Lsi05G007130 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G007130
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr05 : 9673769 .. 9675755 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGGCGTCGGCAATGTTCAAAATCTTGATCAGGTCTTCTTCAGGTTGCACAAGAACAGTAAGAACAGAGACAGATGCATTCTGTTTTGTGATGTCAAGATTATACAGCGCGAGACGAAGCTGTGATCGAAGAAACCTCTTTGCGAGGATTAGTCCTCTCGGTGACCCTGAGCTTAGTGTAGTTCCGGTTCTTGATCAGTGGATTGAGGAAGGCAGGAAGATCAAGGACTTTGAGCTCCGGAGAATCGTTCGTGACCTTCGTACTTGCCGGCGGTATGGCCAAGCCCTTGAGGTGAGCGAAATTGAAAAACAAGCCCTAATTTCCCCTGAAAGGAATGCTTGTATTGTATATCATGTCTGTTGGATGAAGCAGTTTTTTTTTTTTTTTTTTTTTTTGGGTTTATTGTATGAATGAATGATGGCCAGAGAGTAATCTCAAATCCTTTTTCGTGTTCTATTCTCATAATGCTTTGATTGAATGCTGAAAAGACTGTGAAGCAATGCAACATCTTGTATATATGCATTTTGAATTTTGAAATAATTACATGTAGTTAAGCTAATTGTGTTCTTACACTCACCTTCACTACATTATGGCTCTAGAGGATAGCAAATATTTGTGTTATGTAATAATCATTGTAGAATTCTTGTGGTTACTGGTTAGCTTAGTACTAGGTTGATGCCTTAAGCTGTTTTTATCTCATTTGGTGTTTTATCAGTCCTAGATTTGATCTTTCAAATATGTACAGTATTGTGGTTGGTTGATCTTTGTTCTTTCTCTTGGTTTACTCAAATTGAAGGTGTCTGAATGGATGTGCAGCAAGGGACTTTTTTCCCTCACAACAAGAGACCTTGCCGTACAGCTCGATCTGATTGGCCGAGTTCGGGGATTGGATTCTGCCGAGATGTATTTCGGTAGTGTTTCTAACCGAGAGGAAGTTGGTAAACTCTATGGTGCTCTTTTAAATTGTTATGTCAGGGAAAACCTTATAGATAAGTCCCTTGCCCATATGCAGAAGATGAAGGAAATGGGTTTTGCTTCCTCTTCCCTCTGCTACAATGATATAATGTGTCTGTATTTGAACACTGGCCAGGCTGATAAGGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAATTCTTATGGAGCTAAGTCTGATGTAATCAGTATGGAGAAGGTTTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGACTACTTATTCAATGGTTGCCAATTTTTTCATAAAAGCTGGTATGCATGAGAAAGCAATGAATTATCTTCGGAAATGTGAGGACAAGGTCGATCGAGACACACTCGGCTTCAATCATCTCATTTCACACTACACCAATCTGGGATATAAAGATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGTGTAAGAAGCAAGTCAATAGAGATTATATAACCATGTTGAGTTCTTTAGTAAAGCTGGAGTTGCTCGAGGAAGCTGAGAATCTGCTCATGGAATGGGAGTCATCTTGCCAATGTTATGATTTTCGAGTTCCAAATGTCGTTCTTATCGGGTATTCGCAAAAGGGGTTAATTGAGAGAGCTGAAAAGATGCTTCGAAACATCATCAGAGATGGGAGGATCCCATCACCAAATAGTTGGGGCATTATTGCAGCTGGGTACTTGGAAAAGCAGAACCTGGAGAAAGCTTTTCAGAGCATGAAAGAAGCTCTTGCTGTAAAAGAACAAAATAAAGGGTGGAGGCCCAAACATAGCGTTTTATCAAGCATACTGCGATGGCTATCTGAGAATGGAAGATATGGAGAGCTAAAAGAGTTTTTGAGCTCATTGAAGACTGTACCTTCCATGGACGGAAAACTAAATAATGCCTTGGATGAGCTTCTAGAAACCTTGAAAAACGATGATGAAATAACGATGATGGGCGAATTAGAGGTGAGGTGA

mRNA sequence

ATGGCGGCGGCGTCGGCAATGTTCAAAATCTTGATCAGGTCTTCTTCAGGTTGCACAAGAACAGTAAGAACAGAGACAGATGCATTCTGTTTTGTGATGTCAAGATTATACAGCGCGAGACGAAGCTGTGATCGAAGAAACCTCTTTGCGAGGATTAGTCCTCTCGGTGACCCTGAGCTTAGTGTAGTTCCGGTTCTTGATCAGTGGATTGAGGAAGGCAGGAAGATCAAGGACTTTGAGCTCCGGAGAATCGTTCGTGACCTTCGTACTTGCCGGCGGTATGGCCAAGCCCTTGAGGTGTCTGAATGGATGTGCAGCAAGGGACTTTTTTCCCTCACAACAAGAGACCTTGCCGTACAGCTCGATCTGATTGGCCGAGTTCGGGGATTGGATTCTGCCGAGATGTATTTCGGTAGTGTTTCTAACCGAGAGGAAGTTGGTAAACTCTATGGTGCTCTTTTAAATTGTTATGTCAGGGAAAACCTTATAGATAAGTCCCTTGCCCATATGCAGAAGATGAAGGAAATGGGTTTTGCTTCCTCTTCCCTCTGCTACAATGATATAATGTGTCTGTATTTGAACACTGGCCAGGCTGATAAGGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAATTCTTATGGAGCTAAGTCTGATGTAATCAGTATGGAGAAGGTTTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGACTACTTATTCAATGGTTGCCAATTTTTTCATAAAAGCTGGTATGCATGAGAAAGCAATGAATTATCTTCGGAAATGTGAGGACAAGGTCGATCGAGACACACTCGGCTTCAATCATCTCATTTCACACTACACCAATCTGGGATATAAAGATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGTGTAAGAAGCAAGTCAATAGAGATTATATAACCATGTTGAGTTCTTTAGTAAAGCTGGAGTTGCTCGAGGAAGCTGAGAATCTGCTCATGGAATGGGAGTCATCTTGCCAATGTTATGATTTTCGAGTTCCAAATGTCGTTCTTATCGGGTATTCGCAAAAGGGGTTAATTGAGAGAGCTGAAAAGATGCTTCGAAACATCATCAGAGATGGGAGGATCCCATCACCAAATAGTTGGGGCATTATTGCAGCTGGGTACTTGGAAAAGCAGAACCTGGAGAAAGCTTTTCAGAGCATGAAAGAAGCTCTTGCTGTAAAAGAACAAAATAAAGGGTGGAGGCCCAAACATAGCGTTTTATCAAGCATACTGCGATGGCTATCTGAGAATGGAAGATATGGAGAGCTAAAAGAGTTTTTGAGCTCATTGAAGACTGTACCTTCCATGGACGGAAAACTAAATAATGCCTTGGATGAGCTTCTAGAAACCTTGAAAAACGATGATGAAATAACGATGATGGGCGAATTAGAGGTGAGGTGA

Coding sequence (CDS)

