CmoCh14G008770 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCTATGCCGTCGTCCCGGAAGGAGGTTTATAACTTCATACATAAGAATCATCTGTAATAACCTCTAAATTTTGTTACAAATTTACCAATTTGTTGAAGTTGGTAGCTTATTTTCTCTACAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCTCTCATTTCTAAGGTAATTTTTCTGTTCTAAAAAATTATGTAGTATTTCAGTAAGGTGTTCAATGAGATCCGTGCATACTTCCACATGGGTGTCTGAAGCTTTTGAATCTCGATTTCAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGGTATTTCTGTTGTATAACTTATATTTCCATTTTTACTTGATTCTGAAATCAGTTCGCATAACTTCACTAATTGACTAATATATCCTCCTTAATTTATCTGATTGCAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGGTTGGTGTGTGCGCGTGCGTGCAGATATATATATTAACAGGAAATGAAACTCCTCATTATATTATGCATATGATATTCATTTCAAGTAGAAAACTTTTGATATCATTTTAGGGTAGAGATCAAGTAATAACTCATGTGCTGAACAGAGTGGTTGTCCATCTCAAAATTTAGATCTTGACCTCTTGAGAATGAAGTATTTAGGCATAACAACTTAGTTTCCATTTTATTTTCAGGTTTCTAATTTTAGTGTCTAGTTATTTCATCTTAATCTCCATCTGTTAATAATTACAATAGGAACAACATTGTAATTTATTGGAAGAAAGCTGCAACGTAAAAAGTGAAATGTCTGTACAAGGAGATTAACCAAAAAAAAAGAAAGAAAGATAGTATGCAAAGATAAACTAGGGAGAGAAACGTGTGGGTGAAAGAATGTATATATTTAAAAAAATATGTAAGACAATGTGTAAACAAGGGATAAATTAGAGAAGTTAGTGTGAGAAAGCATACATAAAGAGAGACAGATGAGAAAAAAAAAATATTGGGAATGAATTTGGACATTTGAAAGTACAAGTACTAAAATAAAATAAGTTTCAAATTACATGAACCAATCAAGTACAGTGGCACTGAAGAGGTTTTCTACAAAAATAAAAGCTTTCCGAGAAGTCATGTAACAACCAAAACTCACCGCTAGCCTATATTGTCTTCTTTGGTCTTTTCCTTCCGGCTTTCCCTTCAAGGTTTTAAAATGCGTCGGTTAGGAAGAGGTTTCCACACCCATATAAGGAATGTTTCGTTCCCCTCTCTGACTAATGTGGGATCTCACAATCCACTCCCCTTGGGGGCCCAACGTCCTCGCTGGGGTGACTCGGTGTCTGGCTCTGATACCTTTTGTAACAAGCTCACCGTCATTAGATATTGTCATTTTTGGGTTCCCTTCTAGATTTTCCCTCAAGGTTTTAAAACGCGTTTGTTAGGGACCCATACCCTTATAAGGAATACTTTGTCCCCTCTCCAACCGATGTAAGATCTCACAAGTCATAAGTTTGAGTTTGAGTCATTACGATTGAAAAGGTTGAAAATAAATAATAGACATGACTTAATCTTGAGAAGGATGGTGCTGCCATTACCATATCTGCTACTATTTTTGCTCAAATTCAAGGATTACTTCTTACTATGACAAGATATCCATGCAATATCATGAAATGATTTGTTAGTCTTGTAATTTCATTTATTGCCTTTCTTCTTTTATTGTTCTATCATCAAGTAGAAGGACTTTATGTGATTGCAATTTTTCTTTTCTCTTGCGCATAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGGTATGCTCTACCATTGAAACTTAGCTCAAAAGAATCAACCTCAATTAAGTAAAAAAAAAAACACCACATGTATAATCTTGAAATTTCAGATACCAAACTTATTTTTTAACCCAAGAAAGGAGAAATTGTTTGTTCATTCTCTGACAACTCTAATGTACTGTTATGATATCGATATGTATTTATTCATGCAGATGGAGGAACTGCTCCGAATGAATAGGCAACTTCGAATGACTGAACAACTACTGCTGCTACTTGTGCTTGTTGCAGTTGTTTTGTTGTATCTCACTCCTGTTGAATGCCTGTTTAGGTATGAGCAATCTTCTTTTGTTTATTAGAATACAATTGCTCGGGTCGGGATCTGTTCTTGTGCTTACACTAAGAATATCTATCGTGCGGAGAATGATATTGGACATTAATCTATTTCATATTGTCATTGATATTGTGATTGATGATCATTTACAATGGTATTAATGAAACTTTTGAAAGGTTAGTGGTACTTTTGAAAAGGACGGA ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCTATGCCGTCGTCCCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCTCTCATTTCTAAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGATGGAGGAACTGCTCCGAATGAATAGGCAACTTCGAATGACTGAACAACTACTGCTGCTACTTGTGCTTGTTGCAGTTGTTTTGTTGTATCTCACTCCTGTTGAATGCCTGTTTAGGTATGAGCAATCTTCTTTTGTTTATTAGAATACAATTGCTCGGGTCGGGATCTGTTCTTGTGCTTACACTAAGAATATCTATCGTGCGGAGAATGATATTGGACATTAATCTATTTCATATTGTCATTGATATTGTGATTGATGATCATTTACAATGGTATTAATGAAACTTTTGAAAGGTTAGTGGTACTTTTGAAAAGGACGGA ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCTATGCCGTCGTCCCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCTCTCATTTCTAAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGATGGAGGAACTGCTCCGAATGAATAG
