Lsi05G002920 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Glutamyl-tRNA (Gln) amidotransferase subunit C, mitochondrial
Location	chr05 : 3747877 .. 3750720 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATGGTGTTTATTATGAAGTTTAGAGTTATGTTGTTGATTGTTTGTGGTAGCACTATTTGGTCATAGACTAATTTGTTGTGGGCACCATCTGTTTGTTAAAAGTCCTGAAAGAAGCTGTTCTTGGGCATTTGTAGAATTTTCATTTCTGGCTTCAGTAGTTTTGGGTTGGTCATCATTGAAGTCTTGGCTGACTGTTCATGTTGTTACAGAGTTCTGCTGTTGCTCTTTATTTGTTTGGGATTTTTTGTCTTTTGCTTGCCAATGAAAGTTGGTTTTGTGTTAAATGGGATGACTTACTAGATTTCTTGTTTATCGATGATAATAATTTGTCTATTTTCTGTATGCTGGTTCGCCATGATTTTGCCGTTTGAGACTAGAAAAATATATATGGGATGAAAAATCAAAGCTTTCATTGAGAAAAGACAAGCCAAATATGAAAGAAGCTCGGACAAAAAATTTAAACTGGGGCTCTAATCGATAAGAATGATAGGTAAAGGATAATTATTGAACTCCTTACATGCCAAAAAGTTCCTCCCTTGTCCTGAACCAGTTAGTGTCATCAATCAATACTCTTTCTTTCGAGCCAAACACATGCCAGCCATCTCCCTAAAATCATCTCCAGTAATAAAGTTAGCTTCCATCAATATATATTGAGCTGAAGCAAAAATCTCAGTAATAGTCAGACGAATCATGTAAGTAAAAAAGTCATAGCAAATCTTGTGGCTACATGTACTAAAATCGAAGTTTCCTAAACTATATCGACTGGCTGGTACCAAAGAGGACACTGTCAAAGAGGTTTGGGATACAGAACATTGTTCTTGGTCCCTAAAATTCAGACAACTCTTAAAAGACGATGAGATTCTAGAGTGGGCTGCATTCACTCAAATTATTCCTAATATTGTCCTCATTGACAGAGATGGAAACTTGATACAAATGGACTTTCCTCAAAATTTTTATATTCTCACCTCACTACAAATGGGACCTCAACAACAAATGAACCATTCAAGAAGATTTGGAGAAGCACATGCCCAAAAAGAATGAATTTCCTTCTGTGGGAAGTTACTCATTCATGTCTTAATACCATGGATAGACTTTAAACGTTGCCCATTGATCAACTTATCTCCATCTTCGTGCTGCCTATGTCGGGCCAACTCTATCCAATGTATCCATCATCTTTTCTTCAATTGGCCTTTCTCCAAAAGGATTTGGTCGGAATTTTTCACAGCTTTCAACTGGTCCGTGGTCAAGTTGCCTCCGTTTATTATTCATCGATCTACCTTTTAAAGCCACTAAAGAGCGTTTATGGATTTGCATTATATATGCAGTTTTGTGGAAGATTTGGGTGAAAGAAATGCAAGAATCTTCCAGGAAAAAAGCAAGACTTCCAAGGACATTATTGACTTTGCCATCTTTAATGCTTTTTTTGGTGTAAAAATATACCAAAAAACCATGGTTTTTCTTTCCTTATTGCAAATAGAAAACATCTTTTGTATACCCTTTAATGAGTCCTTTTGTATCTTTTGATATTTTTGGATATTTTTCATTCATCAATGAAATTGTTTTTTTGTCCAAAGAAAAAAGAAAAAAAAAAACCAGCAATAATTTGCGCAAACTGGCACATCCATGCAATATTGGGATGGGAATTATTGTGTTTGATCGTTTATACTACTCTGAAACCATGTGATATGGGAAGTGAAGAAAATTGGCTTTGGTTTGATGCTACGCATGTCACATGATTACACTTGTCAAGTACTGAAATTGAGAGGGCCAACTCATTTGGAACACTTTTGGATAACAAGCATGTCATTATCACCATGTTTGGACTTGGATGTGCAAAAACAACAGAAATGCAGAAAAGGAGAGGCAATATCAAATATTTGTCAGAGAAGGATTATACTTGTTTCTTAAGCATTAAATTGTTTGAACGTATTTGATTCTACATTCTTCAACCTTTGTAATCTGCAGTTATGGACTTGTGCCTCTCTTCTGCTTCTGCTCCTGCTCCTGCTAATGACCATCTGCTATGTTCATATTTTTGCAGCATCAAGATCATATTCTCGTGGTGAGCGAAAACATTATGACCTCTTTGGAAATGTCCGGCCTGGTGATAAGGAATTTAGGAAAGCCTGGGAAAAACAGATGAATGAAGAAGAATCTACTTTATGGACAGACAGTGATGAAGAGGCAGACGATAAAGAAGAGAAAAAAAATCGTCTTGAAGATGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCTGACTTGATTGATGCTGATGACAGTGATGAATTATGGAGTGTTTGGTCTGGGAGCGATGAAGAGAAGACCTTGTGGACTGGTAGTGAAGGTGACGACGATGATGATATTCCTACAGAGGCCTATCCCAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCTAAATACCGAACAATTTCGGAACTCTTGAAATCTGAACAGGAACCAGAAGAGCTATCCCCTGGAAAACAAGCCAGGAAACTTGCTGTCGAGAATGCATTGAAGAAGTTAAAGAAAGGGCCGGATGGTCGTTATACCAATGTGTGGGAGGTCATGAGCGATACAGATATATTAATAGGAGCTTTTGAAAACATAGTCTCAGGACCTGAATATGCAGAACTCAGACAGGGAGGGCAGAAGAAATTGAATATTCAGTTTTTCAAGGATATACAAGCACGCATGAGAGATCCAAATTTTAAGTTCTCGCCTGAACTGAAGTTGAAACCAAAAAGCAAACTAGTTCCCCAAAAGAAGTGGCAGAAAGCACAATCTAGACGAAGGAAAGCACAGAAGCGATGA