ATGGCGGCGGCGTCGGCAATGTTCAAAATCTTGATCAGGTCTTCTTCAGGTTGCACAAGAACAGTAAGAACAGAGACAGATGCATTCTGTTTTGTGATGTCAAGATTATACAGCGCGAGACGAAGCTGTGATCGAAGAAACCTCTTTGCGAGGATTAGTCCTCTCGGTGACCCTGAGCTTAGTGTAGTTCCGGTTCTTGATCAGTGGATTGAGGAAGGCAGGAAGATCAAGGACTTTGAGCTCCGGAGAATCGTTCGTGACCTTCGTACTTGCCGGCGGTATGGCCAAGCCCTTGAGGTGTCTGAATGGATGTGCAGCAAGGGACTTTTTTCCCTCACAACAAGAGACCTTGCCGTACAGCTCGATCTGATTGGCCGAGTTCGGGGATTGGATTCTGCCGAGATGTATTTCGGTAGTGTTTCTAACCGAGAGGAAGTTGGTAAACTCTATGGTGCTCTTTTAAATTGTTATGTCAGGGAAAACCTTATAGATAAGTCCCTTGCCCATATGCAGAAGATGAAGGAAATGGGTTTTGCTTCCTCTTCCCTCTGCTACAATGATATAATGTGTCTGTATTTGAACACTGGCCAGGCTGATAAGGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAATTCTTATGGAGCTAAGTCTGATGTAATCAGTATGGAGAAGGTTTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGACTACTTATTCAATGGTTGCCAATTTTTTCATAAAAGCTGGTATGCATGAGAAAGCAATGAATTATCTTCGGAAATGTGAGGACAAGGTCGATCGAGACACACTCGGCTTCAATCATCTCATTTCACACTACACCAATCTGGGATATAAAGATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGTGTAAGAAGCAAGTCAATAGAGATTATATAACCATGTTGAGTTCTTTAGTAAAGCTGGAGTTGCTCGAGGAAGCTGAGAATCTGCTCATGGAATGGGAGTCATCTTGCCAATGTTATGATTTTCGAGTTCCAAATGTCGTTCTTATCGGGTATTCGCAAAAGGGGTTAATTGAGAGAGCTGAAAAGATGCTTCGAAACATCATCAGAGATGGGAGGATCCCATCACCAAATAGTTGGGGCATTATTGCAGCTGGGTACTTGGAAAAGCAGAACCTGGAGAAAGCTTTTCAGAGCATGAAAGAAGCTCTTGCTGTAAAAGAACAAAATAAAGGGTGGAGGCCCAAACATAGCGTTTTATCAAGCATACTGCGATGGCTATCTGAGAATGGAAGATATGGAGAGCTAAAAGAGTTTTTGAGCTCATTGAAGACTGTACCTTCCATGGACGGAAAACTAAATAATGCCTTGGATGAGCTTCTAGAAACCTTGAAAAACGATGATGAAATAACGATGATGGGCGAATTAGAGGTGAGGTGA

Protein sequence

MAAASAMFKILIRSSSGCTRTVRTETDAFCFVMSRLYSARRSCDRRNLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVDRDTLGFNHLISHYTNLGYKDEVMRLWALQKKCKKQVNRDYITMLSSLVKLELLEEAENLLMEWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLNNALDELLETLKNDDEITMMGELEVR
Homology
[Close]
BLAST of Lsi05G007130 vs. Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.6e-117
Identity = 214/464 (46.12%), Postives = 310/464 (66.81%), Query Frame = 1 

Query: 32  VMSRLYSARRSCDRRNLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTC 91
           + SR Y   R   +  L+++ISPLGDP+ SV P L  W++ G+K+   EL RIV DLR  
Sbjct: 12  IASRYYYTNR-VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRR 71

Query: 92  RRYGQALEVSEWMCSKGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYG 151
           +R+  ALEVS+WM   G+   +  + AV LDLIGRV G  +AE YF ++  + +  K YG
Sbjct: 72  KRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYG 131

Query: 152 ALLNCYVRENLIDKSLAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKEN 211
           ALLNCYVR+  ++KSL H +KMKEMGF +SSL YN+IMCLY N GQ +KVP VL EMKE 
Sbjct: 132 ALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEE 191

Query: 212 GVLPDNFSYRICINSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEK 271
            V PDN+SYRICIN++GA  D+  +   L++ME +  I+MDW TY++ A F+I  G  ++
Sbjct: 192 NVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDR 251

Query: 272 AMNYLRKCEDKVD-RDTLGFNHLISHYTNLGYKDEVMRLWALQKK-CKKQVNRDYITMLS 331
           A+  L+  E++++ +D  G+NHLI+ Y  LG K EV+RLW L+K  CK+++N+DY+T+L 
Sbjct: 252 AVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQ 311

Query: 332 SLVKLELLEEAENLLMEWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIP 391
           SLVK++ L EAE +L EW+SS  CYDFRVPN V+ GY  K + E+AE ML ++ R G+  
Sbjct: 312 SLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKAT 371

Query: 392 SPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGE 451
           +P SW ++A  Y EK  LE AF+ MK AL V+  ++ WRP  ++++S+L W+ + G   E
Sbjct: 372 TPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKE 431

Query: 452 LKEFLSSLKTVPSMDGKLNNAL------------DELLETLKND 482
           ++ F++SL+    ++ ++ +AL            D LL+ +K+D
Sbjct: 432 VESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDD 474

[Close]
BLAST of Lsi05G007130 vs. Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.1e-77
Identity = 148/409 (36.19%), Postives = 242/409 (59.17%), Query Frame = 1 

Query: 51  RISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLF 110
           R++  GDP  S++ VLD W+++G  +K  EL  I++ LR   R+  AL++S+WM    + 
Sbjct: 43  RVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVH 102

Query: 111 SLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHM 170
            ++  D+A++LDLI +V GL  AE +F ++        LYGALLNCY  + ++ K+    
Sbjct: 103 EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVF 162

Query: 171 QKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAK 230
           Q+MKE+GF    L YN ++ LY+ TG+   V  +L EM++  V PD F+    +++Y   
Sbjct: 163 QEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVV 222

Query: 231 SDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVD--RDTL 290
           SDV  MEK L   E+   + +DW TY+  AN +IKAG+ EKA+  LRK E  V+  +   
Sbjct: 223 SDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 282

Query: 291 GFNHLISHYTNLGYKDEVMRLWALQKKCKKQVNRDYITMLSSLVKLELLEEAENLLMEWE 350
            +  L+S Y   G K+EV RLW+L K+     N  YI+++S+L+K++ +EE E ++ EWE
Sbjct: 283 AYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWE 342

Query: 351 SSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLE 410
           +    +D R+P++++ GY +KG++E+AE+++  +++  R+   ++W  +A GY     +E
Sbjct: 343 AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKME 402

Query: 411 KAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSL 458
           KA +  K A+ V +   GWRP   VL S + +L        L++ L  L
Sbjct: 403 KAVEKWKRAIEVSK--PGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449

[Close]
BLAST of Lsi05G007130 vs. Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 266.2 bits (679), Expect = 7.3e-70
Identity = 166/494 (33.60%), Postives = 276/494 (55.87%), Query Frame = 1 

Query: 3   AASAMFKILIRSSSGCTRT--VRTETDAFCFVMSRLYS------ARRSCDRRN-LFARIS 62
           A+SA +  L+R  S       +  +T A    +S++Y        RR   + N ++ +IS
Sbjct: 15  ASSASYSRLLRCRSPVVSVAALSKKTAAIVCSISQVYGYGTVDYERRPIVQWNAIYKKIS 74

Query: 63  PLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKG-LFSL 122
            +  PEL    VL+QW + GRK+  +EL R+V++LR  +R  QALEV +WM ++G  F L
Sbjct: 75  LMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRL 134

Query: 123 TTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQK 182
           +  D A+QLDLIG+VRG+  AE +F  +    +  ++YG+LLN YVR    +K+ A +  
Sbjct: 135 SASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNT 194

