Cla011782 (gene) Watermelon (97103) v1

NameCla011782
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- D7MEQ2_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr7 : 10206587 .. 10208507 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGGCTTCAGCGATTTTCAAAATCTTCAGGAGGTCATCTTCAGGCTGCACTAGAACAGCAAGAACAGAGACAGATGCATTTTATTTTGTGGTGTTGAGATTATACAGCGCAAGACGAAGCTGCGATCGAAGAAACCTCTTTGCGAGGATTAGTCCTCTTGGTGACCCTGAGCTTAGTGTAGTGCCGGTTCTTAATCAATGGATTGAGGAAGGCAGGAAGATCAAGGATTTTGAGCTCCGGAGAATCGTTCGCGACCTTCGTACTTCCCGGCGGTATGGGCAAGCCCTTGAGGTGAGCGCAATTGAAAAGCACGCCCTAATTTCCCGTGAAAAGAATGCTTGTATTGTATGTGATGTCTGTTGGATGAAGCAAAATTCTTTTGGTTTATTGTATGAATGAATGATGGCCAGAGAGTAACCTCAAATCCTTTTTCGTGTTCTATTCTCACAATGCTTGATTGATTGCTGAAGACACTATGAAGGAAGGCTACAAACTGGAAATATGCATTATGAACTTTGAAGTAATTACAACTAGTTAAGCTAATTGTCATTTTACACTCACCTTGATTATGCTTCTAGAGGGTAGCAAATTATATGTTATGTTATAACCATTGTGGAGTTAGCTTAGTACTAGGTTGATGCCCTAAGCTGTTTATATCCCATTTGATGTTTTATCAGTCCTGGATTTCATCTTTCAAATATCTATAGTATTATAAAATTATGGATGGTTGATTTTTGTTCTTTCTCTTGGTTTATTCAAATTGAAGGTGTCTGAATGGATGTGTAGCAAGGGACTTTTTTCCCTCACAACAAGAGACTTTGCCGTGCAGCTTGATTTGATTGGCCGAGTTCGTGGGTTGGATTCTGCAGAGAAGTATTTTGGCAGTGTTTCTAACCAAGAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTGTAGATAAGTCCCTTGCTCATATGCAGAAGATGAAGGAGATGGGTTTTGCTTCCTCTCCCCTCTGCTACAATGATATAATGTGTCTATATTTGAAAACTGGCCAGGCTGATAAGGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAGTTCTTATGGAGCTAAGTCTGATGTAATCAGTATGGAAAAGGTCTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGACTACTTATTCAATGGTTGCCAGTTTTTTCATCAAAGCCAGTATGCATGAGAAAGCAATTAGTTATCTTCGGAAATGTGAGGACAAGGTCGATCAAGACGCACTTGGCTTCAATCATCTCATTTCACACTACACCAGTTTGGGACACAAGGATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGTGTAAGAAGCAAGTGAACAGGGATTATATAACCATGTTGAGTTCTTTTGTAAAGCTGGAGTTGCTCGAGGAAGCTGAGAATCTTCTCGTGGAATGGGAGTCATCTTGCGAATGTTATGATTTTCGAGTTCCCAACATCGTTCTTATCGGGTATTCGCAAAAGGGGTTAATTGAGAGAGCTGAAAAGATGCTTCGAAACATCATCAAAGATGGGAGGATCCCATCACCAAATAGTTGGGGCATTATTGCAGCTGGGTACTTGGAAAAGCAGAACCTGGAGAAAGCTTTTCAGAGCATGAAAGAAGCTCTTGCTGTGAAAGAGCAAAATAAAGGGTGGAGGCCCAAACCTAGCGTTTTCTCAAGCATACTGCGATGGCTATCTGAAAATGGAAGATATGAAGAGCTGAAAGAGTTTTTGAGCTCATTGAAGACTGTACCTTCCATGGATGGAAAACTAAATAATGCCTTGGATGAGCTTCTGAAAACCTTGAATGATGATTGA

mRNA sequence

ATGGCGGCGGCTTCAGCGATTTTCAAAATCTTCAGGAGGTCATCTTCAGGCTGCACTAGAACAGCAAGAACAGAGACAGATGCATTTTATTTTGTGGTGTTGAGATTATACAGCGCAAGACGAAGCTGCGATCGAAGAAACCTCTTTGCGAGGATTAGTCCTCTTGGTGACCCTGAGCTTAGTGTAGTGCCGGTTCTTAATCAATGGATTGAGGAAGGCAGGAAGATCAAGGATTTTGAGCTCCGGAGAATCGTTCGCGACCTTCGTACTTCCCGGCGGTATGGGCAAGCCCTTGAGGTGTCTGAATGGATGTGTAGCAAGGGACTTTTTTCCCTCACAACAAGAGACTTTGCCGTGCAGCTTGATTTGATTGGCCGAGTTCGTGGGTTGGATTCTGCAGAGAAGTATTTTGGCAGTGTTTCTAACCAAGAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTGTAGATAAGTCCCTTGCTCATATGCAGAAGATGAAGGAGATGGGTTTTGCTTCCTCTCCCCTCTGCTACAATGATATAATGTGTCTATATTTGAAAACTGGCCAGGCTGATAAGGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAGTTCTTATGGAGCTAAGTCTGATGTAATCAGTATGGAAAAGGTCTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGACTACTTATTCAATGGTTGCCAGTTTTTTCATCAAAGCCAGTATGCATGAGAAAGCAATTAGTTATCTTCGGAAATGTGAGGACAAGGTCGATCAAGACGCACTTGGCTTCAATCATCTCATTTCACACTACACCAGTTTGGGACACAAGGATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGTGTAAGAAGCAAGTGAACAGGGATTATATAACCATGTTGAGTTCTTTTGTAAAGCTGGAGTTGCTCGAGGAAGCTGAGAATCTTCTCGTGGAATGGGAGTCATCTTGCGAATGTTATGATTTTCGAGTTCCCAACATCGTTCTTATCGGGTATTCGCAAAAGGGGTTAATTGAGAGAGCTGAAAAGATGCTTCGAAACATCATCAAAGATGGGAGGATCCCATCACCAAATAGTTGGGGCATTATTGCAGCTGGGTACTTGGAAAAGCAGAACCTGGAGAAAGCTTTTCAGAGCATGAAAGAAGCTCTTGCTGTGAAAGAGCAAAATAAAGGGTGGAGGCCCAAACCTAGCGTTTTCTCAAGCATACTGCGATGGCTATCTGAAAATGGAAGATATGAAGAGCTGAAAGAGTTTTTGAGCTCATTGAAGACTGTACCTTCCATGGATGGAAAACTAAATAATGCCTTGGATGAGCTTCTGAAAACCTTGAATGATGATTGA