mRNA sequence

ATGGGGATGTTATGGACTTGTGCCTCTCTTCTGCTTCTGCTCCTGCTCCTGCTAATGACCATCTGCTATGTTCATATTTTTGCAGCATCAAGATCATATTCTCGTGGTGAGCGAAAACATTATGACCTCTTTGGAAATGTCCGGCCTGGTGATAAGGAATTTAGGAAAGCCTGGGAAAAACAGATGAATGAAGAAGAATCTACTTTATGGACAGACAGTGATGAAGAGGCAGACGATAAAGAAGAGAAAAAAAATCGTCTTGAAGATGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCTGACTTGATTGATGCTGATGACAGTGATGAATTATGGAGTGTTTGGTCTGGGAGCGATGAAGAGAAGACCTTGTGGACTGGTAGTGAAGGTGACGACGATGATGATATTCCTACAGAGGCCTATCCCAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCTAAATACCGAACAATTTCGGAACTCTTGAAATCTGAACAGGAACCAGAAGAGCTATCCCCTGGAAAACAAGCCAGGAAACTTGCTGTCGAGAATGCATTGAAGAAGTTAAAGAAAGGGCCGGATGGTCGTTATACCAATGTGTGGGAGGTCATGAGCGATACAGATATATTAATAGGAGCTTTTGAAAACATAGTCTCAGGACCTGAATATGCAGAACTCAGACAGGGAGGGCAGAAGAAATTGAATATTCAGTTTTTCAAGGATATACAAGCACGCATGAGAGATCCAAATTTTAAGTTCTCGCCTGAACTGAAGTTGAAACCAAAAAGCAAACTAGTTCCCCAAAAGAAGTGGCAGAAAGCACAATCTAGACGAAGGAAAGCACAGAAGCGATGA

Coding sequence (CDS)

