVKS 86
           Q LKCPRCDSPNTKFCYYNNYSLTQPR+FCKTCRRYWTKGGALRNVP+GGGCRKNKK+KS
Sbjct: 32  QVLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIKS 91

Query: 87  SSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSG---QLGG--------------NQNSS 146
           SS  RL   SKD   SS  E+G L FF +G S     QLGG              NQ SS
Sbjct: 92  SS--RLSGDSKDVGASS--EMGGLKFF-HGLSPAMDFQLGGLPFPRLHSSTPPVYNQFSS 151

Query: 147 FSSAPTTGPYDQ------FGVFSVDQSRSLNSF---IPST-------GF------VNSLN 206
           F     T           F +     S SL  F   +PS        GF      + S+N
Sbjct: 152 FGDISATSAASAAVSTPCFSIDQPGSSSSLMGFNYPLPSVLKQGESGGFGGAIQDMGSMN 211

Query: 207 VDTSLASSIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELNPCSF 266
           V +SLASSIESLSS+NQDLHWKLQQQRLAMLFG G N   +  +    E+  Q+L P  F
Sbjct: 212 VHSSLASSIESLSSINQDLHWKLQQQRLAMLFG-GENQKDSSVSSVPPENQNQKLQPILF 271

Query: 267 QNLEISKPEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSMTTGAAAAG 314
           QNLEISKPE C      N+RK++       A G P  A EWFF D+Y   + TT   + G
Sbjct: 272 QNLEISKPEVC---AVGNSRKDS-------ASGNP--ATEWFF-DTYTPVTPTTTNTSTG 331

[Close]
BLAST of Lsi01G008220 vs. TrEMBL
Match: U5G4P2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s09520g PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-60
Identity = 164/358 (45.81%), Postives = 204/358 (56.98%), Query Frame = 1 

Query: 13  PKNAQAKPTS-DHNQ---------------QPLKCPRCDSPNTKFCYYNNYSLTQPRYFC 72
           P N Q K TS D NQ               Q LKCPRC+SPNTKFCYYNNYSLTQPR+FC
Sbjct: 4   PDNLQEKQTSKDDNQSSSSSRKTATTRPQEQALKCPRCESPNTKFCYYNNYSLTQPRHFC 63

Query: 73  KTCRRYWTKGGALRNVPVGGGCRKNKKVKSSSSLRLPSSSKDDSGSSNREIGRLGFF--- 132
           KTCRRYWTKGGALR+VP+GGGCRKNKK+KSSS  RL S SKD SGSS  EI    FF   
Sbjct: 64  KTCRRYWTKGGALRSVPIGGGCRKNKKIKSSS--RLSSDSKDSSGSS--EIAGFSFFHGL 123

Query: 133 -------VNGFSSGQLGGNQNSSFSSAPTTGPYDQFGVFS---VDQSRSLNSFIPSTGFV 192
                  + G S  +L  +QN  ++  P+ G        +      S +L+  + STG  
Sbjct: 124 SPAVDFNLGGLSFPRLNPSQNGLYNHFPSFGDISATSAAAATVTSPSFTLDPSVSSTGSC 183

Query: 193 N--------------------------SLNVDTSLASSIESLSSMNQDLHWKLQQQRLAM 252
           +                          S+N++T+L SSIESLS +NQDLHWKLQQQRLAM
Sbjct: 184 SLMGFNYPLTSVASGFCGAIQENIGGASMNINTNLPSSIESLSCINQDLHWKLQQQRLAM 243

Query: 253 LFGSGHNN-TATDKNRGALEDHCQELNPCSFQNLEISKPEACNSSDFSNTRKETVAAAGA 312
           LFG+G N+   +  +   +E+  Q+  P  F+NLEISKP+ C +    N+RKE     GA
Sbjct: 244 LFGTGENHKDGSTVSTDPIENQVQKPQPIMFENLEISKPQVCAA---GNSRKE-----GA 303

Query: 313 RAGGEPTAADEWFFGDSYAAPSMT-TGAAAAGYNSGDSAARCDGVQEWQDLHPYTHLP 314
            +G     A EWFFG+SY+  + T T  +  G N  D+    +GVQ W DLH Y+ LP
Sbjct: 304 ASG---DTATEWFFGNSYSQVTATPTNTSNNGNN--DNTGNWNGVQAWGDLHQYSALP 344

