CsGy3G017530 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAAAATTAAGTATCCGTACGAATTTCTATATCTCTACTACACAAAGGGTAAAAAAATTCGAAAGGAAAAAGCAATTTCTCATTCAAATATAGAACTCGGATGAAAAATGAAAAGAAAAATAGCTTCGCAAAGCCGTTGAGAAATTTCCACATTCGAGATAGAAAATGATTGTTTGTAGCCTCCGTTCCCGCCTTCTTCCTCTTCTTCACTCTGTTCTACACTCATCTTCTTCAAGGTCACTCTCTTCTCCCCAAAACTTTTTGATCAAATTAACTCACTTTTCATGTTTCTCTCTTCTACTTGCATATTGAATTTTTGTTTCCATGTCGAACACAACACTTTCTTACAGAGAAAAGAAATAAGAAACCTGACCATTTGCCTTTCTTGCGTTCTTTAGATTGCTAAACGTTTCGGAAGATGCTGCAAGAAGTTTAAGAACGTGGGTTAATTGTGGGTTTCGTCCAAATTTCCAAGTCAAGTGTTTTGGTGGCTTAAATTTTGCACCTTTCATTTTATACTTTTCTGAACTTGTTGCCTTTGTTATGGGGTTGATTGGTGAATGGGAATCTTTCTTATGAAGCTTGGAAGTTATGTTTATGGGCTGTGGTGGTACTTCGGTTATTGAATAATTTGTTGTGGACACCATGTGTTTGTTAAAAGTCCATAAAGAAGCAGTTGTTGGGTATTTGTATAATTTTCTTTTCTTGCTTTAGTAGTTTAGGCTTGGTCATCACTGAAGTCTTGGCGAGTTATCCATGTGGTTATGGAACTGTGCTGTTGCTCTTTATTTGTGTGGGATTTTATATCTTTTGCTTGTCAATGAACGTTAATTTGTGTTAAATGGGATGACCTACTAAATTTATTGTTTGTTGATTATAAGAATTTGTCTATTTTCTATATGCTGGTTGGCTATGCTTTTTCCTTTTGAGATGAGAAAAATATATCTGTGATGAAAATCAAGCTACATGTACTAAAAAGTAAAAACTAGCTATAATTTACGTGAACGGGCAACACCATAATATATTGGAATGAGAAATATTGTGTTTGATCATATTTACTACACTGGAACCATGTGATATGGGACATGAGAGATTGCCCCCATTTAGTCGGGATGCCATTTAGAAAATTGGCTTTTGTTTGATGCTACACACAACACAACTACTGAAATTGAGAGGGCCAACTCATTTGGAACACTTTTGGACTACAGGCATGCTATTATCACCATGTTTGGACTTAGATGTACGAAAACAACAAAAATGAAAAAATTTAGACGAAATATTAAATATTTATCAGAGAAGGATTACACTGGTTTCTTAAGCATTAAATTGTTTGAACATGGTTGGTTATCTGGTGATAGCATATCTTATTGAACAGGTCTTTTCAGCTTATACTTCATAACCATACATTATTTCATAGTACAAAAAAAGCATTAAATTGTTTGAATGTATTTGATTTTACATTCTTCAAACCTTTGTAATTCAGTTAAGGACTTGTTCTTCTGCTTCTGCTTATGACCACCTGCTCTATTCATATATTTTGCAGCATCAAGATCATATTCCCGTGGGGAGTGCAAACATTATGACCTCTTTGGAACTGTACGGCCTGGTGATAAGGAATTTAGGAAAGCCTGGGAAAAGCAGATGAATGAAGAAGAATCTACTTTATGGACAGAAAGCGATGATGAGGCAGACGATAAGGAGCAGAAAAAAAATCGTCTCGAAGATGAGATAAGAAAGACGAGGCAGCAGGCAAAAGAACACTCTGACTTGATTGATGCTGATGACAGTGATGAATTATGGAGCGTTTGGTCTGAGAGCGATGAAGACAAGACCTTGTGGACTGGTAGTGAAGGTGACGATGACGATGATATTCCTACAGAAGCCTACCCCAATGAACGTAGTGACAAATACATAGATAAACTATTCGAATTTGAGGAAACATCTAAATACCGAACAATTTCAGAACTCTTAAAATCCGAACAGGAACCAGAAGAGTTGTCCCCTGGAAAACAAGCCAGGAAACTTGCTGTCGAGAATGCATTGAAGAAGTTAAAGAAAGGGCCGGATGGTCGTTATACCAATGTGTGGGAGGTTATGAGTGATGTAGATATATTAATAGGAGCTTTCGAAAACGTAGTCTCGGGACCTGAATATGCAGAGCTCAGACAGGGAGGGCAGAAGAAATTGAATATGCAGTTTTTCAAGGATATACAAGCACGTATGAGAGATCCAAATTTTAAGTTCTCGCCTGAACTGAAGTTGAAACCAAAAAGCAAACTGGTTCCCCAAAAGAGGTGGCAGAAAGCACAATCTAGACGAAGGAAAGCACAGAAACGATAAGTATAAATTTTCTTTTTGCCTCCATTTATGAATTTTATCATTTTATCTACTTATTCGACTCTTACCTTAGTGTTTATATGTATCTGGTGGCTACAATTTAGTTTATAAGAATTCTTCCGAGCACATCCCACAAGTATCATACAAGTATATTGGTTCATCTCCTACGTTCCTGTAGTCTCTCTTTTTCCATTTCTTTCATTTGATATTTAGGAGGATAGTGACTGATCTCCAGAATGGGACTATGATATGAACTGTTATTTATTTATCAACAGAGGTACAAAGTCGAGGGAAGAATTGTAGAGCTTTCTCTCTCTCCCTCAATCAGCCTCTCAATGACTAACCAAAAAGATACCTCTCACAGCGCATCATTTTCCAAGTACAACGCATGACCCCTACACGTAAATTCACTATCGAACCCACTCCTAACTAACTCGTAACATTCTTTTCCCCCCACTCTTTTCTTATGCCCTTACTCCTATACACATTTGTGATTAGGGGTCTAGTCTATCAAATTATTTTAATGCAAATAGGTTTTGCTTTTCGCCTGTTTCATTTTTGGTTTTATTTTGCTATATGAAAGTAAAAAACAGAGGATTCAATACATGCATGTTTGAGTTCCTATGCTCACATATATTTCTTTTATAAATTTGGGTATCCAAGTATAGGGCCTACTCATATCATGCTCGTAATTCATTCGCTGATCTTGGTGATGCTTTGCCCAAACACCAACTCTGATAGGCAAGCGATTCCAAATTGTTAAATCTCCGTTTGGTAACCATTTTGTTTTTAATATATGGTTTTTAAAAATTAAGGTTATTTCCATTTTTTTTTTTTACCGTAATCATCTTTCTTGATTATCAAAGTTGAATTCTTAGCCAATTTTCAAGAACAAAATGAGTAGTGTAAAACTATTTTATTTTTAGTTTTCAAAAATTGACTCACGTTTTAAAATTATTGACTTAATTTGCAAAAAACTAAAAACAAAAACCAAACGGTTAGAAATAGGGCCTAATTTTTCCACCCAGTACTTGAACCTAAAACCTTGAGAGTATCTCTAACCATTCCATACACTTTTTACCAAAACTATTTCTTGGCATCCCATGCTCATGAAAGTTCAATACCAAACATCTCACTATTATAAGCAGCTAAGTTCGATAAAGGTATGAAGTAGTTGAAGTGAAAGAACATTATCTGTCTAAACAGTTAATGAAATACTGTCAACATGCATATTAAAATGAAGACCTAAACTAGCACCTTTGATTAAACACACTCCTGATATAGTATGTCTTACTATTCTGTTGGTTGTTTGCTTCTCATAATTGCCTTTAATGTTCGATCATTCTCATGTATCAGTCAAGCATAAGGGAAATCTGGAAAGATGCCAAATCGATAGTCTCGAACACATGTATTATCTGGAACCCCGTCAAACTGAAAATCTTGAATGCCTACATTATGAGCCATGGATATCATCTGGTTTCCCAGCTTTTCATTATCATAGACAGCTCTTGCCTTCTGTGCTGCAGTTGTAGTGACTGGATGATACCGGAAACTGTTGGACATGCCACTTTCTTGATCGAGGTAACGTTCAAATAGCGACCGATTGTTGAATTCTCTATTAAGTATAGGAAGCATGTGCTGATTTTGGAAGGTATAGTATGGGTCTGTTGCATCTTTCATCTGGTTGTCTATGTATTTTCTTAGGTTTGATTCTTCACCTTCACCATGTTTGGAAGTTGAAGGCCAAAGTTCAGCATGCTTACCTAATTTTTTAAGCTTCTTTATCAAAATGGTTGAATCCACATTGCCCGTCACTGTGACCTTTTGTTGTTCACAATTTATGTCTATCTTATAAACTCCTAAATTCCATAAGATCAAATGAGAATAAGGCTGTATATTTGAATTCCAATAATAAAAGTTAGCCAATGGAAGATGTTATATTTGAAATCACTATTTTAAAAACATTTGTTTCAAAACACAAAAGGCTC