BLAST of Cp4.1LG03g06520 vs. Swiss-Prot
Match:
PP257_ARATH (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2 SV=1)
HSP 1 Score: 427.2 bits (1097), Expect = 2.4e-118
Identity = 212/402 (52.74%), Postives = 284/402 (70.65%), Query Frame = 1
Query: 73 KALFLLQNCKNFKHLRQIHAKIIRSAISNDQLLTRKLIHLYSSHGRIAYAIFLFHQIQNP 132
+A + L+ C NF L+QIH KII+ ++NDQLL R+LI + SS G YA +F+Q+Q+P
Sbjct: 22 EASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 133 CTFTWNLIIRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVI 192
TFTWNL+IR+ ++N +AL+L+ M+ DKFTFPFVIKAC S +I +G +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 193 HASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDV 252
H IK GF D F QN L+D YFKCG KVF+KM ++VSWTTM+ GLVS +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 253 QAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKAC 312
+A +F++MP +NVVSWTAMI Y++N+ P+EA +LF+RMQ +++ PNE+T+V+L++A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 313 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 372
T++G LS+GR +HDYA NGF + +LGTALIDMYSKCGS++DA +VF M GKSL TWN
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 373 SMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQ 432
SMITSLGVHG G+EAL+LF EM E +V+PDAITFVGVL AC + NV+ G YF RM Q
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 433 HYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGS 469
YGI+PI EH CM +L + ++A ++M +PD S
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNS 423
BLAST of Cp4.1LG03g06520 vs. Swiss-Prot
Match:
PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 285.0 bits (728), Expect = 1.5e-75
Identity = 150/420 (35.71%), Postives = 238/420 (56.67%), Query Frame = 1
Query: 75 LFLLQNCKNFKHLRQIHAKIIRSAISNDQLLTRKLIHLYSSHGR-------IAYAIFLFH 134
L LLQ+C +F L+ IH ++R+ + +D + +L+ L + YA +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 135 QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDI 194
QIQNP F +NL+IR + +A Y M+ I D TFPF+IKA + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 195 GRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVS 254
G H+ ++++GF D +V+N+L+ Y CG A ++F +M +VVSWT+M++G
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 255 CGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSL 314
CG V+ AR +FDEMP +N+ +W+ MINGY +N E+A++LF+ M+ E + NE MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 315 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 374
I +C +G L G ++Y + + + + LGTAL+DM+ +CG I+ AI VF+ +P
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 375 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKR 434
+W+S+I L VHG +A++ FS+M + P +TF VL AC H VE G ++
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 435 MAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGSL-ALLGVIENADGTD 483
M + +GI P EHY C+ ++ R EA M ++P++ L ALLG + T+
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTE 435
BLAST of Cp4.1LG03g06520 vs. Swiss-Prot
Match:
PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1)
HSP 1 Score: 283.9 bits (725), Expect = 3.3e-75
Identity = 155/404 (38.37%), Postives = 238/404 (58.91%), Query Frame = 1
Query: 72 KKALFLLQNCKNFKHLRQIHAKIIRSAI---SNDQLLTRKLIHLYSSHGRIAYAIFLFHQ 131
+K L+ ++ + QIHA I+R + +L KL Y+SHG+I +++ LFHQ
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 132 IQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIG 191
+P F + I +INGL +QA +LY ++ I ++FTF ++K+C+T G
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----G 149
Query: 192 RVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSC 251
++IH ++K+G D +V L+D Y K G A KVF++M ++VS T MI+
Sbjct: 150 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 209
Query: 252 GDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENIC-PNEYTMVSL 311
G+V+AAR +FD M +++VSW MI+GY ++ P +AL LF+++ AE P+E T+V+
Sbjct: 210 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 269
Query: 312 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 371
+ AC+++G L GR IH + ++ + V + T LIDMYSKCGS+++A+ VF P K +
Sbjct: 270 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 329
Query: 372 PTWNSMITSLGVHGLGQEALNLFSEMERV-NVKPDAITFVGVLCACVHMKNVEAGCAYFK 431