ATGGGGATGTTATGGACTTGTGCCTCTCTTCTGCTTCTGCTCCTGCTCCTGCTAATGACCATCTGCTATGTTCATATTTTTGCAGCATCAAGATCATATTCTCGTGGTGAGCGAAAACATTATGACCTCTTTGGAAATGTCCGGCCTGGTGATAAGGAATTTAGGAAAGCCTGGGAAAAACAGATGAATGAAGAAGAATCTACTTTATGGACAGACAGTGATGAAGAGGCAGACGATAAAGAAGAGAAAAAAAATCGTCTTGAAGATGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCTGACTTGATTGATGCTGATGACAGTGATGAATTATGGAGTGTTTGGTCTGGGAGCGATGAAGAGAAGACCTTGTGGACTGGTAGTGAAGGTGACGACGATGATGATATTCCTACAGAGGCCTATCCCAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCTAAATACCGAACAATTTCGGAACTCTTGAAATCTGAACAGGAACCAGAAGAGCTATCCCCTGGAAAACAAGCCAGGAAACTTGCTGTCGAGAATGCATTGAAGAAGTTAAAGAAAGGGCCGGATGGTCGTTATACCAATGTGTGGGAGGTCATGAGCGATACAGATATATTAATAGGAGCTTTTGAAAACATAGTCTCAGGACCTGAATATGCAGAACTCAGACAGGGAGGGCAGAAGAAATTGAATATTCAGTTTTTCAAGGATATACAAGCACGCATGAGAGATCCAAATTTTAAGTTCTCGCCTGAACTGAAGTTGAAACCAAAAAGCAAACTAGTTCCCCAAAAGAAGTGGCAGAAAGCACAATCTAGACGAAGGAAAGCACAGAAGCGATGA

Protein sequence

MGMLWTCASLLLLLLLLLMTICYVHIFAASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDKEEKKNRLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNESSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTNVWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPELKLKPKSKLVPQKKWQKAQSRRRKAQKR

Homology

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BLAST of Lsi05G002920 vs. TrEMBL
Match: A0A0A0L8W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185140 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 4.6e-135
Identity = 250/265 (94.34%), Postives = 259/265 (97.74%), Query Frame = 1


Query: 29  ASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDKEEKKNRLE 88
           +SRSYSRGE KHYDLFG VRPGDKEFRKAWEKQMNEEESTLWT+SD+EADDKE+KKNRLE
Sbjct: 42  SSRSYSRGECKHYDLFGTVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDKEQKKNRLE 101

Query: 89  DEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNESS 148
           DEIRK RQQAKEHSDLIDADDSDELWSVWS SDE+KTLWTGSEGDDDDDIPTEAYPNE S
Sbjct: 102 DEIRKTRQQAKEHSDLIDADDSDELWSVWSESDEDKTLWTGSEGDDDDDIPTEAYPNERS 161

Query: 149 DKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN 208
           DKYID+LFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN
Sbjct: 162 DKYIDKLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN 221

Query: 209 VWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPELKL 268
           VWEVMSD DILIGAFEN+VSGPEYAELRQGGQKKLN+QFFKDIQARMRDPNFKFSPELKL
Sbjct: 222 VWEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPELKL 281

Query: 269 KPKSKLVPQKKWQKAQSRRRKAQKR 294
           KPKSKLVPQK+WQKAQSRRRKAQKR
Sbjct: 282 KPKSKLVPQKRWQKAQSRRRKAQKR 306

[Close]

BLAST of Lsi05G002920 vs. TrEMBL
Match: W9RE63_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004899 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 4.5e-122
Identity = 228/268 (85.07%), Postives = 256/268 (95.52%), Query Frame = 1


Query: 27  FAASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEAD-DKEEKKN 86
           F ASRSY+RG RKHYDLFG+ +PGD EFRKAW+K+M +E++ +WT S++E+D +KE +K 
Sbjct: 53  FQASRSYTRGNRKHYDLFGSAKPGDDEFRKAWKKEM-DEDNCVWTGSEDESDGEKEGRKG 112