Query: 183 MKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSD 242
           M++ G+A   L +N +M LY+N  + DKV  ++ EMK+  +  D +SY I ++S G+   
Sbjct: 195 MRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGS 254

Query: 243 VISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKV-DRDTLGFN 302
           V  ME V ++M+S   I  +WTT+S +A  +IK G  EKA + LRK E ++  R+ + ++
Sbjct: 255 VEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYH 314

Query: 303 HLISHYTNLGYKDEVMRLWALQKKCKKQV-NRDYITMLSSLVKLELLEEAENLLMEWESS 362
           +L+S Y +LG K E+ R+W + K     + N  Y  ++SSLV++  +E AE +  EW   
Sbjct: 315 YLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPV 374

Query: 363 CQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKA 422
              YD R+PN+++  Y +   +E AE +  +++  G  PS ++W I+A G+  K+ + +A
Sbjct: 375 KSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEA 434

Query: 423 FQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLNNA 482
              ++ A +  E +  WRPK  +LS   +   E       +  L  L+    ++ K   A
Sbjct: 435 LTCLRNAFSA-EGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLA 494

[Close]
BLAST of Lsi05G007130 vs. Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.0e-64
Identity = 131/414 (31.64%), Postives = 232/414 (56.04%), Query Frame = 1 

Query: 48  LFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSK 107
           L+ R+   G  E+ V   L+Q+++  + +  +E+   ++ LR    Y  AL++SE M  +
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84

Query: 108 GLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSL 167
           G+ + T  D A+ LDL+ + R + + E YF  +    +    YG+LLNCY +E L +K+ 
Sbjct: 85  GM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAE 144

Query: 168 AHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSY 227
             + KMKE+    SS+ YN +M LY  TG+ +KVP ++ E+K   V+PD+++Y + + + 
Sbjct: 145 GLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRAL 204

Query: 228 GAKSDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDK-VDRD 287
            A +D+  +E+V++EM     ++ DWTTYS +A+ ++ AG+ +KA   L++ E K   RD
Sbjct: 205 AATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRD 264

Query: 288 TLGFNHLISHYTNLGYKDEVMRLW-ALQKKCKKQVNRDYITMLSSLVKLELLEEAENLLM 347
              +  LI+ Y  LG   EV R+W +L+    K  N  Y+ M+  LVKL  L  AE L  
Sbjct: 265 FTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFK 324

Query: 348 EWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQ 407
           EW+++C  YD R+ NV++  Y+Q+GLI++A ++     R G   +  +W I    Y++  
Sbjct: 325 EWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSG 384

Query: 408 NLEKAFQSMKEALAVKEQNKG-WRPKHSVLSSILRWLSENGRYGELKEFLSSLK 459
           ++ +A + M +A+++ + + G W P    + +++ +  +       +  L  LK
Sbjct: 385 DMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILK 437

[Close]
BLAST of Lsi05G007130 vs. Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-61
Identity = 148/448 (33.04%), Postives = 242/448 (54.02%), Query Frame = 1 

Query: 45  RRNLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWM 104
           R  L  R+  L   + S V  + +W EEG  ++ +EL RIVR+LR  +RY  ALE+ EWM
Sbjct: 60  RDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWM 119

Query: 105 CSKGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLID 164
             +    L   D AV LDLI ++RGL+SAE +F  + ++        +LL+ YV+  L D
Sbjct: 120 VVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSD 179

Query: 165 KSLAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICI 224
           K+ A  +KM E GF  S L YN ++ +Y++ GQ +KVP ++ E+K     PD  +Y + +
Sbjct: 180 KAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWL 239

Query: 225 NSYGAKSDVISMEKV-LKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKV 284
            ++ + +DV   EKV LK  E +  ++ DW TYS++ N + K    EKA   L++ E  V
Sbjct: 240 TAFASGNDVEGAEKVYLKAKEEK--LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLV 299

Query: 285 D-RDTLGFNHLISHYTNLGYKDEVMRLWALQKKCKKQVN-RDYITMLSSLVKLELLEEAE 344
             ++ + +  LIS + NLG KD V   W   K   K++N  +Y++M+S++VKL   E+A+
Sbjct: 300 SKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAK 359

Query: 345 NLLMEWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGY 404
            L  EWES     D R+PN++L  Y  +  +   EK    I+  G  PS ++W I+   Y
Sbjct: 360 GLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAY 419

Query: 405 LEKQNLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVP 464
           L+++++EK      +A+   +  K W     ++    + L E G     ++ ++ L+   
Sbjct: 420 LKRKDMEKVLDCFGKAI---DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAG 479

Query: 465 SMDGKLNNALDELLETLKNDDEITMMGE 490
            ++ +L N+   LL T     E+ ++ E
Sbjct: 480 YVNTQLYNS---LLRTYAKAGEMALIVE 498

[Close]
BLAST of Lsi05G007130 vs. TrEMBL
Match: A0A0A0L7Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104890 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 4.0e-248
Identity = 431/493 (87.42%), Postives = 457/493 (92.70%), Query Frame = 1 

Query: 1   MAAASAMFKILIRSSSGCTRTVRTETDAFCFVMSRLYSARRSCDRRNLFARISPLGDPEL 60
           MAAASAMFKIL RSSSGCTRT+R ETDAFCFV  RLYS RRSCDRRNL+ARISPLGDPE 
Sbjct: 1   MAAASAMFKILSRSSSGCTRTLRPETDAFCFVALRLYSTRRSCDRRNLYARISPLGDPEC 60

Query: 61  SVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLFSLTTRDLAVQ 120
           +VVPVL+QWIEEGR IKDFELRRIVRDLRTCRRY QALEVSEWMCSKGLFSLTTRD A+Q
Sbjct: 61  TVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGLFSLTTRDFAIQ 120

Query: 121 LDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQKMKEMGFAS 180
           LDLIG+VRGLDSAE YFGSVSN++E+GKLYGALLNCYVRE LIDKSLAHMQKMKEMG AS
Sbjct: 121 LDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLAS 180

Query: 181 SSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSDVISMEKVL 240
           S LCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICI+SYGA+SDVISME VL
Sbjct: 181 SPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVL 240

Query: 241 KEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVDRDTLGFNHLISHYTNL 300
           KEME QTHISMDWTTYSMVA FFIKAGMH+KAMNYLRKCEDKVD D LGFNHLISHYTNL
Sbjct: 241 KEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKVDEDALGFNHLISHYTNL 300

Query: 301 GYKDEVMRLWALQKKCKKQVNRDYITMLSSLVKLELLEEAENLLMEWESSCQCYDFRVPN 360
           G+K+EVMRLWAL KK KKQ+NRDYITML SLVKLELLEEAENL+MEWESSCQCYDFRVPN
Sbjct: 301 GHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENLVMEWESSCQCYDFRVPN 360

Query: 361 VVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 420
           VVLIGYSQKGLIE+AEKMLRNII +G IPSPNSWGIIA+GYLEKQNLEKAF+ MKEALAV
Sbjct: 361 VVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALAV 420

Query: 421 KEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLNNALDELLETLKN 480
           K QNK WRPK +VLSSILRWLSEN RY E+KEF+SSLKTVPSMD KLNNALDELLE + N
Sbjct: 421 KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNNALDELLEIMAN 480

Query: 481 DDEITMMGELEVR 494
           DD I+   ELEV+
Sbjct: 481 DDGIS-KDELEVK 492

[Close]
BLAST of Lsi05G007130 vs. TrEMBL
Match: F6H257_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02920 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 4.8e-161
Identity = 278/447 (62.19%), Postives = 358/447 (80.09%), Query Frame = 1 