WN+MI +HG Q+AL LF+EM+ + ++P ITF+G L AC H V G F+
Sbjct: 330 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 389
Query: 432 RMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDS 467
M Q YGI P EHY C+ L R A+E+ K M+M+ DS
Sbjct: 390 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
BLAST of Cp4.1LG03g06520 vs. Swiss-Prot
Match:
PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 282.7 bits (722), Expect = 7.4e-75
Identity = 153/434 (35.25%), Postives = 240/434 (55.30%), Query Frame = 1
Query: 40 SFSCIMVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAI 99
SFS + VP + S+ + T L L C + L+QIHA +I++ +
Sbjct: 7 SFSGVTVPAMPSSGSLSGNTYLRLIDT-------------QCSTMRELKQIHASLIKTGL 66
Query: 100 SNDQLL-TRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYK 159
+D + +R L +S + YA +F +I + F WN IIR + + E A+ ++
Sbjct: 67 ISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFI 126
Query: 160 NMVCQG--IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFK 219
+M+C + + T+P V KA GR +H +IK G D+F++N ++ Y
Sbjct: 127 DMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVT 186
Query: 220 CGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGY 279
CG A ++F M +VV+W +MI G CG + A+ +FDEMP +N VSW +MI+G+
Sbjct: 187 CGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGF 246
Query: 280 IRNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGV 339
+RN ++AL++F+ MQ +++ P+ +TMVSL+ AC +G GR IH+Y + N FE+
Sbjct: 247 VRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNS 306
Query: 340 YLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERV 399
+ TALIDMY KCG I++ + VF+ P K L WNSMI L +G + A++LFSE+ER
Sbjct: 307 IVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERS 366
Query: 400 NVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA----RDE 459
++PD+++F+GVL AC H V +F+ M + Y I P +HY M + +E
Sbjct: 367 GLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEE 426
Query: 460 AFESTKAMSMEPDS 467
A K M +E D+
Sbjct: 427 AEALIKNMPVEEDT 427
BLAST of Cp4.1LG03g06520 vs. Swiss-Prot
Match:
PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 277.3 bits (708), Expect = 3.1e-73
Identity = 150/394 (38.07%), Postives = 225/394 (57.11%), Query Frame = 1
Query: 78 LQNCKNFKHLRQIHAKIIRSAISNDQLLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTW 137
LQ K+ ++I+A II +S + K++ + YA LF+Q+ NP F +
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 138 NLIIRANTINGLSEQALMLYKNMVCQGIAA-DKFTFPFVIKACTTSFAIDIGRVIHASLI 197
N IIRA T N L + +YK ++ + D+FTFPF+ K+C + + +G+ +H L
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 198 KYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARR 257
K+G +N LID Y K A KVF++M +V+SW +++SG G ++ A+
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 258 IFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGI 317
+F M K +VSWTAMI+GY EA++ F+ MQ I P+E +++S++ +C ++G
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 318 LSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITS 377
L LG+ IH YA GF + ALI+MYSKCG I AI++F M GK + +W++MI+
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 378 LGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAP 437
HG A+ F+EM+R VKP+ ITF+G+L AC H+ + G YF M Q Y I P
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 438 IPEHYKCMAELYAR----DEAFESTKAMSMEPDS 467
EHY C+ ++ AR + A E TK M M+PDS
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDS 410
BLAST of Cp4.1LG03g06520 vs. TrEMBL
Match:
A0A0A0LDS1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G598920 PE=4 SV=1)
HSP 1 Score: 567.8 bits (1462), Expect = 1.3e-158
Identity = 274/315 (86.98%), Postives = 291/315 (92.38%), Query Frame = 1
Query: 155 MLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFY 214
MLYKNMVCQGIAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFY
Sbjct: 1 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 60
Query: 215 FKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMIN 274
FKCGH R ALKVFEKMRV NVVSWTT+ISGL+SCGD+Q ARRIFDE+P KNVVSWTAMIN
Sbjct: 61 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 120
Query: 275 GYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEI 334
GYIRNQ PEEALELFKRMQAENI PNEYTMVSLIKACTEMGIL+LGRGIHDYAI N EI