Query: 87  RLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPN 146
            LEDEIRKVRQ+AKEHS+LIDADDSDEL+SVWSGSDEEKTLWTGSEGDDDDDIPTEAYPN
Sbjct: 113 NLEDEIRKVRQKAKEHSNLIDADDSDELYSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPN 172

Query: 147 ESSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGR 206
           E+SDKY+D+LFEFEETSKYRTISE+LK+EQEPEELSPGKQARKLAVENALKKLKKGPDGR
Sbjct: 173 EASDKYVDKLFEFEETSKYRTISEMLKAEQEPEELSPGKQARKLAVENALKKLKKGPDGR 232

Query: 207 YTNVWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPE 266
           YTNVWEVMSDTDILIGAFENIVSGPEYAELRQGG K+LN+QFFKDIQARMRDPN+KFSPE
Sbjct: 233 YTNVWEVMSDTDILIGAFENIVSGPEYAELRQGGPKRLNMQFFKDIQARMRDPNYKFSPE 292

Query: 267 LKLKPKSKLVPQKKWQKAQSRRRKAQKR 294
           LKLKPKSKLVP+KKWQKA+SRRRKA+KR
Sbjct: 293 LKLKPKSKLVPRKKWQKAESRRRKARKR 319

[Close]

BLAST of Lsi05G002920 vs. TrEMBL
Match: A0A067JFH7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02498 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.3e-118
Identity = 226/270 (83.70%), Postives = 245/270 (90.74%), Query Frame = 1


Query: 27  FAASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWT---DSDEEADDKEEK 86
           F ASRSY+R + KHYDLFG V+PGDKEF+ AW+K+M EE++ LWT   D  EE +D E+ 
Sbjct: 53  FQASRSYARSKGKHYDLFGTVKPGDKEFKNAWKKEM-EEDACLWTGSEDESEEENDSEKG 112

Query: 87  KNRLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAY 146
           KN LE EIRKVRQQAKEHS LI+ADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAY
Sbjct: 113 KNHLEKEIRKVRQQAKEHSHLINADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAY 172

Query: 147 PNESSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPD 206
           PNE+SDKY+D+LFEF+E  KYRTISELLK+E EPEELSPGKQARKLAVENALKKLKKGPD
Sbjct: 173 PNEASDKYLDKLFEFDEKPKYRTISELLKAENEPEELSPGKQARKLAVENALKKLKKGPD 232

Query: 207 GRYTNVWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFS 266
           GRY NVWEVMSD DILIGAFENIVSGPEY ELRQGG KKLN+QFFKDIQARMRDPN+KFS
Sbjct: 233 GRYINVWEVMSDIDILIGAFENIVSGPEYEELRQGGPKKLNMQFFKDIQARMRDPNYKFS 292

Query: 267 PELKLKPKSKLVPQKKWQKAQSRRRKAQKR 294
           PELKLKPKSKLVP+KKWQKAQSRRRKAQKR
Sbjct: 293 PELKLKPKSKLVPRKKWQKAQSRRRKAQKR 321

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BLAST of Lsi05G002920 vs. TrEMBL
Match: B9T7Q1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0140630 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 4.3e-117
Identity = 224/273 (82.05%), Postives = 248/273 (90.84%), Query Frame = 1


Query: 27  FAASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDKEEK--- 86
           FAASRSY+R   KHYDLFG+ +PGD+EF+KAW+K+M+E++  LWT S++E D+ E+K   
Sbjct: 18  FAASRSYARSRGKHYDLFGSAKPGDEEFKKAWKKEMDEDDC-LWTGSEDE-DENEDKNYS 77

Query: 87  ---KNRLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPT 146
              +N LE E+RKVRQQAKEHS LIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPT
Sbjct: 78  EKGQNPLEKEVRKVRQQAKEHSHLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPT 137