[Close]
BLAST of Lsi01G008220 vs. TAIR10
Match: AT5G65590.1 (AT5G65590.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 181.8 bits (460), Expect = 6.5e-46
Identity = 132/320 (41.25%), Postives = 170/320 (53.12%), Query Frame = 1 

Query: 19  KPTSD---HNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVG 78
           KP S     +QQ LKCPRC+SPNTKFCYYNNYSL+QPR+FCK+CRRYWT+GGALRNVP+G
Sbjct: 28  KPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIG 87

Query: 79  GGCRKNKK-VKSSSSLR-LPSSSK---------DDSGS-----SNREIGRLGFFVNGFSS 138
           GGCRK KK +K +SS+  LPSSS          +DS       +  +    G  +N  + 
Sbjct: 88  GGCRKTKKSIKPNSSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAGLSLNKMND 147

Query: 139 GQLGGNQN-----SSFSSAPTTGPYDQFGVFSVDQSRSLNSFIPSTGFVNSLNVDTSLAS 198
            QL  NQ         SS     P D     S+      N+    TGF  +   D +LAS
Sbjct: 148 LQLLNNQEVLDLRPMMSSGRENTPVDVGSGLSLMGFGDFNNNHSPTGFTTAGASDGNLAS 207

Query: 199 SIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELNPCSFQNLEISK 258
           SIE+LS +NQDLHW+LQQQR+AMLFG+    T             +   P  ++NLEI  
Sbjct: 208 SIETLSCLNQDLHWRLQQQRMAMLFGNSKEETVV----------VERPQPILYRNLEI-- 267

Query: 259 PEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSMTTGAAAAGYNSGDSA 314
               NSS  S+  K+         G   T   EW+FG++    S   G  +   N+G   
Sbjct: 268 ---VNSSSPSSPTKK---------GDNQT---EWYFGNN----SDNEGVISNNANTGGGG 316

[Close]
BLAST of Lsi01G008220 vs. TAIR10
Match: AT4G38000.1 (AT4G38000.1 DNA binding with one finger 4.7)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-30
Identity = 81/193 (41.97%), Postives = 104/193 (53.89%), Query Frame = 1 

Query: 3   PEKLAPGGCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRY 62
           P ++      P+    K  S   Q  LKCPRCDS NTKFCYYNNYSL+QPR++CK CRRY
Sbjct: 15  PRRIKTTAKPPRQINNKEPSPATQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRY 74

Query: 63  WTKGGALRNVPVGGGCRKNKKVKSSSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSGQL 122
           WT+GGALRNVP+GG  R   K  S   +  P    + + S++RE+ R             
Sbjct: 75  WTRGGALRNVPIGGSTRNKNKPCSLQVISSPPLFSNGTSSASRELVR------------- 134

Query: 123 GGNQNSSFSSAPTTGPYDQFGVFSVDQSRSLNSFIPSTGFVNSLNVDTSLASSIESLSSM 182
             N  S+     ++G +  + +F +D + +L S                  SSIESLSS 
Sbjct: 135 --NHPSTAMMMMSSGGFSGY-MFPLDPNFNLAS------------------SSIESLSSF 173

Query: 183 NQDLHWKLQQQRL 196
           NQDLH KLQQQRL
Sbjct: 195 NQDLHQKLQQQRL 173

[Close]
BLAST of Lsi01G008220 vs. TAIR10
Match: AT5G62940.1 (AT5G62940.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-29
Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 1 

Query: 19  KPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGC 78
           +P  DH   P KCPRC+S +TKFCYYNNYSL+QPRYFCKTCRRYWTKGG LRN+PVGGGC
Sbjct: 66  RPPHDH---PQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGC 125

Query: 79  RKNKKVKSSSSLRLPSSSKDDS 101
           RKNKK  SS+S    SS K  S
Sbjct: 126 RKNKKPSSSNSSSSTSSGKKPS 144

[Close]
BLAST of Lsi01G008220 vs. TAIR10
Match: AT1G07640.3 (AT1G07640.3 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-29
Identity = 76/168 (45.24%), Postives = 96/168 (57.14%), Query Frame = 1 

