BLAST of Lsi05G004470 vs. Swiss-Prot
Match:
PP257_ARATH (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2 SV=1)
HSP 1 Score: 369.0 bits (946), Expect = 7.1e-101
Identity = 194/409 (47.43%), Postives = 269/409 (65.77%), Query Frame = 1
Query: 30 PWRFPVANSSLQCLSN----GEFNPSLFIHNLNSP--LFGQSFPLDSHFPR----KIRFR 89
P+R P A+ L+ SN + + + HNL + L Q + S F + F
Sbjct: 17 PFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFN 76
Query: 90 NVRMPQFLSFSCLSSLRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFLIKACTVSFA 149
++ P +++ + +R+ ++N +AL+L+ M+ DKFTFPF+IKAC S +
Sbjct: 77 QLQSPSTFTWNLM--IRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSS 136
Query: 150 INLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISG 209
I LG VH IK GF D F QN L+D YFKCG G KVF+KM ++VSWTTM+ G
Sbjct: 137 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 196
Query: 210 LVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYTM 269
LV + A +F++MP +NVVSWTAMI Y++N+RP+EA +LF+RMQ +++ PNE+T+
Sbjct: 197 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 256
Query: 270 VSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 329
V+L++A T++G LS+GR +HDYA KN F + +LGTALIDMYSKCGS++DA +VF+ M
Sbjct: 257 VNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG 316
Query: 330 RSLPTWNSMITSLGVHGLGQEALNLFSEM-ERINVKPDAITFVGVLCACVHMKNVKAGCA 389
+SL TWNSMITSLGVHG G+EAL+LF EM E +V+PDAITFVGVL AC + NVK G
Sbjct: 317 KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLR 376
Query: 390 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPDEDS 427
YF RM Q YGI+PI EH CM +L ++ +++A E+M +PD +S
Sbjct: 377 YFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNS 423
BLAST of Lsi05G004470 vs. Swiss-Prot
Match:
PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 257.7 bits (657), Expect = 2.3e-67
Identity = 127/354 (35.88%), Postives = 202/354 (57.06%), Query Frame = 1
Query: 78 FRNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSF 137
F ++ P F+ L +R + +A Y M+ I D TFPFLIKA +
Sbjct: 74 FSQIQNPNLFVFNLL--IRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEME 133
Query: 138 AINLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMIS 197
+ +G+ H+ ++++GF D +V+N+L+ Y CG ++F +M +VVSWT+M++
Sbjct: 134 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 193
Query: 198 GLVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYT 257
G CG V+ AR +FDEMP +N+ +W+ MINGY +N E+A++LF+ M+ E + NE
Sbjct: 194 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 253
Query: 258 MVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 317
MVS+I +C +G L G ++Y +K+ + + LGTAL+DM+ +CG I+ AI VFE +P
Sbjct: 254 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 313
Query: 318 RRSLPTWNSMITSLGVHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCA 377
+W+S+I L VHG +A++ FS+M + P +TF VL AC H V+ G
Sbjct: 314 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 373
Query: 378 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPDEDSLAFLL 432
++ M + +GI P EH C+ ++ R+ L EA M ++P+ L LL
Sbjct: 374 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
BLAST of Lsi05G004470 vs. Swiss-Prot
Match:
PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 252.3 bits (643), Expect = 9.7e-66
Identity = 121/331 (36.56%), Postives = 197/331 (59.52%), Query Frame = 1
Query: 95 LRANTINGLSEQALMLYKNMVCQG--IAADKFTFPFLIKACTVSFAINLGKVVHASLIKY 154
+R + + E A+ ++ +M+C + + T+P + KA G+ +H +IK
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 155 GFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISGLVFCGDVQEARRIF 214
G D+F++N ++ Y CG ++F M +VV+W +MI G CG + +A+ +F
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 215 DEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILS 274
DEMP +N VSW +MI+G++RN R ++AL++F+ MQ +++ P+ +TMVSL+ AC +G
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 275 LGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLG 334
GR IH+Y ++N FE+ + TALIDMY KCG I++ + VFE P++ L WNSMI L
Sbjct: 276 QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLA 335
Query: 335 VHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCAYFKRMTQHYGIAPIP 394
+G + A++LFSE+ER ++PD+++F+GVL AC H V +F+ M + Y I P
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSI 395
Query: 395 EHCKCMAELYARSNSLDEAFKSTEAMSMEPD 424
+H M + + L+EA + M +E D
Sbjct: 396 KHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426
BLAST of Lsi05G004470 vs. Swiss-Prot
Match:
PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 2.2e-65
Identity = 129/337 (38.28%), Postives = 201/337 (59.64%), Query Frame = 1
Query: 89 FSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSFAINLGKVVHAS 148
F +++ +INGL +QA +LY ++ I ++FTF L+K+C+ GK++H
Sbjct: 96 FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTH 155
Query: 149 LIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISGLVFCGDVQEA 208
++K+G D +V L+D Y K G KVF++M ++VS T MI+ G+V+ A
Sbjct: 156 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 215
Query: 209 RRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENIC-PNEYTMVSLIKACTE 268
R +FD M +++VSW MI+GY ++ P +AL LF+++ AE P+E T+V+ + AC++
Sbjct: 216 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 275
Query: 269 MGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSM 328
+G L GR IH + + + V + T LIDMYSKCGS+++A+ VF PR+ + WN+M
Sbjct: 276 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 335
Query: 329 ITSLGVHGLGQEALNLFSEMERI-NVKPDAITFVGVLCACVHMKNVKAGCAYFKRMTQHY 388
I +HG Q+AL LF+EM+ I ++P ITF+G L AC H V G F+ M Q Y
Sbjct: 336 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEY 395
Query: 389 GIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPD 424
GI P EH C+ L R+ L A+++ + M+M+ D
Sbjct: 396 GIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
BLAST of Lsi05G004470 vs. Swiss-Prot
Match:
PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1)
HSP 1 Score: 249.6 bits (636), Expect = 6.3e-65
Identity = 125/352 (35.51%), Postives = 204/352 (57.95%), Query Frame = 1
Query: 79 RNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSFA 138
R++++ FL + ++ N + + +Y M ++ D TFPFL+ +
Sbjct: 18 RHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLH 77
Query: 139 INLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISG 198
+ LG+ HA ++ +G D FV+ +L++ Y CG +VF+ ++ +W ++++
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 199 LVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAEN-----ICP 258
G + +AR++FDEMP +NV+SW+ +INGY+ + +EAL+LF+ MQ + P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 259 NEYTMVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVF 318
NE+TM +++ AC +G L G+ +H Y K EI + LGTALIDMY+KCGS++ A VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 319 ETM-PRRSLPTWNSMITSLGVHGLGQEALNLFSEMERI-NVKPDAITFVGVLCACVHMKN 378
+ ++ + +++MI L ++GL E LFSEM N+ P+++TFVG+L ACVH
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 379 VKAGCAYFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPD 424
+ G +YFK M + +GI P +H CM +LY RS + EA +M MEPD
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD 369
BLAST of Lsi05G004470 vs. TrEMBL
Match:
A0A0A0LDS1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G598920 PE=4 SV=1)
HSP 1 Score: 582.8 bits (1501), Expect = 3.5e-163
Identity = 279/315 (88.57%), Postives = 297/315 (94.29%), Query Frame = 1
Query: 109 MLYKNMVCQGIAADKFTFPFLIKACTVSFAINLGKVVHASLIKYGFSGDTFVQNNLIDFY 168
MLYKNMVCQGIAADKFTFPF+IKACT +I+LGKVVH SLIKYGFSGD FVQNNLIDFY
Sbjct: 1 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 60
Query: 169 FKCGHKHCGLKVFEKMRVCNVVSWTTMISGLVFCGDVQEARRIFDEMPSKNVVSWTAMIN 228