GAGAAAATTAAGTATCCGTACGAATTTCTATATCTCTACTACACAAAGGGTAAAAAAATTCGAAAGGAAAAAGCAATTTCTCATTCAAATATAGAACTCGGATGAAAAATGAAAAGAAAAATAGCTTCGCAAAGCCGTTGAGAAATTTCCACATTCGAGATAGAAAATGATTGTTTGTAGCCTCCGTTCCCGCCTTCTTCCTCTTCTTCACTCTGTTCTACACTCATCTTCTTCAAGATTGCTAAACGTTTCGGAAGATGCTGCAAGAAGTTTAAGAACGTGGGTTAATTGTGGGTTTCGTCCAAATTTCCAAGTCAAGTGTTTTGGTGGCTTAAATTTTGCACCTTTCATTTTATACTTTTCTGAACTTGTTGCCTTTGTTATGGGGTTGATTGCATCAAGATCATATTCCCGTGGGGAGTGCAAACATTATGACCTCTTTGGAACTGTACGGCCTGGTGATAAGGAATTTAGGAAAGCCTGGGAAAAGCAGATGAATGAAGAAGAATCTACTTTATGGACAGAAAGCGATGATGAGGCAGACGATAAGGAGCAGAAAAAAAATCGTCTCGAAGATGAGATAAGAAAGACGAGGCAGCAGGCAAAAGAACACTCTGACTTGATTGATGCTGATGACAGTGATGAATTATGGAGCGTTTGGTCTGAGAGCGATGAAGACAAGACCTTGTGGACTGGTAGTGAAGGTGACGATGACGATGATATTCCTACAGAAGCCTACCCCAATGAACGTAGTGACAAATACATAGATAAACTATTCGAATTTGAGGAAACATCTAAATACCGAACAATTTCAGAACTCTTAAAATCCGAACAGGAACCAGAAGAGTTGTCCCCTGGAAAACAAGCCAGGAAACTTGCTGTCGAGAATGCATTGAAGAAGTTAAAGAAAGGGCCGGATGGTCGTTATACCAATGTGTGGGAGGTTATGAGTGATGTAGATATATTAATAGGAGCTTTCGAAAACGTAGTCTCGGGACCTGAATATGCAGAGCTCAGACAGGGAGGGCAGAAGAAATTGAATATGCAGTTTTTCAAGGATATACAAGCACGTATGAGAGATCCAAATTTTAAGTTCTCGCCTGAACTGAAGTTGAAACCAAAAAGCAAACTGGTTCCCCAAAAGAGGTGGCAGAAAGCACAATCTAGACGAAGGAAAGCACAGAAACGATAATCAAGCATAAGGGAAATCTGGAAAGATGCCAAATCGATAGTCTCGAACACATGTATTATCTGGAACCCCGTCAAACTGAAAATCTTGAATGCCTACATTATGAGCCATGGATATCATCTGGTTTCCCAGCTTTTCATTATCATAGACAGCTCTTGCCTTCTGTGCTGCAGTTGTAGTGACTGGATGATACCGGAAACTGTTGGACATGCCACTTTCTTGATCGAGGTAACGTTCAAATAGCGACCGATTGTTGAATTCTCTATTAAGTATAGGAAGCATGTGCTGATTTTGGAAGGTATAGTATGGGTCTGTTGCATCTTTCATCTGGTTGTCTATGTATTTTCTTAGGTTTGATTCTTCACCTTCACCATGTTTGGAAGTTGAAGGCCAAAGTTCAGCATGCTTACCTAATTTTTTAAGCTTCTTTATCAAAATGGTTGAATCCACATTGCCCGTCACTGTGACCTTTTGTTGTTCACAATTTATGTCTATCTTATAAACTCCTAAATTCCATAAGATCAAATGAGAATAAGGCTGTATATTTGAATTCCAATAATAAAAGTTAGCCAATGGAAGATGTTATATTTGAAATCACTATTTTAAAAACATTTGTTTCAAAACACAAAAGGCTC