Query: 28  PLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGCRKNKKVKSS 87
           PLKCPRCDS NTKFCYYNNY+LTQPR+FCK CRRYWT+GGALRNVPVGGGCR+N K   +
Sbjct: 84  PLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKN 143

Query: 88  SSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSGQLGGNQNSSFSSAPTTGPYDQFGVFSV 147
            +L+  SSS   S S N +           SSGQL  N    FS  PT     Q G   +
Sbjct: 144 GNLKSSSSSSKQSSSVNAQ---------SPSSGQLRTNHQFPFS--PTLYNLTQLGGIGL 203

Query: 148 --------DQSRSLNS--FIPSTGFVNSLNVDTSLASSIESLSSMNQD 186
                   +Q+  + S   +   GF++  N  T +  +I   ++ N +
Sbjct: 204 NLAATNGNNQAHQIGSSLMMSDLGFLHGRNTSTPMTGNIHENNNNNNN 240

[Close]
BLAST of Lsi01G008220 vs. TAIR10
Match: AT1G64620.1 (AT1G64620.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 122.5 bits (306), Expect = 4.7e-28
Identity = 59/89 (66.29%), Postives = 66/89 (74.16%), Query Frame = 1 

Query: 8   PGGCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGG 67
           P    P   +A+P  D   Q L CPRC+S NTKFCYYNNYSLTQPRYFCK CRRYWT GG
Sbjct: 31  PSPATPVERKARPEKD---QALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGG 90

Query: 68  ALRNVPVGGGCRKNKKVKSSSSLRLPSSS 97
           +LRN+PVGGG RKNK+  S+SS   PSSS
Sbjct: 91  SLRNIPVGGGVRKNKRSSSNSSSSSPSSS 116

[Close]
BLAST of Lsi01G008220 vs. NCBI nr
Match: gi|659079931|ref|XP_008440523.1| (PREDICTED: dof zinc finger protein DOF5.7 [Cucumis melo])

HSP 1 Score: 527.7 bits (1358), Expect = 1.4e-146
Identity = 277/323 (85.76%), Postives = 284/323 (87.93%), Query Frame = 1 

Query: 1   MLPEKLAPGGCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR 60
           MLPEKL+ GG R      KP SDHNQ PLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR
Sbjct: 1   MLPEKLSSGGSR----HPKPISDHNQHPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR 60

Query: 61  RYWTKGGALRNVPVGGGCRKNKKVK---SSSSLRLPSSSKDDSGSSNREIGRLGFFVNGF 120
           RYWTKGGALRNVPVGGGCRKNKK+K   SSSSLRLPSSSKDDSGSSN EIGRLGFFVNGF
Sbjct: 61  RYWTKGGALRNVPVGGGCRKNKKLKSSSSSSSLRLPSSSKDDSGSSNLEIGRLGFFVNGF 120

Query: 121 SSGQLGGNQNSSFSSAPTTGPYDQFGVFSVDQSRSL-NSFIPSTGFVNSLNVDTSLASSI 180
           SSGQL G++NSSFSSAP+ G YDQFG FS+DQSRSL NSFIPSTGFVNSLNVDTSLASSI
Sbjct: 121 SSGQLSGSRNSSFSSAPSMGLYDQFGGFSLDQSRSLNNSFIPSTGFVNSLNVDTSLASSI 180

Query: 181 ESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRG-----ALEDHCQELNPCSFQNLE 240
           ESLSSMNQDLHWKLQQQRLAMLFGSGHNNTA DKNRG     A EDH QELNP SF+NLE
Sbjct: 181 ESLSSMNQDLHWKLQQQRLAMLFGSGHNNTAIDKNRGVSSPIAFEDHGQELNPGSFRNLE 240

Query: 241 ISKPEAC-NSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSMTTGAAAAGYNS 300
           ISKPEAC NSSDFSN RKETV  AGARAGGE   ADEWFFGDSY APSMTTG AAAGYNS
Sbjct: 241 ISKPEACNNSSDFSNARKETVVIAGARAGGESAVADEWFFGDSYTAPSMTTGTAAAGYNS 300