Query: 47  NLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCS 106
           NL++RISPLG P LS+VPVLDQW+EEG+K++D EL RI+RDLR+ +RY QALEVSEWM S
Sbjct: 38  NLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSS 97

Query: 107 KGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKS 166
           K L   +    AVQLDLIG+VRGL+SAE YF ++S  E++ K+YGALLNCYVRE +IDKS
Sbjct: 98  KELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKS 157

Query: 167 LAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINS 226
           L+H+QKMKE+GFAS+ L YN +MCLY+NT Q +K+P+VLSEM+ENG+ PDNFSYR+CINS
Sbjct: 158 LSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINS 217

Query: 227 YGAKSDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVDRD 286
           YGA+SD+ SMEK+L+EMES++HI +DW TYSMVANF+IKAG++EKA+ +L+K E K+ +D
Sbjct: 218 YGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKD 277

Query: 287 TLGFNHLISHYTNLGYKDEVMRLWALQKKC-KKQVNRDYITMLSSLVKLELLEEAENLLM 346
            LG+NHLIS Y +LG K E+MRLW  +K   KK +NRDYITML SLVKL  LE+ E LL 
Sbjct: 278 PLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLK 337

Query: 347 EWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQ 406
           EWESS  CYDFRVPN +LIG+ QKGLIE+AE MLR+I+ +G+ P+PNSW I+AAGY+EKQ
Sbjct: 338 EWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQ 397

Query: 407 NLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDG 466
           N+EKAF+ MKEA+AV  +NKGWRPK  V+SSIL WL +N    E++ F+S+LK V  MD 
Sbjct: 398 NMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDR 457

Query: 467 KLNNA-----------LDELLETLKND 482
           ++ +A           +D +L+++K D
Sbjct: 458 EMYHAQIRASIRAGKEVDGILDSMKAD 484

[Close]
BLAST of Lsi05G007130 vs. TrEMBL
Match: B9SNN7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1010390 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 1.1e-160
Identity = 278/450 (61.78%), Postives = 355/450 (78.89%), Query Frame = 1 

Query: 23  RTETDAFCFVMSRLYSARRSCDRRNLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELR 82
           RT++     +++R Y  +       LFARISPLG+P++S+VPVLD W++EG+KI+ FEL+
Sbjct: 12  RTQSLTANAILTRRYYNKARTASNTLFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQ 71

Query: 83  RIVRDLRTCRRYGQALEVSEWMCSKGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSN 142
           +I+RDLR  RRY QAL+VSEWM  KG    +  D AVQLDLIGRVRGL+SAE YF ++ N
Sbjct: 72  KIIRDLRCHRRYTQALQVSEWMNGKGQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVN 131

Query: 143 REEVGKLYGALLNCYVRENLIDKSLAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVP 202
           ++   K YGALLNCYVRE L+DKSL HMQKMKE+GFASS L YND+MCLY  TGQ +KV 
Sbjct: 132 QDRNDKTYGALLNCYVREGLVDKSLYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVT 191

Query: 203 NVLSEMKENGVLPDNFSYRICINSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVANF 262
           +VLSEMKENG+ PD FSYRIC++S  A+SD+  +E++L+EME+Q+HIS+DW TYS VA+ 
Sbjct: 192 DVLSEMKENGITPDLFSYRICMSSCAARSDLKGVEEILEEMENQSHISIDWVTYSTVASI 251

Query: 263 FIKAGMHEKAMNYLRKCEDKVDRDTLGFNHLISHYTNLGYKDEVMRLWALQK-KCKKQVN 322
           ++KA + EKA+ YL+KCE KV+RD LG+NHLIS   +LG KDEVMRLW L K KCKKQVN
Sbjct: 252 YVKASLKEKALIYLKKCEQKVNRDALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVN 311

Query: 323 RDYITMLSSLVKLELLEEAENLLMEWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRN 382
           RDYITML +LVKLE LEEA+ LL EWESSCQCYDFRVPNV+LIGY Q+GLIE+AE ML++
Sbjct: 312 RDYITMLGALVKLEELEEADKLLQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKD 371

Query: 383 IIRDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWL 442
           I++  + P+PNSW IIAAGY+ KQN+EKAF  MKEAL V+ +NKGWRPK +++SSIL WL
Sbjct: 372 IVKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKGWRPKANLISSILSWL 431

Query: 443 SENGRYGELKEFLSSLKTVPSMDGKLNNAL 472
            ENG   +++ F++ L+T    D ++ + L
Sbjct: 432 GENGDVEDVEAFVNLLETKVPKDREIYHTL 461

[Close]
BLAST of Lsi05G007130 vs. TrEMBL
Match: V4TX32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007647mg PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 2.4e-160
Identity = 289/493 (58.62%), Postives = 374/493 (75.86%), Query Frame = 1 

Query: 4   ASAMFKILIRSSSGCTRTVRTETDAFCFVMSRLYSARRSCDRRNLFARISPLGDPELSVV 63
           AS +F  +  +    T+T          + +R Y A +   R NL++RISPLGDP++S+ 
Sbjct: 2   ASKLFSTIFNNKRNFTKTNLE-------IFTRAYRAAKPVARNNLYSRISPLGDPDVSLT 61

Query: 64  PVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLFSLTTRDLAVQLDL 123
           PVLDQW+ EG+KI + EL+RI+R LR+ +R+  AL+VSEWM  +GL + + RD AVQLDL
Sbjct: 62  PVLDQWVLEGQKISELELQRIIRQLRSRKRFKHALQVSEWMSGQGL-AFSVRDHAVQLDL 121

Query: 124 IGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQKMKEMGFASSSL 183
           IG+VRGL+SAE YF S+++ ++V KLYGALLNCYVRE L+D+SL+ MQKMKEMG   S+L
Sbjct: 122 IGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 181

Query: 184 CYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSDVISMEKVLKEM 243
            YN IMCLY NTGQ +K+P+VL +MKENGV PDNFSYRICINSYGA+S++ SME VL+EM
Sbjct: 182 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVSPDNFSYRICINSYGARSELSSMENVLQEM 241

Query: 244 ESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKV--DRDTLGFNHLISHYTNLG 303
           ESQ+HISMDW TYS VAN++I AG+ EKA+ YL+KCED V   +D LG+NHLISHY +L 
Sbjct: 242 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLR 301

Query: 304 YKDEVMRLWALQK-KCKKQVNRDYITMLSSLVKLELLEEAENLLMEWESSCQCYDFRVPN 363
            KDE+M+ W LQK KCKKQ+NRDYIT+L SLVK+  LEEAE +L EWESSC CYDFRVPN
Sbjct: 302 NKDEMMKFWGLQKIKCKKQLNRDYITILGSLVKIGELEEAEKMLEEWESSCYCYDFRVPN 361

Query: 364 VVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 423
           ++L+GYSQKG+IE+A+ +L+ I++ G+ P+PNSW IIAAGY +K N+EKAF+ MKEALAV
Sbjct: 362 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 421

Query: 424 KEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLNNALDE------- 483
            E+NK WRPK S++SSIL WL +N    E++ F+SSLK +      + +AL E       
Sbjct: 422 HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLK-IKVQKRNMYHALTEAHIRSGQ 481

[Close]
BLAST of Lsi05G007130 vs. TrEMBL
Match: A0A067G664_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011236mg PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 4.1e-160
Identity = 286/492 (58.13%), Postives = 371/492 (75.41%), Query Frame = 1 

