Lsi05G002790 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGAAATTGCCGTTTACATTCAGCAAGAGAAAAAATTTCAAACAAACAAACAAAAAACAAATAATAATAATAATAAAAATAAGAAACAAAAAAAACAAAACAAATAATTTGGATCTGTCGTTCTTCGAGCAGATCAGATCCGGGGGTTCAAATTCATCATCGTCTTCATCCTACTTCCCGCATCGCCATTTTTGCAGCTTCAAAGGTATTAATCACTCTATCAATCCTCTTTTCGCTTTCCATTACAATATGCGCCACACTAAGCTTTGTGTTCTTCCATATTCTCTGTACCTAATGCTTCTCTATCCGTTTTTCTCGGGTTTTTTTTTTAAATTTTCTTTTCCTATCTTGTTGATATATTGATTTTTAGATGCATTTCTGATTGTTATGTAATTCAATTAAGAAATTTATGGAATTAGAAATGACCTTTGTGATCTCTGTTTCCGAGAAATGGAATGTAATGTACGTATATCGTTGAGGGTTTGTGGTAATTGATATTGATTGTGTCTGGATTAGCGTTATATATATATATATATATTCAATCTTATGGAGAGAGAAAGAAGATCTTTTTCTTCTTAGTTCTAAAGTTAATTAGGTAGTATTTTAGATTAAACATGGTGGTGTGGTGGGTGGAAACATGGATCCATGGAGAGGGGAGTGAACAATGTAGTTATTGGAAATTTTCTCTTTTCATTATTTTTCTTCCAAATTCCTGAATGATGTACTTTGCATCTAATGAAATAAGAGTAATGTAATCTGCATAAGTTCTTTTGTTATTATTATATGTTGCTCTGCATTTTTCTTTAATTCCTTATTATCTTTGGTTCTTTTTTTAATGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGGCTTGAGAAAAGTTGAGTGGTAGATCTTTCTATTTCTGATATTGGATGGTATGCTTTCTATTGATGAAATATTGTCATATTTTATCTCTGATTTCTGTCTGTCAACTAAAAGAGCTGGCATAATGTTCGAGGGTTGGTTCCATTTCAGAGAAATGGTTGCCCATCTATAAATTGGAGCGAGCTTTTAAATTGGTCGTTCAGTGAAAGACACTGCCAGTTCATTTGCCCCTGACTTATAACTAATGATTCTTTAAGTTTTACCTGCAGGCTGCAAATTTATAATTATTGGCGTTGCTGTTTAACTGAGATTTACTAGTTAATCATGTCTGAGCATATCAAAGAGACCGAACGAGTGGATGGAGATGGACATGTTGGATCTGAAGAATCTGTGTCGTCATCTCGGAAGGAGGTTTGCAACTTCATACATAAGCATTTAAATTTTCTATAATAACGTCTAGATTTTATTACAAAGTTACCAATTTGAAGTTGGTGGCTAATTTTCAATACAGGAGGAAGTTATAAAGAAAAAATATGGAGGGATTGTTCCCAAGAAGCCACCACTCATTTCTAAGGTACTTTTCTCTTGTCAAAAATCATGTATTCTTGAGATCCGTGCATCCTTCCACTTGCGTGTCTAAAGCCTTTGAATCCCAATTTCAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCATTGGGAAAGGTATTTGTACCATAAACTTATATTGCCTTTTACTCGATTTTGAAATCAGTTTGCATAACTTCACTAATTGACTAATATATCCTCCTTAATTTATCTGATTGCAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTAGAAGCTCTTCGGCCGAAATTACAGGTTGGAGAATATATATATGAACAAGAAACAAACTCTTCACTATGTTATGCATATGGTCTTCATCTCAAGTAGACAACGTTTGATATTATTTTATGGTAGAGGTCTTGAGTAATAACACATGTGCTGAACAGAGTGCTTATCCATCTCAAAATTTAGACCTTGTCCTCTTGAATAAAAGTTGAAGGCATAACAATGTTGGTTTACATTTTGTTTTCAATTTTCTAATTTTAAGTATCTAGTTATTATATTAGAATATGAGACTGTTTTTCCTTCAAGGCAAAAGGAGGGAAAAAAATTTTGGTAACCCTTGCTTGACTTTTGTTTTTGAGAAATTTAAAAAGTTTAAATTGAAAGTTAATAATATTTCATCTTAATCTCCATCTATTGAGAATTATAATGATAACAAACAACATTGTAATTTATTGGAAGAAAGTTGCAAGAAGGTAAAAGTGAAATGTTGGTACAAAGAGATTTACCAAGAATAAAGAGAGAGAAACTGTTCAAAGATAAACTAGGGAGAGAAATTTCTGGGTCAAAGAAAGTACATGTTTAAAAAACATGCATGAAAGACAATATGTAAACAAGGGATAAGTGAGAGAGTTTTTGGATAGAGATGAGTTAAAAACAAGTGTGTGAAAGCATACATAGAGAGAAACAGATGAGAAAAAAAAATATTGGATCTAAATTTGGACATTTGAAAGTATCGAAAGAAATGAGAGCGCTCATTACCAAAATCAGCATAGGACCCAATCAATTACAGTGACACCATATAGGTTTCCCGAGAAAAGAAAAGTTTACCAAGAAGTTATAAGTGAAAAAAGCTTGAGTAATTAGACAATATGATTGAAAGGGTTGAAAATAAATAACAGACGTGACTTAATCCTGAGAAGGATTGTGCTGCCATTACGATATCTGCTAGTACGTTACTTTGACAAGGCATCTGTACGAGTACGATTGTTATATGATTTGTTATTCTTGTAATTTCCTTTTTATTGCTCTTCTTCTTTTGTTAATACCATCAAGCAGGACTTATGTGATTTCAATTTTTTTTTTTCTCTTGCATAGCCAACACAACAGCAGACACGATACAGGAAGTCTCCTTATGCTCCATCAGATGGCGAAGGTATGCCCACTATTGAAGCTTTAGCTGAAACTAACCAACTTTGATCAGGTCTTTAAACTTTCAAGATTATGTCTATCTAGTCCTTAAACTTTAATTATGTGTCTAACAAGTAGTTGTCATTAGGTTTGTAGTTTAACACATCTACCTGGCTTGCCTACTATATTATATAATGGCCATGCTGCCTCTGATTTCAAACAATTCCAGTGATTGTTGACATGAACGTTAAATTGAAGTAGTTAATGTCAAATATCTATTAAACATAAAATTGAAAGTTTAAGAGCTCATTAGAAACTTTTTAAAGTTTAGAGATTAAACATAATCTTATTAGTTCAAGGACGTATTAGAAACTTTTGAAAGTAAAAAGAATTCAATATATACAAATCTTGAAAGTTCGTAGACCAAACTTATTACTTATCCCAAAAAACGAGAAGTTGCTCGTCCATTCTCGACAACTCTATGCTGTACGGTATTGGTATGATCGCGATATATGTTTATATTCACGCAGATGGAGGAACTGCTCCGAATGAATGAACAACAGCTGTTGCTTGTGCTTGTTGTAGCTGCTTTGTTGTATCTTACTCCAGTTGAATGCCTGTCTAGGTATGAGCAATTTTCTTTTGTTTTTTAGAATACAATTGCTCGGGTTCGGGATTTGTTATTGTGCTTACATTAAGAATATCTATTGTATGGAGAATGATAACTACATTGATCTATTTCATATTTGTCATTGATTACAATTGACAAATATTATGACTTATAAGAGTCAAATTAAAAAATGTTTTAGTAGATTTGTGAGATATTGTGTATTCTAGACCACGTGCCTTCATCTTACCACCCTTAATTTAGTTTGA TGTGAAATTGCCGTTTACATTCAGCAAGAGAAAAAATTTCAAACAAACAAACAAAAAACAAATAATAATAATAATAAAAATAAGAAACAAAAAAAACAAAACAAATAATTTGGATCTGTCGTTCTTCGAGCAGATCAGATCCGGGGGTTCAAATTCATCATCGTCTTCATCCTACTTCCCGCATCGCCATTTTTGCAGCTTCAAAGGCTGCAAATTTATAATTATTGGCGTTGCTGTTTAACTGAGATTTACTAGTTAATCATGTCTGAGCATATCAAAGAGACCGAACGAGTGGATGGAGATGGACATGTTGGATCTGAAGAATCTGTGTCGTCATCTCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGGATTGTTCCCAAGAAGCCACCACTCATTTCTAAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTAGAAGCTCTTCGGCCGAAATTACAGATGGAGGAACTGCTCCGAATGAATGAACAACAGCTGTTGCTTGTGCTTGTTGTAGCTGCTTTGTTGTATCTTACTCCAGTTGAATGCCTGTCTAGGTATGAGCAATTTTCTTTTGTTTTTTAGAATACAATTGCTCGGGTTCGGGATTTGTTATTGTGCTTACATTAAGAATATCTATTGTATGGAGAATGATAACTACATTGATCTATTTCATATTTGTCATTGATTACAATTGACAAATATTATGACTTATAAGAGTCAAATTAAAAAATGTTTTAGTAGATTTGTGAGATATTGTGTATTCTAGACCACGTGCCTTCATCTTACCACCCTTAATTTAGTTTGA ATGTCTGAGCATATCAAAGAGACCGAACGAGTGGATGGAGATGGACATGTTGGATCTGAAGAATCTGTGTCGTCATCTCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGGATTGTTCCCAAGAAGCCACCACTCATTTCTAAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTAGAAGCTCTTCGGCCGAAATTACAGATGGAGGAACTGCTCCGAATGAATGAACAACAGCTGTTGCTTGTGCTTGTTGTAGCTGCTTTGTTGTATCTTACTCCAGTTGAATGCCTGTCTAGGTATGAGCAATTTTCTTTTGTTTTTTAG MSEHIKETERVDGDGHVGSEESVSSSRKEEEVIKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQGVEKPKGPLEALRPKLQMEELLRMNEQQLLLVLVVAALLYLTPVECLSRYEQFSFVF
BLAST of Lsi05G002790 vs. TrEMBL
Match: A0A0A0L6T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186700 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 8.4e-38 Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 1
BLAST of Lsi05G002790 vs. TrEMBL