Query: 301 GDSAARCDGVQEWQDLHPYTHLP 314
           GDSAARCD VQEW DLHPYTHLP
Sbjct: 301 GDSAARCDDVQEWHDLHPYTHLP 319

[Close]
BLAST of Lsi01G008220 vs. NCBI nr
Match: gi|449451587|ref|XP_004143543.1| (PREDICTED: dof zinc finger protein DOF5.7 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 1.2e-145
Identity = 281/325 (86.46%), Postives = 285/325 (87.69%), Query Frame = 1 

Query: 1   MLPEKLAPGGCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR 60
           MLPEKL  GG R    Q KP SDHNQ PLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR
Sbjct: 1   MLPEKLPSGGSR----QPKPISDHNQHPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCR 60

Query: 61  RYWTKGGALRNVPVGGGCRKNKKVKSSS---SLRLPSSSKDDSGSSNREIGRLGFFVNGF 120
           RYWTKGGALRNVPVGGGCRKNKK+KSSS   SLRLPSSS DDSGSSN EIGRLGFFVNGF
Sbjct: 61  RYWTKGGALRNVPVGGGCRKNKKLKSSSSSPSLRLPSSSNDDSGSSNSEIGRLGFFVNGF 120

Query: 121 SSGQLGGNQNSSFSSAPTTGPYDQFGVFSVDQSRSL-NSFI-PSTGFVNSLNVDTSLASS 180
           SS QL GN+NSSFSSAPT G YDQFG FS+DQSRSL NSFI PSTGFVNSLNVDTSLASS
Sbjct: 121 SSAQLSGNRNSSFSSAPTMGLYDQFGGFSLDQSRSLNNSFINPSTGFVNSLNVDTSLASS 180

Query: 181 IESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRG-----ALEDHCQELNPCSFQNL 240
           IESLSSMNQDLHWKLQQQRLAMLFGSGHNNTA DKNRG     ALEDH QELNP SF+NL
Sbjct: 181 IESLSSMNQDLHWKLQQQRLAMLFGSGHNNTAIDKNRGVSSPIALEDHGQELNPGSFRNL 240

Query: 241 EISKPEAC-NSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSM-TTGAAAAGY 300
           EISKPEAC NSSDFSN RKETV  AGARAGGE   ADEWFFGDSY APSM TTGAAAAGY
Sbjct: 241 EISKPEACNNSSDFSNARKETVVDAGARAGGESAVADEWFFGDSYTAPSMTTTGAAAAGY 300

Query: 301 NSGDSAARCDGVQEWQDLHPYTHLP 314
           NSGDSAARCDGVQEW DLHPYTHLP
Sbjct: 301 NSGDSAARCDGVQEWHDLHPYTHLP 321

[Close]
BLAST of Lsi01G008220 vs. NCBI nr
Match: gi|590706483|ref|XP_007047735.1| (Dof-type zinc finger DNA-binding family protein [Theobroma cacao])

HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63
Identity = 163/332 (49.10%), Postives = 195/332 (58.73%), Query Frame = 1 

Query: 10  GCRPKNAQAKPTSDHNQQPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGAL 69
           G   K A  +P     +Q LKCPRCDSPNTKFCYYNNYSLTQPR+FCKTCRRYWTKGGAL
Sbjct: 20  GSNRKAASTRP----QEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGAL 79

Query: 70  RNVPVGGGCRKNKKVKSSSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSG---QLGGNQ 129
           RNVP+GGGCRKNKK+KSSS  RL   SKD + SS  E+G L FF +G S     QLGG  
Sbjct: 80  RNVPIGGGCRKNKKIKSSS--RLSGDSKDSTSSS--EMGGLKFF-HGLSPAMDFQLGGLS 139

Query: 130 NSSFSSAPTTGPYDQFG--------VFSVDQSRSLNSFIPSTGF---------------V 189
               + +P  G Y+QF          FS+D S S NS +  + +               +
Sbjct: 140 FPRLNPSP-AGIYNQFASFADSTSPSFSLDPSGSSNSLMGLSNYPLSSVTSGLSGAIQEM 199