Coding sequence (CDS)

ATGGCGGCGGCTTCAGCGATTTTCAAAATCTTCAGGAGGTCATCTTCAGGCTGCACTAGAACAGCAAGAACAGAGACAGATGCATTTTATTTTGTGGTGTTGAGATTATACAGCGCAAGACGAAGCTGCGATCGAAGAAACCTCTTTGCGAGGATTAGTCCTCTTGGTGACCCTGAGCTTAGTGTAGTGCCGGTTCTTAATCAATGGATTGAGGAAGGCAGGAAGATCAAGGATTTTGAGCTCCGGAGAATCGTTCGCGACCTTCGTACTTCCCGGCGGTATGGGCAAGCCCTTGAGGTGTCTGAATGGATGTGTAGCAAGGGACTTTTTTCCCTCACAACAAGAGACTTTGCCGTGCAGCTTGATTTGATTGGCCGAGTTCGTGGGTTGGATTCTGCAGAGAAGTATTTTGGCAGTGTTTCTAACCAAGAGGAAATTGGTAAACTCTATGGTGCTCTTCTAAATTGTTATGTCAGGGAAGGCCTTGTAGATAAGTCCCTTGCTCATATGCAGAAGATGAAGGAGATGGGTTTTGCTTCCTCTCCCCTCTGCTACAATGATATAATGTGTCTATATTTGAAAACTGGCCAGGCTGATAAGGTTCCAAATGTACTGTCTGAAATGAAGGAGAATGGTGTTCTTCCTGACAATTTTAGCTATAGAATTTGTATCAGTTCTTATGGAGCTAAGTCTGATGTAATCAGTATGGAAAAGGTCTTGAAAGAAATGGAGAGTCAAACTCACATATCCATGGATTGGACTACTTATTCAATGGTTGCCAGTTTTTTCATCAAAGCCAGTATGCATGAGAAAGCAATTAGTTATCTTCGGAAATGTGAGGACAAGGTCGATCAAGACGCACTTGGCTTCAATCATCTCATTTCACACTACACCAGTTTGGGACACAAGGATGAAGTAATGAGATTGTGGGCTCTTCAGAAGAAGTGTAAGAAGCAAGTGAACAGGGATTATATAACCATGTTGAGTTCTTTTGTAAAGCTGGAGTTGCTCGAGGAAGCTGAGAATCTTCTCGTGGAATGGGAGTCATCTTGCGAATGTTATGATTTTCGAGTTCCCAACATCGTTCTTATCGGGTATTCGCAAAAGGGGTTAATTGAGAGAGCTGAAAAGATGCTTCGAAACATCATCAAAGATGGGAGGATCCCATCACCAAATAGTTGGGGCATTATTGCAGCTGGGTACTTGGAAAAGCAGAACCTGGAGAAAGCTTTTCAGAGCATGAAAGAAGCTCTTGCTGTGAAAGAGCAAAATAAAGGGTGGAGGCCCAAACCTAGCGTTTTCTCAAGCATACTGCGATGGCTATCTGAAAATGGAAGATATGAAGAGCTGAAAGAGTTTTTGAGCTCATTGAAGACTGTACCTTCCATGGATGGAAAACTAAATAATGCCTTGGATGAGCTTCTGAAAACCTTGAATGATGATTGA

Protein sequence

MAAASAIFKIFRRSSSGCTRTARTETDAFYFVVLRLYSARRSCDRRNLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCSKGLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKVDQDALGFNHLISHYTSLGHKDEVMRLWALQKKCKKQVNRDYITMLSSFVKLELLEEAENLLVEWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLNNALDELLKTLNDD
BLAST of Cla011782 vs. Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.8e-113
Identity = 209/464 (45.04%), Postives = 303/464 (65.30%), Query Frame = 1

Query: 32  VVLRLYSARRSCDRRNLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTS 91
           +  R Y   R   +  L+++ISPLGDP+ SV P L  W++ G+K+   EL RIV DLR  
Sbjct: 12  IASRYYYTNR-VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRR 71

Query: 92  RRYGQALEVSEWMCSKGLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYG 151
           +R+  ALEVS+WM   G+   +  + AV LDLIGRV G  +AE+YF ++  Q +  K YG
Sbjct: 72  KRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYG 131

Query: 152 ALLNCYVREGLVDKSLAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKEN 211
           ALLNCYVR+  V+KSL H +KMKEMGF +S L YN+IMCLY   GQ +KVP VL EMKE 
Sbjct: 132 ALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEE 191

Query: 212 GVLPDNFSYRICISSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVASFFIKASMHEK 271
            V PDN+SYRICI+++GA  D+  +   L++ME +  I+MDW TY++ A F+I     ++
Sbjct: 192 NVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDR 251

Query: 272 AISYLRKCEDKVD-QDALGFNHLISHYTSLGHKDEVMRLWALQKK-CKKQVNRDYITMLS 331
           A+  L+  E++++ +D  G+NHLI+ Y  LG K EV+RLW L+K  CK+++N+DY+T+L 
Sbjct: 252 AVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQ 311

Query: 332 SFVKLELLEEAENLLVEWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRIP 391
           S VK++ L EAE +L EW+SS  CYDFRVPN V+ GY  K + E+AE ML ++ + G+  
Sbjct: 312 SLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKAT 371

Query: 392 SPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWLSENGRYEE 451
           +P SW ++A  Y EK  LE AF+ MK AL V+  ++ WRP  ++ +S+L W+ + G  +E
Sbjct: 372 TPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKE 431

Query: 452 LKEFLSSLKTVPSMDGKLNNAL------------DELLKTLNDD 482
           ++ F++SL+    ++ ++ +AL            D LL+ + DD
Sbjct: 432 VESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDD 474

BLAST of Cla011782 vs. Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.7e-74
Identity = 145/409 (35.45%), Postives = 239/409 (58.44%), Query Frame = 1

Query: 51  RISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCSKGLF 110
           R++  GDP  S++ VL+ W+++G  +K  EL  I++ LR   R+  AL++S+WM    + 
Sbjct: 43  RVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVH 102