Query: 4   ASAMFKILIRSSSGCTRTVRTETDAFCFVMSRLYSARRSCDRRNLFARISPLGDPELSVV 63
           AS +F  +  +    T+T          + +R Y A +   R NL++RISPLGDP++S+ 
Sbjct: 2   ASKLFSTIFNNKRNFTKTNLE-------IFTRAYRAVKPVARNNLYSRISPLGDPDVSLT 61

Query: 64  PVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLFSLTTRDLAVQLDL 123
           PVLDQW+ EG+KI + EL+R++R LR+ +R+  AL+VSEWM  +GL + +  D AVQLDL
Sbjct: 62  PVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDL 121

Query: 124 IGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQKMKEMGFASSSL 183
           IG+VRGL+SAE YF S+++ ++V KLYGALLNCYVRE L+D+SL+ MQKMKEMG   S+L
Sbjct: 122 IGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 181

Query: 184 CYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSDVISMEKVLKEM 243
            YN IMCLY NTGQ +K+P+VL +MKENGV PDNFSYRICINSYGA+S++ SME VL+EM
Sbjct: 182 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 241

Query: 244 ESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKV--DRDTLGFNHLISHYTNLG 303
           ESQ+HISMDW TYS VAN++I AG+ EKA+ YL+KCED V   +D LG+NHLISHY +LG
Sbjct: 242 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYASLG 301

Query: 304 YKDEVMRLWALQK-KCKKQVNRDYITMLSSLVKLELLEEAENLLMEWESSCQCYDFRVPN 363
            KDE+M+ W LQK KCKKQ+NRDYITML SLVK+  LEEAE +L EWE SC CYDFRVPN
Sbjct: 302 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWELSCYCYDFRVPN 361

Query: 364 VVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 423
           ++L+GYSQKG+IE+A+ +L+ I++ G+ P+PNSW IIAAGY +K N+EKAF+ MKEALAV
Sbjct: 362 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 421

Query: 424 KEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLK----------TVPSMDGKLNNA 483
            E+NK WRPK S++SSIL WL +N    E++ F+SSLK           +     +    
Sbjct: 422 HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQE 481

[Close]
BLAST of Lsi05G007130 vs. TAIR10
Match: AT4G21705.1 (AT4G21705.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 424.5 bits (1090), Expect = 9.1e-119
Identity = 214/464 (46.12%), Postives = 310/464 (66.81%), Query Frame = 1 

Query: 32  VMSRLYSARRSCDRRNLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTC 91
           + SR Y   R   +  L+++ISPLGDP+ SV P L  W++ G+K+   EL RIV DLR  
Sbjct: 12  IASRYYYTNR-VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRR 71

Query: 92  RRYGQALEVSEWMCSKGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYG 151
           +R+  ALEVS+WM   G+   +  + AV LDLIGRV G  +AE YF ++  + +  K YG
Sbjct: 72  KRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYG 131

Query: 152 ALLNCYVRENLIDKSLAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKEN 211
           ALLNCYVR+  ++KSL H +KMKEMGF +SSL YN+IMCLY N GQ +KVP VL EMKE 
Sbjct: 132 ALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEE 191

Query: 212 GVLPDNFSYRICINSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEK 271
            V PDN+SYRICIN++GA  D+  +   L++ME +  I+MDW TY++ A F+I  G  ++
Sbjct: 192 NVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDR 251

Query: 272 AMNYLRKCEDKVD-RDTLGFNHLISHYTNLGYKDEVMRLWALQKK-CKKQVNRDYITMLS 331
           A+  L+  E++++ +D  G+NHLI+ Y  LG K EV+RLW L+K  CK+++N+DY+T+L 
Sbjct: 252 AVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQ 311

Query: 332 SLVKLELLEEAENLLMEWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIP 391
           SLVK++ L EAE +L EW+SS  CYDFRVPN V+ GY  K + E+AE ML ++ R G+  
Sbjct: 312 SLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKAT 371

Query: 392 SPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGE 451
           +P SW ++A  Y EK  LE AF+ MK AL V+  ++ WRP  ++++S+L W+ + G   E
Sbjct: 372 TPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKE 431

Query: 452 LKEFLSSLKTVPSMDGKLNNAL------------DELLETLKND 482
           ++ F++SL+    ++ ++ +AL            D LL+ +K+D
Sbjct: 432 VESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDD 474

[Close]
BLAST of Lsi05G007130 vs. TAIR10
Match: AT2G20710.1 (AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-78
Identity = 148/409 (36.19%), Postives = 242/409 (59.17%), Query Frame = 1 

Query: 51  RISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLF 110
           R++  GDP  S++ VLD W+++G  +K  EL  I++ LR   R+  AL++S+WM    + 
Sbjct: 43  RVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVH 102

Query: 111 SLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHM 170
            ++  D+A++LDLI +V GL  AE +F ++        LYGALLNCY  + ++ K+    
Sbjct: 103 EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVF 162

Query: 171 QKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAK 230
           Q+MKE+GF    L YN ++ LY+ TG+   V  +L EM++  V PD F+    +++Y   
Sbjct: 163 QEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVV 222

Query: 231 SDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVD--RDTL 290
           SDV  MEK L   E+   + +DW TY+  AN +IKAG+ EKA+  LRK E  V+  +   
Sbjct: 223 SDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 282

Query: 291 GFNHLISHYTNLGYKDEVMRLWALQKKCKKQVNRDYITMLSSLVKLELLEEAENLLMEWE 350
            +  L+S Y   G K+EV RLW+L K+     N  YI+++S+L+K++ +EE E ++ EWE
Sbjct: 283 AYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWE 342

Query: 351 SSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLE 410
           +    +D R+P++++ GY +KG++E+AE+++  +++  R+   ++W  +A GY     +E
Sbjct: 343 AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKME 402

Query: 411 KAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSL 458
           KA +  K A+ V +   GWRP   VL S + +L        L++ L  L
Sbjct: 403 KAVEKWKRAIEVSK--PGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449

[Close]
BLAST of Lsi05G007130 vs. TAIR10
Match: AT1G02150.1 (AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 266.2 bits (679), Expect = 4.1e-71
Identity = 166/494 (33.60%), Postives = 276/494 (55.87%), Query Frame = 1 

Query: 3   AASAMFKILIRSSSGCTRT--VRTETDAFCFVMSRLYS------ARRSCDRRN-LFARIS 62
           A+SA +  L+R  S       +  +T A    +S++Y        RR   + N ++ +IS
Sbjct: 15  ASSASYSRLLRCRSPVVSVAALSKKTAAIVCSISQVYGYGTVDYERRPIVQWNAIYKKIS 74

Query: 63  PLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKG-LFSL 122
            +  PEL    VL+QW + GRK+  +EL R+V++LR  +R  QALEV +WM ++G  F L
Sbjct: 75  LMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRL 134

Query: 123 TTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQK 182
           +  D A+QLDLIG+VRG+  AE +F  +    +  ++YG+LLN YVR    +K+ A +  
Sbjct: 135 SASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNT 194

Query: 183 MKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSD 242
           M++ G+A   L +N +M LY+N  + DKV  ++ EMK+  +  D +SY I ++S G+   
Sbjct: 195 MRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGS 254

Query: 243 VISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKV-DRDTLGFN 302
           V  ME V ++M+S   I  +WTT+S +A  +IK G  EKA + LRK E ++  R+ + ++
Sbjct: 255 VEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYH 314