FKCGH LKVFEKMRV NVVSWTT+ISGL+ CGD+QEARRIFDE+PSKNVVSWTAMIN
Sbjct: 61 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 120
Query: 229 GYIRNQRPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAIKNSFEI 288
GYIRNQ+PEEALELFKRMQAENI PNEYTMVSLIKACTEMGIL+LGRGIHDYAIKN EI
Sbjct: 121 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI 180
Query: 289 GVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVHGLGQEALNLFSEME 348
GVYLGTALIDMYSKCGSIKDAIEVFETMPR+SLPTWNSMITSLGVHGLGQEALNLFSEME
Sbjct: 181 GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEME 240
Query: 349 RINVKPDAITFVGVLCACVHMKNVKAGCAYFKRMTQHYGIAPIPEHCKCMAELYARSNSL 408
R+NVKPDAITF+GVLCACVH+KNVK GCAYF RMTQHYGIAPIPEH +CM ELYARSN+L
Sbjct: 241 RVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNL 300
Query: 409 DEAFKSTEAMSMEPD 424
DEAFKST+A+S+EPD
Sbjct: 301 DEAFKSTKAISIEPD 315
BLAST of Lsi05G004470 vs. TrEMBL
Match:
M5X9V5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022877mg PE=4 SV=1)
HSP 1 Score: 444.1 bits (1141), Expect = 1.9e-121
Identity = 212/341 (62.17%), Postives = 264/341 (77.42%), Query Frame = 1
Query: 78 FRNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSF 137
F ++ P L+F+ + + TING S++AL+LY M+ QG DKFTFPF+IKAC S
Sbjct: 8 FHQIQGP--LTFTWNLMIMSYTINGCSQEALLLYSLMIHQGFPPDKFTFPFVIKACIASS 67
Query: 138 AINLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMIS 197
A GKVVH IK FS D FVQN L+DFYFKCG CG +VFEKMRV NVVSWTTMIS
Sbjct: 68 AFEQGKVVHGLSIKNSFSRDMFVQNTLMDFYFKCGEIDCGCRVFEKMRVRNVVSWTTMIS 127
Query: 198 GLVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYT 257
GLV CG++ AR +F+ MP+KNVVSWTAM+NGY+RNQ+PEEA ELF RMQ ++ PNE+T
Sbjct: 128 GLVACGELHAARAVFERMPAKNVVSWTAMMNGYVRNQQPEEAFELFWRMQVGDVRPNEFT 187
Query: 258 MVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 317
+VSL+KACT +G L LGR IHD+A+KN F++ V+LGTALID YSKCGS++DA VF+ M
Sbjct: 188 LVSLLKACTLLGSLKLGRWIHDFALKNGFKLDVFLGTALIDTYSKCGSLEDARRVFDEMR 247
Query: 318 RRSLPTWNSMITSLGVHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCA 377
+SL TWN+MITSLGVHG G+EAL LF+EME++NV+PDAITFVGVL AC+H N++AGC
Sbjct: 248 IKSLATWNAMITSLGVHGFGEEALALFAEMEKVNVRPDAITFVGVLSACLHTNNLEAGCM 307
Query: 378 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAM 419
YFK M++HYGI PI EH CM ELY+R++ LDE K ++M
Sbjct: 308 YFKYMSKHYGITPILEHYTCMIELYSRADMLDEVCKLAQSM 346
BLAST of Lsi05G004470 vs. TrEMBL
Match:
V4W2D6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018065mg PE=4 SV=1)
HSP 1 Score: 427.6 bits (1098), Expect = 1.9e-116
Identity = 206/354 (58.19%), Postives = 260/354 (73.45%), Query Frame = 1
Query: 78 FRNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSF 137
F ++ P +++ + +RA TING S QAL+LY M+C G DKFTFPF+ KAC S
Sbjct: 85 FSQIQCPHVFTWNLM--IRALTINGSSRQALLLYNLMICNGFRPDKFTFPFVFKACITSL 144
Query: 138 AINLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMIS 197
AI GK VH +K GFS D FVQN L+D YFKCG + G KVF+KMRV +VVSWTTMIS
Sbjct: 145 AIEKGKEVHGLAVKAGFSRDMFVQNTLMDLYFKCGDVNGGRKVFDKMRVRSVVSWTTMIS 204
Query: 198 GLVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYT 257
GL GD+ ARR+F++M ++NVVSWTAMIN Y+RN+R EA ELF+RM +N+ PNE+T
Sbjct: 205 GLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNERAHEAFELFQRMLLDNVRPNEFT 264
Query: 258 MVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 317
+VSL++ACTE+G L LG IHD+A+KN F +GVYLGTALIDMYSKCGS++DA +VF+ M
Sbjct: 265 LVSLLQACTELGSLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFDKME 324
Query: 318 RRSLPTWNSMITSLGVHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCA 377
++L TWNSMITSLGVHG G+EAL LF++ME NV+PDAITFVGVLCACVH NV G
Sbjct: 325 IKNLATWNSMITSLGVHGHGEEALALFAQMENANVQPDAITFVGVLCACVHTNNVNEGYR 384
Query: 378 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPDEDSLAFLL 432
YF+ M +HYGI+PI EH C+ ELY R+ DE + +S + +E + LL