Sbjct: 121 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI 180
Query: 335 GVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEME 394
GVYLGTALIDMYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEME
Sbjct: 181 GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEME 240
Query: 395 RVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR---- 454
RVNVKPDAITF+GVLCACVH+KNV+ GCAYF RM QHYGIAPIPEHY+CM ELYAR
Sbjct: 241 RVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNL 300
Query: 455 DEAFESTKAMSMEPD 466
DEAF+STKA+S+EPD
Sbjct: 301 DEAFKSTKAISIEPD 315
BLAST of Cp4.1LG03g06520 vs. TrEMBL
Match:
A0A067LBM9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26918 PE=4 SV=1)
HSP 1 Score: 523.9 bits (1348), Expect = 2.1e-145
Identity = 261/439 (59.45%), Postives = 318/439 (72.44%), Query Frame = 1
Query: 45 MVPCLSSTHDVFATTNLLLSSR-------GNIGAKKALFLLQNCKNFKHLRQIHAKIIRS 104
MV CLS + +TT LSS+ G+++AL + QNC NF HL+ +HAKIIR+
Sbjct: 1 MVACLSCAANTLSTTTPFLSSQIQSHSNNPKFGSQEALIVFQNCSNFTHLKLVHAKIIRN 60
Query: 105 AISNDQLLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLY 164
+SNDQLL RKL+HL +G I YA LFHQIQNP TFTWN +IRA T NG S++AL LY
Sbjct: 61 GLSNDQLLVRKLLHLCFCYGEIDYATLLFHQIQNPHTFTWNFMIRAYTKNGNSQEALFLY 120
Query: 165 KNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKC 224
M+C+G DKFTFPFV+KAC +S A+D G+ IH IK GF DTF+ N L+D YFKC
Sbjct: 121 NLMICRGFPPDKFTFPFVVKACLSSSALDKGKEIHGFAIKTGFWKDTFLHNTLMDLYFKC 180
Query: 225 GHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYI 284
G K+F+KMRV +VVSWTT ++GLV+ G++ AAR+ FDEMP KNVVSWTAMINGY+
Sbjct: 181 GDFDYGRKLFDKMRVRSVVSWTTFVAGLVASGELDAARKAFDEMPMKNVVSWTAMINGYV 240
Query: 285 RNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVY 344
+NQ +EA ELF RMQ +N+ PNE+T+V L+KACTE+G L LG IH+YA+ NGF++GV+
Sbjct: 241 KNQRAQEAFELFWRMQLDNVRPNEFTLVGLLKACTELGSLQLGSWIHEYALKNGFKLGVF 300
Query: 345 LGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVN 404
LGTALIDMYSKCGS++DA +VF M KSL TWNSMITSLGVHG G+EAL LF+ ME N
Sbjct: 301 LGTALIDMYSKCGSLEDAKQVFDKMEIKSLATWNSMITSLGVHGFGKEALALFARMEEAN 360
Query: 405 VKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEA 464
V+PDAITFVGVLCACVH NVE G YFK M + YGI P+ EHY CM ELY R DE
Sbjct: 361 VQPDAITFVGVLCACVHTINVEEGIRYFKYMTECYGIMPVLEHYTCMIELYTRANMLDEV 420
Query: 465 FESTKAMSMEPDSGSLALL 473
E +M +E S A L
Sbjct: 421 RELINSMPVELSSSPAAAL 439
BLAST of Cp4.1LG03g06520 vs. TrEMBL
Match:
V4W2D6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018065mg PE=4 SV=1)
HSP 1 Score: 506.5 bits (1303), Expect = 3.5e-140
Identity = 254/424 (59.91%), Postives = 309/424 (72.88%), Query Frame = 1
Query: 45 MVPCLSSTHDVFATTNLLLSS---RGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISN 104
MV CLS T D LL+S R G ++AL LL+ C+NF L+ IHAKIIR +SN
Sbjct: 1 MVVCLSYTPDPLTHKTPLLNSSITRLKFGYQEALVLLRKCRNFGQLKLIHAKIIRHGLSN 60
Query: 105 DQLLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMV 164
DQLL RKL+ L S +G+ +A+ +F QIQ P FTWNL+IRA TING S QAL+LY M+
Sbjct: 61 DQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHVFTWNLMIRALTINGSSRQALLLYNLMI 120
Query: 165 CQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKR 224
C G DKFTFPFV KAC TS AI+ G+ +H +K GFS D FVQN L+D YFKCG
Sbjct: 121 CNGFRPDKFTFPFVFKACITSLAIEKGKEVHGLAVKAGFSRDMFVQNTLMDLYFKCGDVN 180
Query: 225 CALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQN 284
KVF+KMRV +VVSWTTMISGL + GD+ AARR+F++M +NVVSWTAMIN Y+RN+
Sbjct: 181 GGRKVFDKMRVRSVVSWTTMISGLAASGDLDAARRVFEQMQTRNVVSWTAMINAYVRNER 240
Query: 285 PEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTA 344
EA ELF+RM +N+ PNE+T+VSL++ACTE+G L LG IHD+A+ NGF +GVYLGTA
Sbjct: 241 AHEAFELFQRMLLDNVRPNEFTLVSLLQACTELGSLKLGNWIHDFALKNGFVLGVYLGTA 300
Query: 345 LIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPD 404
LIDMYSKCGS++DA +VF M K+L TWNSMITSLGVHG G+EAL LF++ME NV+PD
Sbjct: 301 LIDMYSKCGSLEDARKVFDKMEIKNLATWNSMITSLGVHGHGEEALALFAQMENANVQPD 360
Query: 405 AITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFEST 462
AITFVGVLCACVH NV G YF+ M +HYGI+PI EHY C+ ELY R DE E
Sbjct: 361 AITFVGVLCACVHTNNVNEGYRYFRYMREHYGISPIEEHYTCLIELYNRAKMKDEVSEEL 420
BLAST of Cp4.1LG03g06520 vs. TrEMBL
Match:
B9RGS8_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1443630 PE=4 SV=1)
HSP 1 Score: 500.0 bits (1286), Expect = 3.3e-138
Identity = 249/437 (56.98%), Postives = 318/437 (72.77%), Query Frame = 1
Query: 45 MVPCLSST-----HDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAI 104
MV CLSS + + T+ +++ G+++AL LLQ NF H++ + AKIIR+ +
Sbjct: 1 MVACLSSAPVKNARFLNSHTHNHSNNKPKFGSQEALNLLQKGSNFTHVKLVQAKIIRNNL 60
Query: 105 SNDQLLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKN 164
S+DQLL RKL+ L S+ ++ YA +F QIQNP TFTWN +IRA NG S+QAL+LY
Sbjct: 61 SDDQLLVRKLLRLCFSYQKVDYATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNL 120
Query: 165 MVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGH 224
M+C+G + DKFTFPFVIKAC A+D G+ +H IK GF DTF+ N L+D YFKCG
Sbjct: 121 MICEGFSPDKFTFPFVIKACLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGD 180
Query: 225 KRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRN 284
A K+F+KM V +VVSWTT ++GLV+CG++ AR FDEMP +NVVSWTAMINGY++N
Sbjct: 181 LDYARKLFDKMAVRSVVSWTTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKN 240
Query: 285 QNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLG 344
Q P+EA ELF+RMQ N+ PN +T+V L++ACTE+G L LGR IH+YA+ NGF++GV+LG
Sbjct: 241 QRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSLELGRRIHEYALENGFKVGVFLG 300
Query: 345 TALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVK 404
TALIDMYSKCGSI+DA +VF+ M KSL TWNSMITSLGVHG G+EAL LF++ME NV+
Sbjct: 301 TALIDMYSKCGSIEDAKKVFEEMQKKSLATWNSMITSLGVHGFGKEALALFAQMEEANVR 360
Query: 405 PDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFE 464
PDAITFVGVL ACV+ NVEAG YFK M +HYGI P+ EHY CM ELY R +E E
Sbjct: 361 PDAITFVGVLFACVNTNNVEAGYRYFKYMTEHYGITPMLEHYTCMIELYTRAAMLNEVSE 420
Query: 465 STKAMSMEPDSGSLALL 473
+M M+ +S A L
Sbjct: 421 LVNSMPMKLNSNPAAAL 437
BLAST of Cp4.1LG03g06520 vs. TrEMBL
Match:
W9QX31_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007578 PE=4 SV=1)
HSP 1 Score: 476.5 bits (1225), Expect = 3.9e-131
Identity = 233/402 (57.96%), Postives = 292/402 (72.64%), Query Frame = 1
Query: 64 SSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISNDQLLTRKLIHLYSSHGRIAYAI 123
+S+ G+++A LQNC +F+ L+QIHAKIIRS +S+DQLL RK++ S+ G + YA
Sbjct: 15 TSKTKFGSEEAFTFLQNCTSFRQLKQIHAKIIRSGLSHDQLLLRKMLQFCSTSGNMDYAA 74
Query: 124 FLF-HQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTS 183
+F HQI P TFTWNL+IRA T+N QAL+L+ M +G DKFTFPFVIKACT S
Sbjct: 75 LVFRHQIPYPLTFTWNLMIRAYTLNASPRQALLLFTLMTSRGFPPDKFTFPFVIKACTAS 134
Query: 184 FAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMI 243
A G +H IK FSGD FVQN L+DFYFKCG KVF+KMRV N+VSWTTM+
Sbjct: 135 SAFRPGDAVHGLAIKARFSGDIFVQNTLMDFYFKCGDAHSGRKVFDKMRVRNLVSWTTMV 194
Query: 244 SGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEY 303
+GLV GD++AAR IF++MP KNVVSWT MI+GY+ ++ PEEA +LF+RMQ +N+ PNE+
Sbjct: 195 TGLVGSGDLRAARAIFEQMPAKNVVSWTIMIDGYVEDRQPEEAFKLFRRMQLDNVSPNEF 254
Query: 304 TMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTM 363
T+VSL+KACTE+G L LGR +HD+A+ NGFE+ V+ GTALID YSKCGS++DA VF M
Sbjct: 255 TLVSLLKACTELGSLKLGRWVHDFALKNGFELDVFFGTALIDTYSKCGSLEDARRVFDKM 314
Query: 364 PGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGC 423
KS+ TWNSMITSLGVHG G+EAL LF+EMER NV+PD ITFVG+L AC+ +V
Sbjct: 315 QAKSIATWNSMITSLGVHGFGEEALALFAEMERQNVRPDEITFVGILSACLQKNSVSDCR 374
Query: 424 AYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAM 461
YF+ M + Y I PI EHY CM ELY+R DE AM
Sbjct: 375 KYFEYMNKRYRILPIKEHYICMIELYSRAGMLDEVVRLVNAM 416
BLAST of Cp4.1LG03g06520 vs. TAIR10
Match:
AT3G26630.1 (AT3G26630.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 427.2 bits (1097), Expect = 1.4e-119
Identity = 212/402 (52.74%), Postives = 284/402 (70.65%), Query Frame = 1
Query: 73 KALFLLQNCKNFKHLRQIHAKIIRSAISNDQLLTRKLIHLYSSHGRIAYAIFLFHQIQNP 132
+A + L+ C NF L+QIH KII+ ++NDQLL R+LI + SS G YA +F+Q+Q+P
Sbjct: 22 EASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 133 CTFTWNLIIRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVI 192
TFTWNL+IR+ ++N +AL+L+ M+ DKFTFPFVIKAC S +I +G +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 193 HASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDV 252