Query: 190 NSLNVDTSLASSIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELN 249
            SLNV++SL SSIESLSS+NQDLHWKLQQQRLAMLFG  +    +  +   L++  Q+  
Sbjct: 200 GSLNVNSSLTSSIESLSSINQDLHWKLQQQRLAMLFGGENQKENSTVSSVPLDNQAQKPQ 259

Query: 250 PCSFQNLEISKPEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYA--APSMTT 309
           P  FQNLE+SKPE               A    R G     A EWFFG SYA   P+ TT
Sbjct: 260 PILFQNLEVSKPEIS-------------AVGNPRKGTSNETATEWFFGSSYAPVTPTPTT 319

Query: 310 GAAAAGYNSGDSAARCDGVQEWQDLHPYTHLP 314
            +     N  D+ +  +GVQ W DLH Y+ LP
Sbjct: 320 SS-----NGNDNTSNWNGVQAWNDLHQYSTLP 323

[Close]
BLAST of Lsi01G008220 vs. NCBI nr
Match: gi|147802317|emb|CAN63716.1| (hypothetical protein VITISV_000435 [Vitis vinifera])

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 167/326 (51.23%), Postives = 193/326 (59.20%), Query Frame = 1 

Query: 27  QPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGCRKNKKVKS 86
           Q LKCPRCDSPNTKFCYYNNYSLTQPR+FCKTCRRYWTKGGALRNVP+GGGCRKNKK+KS
Sbjct: 32  QVLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIKS 91

Query: 87  SSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSG---QLGG--------------NQNSS 146
           SS  RL   SKD   SS  E+G L FF +G S     QLGG              NQ SS
Sbjct: 92  SS--RLSGDSKDVGASS--EMGGLKFF-HGLSPAMDFQLGGLPFPRLHSSTPPVYNQFSS 151

Query: 147 FSSAPTTGPYD---QFGVFSVDQSRSLNSFI-------------PSTGF------VNSLN 206
           F     T           FS+DQ  S +S +              S GF      + S+N
Sbjct: 152 FGDISATSAASAAVSTPCFSIDQPGSSSSLMGFNXPLPSVLKQGESGGFGGAIQDMGSMN 211

Query: 207 VDTSLASSIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELNPCSF 266
           V +SLASSIESLSS+NQDLHWKLQQQRLAMLFG G N   +  +    E+  Q+L P  F
Sbjct: 212 VHSSLASSIESLSSINQDLHWKLQQQRLAMLFG-GENQKDSSVSSVPPENQNQKLQPILF 271

Query: 267 QNLEISKPEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSMTTGAAAAG 314
           QNLEISKPE C      N+RK++       A G P  A EWFF D+Y   + TT   + G
Sbjct: 272 QNLEISKPEVC---AVGNSRKDS-------ASGNP--ATEWFF-DTYTPVTPTTTNTSTG 331

[Close]
BLAST of Lsi01G008220 vs. NCBI nr
Match: gi|359495848|ref|XP_002266518.2| (PREDICTED: dof zinc finger protein DOF5.7 [Vitis vinifera])

HSP 1 Score: 246.5 bits (628), Expect = 6.1e-62
Identity = 167/326 (51.23%), Postives = 192/326 (58.90%), Query Frame = 1 

Query: 27  QPLKCPRCDSPNTKFCYYNNYSLTQPRYFCKTCRRYWTKGGALRNVPVGGGCRKNKKVKS 86
           Q LKCPRCDSPNTKFCYYNNYSLTQPR+FCKTCRRYWTKGGALRNVP+GGGCRKNKK+KS
Sbjct: 33  QVLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIKS 92

Query: 87  SSSLRLPSSSKDDSGSSNREIGRLGFFVNGFSSG---QLGG--------------NQNSS 146
           SS  RL   SKD   SS  E+G L FF +G S     QLGG              NQ SS
Sbjct: 93  SS--RLSGDSKDVGASS--EMGGLKFF-HGLSPAMDFQLGGLPFPRLHSSTPPVYNQFSS 152