ATGATTGTTTGTAGCCTCCGTTCCCGCCTTCTTCCTCTTCTTCACTCTGTTCTACACTCATCTTCTTCAAGATTGCTAAACGTTTCGGAAGATGCTGCAAGAAGTTTAAGAACGTGGGTTAATTGTGGGTTTCGTCCAAATTTCCAAGTCAAGTGTTTTGGTGGCTTAAATTTTGCACCTTTCATTTTATACTTTTCTGAACTTGTTGCCTTTGTTATGGGGTTGATTGCATCAAGATCATATTCCCGTGGGGAGTGCAAACATTATGACCTCTTTGGAACTGTACGGCCTGGTGATAAGGAATTTAGGAAAGCCTGGGAAAAGCAGATGAATGAAGAAGAATCTACTTTATGGACAGAAAGCGATGATGAGGCAGACGATAAGGAGCAGAAAAAAAATCGTCTCGAAGATGAGATAAGAAAGACGAGGCAGCAGGCAAAAGAACACTCTGACTTGATTGATGCTGATGACAGTGATGAATTATGGAGCGTTTGGTCTGAGAGCGATGAAGACAAGACCTTGTGGACTGGTAGTGAAGGTGACGATGACGATGATATTCCTACAGAAGCCTACCCCAATGAACGTAGTGACAAATACATAGATAAACTATTCGAATTTGAGGAAACATCTAAATACCGAACAATTTCAGAACTCTTAAAATCCGAACAGGAACCAGAAGAGTTGTCCCCTGGAAAACAAGCCAGGAAACTTGCTGTCGAGAATGCATTGAAGAAGTTAAAGAAAGGGCCGGATGGTCGTTATACCAATGTGTGGGAGGTTATGAGTGATGTAGATATATTAATAGGAGCTTTCGAAAACGTAGTCTCGGGACCTGAATATGCAGAGCTCAGACAGGGAGGGCAGAAGAAATTGAATATGCAGTTTTTCAAGGATATACAAGCACGTATGAGAGATCCAAATTTTAAGTTCTCGCCTGAACTGAAGTTGAAACCAAAAAGCAAACTGGTTCCCCAAAAGAGGTGGCAGAAAGCACAATCTAGACGAAGGAAAGCACAGAAACGATAA MIVCSLRSRLLPLLHSVLHSSSSRLLNVSEDAARSLRTWVNCGFRPNFQVKCFGGLNFAPFILYFSELVAFVMGLIASRSYSRGECKHYDLFGTVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDKEQKKNRLEDEIRKTRQQAKEHSDLIDADDSDELWSVWSESDEDKTLWTGSEGDDDDDIPTEAYPNERSDKYIDKLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTNVWEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPELKLKPKSKLVPQKRWQKAQSRRRKAQKR
BLAST of CsGy3G017530 vs. NCBI nr
Match: XP_004140741.1 (PREDICTED: uncharacterized protein LOC101207731 [Cucumis sativus] >XP_011651194.1 PREDICTED: uncharacterized protein LOC101207731 [Cucumis sativus] >XP_011651195.1 PREDICTED: uncharacterized protein LOC101207731 [Cucumis sativus] >XP_011651197.1 PREDICTED: uncharacterized protein LOC101207731 [Cucumis sativus] >KGN57434.1 hypothetical protein Csa_3G185140 [Cucumis sativus]) HSP 1 Score: 461.1 bits (1185), Expect = 3.3e-126 Identity = 305/341 (89.44%), Postives = 306/341 (89.74%), Query Frame = 0
BLAST of CsGy3G017530 vs. NCBI nr
Match: XP_008457085.1 (PREDICTED: uncharacterized protein LOC103496851 [Cucumis melo] >XP_008457086.1 PREDICTED: uncharacterized protein LOC103496851 [Cucumis melo]) HSP 1 Score: 449.9 bits (1156), Expect = 7.7e-123 Identity = 271/341 (79.47%), Postives = 273/341 (80.06%), Query Frame = 0
BLAST of CsGy3G017530 vs. NCBI nr
Match: XP_022143293.1 (uncharacterized protein LOC111013198 [Momordica charantia]) HSP 1 Score: 425.2 bits (1092), Expect = 2.0e-115 Identity = 254/341 (74.49%), Postives = 266/341 (78.01%), Query Frame = 0