Match: D7TSV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02010 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.8e-27 Identity = 61/82 (74.39%), Postives = 75/82 (91.46%), Query Frame = 1
BLAST of Lsi05G002790 vs. TrEMBL
Match: A5ATI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013098 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.8e-27 Identity = 61/82 (74.39%), Postives = 75/82 (91.46%), Query Frame = 1
BLAST of Lsi05G002790 vs. TrEMBL
Match: A0A067FIC6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033401mg PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.9e-27 Identity = 62/84 (73.81%), Postives = 73/84 (86.90%), Query Frame = 1
BLAST of Lsi05G002790 vs. TrEMBL
Match: A0A067FAM4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033401mg PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.9e-27 Identity = 62/83 (74.70%), Postives = 72/83 (86.75%), Query Frame = 1
BLAST of Lsi05G002790 vs. TAIR10
Match: AT5G64130.3 (AT5G64130.3 cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 103.6 bits (257), Expect = 8.9e-23 Identity = 58/108 (53.70%), Postives = 70/108 (64.81%), Query Frame = 1
BLAST of Lsi05G002790 vs. TAIR10
Match: AT1G69510.1 (AT1G69510.1 cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21 Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = 1
BLAST of Lsi05G002790 vs. TAIR10
Match: AT4G16146.1 (AT4G16146.1 cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 1
BLAST of Lsi05G002790 vs. NCBI nr
Match: gi|659114545|ref|XP_008457105.1| (PREDICTED: uncharacterized protein LOC103496861 [Cucumis melo]) HSP 1 Score: 167.2 bits (422), Expect = 1.9e-38 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 1
BLAST of Lsi05G002790 vs. NCBI nr
Match: gi|449445951|ref|XP_004140735.1| (PREDICTED: uncharacterized protein LOC101206373 [Cucumis sativus]) HSP 1 Score: 164.5 bits (415), Expect = 1.2e-37 Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 1
BLAST of Lsi05G002790 vs. NCBI nr
Match: gi|147860363|emb|CAN80447.1| (hypothetical protein VITISV_013098 [Vitis vinifera]) HSP 1 Score: 130.2 bits (326), Expect = 2.5e-27 Identity = 61/82 (74.39%), Postives = 75/82 (91.46%), Query Frame = 1
BLAST of Lsi05G002790 vs. NCBI nr
Match: gi|296087204|emb|CBI33578.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 130.2 bits (326), Expect = 2.5e-27 Identity = 61/82 (74.39%), Postives = 75/82 (91.46%), Query Frame = 1
BLAST of Lsi05G002790 vs. NCBI nr
Match: gi|731417625|ref|XP_002270339.2| (PREDICTED: uncharacterized protein LOC100241624 [Vitis vinifera]) HSP 1 Score: 130.2 bits (326), Expect = 2.5e-27 Identity = 61/82 (74.39%), Postives = 75/82 (91.46%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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