Query: 147 FSSAPTTGPYDQ------FGVFSVDQSRSLNSF---IPST-------GF------VNSLN 206
           F     T           F +     S SL  F   +PS        GF      + S+N
Sbjct: 153 FGDISATSAASAAVSTPCFSIDQPGSSSSLMGFNYPLPSVLKQGESGGFGGAIQDMGSMN 212

Query: 207 VDTSLASSIESLSSMNQDLHWKLQQQRLAMLFGSGHNNTATDKNRGALEDHCQELNPCSF 266
           V +SLASSIESLSS+NQDLHWKLQQQRLAMLFG G N   +  +    E+  Q+L P  F
Sbjct: 213 VHSSLASSIESLSSINQDLHWKLQQQRLAMLFG-GENQKDSSVSSVPPENQNQKLQPILF 272

Query: 267 QNLEISKPEACNSSDFSNTRKETVAAAGARAGGEPTAADEWFFGDSYAAPSMTTGAAAAG 314
           QNLEISKPE C      N+RK++       A G P  A EWFF D+Y   + TT   + G
Sbjct: 273 QNLEISKPEVC---AVGNSRKDS-------ASGNP--ATEWFF-DTYTPVTPTTTNTSTG 332

The following BLAST results are available for this feature:
BLAST of Lsi01G008220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF57_ARATH1.2e-4441.25Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1[more]
DOF47_ARATH6.8e-2941.97Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7 PE=2 SV=1[more]
DOF56_ARATH5.8e-2871.95Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2[more]
DOF11_ARATH5.8e-2845.24Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2[more]
DOF18_ARATH8.3e-2766.29Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1[more]
BLAST of Lsi01G008220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJW6_CUCSA8.1e-14686.46Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497370 PE=4 SV=1[more]
A0A061DI28_THECC1.3e-6349.10Dof-type zinc finger DNA-binding family protein OS=Theobroma cacao GN=TCM_000956... [more]
A5BPT6_VITVI8.6e-6351.23Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000435 PE=4 SV=1[more]
F6I721_VITVI4.3e-6251.23Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0218g00040 PE=4 SV=... [more]
U5G4P2_POPTR1.0e-6045.81Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s09520g PE=4 SV=1[more]
BLAST of Lsi01G008220 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65590.16.5e-4641.25 Dof-type zinc finger DNA-binding family protein[more]
AT4G38000.13.8e-3041.97 DNA binding with one finger 4.7[more]
AT5G62940.13.2e-2971.95 Dof-type zinc finger DNA-binding family protein[more]
AT1G07640.33.2e-2945.24 Dof-type zinc finger DNA-binding family protein[more]
AT1G64620.14.7e-2866.29 Dof-type zinc finger DNA-binding family protein[more]
BLAST of Lsi01G008220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659079931|ref|XP_008440523.1|1.4e-14685.76PREDICTED: dof zinc finger protein DOF5.7 [Cucumis melo][more]
gi|449451587|ref|XP_004143543.1|1.2e-14586.46PREDICTED: dof zinc finger protein DOF5.7 [Cucumis sativus][more]
gi|590706483|ref|XP_007047735.1|1.9e-6349.10Dof-type zinc finger DNA-binding family protein [Theobroma cacao][more]
gi|147802317|emb|CAN63716.1|1.2e-6251.23hypothetical protein VITISV_000435 [Vitis vinifera][more]
gi|359495848|ref|XP_002266518.2|6.1e-6251.23PREDICTED: dof zinc finger protein DOF5.7 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G008220.1Lsi01G008220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 26..78
score: 1.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 27..83
score: 4.6
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 31..67
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 29..83
score: 29