Query: 111 SLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKSLAHM 170
            ++  D A++LDLI +V GL  AEK+F ++  +     LYGALLNCY  + ++ K+    
Sbjct: 103 EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVF 162

Query: 171 QKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGAK 230
           Q+MKE+GF    L YN ++ LY++TG+   V  +L EM++  V PD F+    + +Y   
Sbjct: 163 QEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVV 222

Query: 231 SDVISMEKVLKEMESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKVDQDAL-- 290
           SDV  MEK L   E+   + +DW TY+  A+ +IKA + EKA+  LRK E  V+      
Sbjct: 223 SDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 282

Query: 291 GFNHLISHYTSLGHKDEVMRLWALQKKCKKQVNRDYITMLSSFVKLELLEEAENLLVEWE 350
            +  L+S Y + G K+EV RLW+L K+     N  YI+++S+ +K++ +EE E ++ EWE
Sbjct: 283 AYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWE 342

Query: 351 SSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQNLE 410
           +    +D R+P++++ GY +KG++E+AE+++  +++  R+   ++W  +A GY     +E
Sbjct: 343 AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKME 402

Query: 411 KAFQSMKEALAVKEQNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSL 458
           KA +  K A+ V +   GWRP   V  S + +L      E L++ L  L
Sbjct: 403 KAVEKWKRAIEVSK--PGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449

BLAST of Cla011782 vs. Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-68
Identity = 151/438 (34.47%), Postives = 247/438 (56.39%), Query Frame = 1

Query: 37  YSARRSCDRRNLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQ 96
           Y  R       ++ +IS +  PEL    VLNQW + GRK+  +EL R+V++LR  +R  Q
Sbjct: 58  YERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQ 117

Query: 97  ALEVSEWMCSKG-LFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLN 156
           ALEV +WM ++G  F L+  D A+QLDLIG+VRG+  AE++F  +    +  ++YG+LLN
Sbjct: 118 ALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLN 177

Query: 157 CYVREGLVDKSLAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLP 216
            YVR    +K+ A +  M++ G+A  PL +N +M LY+   + DKV  ++ EMK+  +  
Sbjct: 178 AYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRL 237

Query: 217 DNFSYRICISSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVASFFIKASMHEKAISY 276
           D +SY I +SS G+   V  ME V ++M+S   I  +WTT+S +A+ +IK    EKA   
Sbjct: 238 DIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA 297

Query: 277 LRKCEDKV-DQDALGFNHLISHYTSLGHKDEVMRLWALQKKCKKQV-NRDYITMLSSFVK 336
           LRK E ++  ++ + +++L+S Y SLG+K E+ R+W + K     + N  Y  ++SS V+
Sbjct: 298 LRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVR 357

Query: 337 LELLEEAENLLVEWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNS 396
           +  +E AE +  EW      YD R+PN+++  Y +   +E AE +  ++++ G  PS ++
Sbjct: 358 MGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSST 417

Query: 397 WGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWLSENGRYEELKEF 456
           W I+A G+  K+ + +A   ++ A +  E +  WRPK  + S   +   E       +  
Sbjct: 418 WEILAVGHTRKRCISEALTCLRNAFSA-EGSSNWRPKVLMLSGFFKLCEEESDVTSKEAV 477

Query: 457 LSSLKTVPSMDGKLNNAL 472
           L  L+    ++ K   AL
Sbjct: 478 LELLRQSGDLEDKSYLAL 494

BLAST of Cla011782 vs. Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.4e-62
Identity = 129/414 (31.16%), Postives = 228/414 (55.07%), Query Frame = 1

Query: 48  LFARISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCSK 107
           L+ R+   G  E+ V   LNQ+++  + +  +E+   ++ LR    Y  AL++SE M  +
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84

Query: 108 GLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKSL 167
           G+ + T  D A+ LDL+ + R + + E YF  +    +    YG+LLNCY +E L +K+ 
Sbjct: 85  GM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAE 144

Query: 168 AHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISSY 227
             + KMKE+    S + YN +M LY KTG+ +KVP ++ E+K   V+PD+++Y + + + 
Sbjct: 145 GLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRAL 204

Query: 228 GAKSDVISMEKVLKEMESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDK-VDQD 287
            A +D+  +E+V++EM     ++ DWTTYS +AS ++ A + +KA   L++ E K   +D
Sbjct: 205 AATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRD 264

Query: 288 ALGFNHLISHYTSLGHKDEVMRLW-ALQKKCKKQVNRDYITMLSSFVKLELLEEAENLLV 347
              +  LI+ Y  LG   EV R+W +L+    K  N  Y+ M+   VKL  L  AE L  
Sbjct: 265 FTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFK 324

Query: 348 EWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQ 407
           EW+++C  YD R+ N+++  Y+Q+GLI++A ++     + G   +  +W I    Y++  
Sbjct: 325 EWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSG 384

Query: 408 NLEKAFQSMKEALAVKEQNKG-WRPKPSVFSSILRWLSENGRYEELKEFLSSLK 459
           ++ +A + M +A+++ + + G W P P    +++ +  +       +  L  LK
Sbjct: 385 DMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILK 437

BLAST of Cla011782 vs. Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.1e-60
Identity = 144/430 (33.49%), Postives = 235/430 (54.65%), Query Frame = 1

Query: 45  RRNLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWM 104
           R  L  R+  L   + S V  + +W EEG  ++ +EL RIVR+LR  +RY  ALE+ EWM
Sbjct: 60  RDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWM 119

Query: 105 CSKGLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVD 164
             +    L   D+AV LDLI ++RGL+SAEK+F  + +Q        +LL+ YV+  L D
Sbjct: 120 VVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSD 179

Query: 165 KSLAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICI 224
           K+ A  +KM E GF  S L YN ++ +Y+  GQ +KVP ++ E+K     PD  +Y + +
Sbjct: 180 KAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWL 239

Query: 225 SSYGAKSDVISMEKV-LKEMESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKV 284
           +++ + +DV   EKV LK  E +  ++ DW TYS++ + + K    EKA   L++ E  V
Sbjct: 240 TAFASGNDVEGAEKVYLKAKEEK--LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLV 299

Query: 285 D-QDALGFNHLISHYTSLGHKDEVMRLWALQKKCKKQVN-RDYITMLSSFVKLELLEEAE 344
             ++ + +  LIS + +LG KD V   W   K   K++N  +Y++M+S+ VKL   E+A+
Sbjct: 300 SKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAK 359