Sbjct: 385 YFRYMREHYGISPIEEHYTCLIELYNRAKMKDEVSEELNTISEDLNERTAVELL 436
BLAST of Lsi05G004470 vs. TrEMBL
Match:
A0A067LBM9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26918 PE=4 SV=1)
HSP 1 Score: 425.6 bits (1093), Expect = 7.1e-116
Identity = 205/354 (57.91%), Postives = 261/354 (73.73%), Query Frame = 1
Query: 78 FRNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSF 137
F ++ P +++ + +RA T NG S++AL LY M+C+G DKFTFPF++KAC S
Sbjct: 89 FHQIQNPHTFTWNFM--IRAYTKNGNSQEALFLYNLMICRGFPPDKFTFPFVVKACLSSS 148
Query: 138 AINLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMIS 197
A++ GK +H IK GF DTF+ N L+D YFKCG G K+F+KMRV +VVSWTT ++
Sbjct: 149 ALDKGKEIHGFAIKTGFWKDTFLHNTLMDLYFKCGDFDYGRKLFDKMRVRSVVSWTTFVA 208
Query: 198 GLVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYT 257
GLV G++ AR+ FDEMP KNVVSWTAMINGY++NQR +EA ELF RMQ +N+ PNE+T
Sbjct: 209 GLVASGELDAARKAFDEMPMKNVVSWTAMINGYVKNQRAQEAFELFWRMQLDNVRPNEFT 268
Query: 258 MVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 317
+V L+KACTE+G L LG IH+YA+KN F++GV+LGTALIDMYSKCGS++DA +VF+ M
Sbjct: 269 LVGLLKACTELGSLQLGSWIHEYALKNGFKLGVFLGTALIDMYSKCGSLEDAKQVFDKME 328
Query: 318 RRSLPTWNSMITSLGVHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCA 377
+SL TWNSMITSLGVHG G+EAL LF+ ME NV+PDAITFVGVLCACVH NV+ G
Sbjct: 329 IKSLATWNSMITSLGVHGFGKEALALFARMEEANVQPDAITFVGVLCACVHTINVEEGIR 388
Query: 378 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPDEDSLAFLL 432
YFK MT+ YGI P+ EH CM ELY R+N LDE + +M +E A L+
Sbjct: 389 YFKYMTECYGIMPVLEHYTCMIELYTRANMLDEVRELINSMPVELSSSPAAALI 440
BLAST of Lsi05G004470 vs. TrEMBL
Match:
B9RGS8_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1443630 PE=4 SV=1)
HSP 1 Score: 423.7 bits (1088), Expect = 2.7e-115
Identity = 203/354 (57.34%), Postives = 264/354 (74.58%), Query Frame = 1
Query: 78 FRNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSF 137
F ++ P +++ + +RA NG S+QAL+LY M+C+G + DKFTFPF+IKAC
Sbjct: 87 FDQIQNPHTFTWNFM--IRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKACLDHS 146
Query: 138 AINLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMIS 197
A++ GK VH IK GF DTF+ N L+D YFKCG K+F+KM V +VVSWTT ++
Sbjct: 147 ALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVVSWTTFVA 206
Query: 198 GLVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYT 257
GLV CG++ AR FDEMP +NVVSWTAMINGY++NQRP+EA ELF+RMQ N+ PN +T
Sbjct: 207 GLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFT 266
Query: 258 MVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 317
+V L++ACTE+G L LGR IH+YA++N F++GV+LGTALIDMYSKCGSI+DA +VFE M
Sbjct: 267 LVGLLRACTELGSLELGRRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQ 326
Query: 318 RRSLPTWNSMITSLGVHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCA 377
++SL TWNSMITSLGVHG G+EAL LF++ME NV+PDAITFVGVL ACV+ NV+AG
Sbjct: 327 KKSLATWNSMITSLGVHGFGKEALALFAQMEEANVRPDAITFVGVLFACVNTNNVEAGYR 386
Query: 378 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPDEDSLAFLL 432
YFK MT+HYGI P+ EH CM ELY R+ L+E + +M M+ + + A L+
Sbjct: 387 YFKYMTEHYGITPMLEHYTCMIELYTRAAMLNEVSELVNSMPMKLNSNPAAALV 438
BLAST of Lsi05G004470 vs. TAIR10
Match:
AT3G26630.1 (AT3G26630.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 369.0 bits (946), Expect = 4.0e-102
Identity = 194/409 (47.43%), Postives = 269/409 (65.77%), Query Frame = 1
Query: 30 PWRFPVANSSLQCLSN----GEFNPSLFIHNLNSP--LFGQSFPLDSHFPR----KIRFR 89
P+R P A+ L+ SN + + + HNL + L Q + S F + F
Sbjct: 17 PFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFN 76
Query: 90 NVRMPQFLSFSCLSSLRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFLIKACTVSFA 149
++ P +++ + +R+ ++N +AL+L+ M+ DKFTFPF+IKAC S +
Sbjct: 77 QLQSPSTFTWNLM--IRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSS 136
Query: 150 INLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISG 209