Query: 147 EAYPNESSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKK 206
           EAYPNE+SDKY+D+LFEFEE  KYRTISELLK+E EPEELSPGKQARKLAVENALKKLKK
Sbjct: 138 EAYPNEASDKYLDKLFEFEEKPKYRTISELLKAENEPEELSPGKQARKLAVENALKKLKK 197

Query: 207 GPDGRYTNVWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNF 266
           GPDGRYTNVWEVMSD DILIGAFENIVSGPEY ELRQGG K+LN+QFFKDIQARMRDPN+
Sbjct: 198 GPDGRYTNVWEVMSDIDILIGAFENIVSGPEYEELRQGGPKRLNMQFFKDIQARMRDPNY 257

Query: 267 KFSPELKLKPKSKLVPQKKWQKAQSRRRKAQKR 294
           KFSPELKLKPKSKLVP+KKWQK QSRRRKAQKR
Sbjct: 258 KFSPELKLKPKSKLVPRKKWQKTQSRRRKAQKR 288

[Close]

BLAST of Lsi05G002920 vs. TrEMBL
Match: M5WTT5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017602mg PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 5.7e-117
Identity = 222/264 (84.09%), Postives = 249/264 (94.32%), Query Frame = 1


Query: 30  SRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDKEEKKNRLED 89
           SRSY+RG  K YDLFGN +PGDK+FRKAW+K++ +E+++LWT S+EE+D+++++K+ LE 
Sbjct: 1   SRSYARGGHKPYDLFGNGQPGDKDFRKAWKKEI-DEDASLWTGSEEESDNEKDEKSHLEK 60

Query: 90  EIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNESSD 149
           EIRKVRQQA+EHS+LIDADDSDEL SVWSGSDEEK+LWTGSEGDDDDDIPTE YPNESSD
Sbjct: 61  EIRKVRQQAREHSNLIDADDSDELRSVWSGSDEEKSLWTGSEGDDDDDIPTEPYPNESSD 120

Query: 150 KYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTNV 209
           K+ID+LFEFEETSKYRTISELLK+EQEPEELSPGKQARK+AVENALKKLKKGPDGRY NV
Sbjct: 121 KHIDKLFEFEETSKYRTISELLKAEQEPEELSPGKQARKIAVENALKKLKKGPDGRYINV 180

Query: 210 WEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPELKLK 269
           WEVMSD DILIGAFENIVSGPEYAELRQGG KKLNIQFFKDIQARMRDPN+KFSPELKLK
Sbjct: 181 WEVMSDLDILIGAFENIVSGPEYAELRQGGPKKLNIQFFKDIQARMRDPNYKFSPELKLK 240

Query: 270 PKSKLVPQKKWQKAQSRRRKAQKR 294
           PKSKLV +KKWQK QSRRRKAQKR
Sbjct: 241 PKSKLVRRKKWQKTQSRRRKAQKR 263

[Close]

BLAST of Lsi05G002920 vs. TAIR10
Match: AT5G17460.2 (AT5G17460.2 unknown protein)

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-110
Identity = 205/267 (76.78%), Postives = 235/267 (88.01%), Query Frame = 1


Query: 30  SRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDK---EEKKNR 89
           +R Y+ G  K Y+LFGNV+PGD +FRK WEK+M E++ TLW+ S++E++DK   E  +NR
Sbjct: 64  TRFYASGRGKDYNLFGNVKPGDDDFRKTWEKEM-EDDDTLWSGSEDESNDKTKQESGRNR 123

Query: 90  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNE 149
           LE EI+K RQQAK+ +D ID DDSDEL+SVWSGSDEEKTLWTG EGDDDDDIPTE  PNE
Sbjct: 124 LEKEIKKARQQAKDSTDQIDGDDSDELYSVWSGSDEEKTLWTGDEGDDDDDIPTEPRPNE 183

Query: 150 SSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRY 209
           +SDKY+D+LFEFEE  KYRTISELLKSE EPEELSPGK+ARKLAVENALKKL KGPDGRY
Sbjct: 184 ASDKYLDKLFEFEEKPKYRTISELLKSENEPEELSPGKKARKLAVENALKKLNKGPDGRY 243