Query: 345 NLLVEWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGY 404
            L  EWES     D R+PN++L  Y  +  +   EK    I++ G  PS ++W I+   Y
Sbjct: 360 GLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAY 419

Query: 405 LEKQNLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSLKTVP 464
           L+++++EK      +A+   +  K W     +     + L E G  +  ++ ++ L+   
Sbjct: 420 LKRKDMEKVLDCFGKAI---DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAG 479

Query: 465 SMDGKLNNAL 472
            ++ +L N+L
Sbjct: 480 YVNTQLYNSL 483

BLAST of Cla011782 vs. TrEMBL
Match: A0A0A0L7Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104890 PE=4 SV=1)

HSP 1 Score: 854.0 bits (2205), Expect = 9.0e-245
Identity = 423/482 (87.76%), Postives = 451/482 (93.57%), Query Frame = 1

Query: 1   MAAASAIFKIFRRSSSGCTRTARTETDAFYFVVLRLYSARRSCDRRNLFARISPLGDPEL 60
           MAAASA+FKI  RSSSGCTRT R ETDAF FV LRLYS RRSCDRRNL+ARISPLGDPE 
Sbjct: 1   MAAASAMFKILSRSSSGCTRTLRPETDAFCFVALRLYSTRRSCDRRNLYARISPLGDPEC 60

Query: 61  SVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCSKGLFSLTTRDFAVQ 120
           +VVPVLNQWIEEGR IKDFELRRIVRDLRT RRY QALEVSEWMCSKGLFSLTTRDFA+Q
Sbjct: 61  TVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGLFSLTTRDFAIQ 120

Query: 121 LDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQKMKEMGFAS 180
           LDLIG+VRGLDSAEKYFGSVSNQ+EIGKLYGALLNCYVREGL+DKSLAHMQKMKEMG AS
Sbjct: 121 LDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLAS 180

Query: 181 SPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGAKSDVISMEKVL 240
           SPLCYNDIMCLYL TGQADKVPNVLSEMKENGVLPDNFSYRICISSYGA+SDVISME VL
Sbjct: 181 SPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVL 240

Query: 241 KEMESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKVDQDALGFNHLISHYTSL 300
           KEME QTHISMDWTTYSMVA FFIKA MH+KA++YLRKCEDKVD+DALGFNHLISHYT+L
Sbjct: 241 KEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKVDEDALGFNHLISHYTNL 300

Query: 301 GHKDEVMRLWALQKKCKKQVNRDYITMLSSFVKLELLEEAENLLVEWESSCECYDFRVPN 360
           GHK+EVMRLWAL KK KKQ+NRDYITML S VKLELLEEAENL++EWESSC+CYDFRVPN
Sbjct: 301 GHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENLVMEWESSCQCYDFRVPN 360

Query: 361 IVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 420
           +VLIGYSQKGLIE+AEKMLRNII +G IPSPNSWGIIA+GYLEKQNLEKAF+ MKEALAV
Sbjct: 361 VVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALAV 420

Query: 421 KEQNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLNNALDELLKTL-N 480
           K QNK WRPKP+V SSILRWLSEN RYEE+KEF+SSLKTVPSMD KLNNALDELL+ + N
Sbjct: 421 KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNNALDELLEIMAN 480

Query: 481 DD 482
           DD
Sbjct: 481 DD 482

BLAST of Cla011782 vs. TrEMBL
Match: B9SNN7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1010390 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 2.5e-162
Identity = 284/450 (63.11%), Postives = 358/450 (79.56%), Query Frame = 1

Query: 23  RTETDAFYFVVLRLYSARRSCDRRNLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELR 82
           RT++     ++ R Y  +       LFARISPLG+P++S+VPVL+ W++EG+KI+ FEL+
Sbjct: 12  RTQSLTANAILTRRYYNKARTASNTLFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQ 71

Query: 83  RIVRDLRTSRRYGQALEVSEWMCSKGLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSN 142
           +I+RDLR  RRY QAL+VSEWM  KG    +  D AVQLDLIGRVRGL+SAE YF ++ N
Sbjct: 72  KIIRDLRCHRRYTQALQVSEWMNGKGQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVN 131

Query: 143 QEEIGKLYGALLNCYVREGLVDKSLAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVP 202
           Q+   K YGALLNCYVREGLVDKSL HMQKMKE+GFASSPL YND+MCLY +TGQ +KV 
Sbjct: 132 QDRNDKTYGALLNCYVREGLVDKSLYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVT 191

Query: 203 NVLSEMKENGVLPDNFSYRICISSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVASF 262
           +VLSEMKENG+ PD FSYRIC+SS  A+SD+  +E++L+EME+Q+HIS+DW TYS VAS 
Sbjct: 192 DVLSEMKENGITPDLFSYRICMSSCAARSDLKGVEEILEEMENQSHISIDWVTYSTVASI 251

Query: 263 FIKASMHEKAISYLRKCEDKVDQDALGFNHLISHYTSLGHKDEVMRLWALQK-KCKKQVN 322
           ++KAS+ EKA+ YL+KCE KV++DALG+NHLIS   SLG KDEVMRLW L K KCKKQVN
Sbjct: 252 YVKASLKEKALIYLKKCEQKVNRDALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVN 311

Query: 323 RDYITMLSSFVKLELLEEAENLLVEWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRN 382
           RDYITML + VKLE LEEA+ LL EWESSC+CYDFRVPN++LIGY Q+GLIE+AE ML++
Sbjct: 312 RDYITMLGALVKLEELEEADKLLQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKD 371

Query: 383 IIKDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWL 442
           I+K  + P+PNSW IIAAGY+ KQN+EKAF  MKEAL V+ +NKGWRPK ++ SSIL WL
Sbjct: 372 IVKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKGWRPKANLISSILSWL 431

Query: 443 SENGRYEELKEFLSSLKTVPSMDGKLNNAL 472
            ENG  E+++ F++ L+T    D ++ + L
Sbjct: 432 GENGDVEDVEAFVNLLETKVPKDREIYHTL 461

BLAST of Cla011782 vs. TrEMBL
Match: M5WGV8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004720mg PE=4 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 1.5e-159
Identity = 285/469 (60.77%), Postives = 366/469 (78.04%), Query Frame = 1