I LG VH IK GF D F QN L+D YFKCG G KVF+KM ++VSWTTM+ G
Sbjct: 137 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 196
Query: 210 LVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYTM 269
LV + A +F++MP +NVVSWTAMI Y++N+RP+EA +LF+RMQ +++ PNE+T+
Sbjct: 197 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 256
Query: 270 VSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 329
V+L++A T++G LS+GR +HDYA KN F + +LGTALIDMYSKCGS++DA +VF+ M
Sbjct: 257 VNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG 316
Query: 330 RSLPTWNSMITSLGVHGLGQEALNLFSEM-ERINVKPDAITFVGVLCACVHMKNVKAGCA 389
+SL TWNSMITSLGVHG G+EAL+LF EM E +V+PDAITFVGVL AC + NVK G
Sbjct: 317 KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLR 376
Query: 390 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPDEDS 427
YF RM Q YGI+PI EH CM +L ++ +++A E+M +PD +S
Sbjct: 377 YFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNS 423
BLAST of Lsi05G004470 vs. TAIR10
Match:
AT5G06540.1 (AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 257.7 bits (657), Expect = 1.3e-68
Identity = 127/354 (35.88%), Postives = 202/354 (57.06%), Query Frame = 1
Query: 78 FRNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSF 137
F ++ P F+ L +R + +A Y M+ I D TFPFLIKA +
Sbjct: 74 FSQIQNPNLFVFNLL--IRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEME 133
Query: 138 AINLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMIS 197
+ +G+ H+ ++++GF D +V+N+L+ Y CG ++F +M +VVSWT+M++
Sbjct: 134 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 193
Query: 198 GLVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYT 257
G CG V+ AR +FDEMP +N+ +W+ MINGY +N E+A++LF+ M+ E + NE
Sbjct: 194 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 253
Query: 258 MVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 317
MVS+I +C +G L G ++Y +K+ + + LGTAL+DM+ +CG I+ AI VFE +P
Sbjct: 254 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 313
Query: 318 RRSLPTWNSMITSLGVHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCA 377
+W+S+I L VHG +A++ FS+M + P +TF VL AC H V+ G
Sbjct: 314 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 373
Query: 378 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPDEDSLAFLL 432
++ M + +GI P EH C+ ++ R+ L EA M ++P+ L LL
Sbjct: 374 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
BLAST of Lsi05G004470 vs. TAIR10
Match:
AT2G42920.1 (AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 252.3 bits (643), Expect = 5.4e-67
Identity = 121/331 (36.56%), Postives = 197/331 (59.52%), Query Frame = 1
Query: 95 LRANTINGLSEQALMLYKNMVCQG--IAADKFTFPFLIKACTVSFAINLGKVVHASLIKY 154
+R + + E A+ ++ +M+C + + T+P + KA G+ +H +IK
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 155 GFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISGLVFCGDVQEARRIF 214
G D+F++N ++ Y CG ++F M +VV+W +MI G CG + +A+ +F
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 215 DEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILS 274
DEMP +N VSW +MI+G++RN R ++AL++F+ MQ +++ P+ +TMVSL+ AC +G
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 275 LGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLG 334
GR IH+Y ++N FE+ + TALIDMY KCG I++ + VFE P++ L WNSMI L
Sbjct: 276 QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLA 335
Query: 335 VHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCAYFKRMTQHYGIAPIP 394
+G + A++LFSE+ER ++PD+++F+GVL AC H V +F+ M + Y I P
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSI 395
Query: 395 EHCKCMAELYARSNSLDEAFKSTEAMSMEPD 424
+H M + + L+EA + M +E D
Sbjct: 396 KHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426
BLAST of Lsi05G004470 vs. TAIR10
Match:
AT4G37380.1 (AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 251.1 bits (640), Expect = 1.2e-66