H IK GF D F QN L+D YFKCG KVF+KM ++VSWTTM+ GLVS +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 253 QAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKAC 312
+A +F++MP +NVVSWTAMI Y++N+ P+EA +LF+RMQ +++ PNE+T+V+L++A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 313 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 372
T++G LS+GR +HDYA NGF + +LGTALIDMYSKCGS++DA +VF M GKSL TWN
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 373 SMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQ 432
SMITSLGVHG G+EAL+LF EM E +V+PDAITFVGVL AC + NV+ G YF RM Q
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 433 HYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGS 469
YGI+PI EH CM +L + ++A ++M +PD S
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNS 423
BLAST of Cp4.1LG03g06520 vs. TAIR10
Match:
AT5G06540.1 (AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 285.0 bits (728), Expect = 8.4e-77
Identity = 150/420 (35.71%), Postives = 238/420 (56.67%), Query Frame = 1
Query: 75 LFLLQNCKNFKHLRQIHAKIIRSAISNDQLLTRKLIHLYSSHGR-------IAYAIFLFH 134
L LLQ+C +F L+ IH ++R+ + +D + +L+ L + YA +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 135 QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDI 194
QIQNP F +NL+IR + +A Y M+ I D TFPF+IKA + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 195 GRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVS 254
G H+ ++++GF D +V+N+L+ Y CG A ++F +M +VVSWT+M++G
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 255 CGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSL 314
CG V+ AR +FDEMP +N+ +W+ MINGY +N E+A++LF+ M+ E + NE MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 315 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 374
I +C +G L G ++Y + + + + LGTAL+DM+ +CG I+ AI VF+ +P
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 375 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKR 434
+W+S+I L VHG +A++ FS+M + P +TF VL AC H VE G ++
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 435 MAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGSL-ALLGVIENADGTD 483
M + +GI P EHY C+ ++ R EA M ++P++ L ALLG + T+
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTE 435
BLAST of Cp4.1LG03g06520 vs. TAIR10
Match:
AT4G37380.1 (AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 283.9 bits (725), Expect = 1.9e-76
Identity = 155/404 (38.37%), Postives = 238/404 (58.91%), Query Frame = 1
Query: 72 KKALFLLQNCKNFKHLRQIHAKIIRSAI---SNDQLLTRKLIHLYSSHGRIAYAIFLFHQ 131
+K L+ ++ + QIHA I+R + +L KL Y+SHG+I +++ LFHQ
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 132 IQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIG 191
+P F + I +INGL +QA +LY ++ I ++FTF ++K+C+T G
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----G 149
Query: 192 RVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSC 251
++IH ++K+G D +V L+D Y K G A KVF++M ++VS T MI+
Sbjct: 150 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 209
Query: 252 GDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENIC-PNEYTMVSL 311
G+V+AAR +FD M +++VSW MI+GY ++ P +AL LF+++ AE P+E T+V+
Sbjct: 210 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 269
Query: 312 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 371
+ AC+++G L GR IH + ++ + V + T LIDMYSKCGS+++A+ VF P K +
Sbjct: 270 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 329
Query: 372 PTWNSMITSLGVHGLGQEALNLFSEMERV-NVKPDAITFVGVLCACVHMKNVEAGCAYFK 431
WN+MI +HG Q+AL LF+EM+ + ++P ITF+G L AC H V G F+
Sbjct: 330 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 389
Query: 432 RMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDS 467
M Q YGI P EHY C+ L R A+E+ K M+M+ DS
Sbjct: 390 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
BLAST of Cp4.1LG03g06520 vs. TAIR10
Match:
AT2G42920.1 (AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 282.7 bits (722), Expect = 4.2e-76
Identity = 153/434 (35.25%), Postives = 240/434 (55.30%), Query Frame = 1
Query: 40 SFSCIMVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAI 99
SFS + VP + S+ + T L L C + L+QIHA +I++ +
Sbjct: 7 SFSGVTVPAMPSSGSLSGNTYLRLIDT-------------QCSTMRELKQIHASLIKTGL 66