Query: 4   ASAIFKIFRRSSSGCTRTARTETDAFYFVVLRLYSARRSCDRRNLFARISPLGDPELSVV 63
           A A+FK+ +R  +     +  + D           AR + + RNLF+RISPLGDP LSVV
Sbjct: 2   AFAVFKLLKRHQNLAADVSPIKFDC---------RARHTANTRNLFSRISPLGDPSLSVV 61

Query: 64  PVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCSKGLFSLTTRDFAVQLDL 123
           PVL+QW++EG K+  FEL+RIVRDLR  +RY  AL+VSEWM SKGL      D AVQLDL
Sbjct: 62  PVLDQWVQEGGKVNYFELQRIVRDLRARKRYRHALDVSEWMSSKGLCQFLPGDHAVQLDL 121

Query: 124 IGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQKMKEMGFASSPL 183
           IGRVRGLD+AE  F S+S+ E+  K YGALLNCYVREGL+DKSL++MQKMKE+GFA+S L
Sbjct: 122 IGRVRGLDAAESCFSSLSD-EDTSKSYGALLNCYVREGLIDKSLSYMQKMKELGFATS-L 181

Query: 184 CYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGAKSDVISMEKVLKEM 243
            YNDIM LY+ TGQ +K+P+VLSEMKE GV PDNFSYRIC+SSYG +SD+ SMEKVL+EM
Sbjct: 182 NYNDIMRLYIHTGQPEKIPDVLSEMKEEGVSPDNFSYRICMSSYGMRSDISSMEKVLEEM 241

Query: 244 ESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKVDQDALGFNHLISHYTSLGHK 303
           E + HISMDW TY++VA+ +IKA +H+KA+ YL K E+KV++DALG+NHLIS Y SLG K
Sbjct: 242 EREPHISMDWLTYALVANLYIKAGLHDKALIYLEKSEEKVNKDALGYNHLISLYASLGCK 301

Query: 304 DEVMRLWALQK-KCKKQVNRDYITMLSSFVKLELLEEAENLLVEWESSCECYDFRVPNIV 363
           D++MRLW+L+K KCKKQ+NRDYITML S VKL  LEE + LL EWE SC  YDFRVPNI+
Sbjct: 302 DDMMRLWSLEKTKCKKQINRDYITMLGSLVKLGELEETKKLLDEWELSCLSYDFRVPNIL 361

Query: 364 LIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKE 423
           LIGY QKGL+E+AE  LR+I+K G+ P+PNSW I+AAGY++KQ ++KAF+ M EAL ++ 
Sbjct: 362 LIGYCQKGLVEQAEDTLRDIVKKGKTPTPNSWAILAAGYVDKQKMQKAFECMTEALNLRA 421

Query: 424 QNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLNNAL 472
           +N GWRPKP V SS+L W+ +NG  E+++ F+S +KTV +++ ++ +AL
Sbjct: 422 RNTGWRPKPGVVSSVLSWIGDNGDIEQVEAFVSLMKTVITVNREMYHAL 459

BLAST of Cla011782 vs. TrEMBL
Match: V4TX32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007647mg PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 5.8e-159
Identity = 277/430 (64.42%), Postives = 351/430 (81.63%), Query Frame = 1

Query: 32  VVLRLYSARRSCDRRNLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTS 91
           +  R Y A +   R NL++RISPLGDP++S+ PVL+QW+ EG+KI + EL+RI+R LR+ 
Sbjct: 23  IFTRAYRAAKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRIIRQLRSR 82

Query: 92  RRYGQALEVSEWMCSKGLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYG 151
           +R+  AL+VSEWM  +GL + + RD AVQLDLIG+VRGL+SAE YF S+++++++ KLYG
Sbjct: 83  KRFKHALQVSEWMSGQGL-AFSVRDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG 142

Query: 152 ALLNCYVREGLVDKSLAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKEN 211
           ALLNCYVREGLVD+SL+ MQKMKEMG   S L YN IMCLY  TGQ +K+P+VL +MKEN
Sbjct: 143 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 202

Query: 212 GVLPDNFSYRICISSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVASFFIKASMHEK 271
           GV PDNFSYRICI+SYGA+S++ SME VL+EMESQ+HISMDW TYS VA+++I A + EK
Sbjct: 203 GVSPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 262

Query: 272 AISYLRKCEDKV--DQDALGFNHLISHYTSLGHKDEVMRLWALQK-KCKKQVNRDYITML 331
           AI YL+KCED V   +DALG+NHLISHY SL +KDE+M+ W LQK KCKKQ+NRDYIT+L
Sbjct: 263 AIIYLKKCEDIVSKSKDALGYNHLISHYASLRNKDEMMKFWGLQKIKCKKQLNRDYITIL 322

Query: 332 SSFVKLELLEEAENLLVEWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRI 391
            S VK+  LEEAE +L EWESSC CYDFRVPNI+L+GYSQKG+IE+A+ +L+ I+K G+ 
Sbjct: 323 GSLVKIGELEEAEKMLEEWESSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 382

Query: 392 PSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWLSENGRYE 451
           P+PNSW IIAAGY +K N+EKAF+ MKEALAV E+NK WRPKPS+ SSIL WL +N   E
Sbjct: 383 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 442

Query: 452 ELKEFLSSLK 459
           E++ F+SSLK
Sbjct: 443 EVEAFVSSLK 451

BLAST of Cla011782 vs. TrEMBL
Match: F6H257_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02920 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 9.8e-159
Identity = 272/425 (64.00%), Postives = 350/425 (82.35%), Query Frame = 1

Query: 47  NLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCS 106
           NL++RISPLG P LS+VPVL+QW+EEG+K++D EL RI+RDLR+ +RY QALEVSEWM S
Sbjct: 38  NLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSS 97

Query: 107 KGLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKS 166
           K L   +    AVQLDLIG+VRGL+SAE YF ++S +E+I K+YGALLNCYVRE ++DKS
Sbjct: 98  KELCPFSPSARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKS 157

Query: 167 LAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISS 226
           L+H+QKMKE+GFAS+PL YN +MCLY+ T Q +K+P+VLSEM+ENG+ PDNFSYR+CI+S
Sbjct: 158 LSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINS 217

Query: 227 YGAKSDVISMEKVLKEMESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKVDQD 286
           YGA+SD+ SMEK+L+EMES++HI +DW TYSMVA+F+IKA ++EKA+ +L+K E K+ +D
Sbjct: 218 YGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKLHKD 277