Identity = 129/337 (38.28%), Postives = 201/337 (59.64%), Query Frame = 1
Query: 89 FSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSFAINLGKVVHAS 148
F +++ +INGL +QA +LY ++ I ++FTF L+K+C+ GK++H
Sbjct: 96 FLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTH 155
Query: 149 LIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISGLVFCGDVQEA 208
++K+G D +V L+D Y K G KVF++M ++VS T MI+ G+V+ A
Sbjct: 156 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 215
Query: 209 RRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENIC-PNEYTMVSLIKACTE 268
R +FD M +++VSW MI+GY ++ P +AL LF+++ AE P+E T+V+ + AC++
Sbjct: 216 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 275
Query: 269 MGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSM 328
+G L GR IH + + + V + T LIDMYSKCGS+++A+ VF PR+ + WN+M
Sbjct: 276 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 335
Query: 329 ITSLGVHGLGQEALNLFSEMERI-NVKPDAITFVGVLCACVHMKNVKAGCAYFKRMTQHY 388
I +HG Q+AL LF+EM+ I ++P ITF+G L AC H V G F+ M Q Y
Sbjct: 336 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEY 395
Query: 389 GIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPD 424
GI P EH C+ L R+ L A+++ + M+M+ D
Sbjct: 396 GIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
BLAST of Lsi05G004470 vs. TAIR10
Match:
AT3G62890.1 (AT3G62890.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 249.6 bits (636), Expect = 3.5e-66
Identity = 125/352 (35.51%), Postives = 204/352 (57.95%), Query Frame = 1
Query: 79 RNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSFA 138
R++++ FL + ++ N + + +Y M ++ D TFPFL+ +
Sbjct: 18 RHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLH 77
Query: 139 INLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISG 198
+ LG+ HA ++ +G D FV+ +L++ Y CG +VF+ ++ +W ++++
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 199 LVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAEN-----ICP 258
G + +AR++FDEMP +NV+SW+ +INGY+ + +EAL+LF+ MQ + P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 259 NEYTMVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVF 318
NE+TM +++ AC +G L G+ +H Y K EI + LGTALIDMY+KCGS++ A VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 319 ETM-PRRSLPTWNSMITSLGVHGLGQEALNLFSEMERI-NVKPDAITFVGVLCACVHMKN 378
+ ++ + +++MI L ++GL E LFSEM N+ P+++TFVG+L ACVH
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 379 VKAGCAYFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSMEPD 424
+ G +YFK M + +GI P +H CM +LY RS + EA +M MEPD
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD 369
BLAST of Lsi05G004470 vs. NCBI nr
Match:
gi|659098190|ref|XP_008450020.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Cucumis melo])
HSP 1 Score: 622.1 bits (1603), Expect = 7.4e-175
Identity = 297/329 (90.27%), Postives = 314/329 (95.44%), Query Frame = 1
Query: 95 LRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSFAINLGKVVHASLIKYGF 154
+RANTINGLSEQALMLYKNMVCQGIAADKFTFPF+IKACT +I+LGKVVH S IKYGF
Sbjct: 97 IRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSSIKYGF 156
Query: 155 SGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISGLVFCGDVQEARRIFDE 214
SGD FVQNNLIDFYFKCGHKHC LKVFEKMRVCNVVSWTT+ISGL+ CGD+ EARRIFDE
Sbjct: 157 SGDAFVQNNLIDFYFKCGHKHCALKVFEKMRVCNVVSWTTVISGLISCGDLLEARRIFDE 216
Query: 215 MPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLG 274
MPSKNVVSWTAMINGYIRNQ+PEEALELFKRMQAENI PNEYTMVSLIKACTEMGILSLG
Sbjct: 217 MPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLG 276
Query: 275 RGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVH 334
RGIHDY IKN FEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVH
Sbjct: 277 RGIHDYTIKNCFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVH 336
Query: 335 GLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCAYFKRMTQHYGIAPIPEH 394