Query: 303 HLISHYTNLGYKDEVMRLWALQKKCKKQV-NRDYITMLSSLVKLELLEEAENLLMEWESS 362
           +L+S Y +LG K E+ R+W + K     + N  Y  ++SSLV++  +E AE +  EW   
Sbjct: 315 YLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPV 374

Query: 363 CQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKA 422
              YD R+PN+++  Y +   +E AE +  +++  G  PS ++W I+A G+  K+ + +A
Sbjct: 375 KSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEA 434

Query: 423 FQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLNNA 482
              ++ A +  E +  WRPK  +LS   +   E       +  L  L+    ++ K   A
Sbjct: 435 LTCLRNAFSA-EGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLA 494

[Close]
BLAST of Lsi05G007130 vs. TAIR10
Match: AT1G60770.1 (AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 246.5 bits (628), Expect = 3.4e-65
Identity = 131/414 (31.64%), Postives = 232/414 (56.04%), Query Frame = 1 

Query: 48  LFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSK 107
           L+ R+   G  E+ V   L+Q+++  + +  +E+   ++ LR    Y  AL++SE M  +
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84

Query: 108 GLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSL 167
           G+ + T  D A+ LDL+ + R + + E YF  +    +    YG+LLNCY +E L +K+ 
Sbjct: 85  GM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAE 144

Query: 168 AHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSY 227
             + KMKE+    SS+ YN +M LY  TG+ +KVP ++ E+K   V+PD+++Y + + + 
Sbjct: 145 GLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRAL 204

Query: 228 GAKSDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDK-VDRD 287
            A +D+  +E+V++EM     ++ DWTTYS +A+ ++ AG+ +KA   L++ E K   RD
Sbjct: 205 AATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRD 264

Query: 288 TLGFNHLISHYTNLGYKDEVMRLW-ALQKKCKKQVNRDYITMLSSLVKLELLEEAENLLM 347
              +  LI+ Y  LG   EV R+W +L+    K  N  Y+ M+  LVKL  L  AE L  
Sbjct: 265 FTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFK 324

Query: 348 EWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQ 407
           EW+++C  YD R+ NV++  Y+Q+GLI++A ++     R G   +  +W I    Y++  
Sbjct: 325 EWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSG 384

Query: 408 NLEKAFQSMKEALAVKEQNKG-WRPKHSVLSSILRWLSENGRYGELKEFLSSLK 459
           ++ +A + M +A+++ + + G W P    + +++ +  +       +  L  LK
Sbjct: 385 DMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILK 437

[Close]
BLAST of Lsi05G007130 vs. TAIR10
Match: AT4G02820.1 (AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-62
Identity = 148/448 (33.04%), Postives = 242/448 (54.02%), Query Frame = 1 

Query: 45  RRNLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWM 104
           R  L  R+  L   + S V  + +W EEG  ++ +EL RIVR+LR  +RY  ALE+ EWM
Sbjct: 60  RDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWM 119

Query: 105 CSKGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLID 164
             +    L   D AV LDLI ++RGL+SAE +F  + ++        +LL+ YV+  L D
Sbjct: 120 VVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSD 179

Query: 165 KSLAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICI 224
           K+ A  +KM E GF  S L YN ++ +Y++ GQ +KVP ++ E+K     PD  +Y + +
Sbjct: 180 KAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWL 239

Query: 225 NSYGAKSDVISMEKV-LKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKV 284
            ++ + +DV   EKV LK  E +  ++ DW TYS++ N + K    EKA   L++ E  V
Sbjct: 240 TAFASGNDVEGAEKVYLKAKEEK--LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLV 299

Query: 285 D-RDTLGFNHLISHYTNLGYKDEVMRLWALQKKCKKQVN-RDYITMLSSLVKLELLEEAE 344
             ++ + +  LIS + NLG KD V   W   K   K++N  +Y++M+S++VKL   E+A+
Sbjct: 300 SKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAK 359

Query: 345 NLLMEWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGY 404
            L  EWES     D R+PN++L  Y  +  +   EK    I+  G  PS ++W I+   Y
Sbjct: 360 GLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAY 419

Query: 405 LEKQNLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVP 464
           L+++++EK      +A+   +  K W     ++    + L E G     ++ ++ L+   
Sbjct: 420 LKRKDMEKVLDCFGKAI---DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAG 479

Query: 465 SMDGKLNNALDELLETLKNDDEITMMGE 490
            ++ +L N+   LL T     E+ ++ E
Sbjct: 480 YVNTQLYNS---LLRTYAKAGEMALIVE 498

[Close]
BLAST of Lsi05G007130 vs. NCBI nr
Match: gi|449431834|ref|XP_004133705.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 865.1 bits (2234), Expect = 5.7e-248
Identity = 431/493 (87.42%), Postives = 457/493 (92.70%), Query Frame = 1 

Query: 1   MAAASAMFKILIRSSSGCTRTVRTETDAFCFVMSRLYSARRSCDRRNLFARISPLGDPEL 60
           MAAASAMFKIL RSSSGCTRT+R ETDAFCFV  RLYS RRSCDRRNL+ARISPLGDPE 
Sbjct: 1   MAAASAMFKILSRSSSGCTRTLRPETDAFCFVALRLYSTRRSCDRRNLYARISPLGDPEC 60

Query: 61  SVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLFSLTTRDLAVQ 120
           +VVPVL+QWIEEGR IKDFELRRIVRDLRTCRRY QALEVSEWMCSKGLFSLTTRD A+Q
Sbjct: 61  TVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGLFSLTTRDFAIQ 120

Query: 121 LDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQKMKEMGFAS 180
           LDLIG+VRGLDSAE YFGSVSN++E+GKLYGALLNCYVRE LIDKSLAHMQKMKEMG AS
Sbjct: 121 LDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLAS 180

Query: 181 SSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSDVISMEKVL 240
           S LCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICI+SYGA+SDVISME VL
Sbjct: 181 SPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVL 240

Query: 241 KEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVDRDTLGFNHLISHYTNL 300
           KEME QTHISMDWTTYSMVA FFIKAGMH+KAMNYLRKCEDKVD D LGFNHLISHYTNL
Sbjct: 241 KEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKVDEDALGFNHLISHYTNL 300

Query: 301 GYKDEVMRLWALQKKCKKQVNRDYITMLSSLVKLELLEEAENLLMEWESSCQCYDFRVPN 360
           G+K+EVMRLWAL KK KKQ+NRDYITML SLVKLELLEEAENL+MEWESSCQCYDFRVPN
Sbjct: 301 GHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENLVMEWESSCQCYDFRVPN 360

Query: 361 VVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 420
           VVLIGYSQKGLIE+AEKMLRNII +G IPSPNSWGIIA+GYLEKQNLEKAF+ MKEALAV
Sbjct: 361 VVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALAV 420

Query: 421 KEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLNNALDELLETLKN 480
           K QNK WRPK +VLSSILRWLSEN RY E+KEF+SSLKTVPSMD KLNNALDELLE + N
Sbjct: 421 KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNNALDELLEIMAN 480

Query: 481 DDEITMMGELEVR 494
           DD I+   ELEV+
Sbjct: 481 DDGIS-KDELEVK 492

[Close]
BLAST of Lsi05G007130 vs. NCBI nr
Match: gi|659102689|ref|XP_008452263.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucumis melo])

HSP 1 Score: 838.2 bits (2164), Expect = 7.5e-240
Identity = 414/482 (85.89%), Postives = 445/482 (92.32%), Query Frame = 1 