Query: 287 ALGFNHLISHYTSLGHKDEVMRLWALQKKC-KKQVNRDYITMLSSFVKLELLEEAENLLV 346
            LG+NHLIS Y SLG K E+MRLW  +K   KK +NRDYITML S VKL  LE+ E LL 
Sbjct: 278 PLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLK 337

Query: 347 EWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQ 406
           EWESS  CYDFRVPN +LIG+ QKGLIE+AE MLR+I+++G+ P+PNSW I+AAGY+EKQ
Sbjct: 338 EWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQ 397

Query: 407 NLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSLKTVPSMDG 466
           N+EKAF+ MKEA+AV  +NKGWRPKP V SSIL WL +N   EE++ F+S+LK V  MD 
Sbjct: 398 NMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDR 457

Query: 467 KLNNA 471
           ++ +A
Sbjct: 458 EMYHA 462

BLAST of Cla011782 vs. NCBI nr
Match: gi|449431834|ref|XP_004133705.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 854.0 bits (2205), Expect = 1.3e-244
Identity = 423/482 (87.76%), Postives = 451/482 (93.57%), Query Frame = 1

Query: 1   MAAASAIFKIFRRSSSGCTRTARTETDAFYFVVLRLYSARRSCDRRNLFARISPLGDPEL 60
           MAAASA+FKI  RSSSGCTRT R ETDAF FV LRLYS RRSCDRRNL+ARISPLGDPE 
Sbjct: 1   MAAASAMFKILSRSSSGCTRTLRPETDAFCFVALRLYSTRRSCDRRNLYARISPLGDPEC 60

Query: 61  SVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCSKGLFSLTTRDFAVQ 120
           +VVPVLNQWIEEGR IKDFELRRIVRDLRT RRY QALEVSEWMCSKGLFSLTTRDFA+Q
Sbjct: 61  TVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGLFSLTTRDFAIQ 120

Query: 121 LDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQKMKEMGFAS 180
           LDLIG+VRGLDSAEKYFGSVSNQ+EIGKLYGALLNCYVREGL+DKSLAHMQKMKEMG AS
Sbjct: 121 LDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLAS 180

Query: 181 SPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGAKSDVISMEKVL 240
           SPLCYNDIMCLYL TGQADKVPNVLSEMKENGVLPDNFSYRICISSYGA+SDVISME VL
Sbjct: 181 SPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVL 240

Query: 241 KEMESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKVDQDALGFNHLISHYTSL 300
           KEME QTHISMDWTTYSMVA FFIKA MH+KA++YLRKCEDKVD+DALGFNHLISHYT+L
Sbjct: 241 KEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCEDKVDEDALGFNHLISHYTNL 300

Query: 301 GHKDEVMRLWALQKKCKKQVNRDYITMLSSFVKLELLEEAENLLVEWESSCECYDFRVPN 360
           GHK+EVMRLWAL KK KKQ+NRDYITML S VKLELLEEAENL++EWESSC+CYDFRVPN
Sbjct: 301 GHKNEVMRLWALLKKGKKQLNRDYITMLGSLVKLELLEEAENLVMEWESSCQCYDFRVPN 360

Query: 361 IVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 420
           +VLIGYSQKGLIE+AEKMLRNII +G IPSPNSWGIIA+GYLEKQNLEKAF+ MKEALAV
Sbjct: 361 VVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALAV 420

Query: 421 KEQNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLNNALDELLKTL-N 480
           K QNK WRPKP+V SSILRWLSEN RYEE+KEF+SSLKTVPSMD KLNNALDELL+ + N
Sbjct: 421 KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNNALDELLEIMAN 480

Query: 481 DD 482
           DD
Sbjct: 481 DD 482

BLAST of Cla011782 vs. NCBI nr
Match: gi|659102689|ref|XP_008452263.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cucumis melo])

HSP 1 Score: 835.1 bits (2156), Expect = 6.2e-239
Identity = 412/481 (85.65%), Postives = 445/481 (92.52%), Query Frame = 1

Query: 1   MAAASAIFKIFRRSSSGCTRTARTETDAFYFVVLRLYSARRSCDRRNLFARISPLGDPEL 60
           MAAASA+FKI  RSSSGCTRT R ETDAF FV LRLYS RRSC+RR L+A ISPLGDP+ 
Sbjct: 1   MAAASAMFKILSRSSSGCTRTPRPETDAFCFVALRLYSTRRSCNRRKLYAMISPLGDPDS 60

Query: 61  SVVPVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCSKGLFSLTTRDFAVQ 120
           SVVPVLNQWI+EGRKIKDFELRRIVRDLRT RRY QALEVSEWMCSKG FSLTTRDFA+Q
Sbjct: 61  SVVPVLNQWIKEGRKIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGRFSLTTRDFAIQ 120

Query: 121 LDLIGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQKMKEMGFAS 180
           LDLIG+VRGLDSAEKYFGSVS Q+EIGKLYG+LLNCYVREGL+DKSLAHMQKMKEMGFAS
Sbjct: 121 LDLIGQVRGLDSAEKYFGSVSKQKEIGKLYGSLLNCYVREGLIDKSLAHMQKMKEMGFAS 180

Query: 181 SPLCYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGAKSDVISMEKVL 240
           SPLCYNDIMCLYL TGQADKVPNVLSEMKENGVLPDNFSYRICISSYGA+SDVISME VL
Sbjct: 181 SPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISMENVL 240

Query: 241 KEMESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKVDQDALGFNHLISHYTSL 300
           KEMESQTHISMDW TYSMVA FFIK  MH+KA +YLRKCED+VDQDALGFNHLISHYT+L
Sbjct: 241 KEMESQTHISMDWITYSMVAGFFIKVVMHDKARNYLRKCEDRVDQDALGFNHLISHYTNL 300

Query: 301 GHKDEVMRLWALQKKCKKQVNRDYITMLSSFVKLELLEEAENLLVEWESSCECYDFRVPN 360
           GHK+EVMRLWALQKK KKQ+NRDYITML S VKL+LLEEAENL++EWESSC+C DFRVPN
Sbjct: 301 GHKNEVMRLWALQKKAKKQLNRDYITMLGSLVKLDLLEEAENLVMEWESSCQCNDFRVPN 360