GLGQ+ALN+FSEMER+NV+PDAITFVGVLCACVHMKNVK GCAYFKRMTQHYGIAPIPEH
Sbjct: 337 GLGQQALNIFSEMERVNVEPDAITFVGVLCACVHMKNVKEGCAYFKRMTQHYGIAPIPEH 396
Query: 395 CKCMAELYARSNSLDEAFKSTEAMSMEPD 424
+CM ELYARSN+LDEAFKST+A+S+EPD
Sbjct: 397 YECMTELYARSNNLDEAFKSTKAISVEPD 425
BLAST of Lsi05G004470 vs. NCBI nr
Match:
gi|778681826|ref|XP_011651588.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Cucumis sativus])
HSP 1 Score: 607.4 bits (1565), Expect = 1.9e-170
Identity = 292/329 (88.75%), Postives = 311/329 (94.53%), Query Frame = 1
Query: 95 LRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSFAINLGKVVHASLIKYGF 154
+RANTINGLSEQALMLYKNMVCQGIAADKFTFPF+IKACT +I+LGKVVH SLIKYGF
Sbjct: 97 IRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF 156
Query: 155 SGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMISGLVFCGDVQEARRIFDE 214
SGD FVQNNLIDFYFKCGH LKVFEKMRV NVVSWTT+ISGL+ CGD+QEARRIFDE
Sbjct: 157 SGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDE 216
Query: 215 MPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLG 274
+PSKNVVSWTAMINGYIRNQ+PEEALELFKRMQAENI PNEYTMVSLIKACTEMGIL+LG
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 275 RGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVH 334
RGIHDYAIKN EIGVYLGTALIDMYSKCGSIKDAIEVFETMPR+SLPTWNSMITSLGVH
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336
Query: 335 GLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCAYFKRMTQHYGIAPIPEH 394
GLGQEALNLFSEMER+NVKPDAITF+GVLCACVH+KNVK GCAYF RMTQHYGIAPIPEH
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396
Query: 395 CKCMAELYARSNSLDEAFKSTEAMSMEPD 424
+CM ELYARSN+LDEAFKST+A+S+EPD
Sbjct: 397 YECMTELYARSNNLDEAFKSTKAISIEPD 425
BLAST of Lsi05G004470 vs. NCBI nr
Match:
gi|700203113|gb|KGN58246.1| (hypothetical protein Csa_3G598920 [Cucumis sativus])
HSP 1 Score: 582.8 bits (1501), Expect = 5.0e-163
Identity = 279/315 (88.57%), Postives = 297/315 (94.29%), Query Frame = 1
Query: 109 MLYKNMVCQGIAADKFTFPFLIKACTVSFAINLGKVVHASLIKYGFSGDTFVQNNLIDFY 168
MLYKNMVCQGIAADKFTFPF+IKACT +I+LGKVVH SLIKYGFSGD FVQNNLIDFY
Sbjct: 1 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 60
Query: 169 FKCGHKHCGLKVFEKMRVCNVVSWTTMISGLVFCGDVQEARRIFDEMPSKNVVSWTAMIN 228
FKCGH LKVFEKMRV NVVSWTT+ISGL+ CGD+QEARRIFDE+PSKNVVSWTAMIN
Sbjct: 61 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 120
Query: 229 GYIRNQRPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAIKNSFEI 288
GYIRNQ+PEEALELFKRMQAENI PNEYTMVSLIKACTEMGIL+LGRGIHDYAIKN EI
Sbjct: 121 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI 180
Query: 289 GVYLGTALIDMYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVHGLGQEALNLFSEME 348
GVYLGTALIDMYSKCGSIKDAIEVFETMPR+SLPTWNSMITSLGVHGLGQEALNLFSEME
Sbjct: 181 GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEME 240
Query: 349 RINVKPDAITFVGVLCACVHMKNVKAGCAYFKRMTQHYGIAPIPEHCKCMAELYARSNSL 408
R+NVKPDAITF+GVLCACVH+KNVK GCAYF RMTQHYGIAPIPEH +CM ELYARSN+L
Sbjct: 241 RVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNL 300
Query: 409 DEAFKSTEAMSMEPD 424
DEAFKST+A+S+EPD
Sbjct: 301 DEAFKSTKAISIEPD 315
BLAST of Lsi05G004470 vs. NCBI nr
Match:
gi|645250430|ref|XP_008231210.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Prunus mume])
HSP 1 Score: 444.5 bits (1142), Expect = 2.1e-121
Identity = 212/344 (61.63%), Postives = 265/344 (77.03%), Query Frame = 1
Query: 78 FRNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSF 137
F ++ P L+F+ + + TING S++AL+LY M+ QG DKFTFPF+IKAC S
Sbjct: 84 FHQIQGP--LTFTWNLMIMSYTINGCSQEALLLYSLMIRQGFPPDKFTFPFVIKACIASS 143
Query: 138 AINLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMIS 197
A GKVVH IK FS D FVQN L+DFYFKCG CG +VFEKMRV NVVSWTTMIS
Sbjct: 144 AFEQGKVVHGLSIKNSFSRDMFVQNTLMDFYFKCGEIDCGCRVFEKMRVRNVVSWTTMIS 203