Query: 1   MAAASAMFKILIRSSSGCTRTVRTETDAFCFVMSRLYSARRSCDRRNLFARISPLGDPEL 60
           MAAASAMFKIL RSSSGCTRT R ETDAFCFV  RLYS RRSC+RR L+A ISPLGDP+ 
Sbjct: 1   MAAASAMFKILSRSSSGCTRTPRPETDAFCFVALRLYSTRRSCNRRKLYAMISPLGDPDS 60

Query: 61  SVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLFSLTTRDLAVQ 120
           SVVPVL+QWI+EGRKIKDFELRRIVRDLRTCRRY QALEVSEWMCSKG FSLTTRD A+Q
Sbjct: 61  SVVPVLNQWIKEGRKIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGRFSLTTRDFAIQ 120

Query: 121 LDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQKMKEMGFAS 180
           LDLIG+VRGLDSAE YFGSVS ++E+GKLYG+LLNCYVRE LIDKSLAHMQKMKEMGFAS
Sbjct: 121 LDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGSLLNCYVREGLIDKSLAHMQKMKEMGFAS 180

Query: 181 SSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSDVISMEKVL 240
           S LCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICI+SYGA+SDVISME VL
Sbjct: 181 SPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVL 240

Query: 241 KEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVDRDTLGFNHLISHYTNL 300
           KEMESQTHISMDW TYSMVA FFIK  MH+KA NYLRKCED+VD+D LGFNHLISHYTNL
Sbjct: 241 KEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVDQDALGFNHLISHYTNL 300

Query: 301 GYKDEVMRLWALQKKCKKQVNRDYITMLSSLVKLELLEEAENLLMEWESSCQCYDFRVPN 360
           G+K+EVMRLWALQKK KKQ+NRDYITML SLVKL+LLEEAENL+MEWESSCQC DFRVPN
Sbjct: 301 GHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQCNDFRVPN 360

Query: 361 VVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 420
           VVLIGYSQ GLIE+AEKMLRNII +G IPSPNSWGIIA+GYLEKQNLEKAF+ MKEALAV
Sbjct: 361 VVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALAV 420

Query: 421 KEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDGKLNNALDELLETLKN 480
           K QNK WRPK +VLSSILRWLSEN RY E+KEF+SSLKTVPSMD KLN+ALDELLE ++N
Sbjct: 421 KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNSALDELLEIMEN 480

Query: 481 DD 483
           DD
Sbjct: 481 DD 482

[Close]
BLAST of Lsi05G007130 vs. NCBI nr
Match: gi|302143027|emb|CBI20322.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 575.9 bits (1483), Expect = 6.9e-161
Identity = 278/447 (62.19%), Postives = 358/447 (80.09%), Query Frame = 1 

Query: 47  NLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCS 106
           NL++RISPLG P LS+VPVLDQW+EEG+K++D EL RI+RDLR+ +RY QALEVSEWM S
Sbjct: 38  NLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSS 97

Query: 107 KGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKS 166
           K L   +    AVQLDLIG+VRGL+SAE YF ++S  E++ K+YGALLNCYVRE +IDKS
Sbjct: 98  KELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKS 157

Query: 167 LAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINS 226
           L+H+QKMKE+GFAS+ L YN +MCLY+NT Q +K+P+VLSEM+ENG+ PDNFSYR+CINS
Sbjct: 158 LSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINS 217

Query: 227 YGAKSDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVDRD 286
           YGA+SD+ SMEK+L+EMES++HI +DW TYSMVANF+IKAG++EKA+ +L+K E K+ +D
Sbjct: 218 YGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKD 277

Query: 287 TLGFNHLISHYTNLGYKDEVMRLWALQKKC-KKQVNRDYITMLSSLVKLELLEEAENLLM 346
            LG+NHLIS Y +LG K E+MRLW  +K   KK +NRDYITML SLVKL  LE+ E LL 
Sbjct: 278 PLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLK 337

Query: 347 EWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQ 406
           EWESS  CYDFRVPN +LIG+ QKGLIE+AE MLR+I+ +G+ P+PNSW I+AAGY+EKQ
Sbjct: 338 EWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQ 397

Query: 407 NLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDG 466
           N+EKAF+ MKEA+AV  +NKGWRPK  V+SSIL WL +N    E++ F+S+LK V  MD 
Sbjct: 398 NMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDR 457

Query: 467 KLNNA-----------LDELLETLKND 482
           ++ +A           +D +L+++K D
Sbjct: 458 EMYHAQIRASIRAGKEVDGILDSMKAD 484

[Close]
BLAST of Lsi05G007130 vs. NCBI nr
Match: gi|225461407|ref|XP_002282230.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Vitis vinifera])

HSP 1 Score: 575.9 bits (1483), Expect = 6.9e-161
Identity = 278/447 (62.19%), Postives = 358/447 (80.09%), Query Frame = 1 

Query: 47  NLFARISPLGDPELSVVPVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCS 106
           NL++RISPLG P LS+VPVLDQW+EEG+K++D EL RI+RDLR+ +RY QALEVSEWM S
Sbjct: 38  NLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSS 97

Query: 107 KGLFSLTTRDLAVQLDLIGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKS 166
           K L   +    AVQLDLIG+VRGL+SAE YF ++S  E++ K+YGALLNCYVRE +IDKS
Sbjct: 98  KELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKS 157

Query: 167 LAHMQKMKEMGFASSSLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINS 226
           L+H+QKMKE+GFAS+ L YN +MCLY+NT Q +K+P+VLSEM+ENG+ PDNFSYR+CINS
Sbjct: 158 LSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINS 217

Query: 227 YGAKSDVISMEKVLKEMESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKVDRD 286
           YGA+SD+ SMEK+L+EMES++HI +DW TYSMVANF+IKAG++EKA+ +L+K E K+ +D
Sbjct: 218 YGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKD 277

Query: 287 TLGFNHLISHYTNLGYKDEVMRLWALQKKC-KKQVNRDYITMLSSLVKLELLEEAENLLM 346
            LG+NHLIS Y +LG K E+MRLW  +K   KK +NRDYITML SLVKL  LE+ E LL 
Sbjct: 278 PLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLK 337

Query: 347 EWESSCQCYDFRVPNVVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQ 406
           EWESS  CYDFRVPN +LIG+ QKGLIE+AE MLR+I+ +G+ P+PNSW I+AAGY+EKQ
Sbjct: 338 EWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQ 397

Query: 407 NLEKAFQSMKEALAVKEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLKTVPSMDG 466
           N+EKAF+ MKEA+AV  +NKGWRPK  V+SSIL WL +N    E++ F+S+LK V  MD 
Sbjct: 398 NMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDR 457

Query: 467 KLNNA-----------LDELLETLKND 482
           ++ +A           +D +L+++K D
Sbjct: 458 EMYHAQIRASIRAGKEVDGILDSMKAD 484

[Close]
BLAST of Lsi05G007130 vs. NCBI nr
Match: gi|985428465|ref|XP_015388814.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Citrus sinensis])

HSP 1 Score: 575.5 bits (1482), Expect = 9.0e-161
Identity = 287/492 (58.33%), Postives = 373/492 (75.81%), Query Frame = 1 

Query: 4   ASAMFKILIRSSSGCTRTVRTETDAFCFVMSRLYSARRSCDRRNLFARISPLGDPELSVV 63
           AS +F  +  +    T+T          + +R Y A +   R NL++RISPLGDP++S+ 
Sbjct: 2   ASKLFSTIFNNKRNFTKTNLE-------IFTRAYRAVKPVARNNLYSRISPLGDPDVSLT 61