Query: 210 TNVWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPEL 269
           TNVWEVMSD DILIGAFENI+SGPEY ELR+GG K+LN+QFFKDIQ RMRDPNFKF+PE+
Sbjct: 244 TNVWEVMSDVDILIGAFENIISGPEYEELRKGGPKRLNMQFFKDIQTRMRDPNFKFTPEI 303

Query: 270 KLKPKSKLVPQKKWQKAQSRRRKAQKR 294
           KLKPKSKLVP+KKWQKAQSR RKA+KR
Sbjct: 304 KLKPKSKLVPRKKWQKAQSRIRKAKKR 329

[Close]

BLAST of Lsi05G002920 vs. NCBI nr
Match: gi|659114506|ref|XP_008457085.1| (PREDICTED: uncharacterized protein LOC103496851 isoform X1 [Cucumis melo])

HSP 1 Score: 492.3 bits (1266), Expect = 6.0e-136
Identity = 252/267 (94.38%), Postives = 259/267 (97.00%), Query Frame = 1


Query: 27  FAASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDKEEKKNR 86
           F ASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWT+SD+EADD+E KKN 
Sbjct: 48  FQASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDEERKKNH 107

Query: 87  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNE 146
           LEDEIRK RQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDD PTEAYPNE
Sbjct: 108 LEDEIRKTRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDSPTEAYPNE 167

Query: 147 SSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRY 206
            SDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRY
Sbjct: 168 RSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRY 227

Query: 207 TNVWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPEL 266
           TNVWEVMSD DILIGAFEN+VSGPEYAELRQGGQKKLN+QFFKDIQARMRDPNFKFSPEL
Sbjct: 228 TNVWEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPEL 287

Query: 267 KLKPKSKLVPQKKWQKAQSRRRKAQKR 294
           KLKPKSKL+ QK+WQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKLISQKRWQKAQSRRRKAQKR 314

[Close]

BLAST of Lsi05G002920 vs. NCBI nr
Match: gi|659114512|ref|XP_008457087.1| (PREDICTED: uncharacterized protein LOC103496851 isoform X2 [Cucumis melo])

HSP 1 Score: 489.6 bits (1259), Expect = 3.9e-135
Identity = 250/265 (94.34%), Postives = 258/265 (97.36%), Query Frame = 1


Query: 29  ASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDKEEKKNRLE 88
           +SRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWT+SD+EADD+E KKN LE
Sbjct: 42  SSRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDEERKKNHLE 101

Query: 89  DEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNESS 148
           DEIRK RQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDD PTEAYPNE S
Sbjct: 102 DEIRKTRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDSPTEAYPNERS 161

Query: 149 DKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN 208
           DKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN
Sbjct: 162 DKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN 221

Query: 209 VWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPELKL 268
           VWEVMSD DILIGAFEN+VSGPEYAELRQGGQKKLN+QFFKDIQARMRDPNFKFSPELKL
Sbjct: 222 VWEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPELKL 281

Query: 269 KPKSKLVPQKKWQKAQSRRRKAQKR 294
           KPKSKL+ QK+WQKAQSRRRKAQKR
Sbjct: 282 KPKSKLISQKRWQKAQSRRRKAQKR 306

[Close]

BLAST of Lsi05G002920 vs. NCBI nr
Match: gi|449445963|ref|XP_004140741.1| (PREDICTED: uncharacterized protein LOC101207731 [Cucumis sativus])

HSP 1 Score: 488.8 bits (1257), Expect = 6.6e-135
Identity = 250/265 (94.34%), Postives = 259/265 (97.74%), Query Frame = 1


Query: 29  ASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDKEEKKNRLE 88
           +SRSYSRGE KHYDLFG VRPGDKEFRKAWEKQMNEEESTLWT+SD+EADDKE+KKNRLE
Sbjct: 42  SSRSYSRGECKHYDLFGTVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDKEQKKNRLE 101

