Carg24235 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCCATGCCGTCGTCCCGGAAGGAGGTTTATAACTTCATACATAAGAATCATCTGCAATAACCTCTAAATTTTGTTACAAATTTACCAATTTGTTGAAGTTGGAGGCTTATTTTCTCTACAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCGCTCATTTCTAAGGTAATTTTTCTGTTCTAAAAAATTATGTAGTATTTCAGTAAGATGTTCAATGAGATCCGTGCATCCTTCCACATGGCTGTCTGAAGCTTTTGAATCTCGATTTCAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGGTATTTCTGTTGTATAACTTATATTTCCATTTTTACTTGATTCTGAAATCAGTTCGCATAACTTCACTAATTGACTAATATATCCTCCTTAATTATCTGATTGCAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGGTTGGTGTGTGCGCGTGCGTGCAGATATATATATATATTAACAGGAAATGAAACTCTTCATTATATTATGCATATGATATTCATTTCAAGTAGAAAACTTTTGATATCATTTTAGGGTAGAGATCAAGTAATAACTCATGTGCTGAACAGAGTGGTTGTCCATCTCAAAATTTAGATCTTGACCTCTTGAATGAAGTATTTAGGCATAACAACTTAGTTTCCATTTTATTTTCAGGTTTCTAATTTTAGTGTCTAGTTATTTCATCTTAATCTCCATCTGTTAATAATTACAATAGGAACAACATTGTAATTTATTGGAAGAAAGCTGCAACGTAAAAAGTGAAATGTCTGTACAAGGAGATTAACCAAAAAGAAAGAAAGAAAGATAGTATGCAAAGATAAACTAGGGAGAGAAACGTGTGGGTGAAAGAATGTATATATTTAAAAAAATATGTAAGACAATAGGTAAACAAGGGATAAATTAGCGAAGTTAGTGTGAGAAAGCATGCATAAAGAGAGACAGATGAGAAAAAAAAAATATTGGGAATGAATTTGAACATTTGAAAGTACAAGTACTGAAATAAAATAAGTTTCAAATTACATGAACCAATCAAGTACAGTCGCACTGAAGAGGTTTTCTACGAAAATAAAAGCTTGCCGAGATGTCATGTAACAGCCAAAACTCACCGCTAGCCTATATTGTCATCTTTGGGCTTTCCCTTCAAAGTTTTAAAATGCGTCTGTTTGGAAGAGGTTTCCACACCCATATAAGGAATGTTTCGTTTCCCTCTCCAACTAATGTGGGATCTCACAATCCACTCCCCTTGGGGACCCAACGTCCTCGCTGGCACACCCCTCGGTGTCTGGCTCTGATACCATTTGTAACAGTCCAAGCTTACCGTCATTAGATATTGTCATTTTTGGGTTCCCTTCTAGGTTTTCCTTCAAAGTTTTAAAACGCGTTTGTTAGGGACCCACACCCTTATAAGGAATGCTTCGCCCCCTCTCCAACCGATATGGGATCTCACAAGTCGTAAGTGAATAAGCTTGAGTCATGATTGAGAAGGTTGAAAATAAATAATAGACATGACTTAATCTTGAGAAGGATGGAGCTGCCATTAACCATATCTGCTACTATTTTTGCTCAAATTCAAGGATTACTTCTTACTATGACAAGATATCCATACAATATGATGAAATGATTTGTTAGTCTTGTAATTTCATTTATTGCCTTCTTTTATTGTTCTATCATCGAGTAGAAGGACTTCATGTGATTGCAATTTTTCTTCTCTTGCATAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGGTATGCTCTACCATTGAAACTTAGCTCAAAAGAATCAACCTCAATTAAGTAAAAAAAAAAAAAAACTCCACATATATAATCTTGGAATTTCAGATACCAAACTTATTTTTTAACCCAAAAAAGGAGATATTGTTTGTTCATTCTCTGACAACTCTAATGTACTGTTATGATATCGATATGTATTTATTCATGCAGATGGAGGAACTGCTCCGAATGAATAGGCAACTTCGAATGACTGAACAACTACTGCTGCTACTTGTGCTTGTTGCAGTTGTTTTGTTGTATCTCACTCCTGTTGAATGCCTGTTT ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCCATGCCGTCGTCCCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCGCTCATTTCTAAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGGTTGAAGGACTTCATGTGATTGCAATTTTTCTTCTCTTGCATAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGATGGAGGAACTGCTCCGAATGAATAGGCAACTTCGAATGACTGAACAACTACTGCTGCTACTTGTGCTTGTTGCAGTTGTTTTGTTGTATCTCACTCCTGTTGAATGCCTGTTT ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCCATGCCGTCGTCCCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCGCTCATTTCTAAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGGTTGAAGGACTTCATGTGATTGCAATTTTTCTTCTCTTGCATAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGATGGAGGAACTGCTCCGAATGAATAGGCAACTTCGAATGACTGAACAACTACTGCTGCTACTTGTGCTTGTTGCAGTTGTTTTGTTGTATCTCACTCCTGTTGAATGCCTGTTT MSEHIKETERLDGDGHVGSEESMPSSRKEEEVIKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQGVEKPKGPLQALRPKLQVEGLHVIAIFLLLHSQHNSKHDTGSLLMLHPMAKMEELLRMNRQLRMTEQLLLLLVLVAVVLLYLTPVECLF
BLAST of Carg24235 vs. NCBI nr