Query: 64  PVLDQWIEEGRKIKDFELRRIVRDLRTCRRYGQALEVSEWMCSKGLFSLTTRDLAVQLDL 123
           PVLDQW+ EG+KI + EL+R++R LR+ +R+  AL+VSEWM  +GL + +  D AVQLDL
Sbjct: 62  PVLDQWVLEGQKISELELQRVIRQLRSRKRFKHALQVSEWMSGQGL-AFSVHDHAVQLDL 121

Query: 124 IGRVRGLDSAEMYFGSVSNREEVGKLYGALLNCYVRENLIDKSLAHMQKMKEMGFASSSL 183
           IG+VRGL+SAE YF S+++ ++V KLYGALLNCYVRE L+D+SL+ MQKMKEMG   S+L
Sbjct: 122 IGKVRGLESAETYFNSLNDEDKVDKLYGALLNCYVREGLVDESLSLMQKMKEMGSFGSAL 181

Query: 184 CYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICINSYGAKSDVISMEKVLKEM 243
            YN IMCLY NTGQ +K+P+VL +MKENGV PDNFSYRICINSYGA+S++ SME VL+EM
Sbjct: 182 NYNGIMCLYTNTGQHEKIPDVLLDMKENGVPPDNFSYRICINSYGARSELSSMENVLQEM 241

Query: 244 ESQTHISMDWTTYSMVANFFIKAGMHEKAMNYLRKCEDKV--DRDTLGFNHLISHYTNLG 303
           ESQ+HISMDW TYS VAN++I AG+ EKA+ YL+KCED V   +D LG+NHLISHY++LG
Sbjct: 242 ESQSHISMDWGTYSTVANYYIIAGLKEKAIIYLKKCEDIVSKSKDALGYNHLISHYSSLG 301

Query: 304 YKDEVMRLWALQK-KCKKQVNRDYITMLSSLVKLELLEEAENLLMEWESSCQCYDFRVPN 363
            KDE+M+ W LQK KCKKQ+NRDYITML SLVK+  LEEAE +L EWESSC CYDFRVPN
Sbjct: 302 NKDEMMKFWGLQKIKCKKQLNRDYITMLGSLVKIGELEEAEKMLEEWESSCYCYDFRVPN 361

Query: 364 VVLIGYSQKGLIERAEKMLRNIIRDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 423
           ++L+GYSQKG+IE+A+ +L+ I++ G+ P+PNSW IIAAGY +K N+EKAF+ MKEALAV
Sbjct: 362 IILLGYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAV 421

Query: 424 KEQNKGWRPKHSVLSSILRWLSENGRYGELKEFLSSLK----------TVPSMDGKLNNA 483
            E+NK WRPK S++SSIL WL +N    E++ F+SSLK           +     +    
Sbjct: 422 HEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQKRNMYHALTEAHIRSGQE 481

The following BLAST results are available for this feature:
BLAST of Lsi05G007130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP334_ARATH1.6e-11746.12Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop... [more]
PP166_ARATH2.1e-7736.19Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
PPR3_ARATH7.3e-7033.60Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN... [more]
PPR86_ARATH6.0e-6431.64Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN... [more]
PP302_ARATH2.1e-6133.04Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
BLAST of Lsi05G007130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Y2_CUCSA4.0e-24887.42Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104890 PE=4 SV=1[more]
F6H257_VITVI4.8e-16162.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02920 PE=4 SV=... [more]
B9SNN7_RICCO1.1e-16061.78Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
V4TX32_9ROSI2.4e-16058.62Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007647mg PE=4 SV=1[more]
A0A067G664_CITSI4.1e-16058.13Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011236mg PE=4 SV=1[more]
BLAST of Lsi05G007130 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G21705.19.1e-11946.12 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G20710.11.2e-7836.19 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G02150.14.1e-7133.60 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G60770.13.4e-6531.64 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G02820.11.2e-6233.04 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Lsi05G007130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449431834|ref|XP_004133705.1|5.7e-24887.42PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-... [more]
gi|659102689|ref|XP_008452263.1|7.5e-24085.89PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-... [more]
gi|302143027|emb|CBI20322.3|6.9e-16162.19unnamed protein product [Vitis vinifera][more]
gi|225461407|ref|XP_002282230.1|6.9e-16162.19PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial ... [more]
gi|985428465|ref|XP_015388814.1|9.0e-16158.33PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G007130.1Lsi05G007130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 324..349
score: 0.22coord: 150..178
score: 0.0068coord: 360..386
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 183..227
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 184..216
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 216..250
score: 6.906coord: 355..389
score: 8.407coord: 286..320
score: 6.182coord: 181..215
score: 9.525coord: 146..180
score: 7.903coord: 390..424
score: 5.152coord: 252..282
score:
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 366..425
score: 1.2E-9coord: 141..334
score: 1.
NoneNo IPR availableunknownCoilCoilcoord: 404..424
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 47..492
score: 4.6E
NoneNo IPR availablePANTHERPTHR24015:SF671SUBFAMILY NOT NAMEDcoord: 47..492
score: 4.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G007130Csa3G104890Cucumber (Chinese Long) v2culsiB198
Lsi05G007130CSPI03G06130Wild cucumber (PI 183967)cpilsiB197
Lsi05G007130Cucsa.074720Cucumber (Gy14) v1cgylsiB074
Lsi05G007130CmaCh04G009070Cucurbita maxima (Rimu)cmalsiB691
Lsi05G007130CmoCh04G009740Cucurbita moschata (Rifu)cmolsiB684
Lsi05G007130Cla019499Watermelon (97103) v1lsiwmB354
Lsi05G007130Cla011782Watermelon (97103) v1lsiwmB358
Lsi05G007130MELO3C016518Melon (DHL92) v3.5.1lsimeB380
Lsi05G007130ClCG10G006880Watermelon (Charleston Gray)lsiwcgB318
Lsi05G007130MELO3C016518.2Melon (DHL92) v3.6.1lsimedB387
Lsi05G007130Cla97C03G057280Watermelon (97103) v2lsiwmbB328
Lsi05G007130Cla97C10G190750Watermelon (97103) v2lsiwmbB322
Lsi05G007130Cp4.1LG01g08640Cucurbita pepo (Zucchini)cpelsiB370
Lsi05G007130CsGy3G006230Cucumber (Gy14) v2cgyblsiB183
Lsi05G007130CsGy1G012060Cucumber (Gy14) v2cgyblsiB053
Lsi05G007130Carg00026Silver-seed gourdcarlsiB616
Lsi05G007130CsaV3_1G012210Cucumber (Chinese Long) v3cuclsiB065
Lsi05G007130CsaV3_3G006240Cucumber (Chinese Long) v3cuclsiB217
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi05G007130Lsi02G007450Bottle gourd (USVL1VR-Ls)lsilsiB107
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G007130Wax gourdlsiwgoB410
Lsi05G007130Wax gourdlsiwgoB413
Lsi05G007130Cucurbita maxima (Rimu)cmalsiB313
Lsi05G007130Cucurbita maxima (Rimu)cmalsiB315
Lsi05G007130Cucurbita maxima (Rimu)cmalsiB687
Lsi05G007130Cucurbita moschata (Rifu)cmolsiB302
Lsi05G007130Cucurbita moschata (Rifu)cmolsiB305
Lsi05G007130Cucurbita moschata (Rifu)cmolsiB680
Lsi05G007130Cucurbita pepo (Zucchini)cpelsiB176
Lsi05G007130Wild cucumber (PI 183967)cpilsiB215
Lsi05G007130Cucumber (Chinese Long) v2culsiB217
Lsi05G007130Silver-seed gourdcarlsiB432