Query: 100 SNDQLL-TRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYK 159
+D + +R L +S + YA +F +I + F WN IIR + + E A+ ++
Sbjct: 67 ISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFI 126
Query: 160 NMVCQG--IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFK 219
+M+C + + T+P V KA GR +H +IK G D+F++N ++ Y
Sbjct: 127 DMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVT 186
Query: 220 CGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGY 279
CG A ++F M +VV+W +MI G CG + A+ +FDEMP +N VSW +MI+G+
Sbjct: 187 CGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGF 246
Query: 280 IRNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGV 339
+RN ++AL++F+ MQ +++ P+ +TMVSL+ AC +G GR IH+Y + N FE+
Sbjct: 247 VRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNS 306
Query: 340 YLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERV 399
+ TALIDMY KCG I++ + VF+ P K L WNSMI L +G + A++LFSE+ER
Sbjct: 307 IVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERS 366
Query: 400 NVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA----RDE 459
++PD+++F+GVL AC H V +F+ M + Y I P +HY M + +E
Sbjct: 367 GLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEE 426
Query: 460 AFESTKAMSMEPDS 467
A K M +E D+
Sbjct: 427 AEALIKNMPVEEDT 427
BLAST of Cp4.1LG03g06520 vs. TAIR10
Match:
AT2G20540.1 (AT2G20540.1 mitochondrial editing factor 21)
HSP 1 Score: 277.3 bits (708), Expect = 1.8e-74
Identity = 150/394 (38.07%), Postives = 225/394 (57.11%), Query Frame = 1
Query: 78 LQNCKNFKHLRQIHAKIIRSAISNDQLLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTW 137
LQ K+ ++I+A II +S + K++ + YA LF+Q+ NP F +
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 138 NLIIRANTINGLSEQALMLYKNMVCQGIAA-DKFTFPFVIKACTTSFAIDIGRVIHASLI 197
N IIRA T N L + +YK ++ + D+FTFPF+ K+C + + +G+ +H L
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 198 KYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARR 257
K+G +N LID Y K A KVF++M +V+SW +++SG G ++ A+
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 258 IFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGI 317
+F M K +VSWTAMI+GY EA++ F+ MQ I P+E +++S++ +C ++G
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 318 LSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITS 377
L LG+ IH YA GF + ALI+MYSKCG I AI++F M GK + +W++MI+
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 378 LGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAP 437
HG A+ F+EM+R VKP+ ITF+G+L AC H+ + G YF M Q Y I P
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 438 IPEHYKCMAELYAR----DEAFESTKAMSMEPDS 467
EHY C+ ++ AR + A E TK M M+PDS
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDS 410
BLAST of Cp4.1LG03g06520 vs. NCBI nr
Match:
gi|659098190|ref|XP_008450020.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Cucumis melo])
HSP 1 Score: 765.4 bits (1975), Expect = 6.0e-218
Identity = 371/425 (87.29%), Postives = 393/425 (92.47%), Query Frame = 1
Query: 45 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISNDQL 104
MVPCLS THDVF + N L+ RGNI AKKALFLLQNCKNFKHLRQIHAKIIRS +SNDQL
Sbjct: 1 MVPCLSYTHDVFPSKNFSLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60
Query: 105 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 164
LTRKLIHLYS+HGRI YAIFLF+QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSTHGRIVYAIFLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 165 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 224
IAADKFTFPFVIKACT +ID+G+V+H S IKYGFSGD FVQNNLIDFYFKCGHK CAL
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSSIKYGFSGDAFVQNNLIDFYFKCGHKHCAL 180
Query: 225 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 284
KVFEKMRVCNVVSWTT+ISGL+SCGD+ ARRIFDEMP KNVVSWTAMINGYIRNQ PEE
Sbjct: 181 KVFEKMRVCNVVSWTTVISGLISCGDLLEARRIFDEMPSKNVVSWTAMINGYIRNQQPEE 240
Query: 285 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 344
ALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGIHDY I N FEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGIHDYTIKNCFEIGVYLGTALID 300
Query: 345 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 404
MYSKCGSIKDAIEVF+TMP +SLPTWNSMITSLGVHGLGQ+ALN+FSEMERVNV+PDAIT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVHGLGQQALNIFSEMERVNVEPDAIT 360