Query: 89  DEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNESS 148
           DEIRK RQQAKEHSDLIDADDSDELWSVWS SDE+KTLWTGSEGDDDDDIPTEAYPNE S
Sbjct: 102 DEIRKTRQQAKEHSDLIDADDSDELWSVWSESDEDKTLWTGSEGDDDDDIPTEAYPNERS 161

Query: 149 DKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN 208
           DKYID+LFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN
Sbjct: 162 DKYIDKLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTN 221

Query: 209 VWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPELKL 268
           VWEVMSD DILIGAFEN+VSGPEYAELRQGGQKKLN+QFFKDIQARMRDPNFKFSPELKL
Sbjct: 222 VWEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPELKL 281

Query: 269 KPKSKLVPQKKWQKAQSRRRKAQKR 294
           KPKSKLVPQK+WQKAQSRRRKAQKR
Sbjct: 282 KPKSKLVPQKRWQKAQSRRRKAQKR 306

[Close]

BLAST of Lsi05G002920 vs. NCBI nr
Match: gi|703101160|ref|XP_010097113.1| (hypothetical protein L484_004899 [Morus notabilis])

HSP 1 Score: 445.7 bits (1145), Expect = 6.4e-122
Identity = 228/268 (85.07%), Postives = 256/268 (95.52%), Query Frame = 1


Query: 27  FAASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEAD-DKEEKKN 86
           F ASRSY+RG RKHYDLFG+ +PGD EFRKAW+K+M +E++ +WT S++E+D +KE +K 
Sbjct: 53  FQASRSYTRGNRKHYDLFGSAKPGDDEFRKAWKKEM-DEDNCVWTGSEDESDGEKEGRKG 112

Query: 87  RLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPN 146
            LEDEIRKVRQ+AKEHS+LIDADDSDEL+SVWSGSDEEKTLWTGSEGDDDDDIPTEAYPN
Sbjct: 113 NLEDEIRKVRQKAKEHSNLIDADDSDELYSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPN 172

Query: 147 ESSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGR 206
           E+SDKY+D+LFEFEETSKYRTISE+LK+EQEPEELSPGKQARKLAVENALKKLKKGPDGR
Sbjct: 173 EASDKYVDKLFEFEETSKYRTISEMLKAEQEPEELSPGKQARKLAVENALKKLKKGPDGR 232

Query: 207 YTNVWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPE 266
           YTNVWEVMSDTDILIGAFENIVSGPEYAELRQGG K+LN+QFFKDIQARMRDPN+KFSPE
Sbjct: 233 YTNVWEVMSDTDILIGAFENIVSGPEYAELRQGGPKRLNMQFFKDIQARMRDPNYKFSPE 292

Query: 267 LKLKPKSKLVPQKKWQKAQSRRRKAQKR 294
           LKLKPKSKLVP+KKWQKA+SRRRKA+KR
Sbjct: 293 LKLKPKSKLVPRKKWQKAESRRRKARKR 319

[Close]

BLAST of Lsi05G002920 vs. NCBI nr
Match: gi|1009126535|ref|XP_015880208.1| (PREDICTED: uncharacterized protein LOC107416248 [Ziziphus jujuba])

HSP 1 Score: 438.3 bits (1126), Expect = 1.0e-119
Identity = 226/267 (84.64%), Postives = 249/267 (93.26%), Query Frame = 1


Query: 27  FAASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTDSDEEADDKEEKKNR 86
           F   RSY+R  RKHYDLFGN +PGD+EFRKAW+K+M +EE+ LWT S++E+DD ++ KN 
Sbjct: 54  FQVIRSYARDRRKHYDLFGNGKPGDEEFRKAWKKEM-DEETCLWTGSEDESDDGKDGKNN 113

Query: 87  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNE 146
           LE EI+KVRQ+A+EHSDLIDADDSDEL SVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNE
Sbjct: 114 LEKEIQKVRQKAREHSDLIDADDSDELRSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNE 173