BLAST of CsGy3G017530 vs. NCBI nr
Match: XP_022935143.1 (uncharacterized protein LOC111442102 [Cucurbita moschata]) HSP 1 Score: 416.0 bits (1068), Expect = 1.2e-112 Identity = 241/342 (70.47%), Postives = 252/342 (73.68%), Query Frame = 0
BLAST of CsGy3G017530 vs. NCBI nr
Match: XP_023528329.1 (uncharacterized protein LOC111791283 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 414.8 bits (1065), Expect = 2.7e-112 Identity = 248/342 (72.51%), Postives = 258/342 (75.44%), Query Frame = 0
BLAST of CsGy3G017530 vs. TAIR10
Match: AT5G17460.2 (unknown protein) HSP 1 Score: 303.5 bits (776), Expect = 1.6e-82 Identity = 196/336 (58.33%), Postives = 222/336 (66.07%), Query Frame = 0
BLAST of CsGy3G017530 vs. TrEMBL
Match: tr|A0A0A0L8W2|A0A0A0L8W2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185140 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 2.2e-126 Identity = 305/341 (89.44%), Postives = 306/341 (89.74%), Query Frame = 0
BLAST of CsGy3G017530 vs. TrEMBL
Match: tr|A0A1S3C5E2|A0A1S3C5E2_CUCME (uncharacterized protein LOC103496851 OS=Cucumis melo OX=3656 GN=LOC103496851 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 5.1e-123 Identity = 271/341 (79.47%), Postives = 273/341 (80.06%), Query Frame = 0
BLAST of CsGy3G017530 vs. TrEMBL
Match: tr|A0A2P5DVW3|A0A2P5DVW3_PARAD (Glutamyl-tRNA (Gln) amidotransferase subunit C OS=Parasponia andersonii OX=3476 GN=PanWU01x14_025970 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 9.7e-90 Identity = 194/264 (73.48%), Postives = 215/264 (81.44%), Query Frame = 0
BLAST of CsGy3G017530 vs. TrEMBL
Match: tr|A0A067JFH7|A0A067JFH7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02498 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 2.8e-89 Identity = 224/344 (65.12%), Postives = 243/344 (70.64%), Query Frame = 0
BLAST of CsGy3G017530 vs. TrEMBL
Match: tr|W9RE63|W9RE63_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004899 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.1e-88 Identity = 204/266 (76.69%), Postives = 225/266 (84.59%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|