Query: 405 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAM 464
FVGVLCACVHMKNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYAR DEAF+STKA+
Sbjct: 361 FVGVLCACVHMKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 420
Query: 465 SMEPD 466
S+EPD
Sbjct: 421 SVEPD 425
BLAST of Cp4.1LG03g06520 vs. NCBI nr
Match:
gi|778681826|ref|XP_011651588.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Cucumis sativus])
HSP 1 Score: 757.7 bits (1955), Expect = 1.3e-215
Identity = 370/425 (87.06%), Postives = 393/425 (92.47%), Query Frame = 1
Query: 45 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISNDQL 104
MVPCLS THDVF + N+ L+ RGNI AKKALFLLQNCKNFKHLRQIHAKIIRS +SNDQL
Sbjct: 1 MVPCLSYTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60
Query: 105 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 164
LTRKLIHLYS+HGRIAYAI LF+QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 165 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 224
IAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFYFKCGH R AL
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFAL 180
Query: 225 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 284
KVFEKMRV NVVSWTT+ISGL+SCGD+Q ARRIFDE+P KNVVSWTAMINGYIRNQ PEE
Sbjct: 181 KVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEE 240
Query: 285 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 344
ALELFKRMQAENI PNEYTMVSLIKACTEMGIL+LGRGIHDYAI N EIGVYLGTALID
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALID 300
Query: 345 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 404
MYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 405 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAM 464
F+GVLCACVH+KNV+ GCAYF RM QHYGIAPIPEHY+CM ELYAR DEAF+STKA+
Sbjct: 361 FIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 420
Query: 465 SMEPD 466
S+EPD
Sbjct: 421 SIEPD 425
BLAST of Cp4.1LG03g06520 vs. NCBI nr
Match:
gi|700203113|gb|KGN58246.1| (hypothetical protein Csa_3G598920 [Cucumis sativus])
HSP 1 Score: 567.8 bits (1462), Expect = 1.9e-158
Identity = 274/315 (86.98%), Postives = 291/315 (92.38%), Query Frame = 1
Query: 155 MLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFY 214
MLYKNMVCQGIAADKFTFPFVIKACT +ID+G+V+H SLIKYGFSGD FVQNNLIDFY
Sbjct: 1 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 60
Query: 215 FKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMIN 274
FKCGH R ALKVFEKMRV NVVSWTT+ISGL+SCGD+Q ARRIFDE+P KNVVSWTAMIN
Sbjct: 61 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 120
Query: 275 GYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEI 334
GYIRNQ PEEALELFKRMQAENI PNEYTMVSLIKACTEMGIL+LGRGIHDYAI N EI
Sbjct: 121 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI 180
Query: 335 GVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEME 394
GVYLGTALIDMYSKCGSIKDAIEVF+TMP KSLPTWNSMITSLGVHGLGQEALNLFSEME
Sbjct: 181 GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEME 240
Query: 395 RVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR---- 454
RVNVKPDAITF+GVLCACVH+KNV+ GCAYF RM QHYGIAPIPEHY+CM ELYAR
Sbjct: 241 RVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNL 300
Query: 455 DEAFESTKAMSMEPD 466
DEAF+STKA+S+EPD
Sbjct: 301 DEAFKSTKAISIEPD 315
BLAST of Cp4.1LG03g06520 vs. NCBI nr
Match:
gi|645250430|ref|XP_008231210.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic [Prunus mume])
HSP 1 Score: 552.4 bits (1422), Expect = 8.0e-154
Identity = 266/418 (63.64%), Postives = 325/418 (77.75%), Query Frame = 1
Query: 44 IMVPCLSSTHDVFATTNLLLSSR-GNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISND 103
+MV CLS T +V +NL SSR G+++AL LLQNC FKHL+QIHAKIIR+ +S+D
Sbjct: 1 MMVACLSCTPEVLPKSNLFTSSRVTKFGSQEALTLLQNCATFKHLKQIHAKIIRNGLSHD 60
Query: 104 QLLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVC 163
QLL RKLIHL SS+G++ YA +FHQIQ P TFTWNL+I + TING S++AL+LY M+
Sbjct: 61 QLLIRKLIHLCSSYGKMDYATLIFHQIQGPLTFTWNLMIMSYTINGCSQEALLLYSLMIR 120
Query: 164 QGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRC 223
QG DKFTFPFVIKAC S A + G+V+H IK FS D FVQN L+DFYFKCG C
Sbjct: 121 QGFPPDKFTFPFVIKACIASSAFEQGKVVHGLSIKNSFSRDMFVQNTLMDFYFKCGEIDC 180