BLAST of CmoCh14G008770 vs. TrEMBL
Match: A0A0A0L6T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186700 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.2e-51 Identity = 104/111 (93.69%), Postives = 106/111 (95.50%), Query Frame = 1
BLAST of CmoCh14G008770 vs. TrEMBL
Match: D7TSV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02010 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.6e-43 Identity = 85/109 (77.98%), Postives = 102/109 (93.58%), Query Frame = 1
BLAST of CmoCh14G008770 vs. TrEMBL
Match: V4SXY0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013128mg PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 6.6e-42 Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 1
BLAST of CmoCh14G008770 vs. TrEMBL
Match: A0A067FAM4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033401mg PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 6.6e-42 Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 1
BLAST of CmoCh14G008770 vs. TrEMBL
Match: A0A061E1I4_THECC (CAMP-regulated phosphoprotein 19-related protein isoform 1 OS=Theobroma cacao GN=TCM_007505 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 7.3e-41 Identity = 86/109 (78.90%), Postives = 98/109 (89.91%), Query Frame = 1
BLAST of CmoCh14G008770 vs. TAIR10
Match: AT5G64130.3 (AT5G64130.3 cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 145.6 bits (366), Expect = 1.8e-35 Identity = 82/136 (60.29%), Postives = 94/136 (69.12%), Query Frame = 1
BLAST of CmoCh14G008770 vs. TAIR10
Match: AT1G69510.1 (AT1G69510.1 cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 111.7 bits (278), Expect = 2.9e-25 Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 1
BLAST of CmoCh14G008770 vs. TAIR10
Match: AT4G16146.1 (AT4G16146.1 cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 65.5 bits (158), Expect = 2.4e-11 Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1
BLAST of CmoCh14G008770 vs. NCBI nr
Match: gi|659114545|ref|XP_008457105.1| (PREDICTED: uncharacterized protein LOC103496861 [Cucumis melo]) HSP 1 Score: 213.0 bits (541), Expect = 2.7e-52 Identity = 105/111 (94.59%), Postives = 107/111 (96.40%), Query Frame = 1
BLAST of CmoCh14G008770 vs. NCBI nr
Match: gi|449445951|ref|XP_004140735.1| (PREDICTED: uncharacterized protein LOC101206373 [Cucumis sativus]) HSP 1 Score: 210.3 bits (534), Expect = 1.7e-51 Identity = 104/111 (93.69%), Postives = 106/111 (95.50%), Query Frame = 1
BLAST of CmoCh14G008770 vs. NCBI nr
Match: gi|296087204|emb|CBI33578.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 181.8 bits (460), Expect = 6.5e-43 Identity = 85/109 (77.98%), Postives = 102/109 (93.58%), Query Frame = 1
BLAST of CmoCh14G008770 vs. NCBI nr
Match: gi|731417625|ref|XP_002270339.2| (PREDICTED: uncharacterized protein LOC100241624 [Vitis vinifera]) HSP 1 Score: 181.8 bits (460), Expect = 6.5e-43 Identity = 85/109 (77.98%), Postives = 102/109 (93.58%), Query Frame = 1
BLAST of CmoCh14G008770 vs. NCBI nr
Match: gi|567876181|ref|XP_006430680.1| (hypothetical protein CICLE_v10013128mg [Citrus clementina]) HSP 1 Score: 177.9 bits (450), Expect = 9.5e-42 Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|