Query: 198 GLVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYT 257
GLV CG++ AR +F+ MP+KNVVSWTAM+NGY+RNQ+PEEA ELF RMQ + PNE+T
Sbjct: 204 GLVACGELHAARAVFERMPAKNVVSWTAMMNGYVRNQQPEEAFELFWRMQVGGVRPNEFT 263
Query: 258 MVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 317
+VSL+KACT++G L LGR IHD+A+KN F++ V+LGTALID YSKCGS++DA VF+ M
Sbjct: 264 LVSLLKACTQLGSLKLGRWIHDFALKNGFKLDVFLGTALIDTYSKCGSLEDARRVFDEMR 323
Query: 318 RRSLPTWNSMITSLGVHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCA 377
+SL TWN+MITSLGVHG G+EAL LF+EME++NV+PDAITFVGVL AC+H N++AGC
Sbjct: 324 IKSLATWNAMITSLGVHGFGEEALALFAEMEKLNVRPDAITFVGVLSACLHTNNLEAGCR 383
Query: 378 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAMSME 422
YFK M++HYGI PI EH CM ELY R++ LDE K ++M ++
Sbjct: 384 YFKYMSKHYGITPILEHYTCMIELYGRADMLDEVRKLVQSMPVK 425
BLAST of Lsi05G004470 vs. NCBI nr
Match:
gi|595965687|ref|XP_007217099.1| (hypothetical protein PRUPE_ppa022877mg, partial [Prunus persica])
HSP 1 Score: 444.1 bits (1141), Expect = 2.8e-121
Identity = 212/341 (62.17%), Postives = 264/341 (77.42%), Query Frame = 1
Query: 78 FRNVRMPQFLSFSCLSSLRANTINGLSEQALMLYKNMVCQGIAADKFTFPFLIKACTVSF 137
F ++ P L+F+ + + TING S++AL+LY M+ QG DKFTFPF+IKAC S
Sbjct: 8 FHQIQGP--LTFTWNLMIMSYTINGCSQEALLLYSLMIHQGFPPDKFTFPFVIKACIASS 67
Query: 138 AINLGKVVHASLIKYGFSGDTFVQNNLIDFYFKCGHKHCGLKVFEKMRVCNVVSWTTMIS 197
A GKVVH IK FS D FVQN L+DFYFKCG CG +VFEKMRV NVVSWTTMIS
Sbjct: 68 AFEQGKVVHGLSIKNSFSRDMFVQNTLMDFYFKCGEIDCGCRVFEKMRVRNVVSWTTMIS 127
Query: 198 GLVFCGDVQEARRIFDEMPSKNVVSWTAMINGYIRNQRPEEALELFKRMQAENICPNEYT 257
GLV CG++ AR +F+ MP+KNVVSWTAM+NGY+RNQ+PEEA ELF RMQ ++ PNE+T
Sbjct: 128 GLVACGELHAARAVFERMPAKNVVSWTAMMNGYVRNQQPEEAFELFWRMQVGDVRPNEFT 187
Query: 258 MVSLIKACTEMGILSLGRGIHDYAIKNSFEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 317
+VSL+KACT +G L LGR IHD+A+KN F++ V+LGTALID YSKCGS++DA VF+ M
Sbjct: 188 LVSLLKACTLLGSLKLGRWIHDFALKNGFKLDVFLGTALIDTYSKCGSLEDARRVFDEMR 247
Query: 318 RRSLPTWNSMITSLGVHGLGQEALNLFSEMERINVKPDAITFVGVLCACVHMKNVKAGCA 377
+SL TWN+MITSLGVHG G+EAL LF+EME++NV+PDAITFVGVL AC+H N++AGC
Sbjct: 248 IKSLATWNAMITSLGVHGFGEEALALFAEMEKVNVRPDAITFVGVLSACLHTNNLEAGCM 307
Query: 378 YFKRMTQHYGIAPIPEHCKCMAELYARSNSLDEAFKSTEAM 419
YFK M++HYGI PI EH CM ELY+R++ LDE K ++M
Sbjct: 308 YFKYMSKHYGITPILEHYTCMIELYSRADMLDEVCKLAQSM 346
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP257_ARATH | 7.1e-101 | 47.43 | Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... | [more] |
| PP367_ARATH | 2.3e-67 | 35.88 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN... | [more] |
| PP200_ARATH | 9.7e-66 | 36.56 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
| PP354_ARATH | 2.2e-65 | 38.28 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
| PP295_ARATH | 6.3e-65 | 35.51 | Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LDS1_CUCSA | 3.5e-163 | 88.57 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G598920 PE=4 SV=1 | [more] |
| M5X9V5_PRUPE | 1.9e-121 | 62.17 | Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022877mg PE=4 S... | [more] |
| V4W2D6_9ROSI | 1.9e-116 | 58.19 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018065mg PE=4 SV=1 | [more] |
| A0A067LBM9_JATCU | 7.1e-116 | 57.91 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26918 PE=4 SV=1 | [more] |
| B9RGS8_RICCO | 2.7e-115 | 57.34 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G26630.1 | 4.0e-102 | 47.43 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G06540.1 | 1.3e-68 | 35.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G42920.1 | 5.4e-67 | 36.56 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT4G37380.1 | 1.2e-66 | 38.28 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G62890.1 | 3.5e-66 | 35.51 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