Query: 361 IVLIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAV 420
           +VLIGYSQ GLIE+AEKMLRNII +G IPSPNSWGIIA+GYLEKQNLEKAF+ MKEALAV
Sbjct: 361 VVLIGYSQNGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFECMKEALAV 420

Query: 421 KEQNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLNNALDELLKTLND 480
           K QNK WRPKP+V SSILRWLSEN RYEE+KEF+SSLKTVPSMD KLN+ALDELL+ + +
Sbjct: 421 KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLKTVPSMDEKLNSALDELLEIMEN 480

Query: 481 D 482
           D
Sbjct: 481 D 481

BLAST of Cla011782 vs. NCBI nr
Match: gi|255573349|ref|XP_002527601.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Ricinus communis])

HSP 1 Score: 580.1 bits (1494), Expect = 3.6e-162
Identity = 284/450 (63.11%), Postives = 358/450 (79.56%), Query Frame = 1

Query: 23  RTETDAFYFVVLRLYSARRSCDRRNLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELR 82
           RT++     ++ R Y  +       LFARISPLG+P++S+VPVL+ W++EG+KI+ FEL+
Sbjct: 12  RTQSLTANAILTRRYYNKARTASNTLFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQ 71

Query: 83  RIVRDLRTSRRYGQALEVSEWMCSKGLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSN 142
           +I+RDLR  RRY QAL+VSEWM  KG    +  D AVQLDLIGRVRGL+SAE YF ++ N
Sbjct: 72  KIIRDLRCHRRYTQALQVSEWMNGKGQSGFSPADHAVQLDLIGRVRGLESAESYFQNLVN 131

Query: 143 QEEIGKLYGALLNCYVREGLVDKSLAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVP 202
           Q+   K YGALLNCYVREGLVDKSL HMQKMKE+GFASSPL YND+MCLY +TGQ +KV 
Sbjct: 132 QDRNDKTYGALLNCYVREGLVDKSLYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVT 191

Query: 203 NVLSEMKENGVLPDNFSYRICISSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVASF 262
           +VLSEMKENG+ PD FSYRIC+SS  A+SD+  +E++L+EME+Q+HIS+DW TYS VAS 
Sbjct: 192 DVLSEMKENGITPDLFSYRICMSSCAARSDLKGVEEILEEMENQSHISIDWVTYSTVASI 251

Query: 263 FIKASMHEKAISYLRKCEDKVDQDALGFNHLISHYTSLGHKDEVMRLWALQK-KCKKQVN 322
           ++KAS+ EKA+ YL+KCE KV++DALG+NHLIS   SLG KDEVMRLW L K KCKKQVN
Sbjct: 252 YVKASLKEKALIYLKKCEQKVNRDALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVN 311

Query: 323 RDYITMLSSFVKLELLEEAENLLVEWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRN 382
           RDYITML + VKLE LEEA+ LL EWESSC+CYDFRVPN++LIGY Q+GLIE+AE ML++
Sbjct: 312 RDYITMLGALVKLEELEEADKLLQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKD 371

Query: 383 IIKDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWL 442
           I+K  + P+PNSW IIAAGY+ KQN+EKAF  MKEAL V+ +NKGWRPK ++ SSIL WL
Sbjct: 372 IVKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMKEALTVQAENKGWRPKANLISSILSWL 431

Query: 443 SENGRYEELKEFLSSLKTVPSMDGKLNNAL 472
            ENG  E+++ F++ L+T    D ++ + L
Sbjct: 432 GENGDVEDVEAFVNLLETKVPKDREIYHTL 461

BLAST of Cla011782 vs. NCBI nr
Match: gi|595864874|ref|XP_007211848.1| (hypothetical protein PRUPE_ppa004720mg [Prunus persica])

HSP 1 Score: 570.9 bits (1470), Expect = 2.2e-159
Identity = 285/469 (60.77%), Postives = 366/469 (78.04%), Query Frame = 1

Query: 4   ASAIFKIFRRSSSGCTRTARTETDAFYFVVLRLYSARRSCDRRNLFARISPLGDPELSVV 63
           A A+FK+ +R  +     +  + D           AR + + RNLF+RISPLGDP LSVV
Sbjct: 2   AFAVFKLLKRHQNLAADVSPIKFDC---------RARHTANTRNLFSRISPLGDPSLSVV 61

Query: 64  PVLNQWIEEGRKIKDFELRRIVRDLRTSRRYGQALEVSEWMCSKGLFSLTTRDFAVQLDL 123
           PVL+QW++EG K+  FEL+RIVRDLR  +RY  AL+VSEWM SKGL      D AVQLDL
Sbjct: 62  PVLDQWVQEGGKVNYFELQRIVRDLRARKRYRHALDVSEWMSSKGLCQFLPGDHAVQLDL 121

Query: 124 IGRVRGLDSAEKYFGSVSNQEEIGKLYGALLNCYVREGLVDKSLAHMQKMKEMGFASSPL 183
           IGRVRGLD+AE  F S+S+ E+  K YGALLNCYVREGL+DKSL++MQKMKE+GFA+S L
Sbjct: 122 IGRVRGLDAAESCFSSLSD-EDTSKSYGALLNCYVREGLIDKSLSYMQKMKELGFATS-L 181

Query: 184 CYNDIMCLYLKTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGAKSDVISMEKVLKEM 243
            YNDIM LY+ TGQ +K+P+VLSEMKE GV PDNFSYRIC+SSYG +SD+ SMEKVL+EM
Sbjct: 182 NYNDIMRLYIHTGQPEKIPDVLSEMKEEGVSPDNFSYRICMSSYGMRSDISSMEKVLEEM 241

Query: 244 ESQTHISMDWTTYSMVASFFIKASMHEKAISYLRKCEDKVDQDALGFNHLISHYTSLGHK 303
           E + HISMDW TY++VA+ +IKA +H+KA+ YL K E+KV++DALG+NHLIS Y SLG K
Sbjct: 242 EREPHISMDWLTYALVANLYIKAGLHDKALIYLEKSEEKVNKDALGYNHLISLYASLGCK 301

Query: 304 DEVMRLWALQK-KCKKQVNRDYITMLSSFVKLELLEEAENLLVEWESSCECYDFRVPNIV 363
           D++MRLW+L+K KCKKQ+NRDYITML S VKL  LEE + LL EWE SC  YDFRVPNI+
Sbjct: 302 DDMMRLWSLEKTKCKKQINRDYITMLGSLVKLGELEETKKLLDEWELSCLSYDFRVPNIL 361