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 19..312
score: 1.3
NoneNo IPR availablePANTHERPTHR31992:SF34SUBFAMILY NOT NAMEDcoord: 19..312
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G008220Csa6G497370Cucumber (Chinese Long) v2culsiB434
Lsi01G008220CSPI06G29640Wild cucumber (PI 183967)cpilsiB439
Lsi01G008220Cucsa.103860Cucumber (Gy14) v1cgylsiB125
Lsi01G008220CmaCh03G008510Cucurbita maxima (Rimu)cmalsiB597
Lsi01G008220CmaCh04G008580Cucurbita maxima (Rimu)cmalsiB639
Lsi01G008220CmoCh03G008890Cucurbita moschata (Rifu)cmolsiB582
Lsi01G008220Cla014094Watermelon (97103) v1lsiwmB144
Lsi01G008220MELO3C007704Melon (DHL92) v3.5.1lsimeB156
Lsi01G008220ClCG01G018270Watermelon (Charleston Gray)lsiwcgB127
Lsi01G008220MELO3C007704.2Melon (DHL92) v3.6.1lsimedB163
Lsi01G008220Cla97C01G017550Watermelon (97103) v2lsiwmbB115
Lsi01G008220Bhi03G001327Wax gourdlsiwgoB175
Lsi01G008220Cp4.1LG14g00790Cucurbita pepo (Zucchini)cpelsiB164
Lsi01G008220Cp4.1LG10g01600Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G008220CsGy6G029150Cucumber (Gy14) v2cgyblsiB398
Lsi01G008220Carg00737Silver-seed gourdcarlsiB364
Lsi01G008220Carg14253Silver-seed gourdcarlsiB855
Lsi01G008220CsaV3_6G044850Cucumber (Chinese Long) v3cuclsiB462
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi01G008220Lsi05G007940Bottle gourd (USVL1VR-Ls)lsilsiB079
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G008220Wax gourdlsiwgoB187
Lsi01G008220Wax gourdlsiwgoB197
Lsi01G008220Bottle gourd (USVL1VR-Ls)lsilsiB075
Lsi01G008220Bottle gourd (USVL1VR-Ls)lsilsiB084
Lsi01G008220Cucumber (Gy14) v1cgylsiB259
Lsi01G008220Cucumber (Gy14) v1cgylsiB502
Lsi01G008220Cucurbita maxima (Rimu)cmalsiB164
Lsi01G008220Cucurbita maxima (Rimu)cmalsiB718
Lsi01G008220Cucurbita maxima (Rimu)cmalsiB786
Lsi01G008220Cucurbita moschata (Rifu)cmolsiB002
Lsi01G008220Cucurbita moschata (Rifu)cmolsiB153
Lsi01G008220Cucurbita moschata (Rifu)cmolsiB155
Lsi01G008220Cucurbita moschata (Rifu)cmolsiB628
Lsi01G008220Cucurbita moschata (Rifu)cmolsiB707
Lsi01G008220Cucurbita moschata (Rifu)cmolsiB774
Lsi01G008220Cucurbita pepo (Zucchini)cpelsiB079
Lsi01G008220Cucurbita pepo (Zucchini)cpelsiB326
Lsi01G008220Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G008220Cucurbita pepo (Zucchini)cpelsiB664
Lsi01G008220Cucurbita pepo (Zucchini)cpelsiB666
Lsi01G008220Wild cucumber (PI 183967)cpilsiB102
Lsi01G008220Wild cucumber (PI 183967)cpilsiB165
Lsi01G008220Cucumber (Chinese Long) v2culsiB106
Lsi01G008220Cucumber (Chinese Long) v2culsiB166
Lsi01G008220Melon (DHL92) v3.5.1lsimeB136
Lsi01G008220Melon (DHL92) v3.5.1lsimeB143
Lsi01G008220Watermelon (Charleston Gray)lsiwcgB122
Lsi01G008220Watermelon (Charleston Gray)lsiwcgB152
Lsi01G008220Watermelon (97103) v1lsiwmB131
Lsi01G008220Watermelon (97103) v1lsiwmB166
Lsi01G008220Cucumber (Gy14) v2cgyblsiB094
Lsi01G008220Cucumber (Gy14) v2cgyblsiB151
Lsi01G008220Melon (DHL92) v3.6.1lsimedB150
Lsi01G008220Melon (DHL92) v3.6.1lsimedB143
Lsi01G008220Silver-seed gourdcarlsiB001
Lsi01G008220Silver-seed gourdcarlsiB053
Lsi01G008220Silver-seed gourdcarlsiB574
Lsi01G008220Cucumber (Chinese Long) v3cuclsiB114
Lsi01G008220Cucumber (Chinese Long) v3cuclsiB183
Lsi01G008220Watermelon (97103) v2lsiwmbB120
Lsi01G008220Watermelon (97103) v2lsiwmbB148