Match: XP_022935662.1 (uncharacterized protein LOC111442452 [Cucurbita moschata] >XP_022935663.1 uncharacterized protein LOC111442452 [Cucurbita moschata] >XP_022935664.1 uncharacterized protein LOC111442452 [Cucurbita moschata] >XP_023526189.1 uncharacterized protein LOC111789742 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023526190.1 uncharacterized protein LOC111789742 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 124.4 bits (311), Expect = 3.4e-25 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Carg24235 vs. NCBI nr
Match: XP_022984130.1 (uncharacterized protein LOC111482517 [Cucurbita maxima] >XP_022984131.1 uncharacterized protein LOC111482517 [Cucurbita maxima] >XP_022984132.1 uncharacterized protein LOC111482517 [Cucurbita maxima] >XP_022984133.1 uncharacterized protein LOC111482517 [Cucurbita maxima]) HSP 1 Score: 124.4 bits (311), Expect = 3.4e-25 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Carg24235 vs. NCBI nr
Match: XP_023526186.1 (uncharacterized protein LOC111789742 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526187.1 uncharacterized protein LOC111789742 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526188.1 uncharacterized protein LOC111789742 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 119.8 bits (299), Expect = 8.4e-24 Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of Carg24235 vs. NCBI nr
Match: XP_022143267.1 (uncharacterized protein LOC111013179 [Momordica charantia]) HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23 Identity = 59/84 (70.24%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of Carg24235 vs. NCBI nr
Match: XP_023524491.1 (uncharacterized protein LOC111788392 [Cucurbita pepo subsp. pepo] >XP_023524492.1 uncharacterized protein LOC111788392 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21 Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Carg24235 vs. TAIR10
Match: AT1G69510.1 (cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Carg24235 vs. TAIR10
Match: AT5G64130.3 (cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13 Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0
BLAST of Carg24235 vs. TAIR10
Match: AT4G16146.1 (cAMP-regulated phosphoprotein 19-related protein) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A1S3C4C3|A0A1S3C4C3_CUCME (uncharacterized protein LOC103496861 OS=Cucumis melo OX=3656 GN=LOC103496861 PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.8e-20 Identity = 75/84 (89.29%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A0A0L6T2|A0A0A0L6T2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186700 PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.1e-19 Identity = 74/84 (88.10%), Postives = 76/84 (90.48%), Query Frame = 0
BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A2K2AT31|A0A2K2AT31_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G111900v3 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.7e-18 Identity = 52/77 (67.53%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A2N9IK02|A0A2N9IK02_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52281 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A2P4HTG5|A0A2P4HTG5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_15783 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17 Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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