Query: 364 LIGYSQKGLIERAEKMLRNIIKDGRIPSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKE 423
           LIGY QKGL+E+AE  LR+I+K G+ P+PNSW I+AAGY++KQ ++KAF+ M EAL ++ 
Sbjct: 362 LIGYCQKGLVEQAEDTLRDIVKKGKTPTPNSWAILAAGYVDKQKMQKAFECMTEALNLRA 421

Query: 424 QNKGWRPKPSVFSSILRWLSENGRYEELKEFLSSLKTVPSMDGKLNNAL 472
           +N GWRPKP V SS+L W+ +NG  E+++ F+S +KTV +++ ++ +AL
Sbjct: 422 RNTGWRPKPGVVSSVLSWIGDNGDIEQVEAFVSLMKTVITVNREMYHAL 459

BLAST of Cla011782 vs. NCBI nr
Match: gi|985428465|ref|XP_015388814.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Citrus sinensis])

HSP 1 Score: 570.5 bits (1469), Expect = 2.8e-159
Identity = 277/430 (64.42%), Postives = 352/430 (81.86%), Query Frame = 1

Query: 32  VVLRLYSARRSCDRRNLFARISPLGDPELSVVPVLNQWIEEGRKIKDFELRRIVRDLRTS 91
           +  R Y A +   R NL++RISPLGDP++S+ PVL+QW+ EG+KI + EL+R++R LR+ 
Sbjct: 23  IFTRAYRAVKPVARNNLYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRVIRQLRSR 82

Query: 92  RRYGQALEVSEWMCSKGLFSLTTRDFAVQLDLIGRVRGLDSAEKYFGSVSNQEEIGKLYG 151
           +R+  AL+VSEWM  +GL + +  D AVQLDLIG+VRGL+SAE YF S+++++++ KLYG
Sbjct: 83  KRFKHALQVSEWMSGQGL-AFSVHDHAVQLDLIGKVRGLESAETYFNSLNDEDKVDKLYG 142

Query: 152 ALLNCYVREGLVDKSLAHMQKMKEMGFASSPLCYNDIMCLYLKTGQADKVPNVLSEMKEN 211
           ALLNCYVREGLVD+SL+ MQKMKEMG   S L YN IMCLY  TGQ +K+P+VL +MKEN
Sbjct: 143 ALLNCYVREGLVDESLSLMQKMKEMGSFGSALNYNGIMCLYTNTGQHEKIPDVLLDMKEN 202

Query: 212 GVLPDNFSYRICISSYGAKSDVISMEKVLKEMESQTHISMDWTTYSMVASFFIKASMHEK 271
           GV PDNFSYRICI+SYGA+S++ SME VL+EMESQ+HISMDW TYS VA+++I A + EK
Sbjct: 203 GVPPDNFSYRICINSYGARSELSSMENVLQEMESQSHISMDWGTYSTVANYYIIAGLKEK 262

Query: 272 AISYLRKCEDKV--DQDALGFNHLISHYTSLGHKDEVMRLWALQK-KCKKQVNRDYITML 331
           AI YL+KCED V   +DALG+NHLISHY+SLG+KDE+M+ W LQK KCKKQ+NRDYITML
Sbjct: 263 AIIYLKKCEDIVSKSKDALGYNHLISHYSSLGNKDEMMKFWGLQKIKCKKQLNRDYITML 322

Query: 332 SSFVKLELLEEAENLLVEWESSCECYDFRVPNIVLIGYSQKGLIERAEKMLRNIIKDGRI 391
            S VK+  LEEAE +L EWESSC CYDFRVPNI+L+GYSQKG+IE+A+ +L+ I+K G+ 
Sbjct: 323 GSLVKIGELEEAEKMLEEWESSCYCYDFRVPNIILLGYSQKGMIEKADAVLKEIVKKGKT 382

Query: 392 PSPNSWGIIAAGYLEKQNLEKAFQSMKEALAVKEQNKGWRPKPSVFSSILRWLSENGRYE 451
           P+PNSW IIAAGY +K N+EKAF+ MKEALAV E+NK WRPKPS+ SSIL WL +N   E
Sbjct: 383 PTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVE 442

Query: 452 ELKEFLSSLK 459
           E++ F+SSLK
Sbjct: 443 EVEAFVSSLK 451

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP334_ARATH1.8e-11345.04Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop... [more]
PP166_ARATH3.7e-7435.45Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
PPR3_ARATH2.3e-6834.47Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN... [more]
PPR86_ARATH9.4e-6231.16Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN... [more]
PP302_ARATH5.1e-6033.49Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0L7Y2_CUCSA9.0e-24587.76Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104890 PE=4 SV=1[more]
B9SNN7_RICCO2.5e-16263.11Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
M5WGV8_PRUPE1.5e-15960.77Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004720mg PE=4 SV=1[more]
V4TX32_9ROSI5.8e-15964.42Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007647mg PE=4 SV=1[more]
F6H257_VITVI9.8e-15964.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02920 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
gi|449431834|ref|XP_004133705.1|1.3e-24487.76PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-... [more]
gi|659102689|ref|XP_008452263.1|6.2e-23985.65PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-... [more]
gi|255573349|ref|XP_002527601.1|3.6e-16263.11PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial ... [more]
gi|595864874|ref|XP_007211848.1|2.2e-15960.77hypothetical protein PRUPE_ppa004720mg [Prunus persica][more]
gi|985428465|ref|XP_015388814.1|2.8e-15964.42PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009451 RNA modification
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011782Cla011782.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 324..349
score: 0.21coord: 360..386
score: 0.04coord: 150..178
score: 4.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 184..227
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 184..216
score: 3.3E-5coord: 149..178
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 181..215
score: 9.953coord: 146..180
score: 8.462coord: 286..320
score: 6.314coord: 390..424
score: 5.152coord: 355..389
score: 8.396coord: 430..460
score: 6.018coord: 252..282
score: 5.842coord: 216..250
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 140..198
score: 4.0E-11coord: 255..306
score: 4.0E-11coord: 372..449
score: 4.0
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 267..303
score: 8.86E-6coord: 158..205
score: 8.86E-6coord: 397..425
score: 8.8
NoneNo IPR availableunknownCoilCoilcoord: 404..424
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 47..464
score: 4.3E
NoneNo IPR availablePANTHERPTHR24015:SF671SUBFAMILY NOT NAMEDcoord: 47..464
score: 4.3E