Query: 147 SSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRY 206
           SSDK+ID+LFEFEETSKYRTISELLK EQEPEELSPGKQARK+AVENALKKLKKGPDGRY
Sbjct: 174 SSDKHIDKLFEFEETSKYRTISELLKDEQEPEELSPGKQARKIAVENALKKLKKGPDGRY 233

Query: 207 TNVWEVMSDTDILIGAFENIVSGPEYAELRQGGQKKLNIQFFKDIQARMRDPNFKFSPEL 266
           TNVWEVMSD DILIGAFENIVSGPEYAELRQGG KKLNIQFFKDIQARMRDPN+KFSPEL
Sbjct: 234 TNVWEVMSDLDILIGAFENIVSGPEYAELRQGGPKKLNIQFFKDIQARMRDPNYKFSPEL 293

Query: 267 KLKPKSKLVPQKKWQKAQSRRRKAQKR 294
           KLKPK+KLVP+KKWQK +SRRRKA+KR
Sbjct: 294 KLKPKTKLVPRKKWQKTESRRRKARKR 319

The following BLAST results are available for this feature:

BLAST of Lsi05G002920 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G002920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8W2_CUCSA	4.6e-135	94.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185140 PE=4 SV=1	[more]
W9RE63_9ROSA	4.5e-122	85.07	Uncharacterized protein OS=Morus notabilis GN=L484_004899 PE=4 SV=1	[more]
A0A067JFH7_JATCU	2.3e-118	83.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02498 PE=4 SV=1	[more]
B9T7Q1_RICCO	4.3e-117	82.05	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0140630 PE=4 SV=1	[more]
M5WTT5_PRUPE	5.7e-117	84.09	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017602mg PE=4 S...	[more]

BLAST of Lsi05G002920 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17460.2	1.2e-110	76.78	unknown protein	[more]

BLAST of Lsi05G002920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114506\|ref\|XP_008457085.1\|	6.0e-136	94.38	PREDICTED: uncharacterized protein LOC103496851 isoform X1 [Cucumis melo]	[more]
gi\|659114512\|ref\|XP_008457087.1\|	3.9e-135	94.34	PREDICTED: uncharacterized protein LOC103496851 isoform X2 [Cucumis melo]	[more]
gi\|449445963\|ref\|XP_004140741.1\|	6.6e-135	94.34	PREDICTED: uncharacterized protein LOC101207731 [Cucumis sativus]	[more]
gi\|703101160\|ref\|XP_010097113.1\|	6.4e-122	85.07	hypothetical protein L484_004899 [Morus notabilis]	[more]
gi\|1009126535\|ref\|XP_015880208.1\|	1.0e-119	84.64	PREDICTED: uncharacterized protein LOC107416248 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002920.1	Lsi05G002920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 70..104 scor
None	No IPR available	PANTHER	PTHR38393	FAMILY NOT NAMED	coord: 24..293 score: 2.0E
None	No IPR available	PANTHER	PTHR38393:SF1	SUBFAMILY NOT NAMED	coord: 24..293 score: 2.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002920	Csa3G185140	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002920	CSPI03G17500	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002920	Cucsa.108350	Cucumber (Gy14) v1	cgylsiB144
Lsi05G002920	CmaCh14G008580	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G002920	CmoCh14G008720	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G002920	Cla013161	Watermelon (97103) v1	lsiwmB361
Lsi05G002920	MELO3C020303	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002920	ClCG05G010840	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002920	MELO3C020303.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002920	Cla97C05G093150	Watermelon (97103) v2	lsiwmbB329
Lsi05G002920	Bhi01G001337	Wax gourd	lsiwgoB431
Lsi05G002920	Cp4.1LG03g05720	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G002920	CsGy3G017530	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002920	Carg24231	Silver-seed gourd	carlsiB158
Lsi05G002920	CsaV3_3G017670	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002920	Cucumber (Gy14) v1	cgylsiB322
Lsi05G002920	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G002920	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G002920	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G002920	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G002920	Silver-seed gourd	carlsiB700
Lsi05G002920	Cucumber (Chinese Long) v3	cuclsiB231