Query: 224 ALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNP 283
+VFEKMRV NVVSWTTMISGLV+CG++ AAR +F+ MP KNVVSWTAM+NGY+RNQ P
Sbjct: 181 GCRVFEKMRVRNVVSWTTMISGLVACGELHAARAVFERMPAKNVVSWTAMMNGYVRNQQP 240
Query: 284 EEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTAL 343
EEA ELF RMQ + PNE+T+VSL+KACT++G L LGR IHD+A+ NGF++ V+LGTAL
Sbjct: 241 EEAFELFWRMQVGGVRPNEFTLVSLLKACTQLGSLKLGRWIHDFALKNGFKLDVFLGTAL 300
Query: 344 IDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 403
ID YSKCGS++DA VF M KSL TWN+MITSLGVHG G+EAL LF+EME++NV+PDA
Sbjct: 301 IDTYSKCGSLEDARRVFDEMRIKSLATWNAMITSLGVHGFGEEALALFAEMEKLNVRPDA 360
Query: 404 ITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAM 461
ITFVGVL AC+H N+EAGC YFK M++HYGI PI EHY CM ELY R + + + +
Sbjct: 361 ITFVGVLSACLHTNNLEAGCRYFKYMSKHYGITPILEHYTCMIELYGRADMLDEVRKL 418
BLAST of Cp4.1LG03g06520 vs. NCBI nr
Match:
gi|802564925|ref|XP_012067416.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like [Jatropha curcas])
HSP 1 Score: 523.9 bits (1348), Expect = 3.1e-145
Identity = 261/439 (59.45%), Postives = 318/439 (72.44%), Query Frame = 1
Query: 45 MVPCLSSTHDVFATTNLLLSSR-------GNIGAKKALFLLQNCKNFKHLRQIHAKIIRS 104
MV CLS + +TT LSS+ G+++AL + QNC NF HL+ +HAKIIR+
Sbjct: 1 MVACLSCAANTLSTTTPFLSSQIQSHSNNPKFGSQEALIVFQNCSNFTHLKLVHAKIIRN 60
Query: 105 AISNDQLLTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLY 164
+SNDQLL RKL+HL +G I YA LFHQIQNP TFTWN +IRA T NG S++AL LY
Sbjct: 61 GLSNDQLLVRKLLHLCFCYGEIDYATLLFHQIQNPHTFTWNFMIRAYTKNGNSQEALFLY 120
Query: 165 KNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKC 224
M+C+G DKFTFPFV+KAC +S A+D G+ IH IK GF DTF+ N L+D YFKC
Sbjct: 121 NLMICRGFPPDKFTFPFVVKACLSSSALDKGKEIHGFAIKTGFWKDTFLHNTLMDLYFKC 180
Query: 225 GHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYI 284
G K+F+KMRV +VVSWTT ++GLV+ G++ AAR+ FDEMP KNVVSWTAMINGY+
Sbjct: 181 GDFDYGRKLFDKMRVRSVVSWTTFVAGLVASGELDAARKAFDEMPMKNVVSWTAMINGYV 240
Query: 285 RNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVY 344
+NQ +EA ELF RMQ +N+ PNE+T+V L+KACTE+G L LG IH+YA+ NGF++GV+
Sbjct: 241 KNQRAQEAFELFWRMQLDNVRPNEFTLVGLLKACTELGSLQLGSWIHEYALKNGFKLGVF 300
Query: 345 LGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVN 404
LGTALIDMYSKCGS++DA +VF M KSL TWNSMITSLGVHG G+EAL LF+ ME N
Sbjct: 301 LGTALIDMYSKCGSLEDAKQVFDKMEIKSLATWNSMITSLGVHGFGKEALALFARMEEAN 360
Query: 405 VKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEA 464
V+PDAITFVGVLCACVH NVE G YFK M + YGI P+ EHY CM ELY R DE
Sbjct: 361 VQPDAITFVGVLCACVHTINVEEGIRYFKYMTECYGIMPVLEHYTCMIELYTRANMLDEV 420
Query: 465 FESTKAMSMEPDSGSLALL 473
E +M +E S A L
Sbjct: 421 RELINSMPVELSSSPAAAL 439
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP257_ARATH | 2.4e-118 | 52.74 | Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... | [more] |
| PP367_ARATH | 1.5e-75 | 35.71 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN... | [more] |
| PP354_ARATH | 3.3e-75 | 38.37 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
| PP200_ARATH | 7.4e-75 | 35.25 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
| PP165_ARATH | 3.1e-73 | 38.07 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LDS1_CUCSA | 1.3e-158 | 86.98 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G598920 PE=4 SV=1 | [more] |
| A0A067LBM9_JATCU | 2.1e-145 | 59.45 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26918 PE=4 SV=1 | [more] |
| V4W2D6_9ROSI | 3.5e-140 | 59.91 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018065mg PE=4 SV=1 | [more] |
| B9RGS8_RICCO | 3.3e-138 | 56.98 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| W9QX31_9ROSA | 3.9e-131 | 57.96 | Uncharacterized protein OS=Morus notabilis GN=L484_007578 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G26630.1 | 1.4e-119 | 52.74 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G06540.1 | 8.4e-77 | 35.71 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G37380.1 | 1.9e-76 | 38.37 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G42920.1 | 4.2e-76 | 35.25 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT2G20540.1 | 1.8e-74 | 38.07 | mitochondrial editing factor 21 | [more] |
