Carg24235 (gene) Silver-seed gourd

NameCarg24235
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptioncAMP-regulated phosphoprotein-like protein
LocationCucurbita_argyrosperma_scaffold_191 : 127818 .. 130044 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCCATGCCGTCGTCCCGGAAGGAGGTTTATAACTTCATACATAAGAATCATCTGCAATAACCTCTAAATTTTGTTACAAATTTACCAATTTGTTGAAGTTGGAGGCTTATTTTCTCTACAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCGCTCATTTCTAAGGTAATTTTTCTGTTCTAAAAAATTATGTAGTATTTCAGTAAGATGTTCAATGAGATCCGTGCATCCTTCCACATGGCTGTCTGAAGCTTTTGAATCTCGATTTCAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGGTATTTCTGTTGTATAACTTATATTTCCATTTTTACTTGATTCTGAAATCAGTTCGCATAACTTCACTAATTGACTAATATATCCTCCTTAATTATCTGATTGCAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGGTTGGTGTGTGCGCGTGCGTGCAGATATATATATATATTAACAGGAAATGAAACTCTTCATTATATTATGCATATGATATTCATTTCAAGTAGAAAACTTTTGATATCATTTTAGGGTAGAGATCAAGTAATAACTCATGTGCTGAACAGAGTGGTTGTCCATCTCAAAATTTAGATCTTGACCTCTTGAATGAAGTATTTAGGCATAACAACTTAGTTTCCATTTTATTTTCAGGTTTCTAATTTTAGTGTCTAGTTATTTCATCTTAATCTCCATCTGTTAATAATTACAATAGGAACAACATTGTAATTTATTGGAAGAAAGCTGCAACGTAAAAAGTGAAATGTCTGTACAAGGAGATTAACCAAAAAGAAAGAAAGAAAGATAGTATGCAAAGATAAACTAGGGAGAGAAACGTGTGGGTGAAAGAATGTATATATTTAAAAAAATATGTAAGACAATAGGTAAACAAGGGATAAATTAGCGAAGTTAGTGTGAGAAAGCATGCATAAAGAGAGACAGATGAGAAAAAAAAAATATTGGGAATGAATTTGAACATTTGAAAGTACAAGTACTGAAATAAAATAAGTTTCAAATTACATGAACCAATCAAGTACAGTCGCACTGAAGAGGTTTTCTACGAAAATAAAAGCTTGCCGAGATGTCATGTAACAGCCAAAACTCACCGCTAGCCTATATTGTCATCTTTGGGCTTTCCCTTCAAAGTTTTAAAATGCGTCTGTTTGGAAGAGGTTTCCACACCCATATAAGGAATGTTTCGTTTCCCTCTCCAACTAATGTGGGATCTCACAATCCACTCCCCTTGGGGACCCAACGTCCTCGCTGGCACACCCCTCGGTGTCTGGCTCTGATACCATTTGTAACAGTCCAAGCTTACCGTCATTAGATATTGTCATTTTTGGGTTCCCTTCTAGGTTTTCCTTCAAAGTTTTAAAACGCGTTTGTTAGGGACCCACACCCTTATAAGGAATGCTTCGCCCCCTCTCCAACCGATATGGGATCTCACAAGTCGTAAGTGAATAAGCTTGAGTCATGATTGAGAAGGTTGAAAATAAATAATAGACATGACTTAATCTTGAGAAGGATGGAGCTGCCATTAACCATATCTGCTACTATTTTTGCTCAAATTCAAGGATTACTTCTTACTATGACAAGATATCCATACAATATGATGAAATGATTTGTTAGTCTTGTAATTTCATTTATTGCCTTCTTTTATTGTTCTATCATCGAGTAGAAGGACTTCATGTGATTGCAATTTTTCTTCTCTTGCATAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGGTATGCTCTACCATTGAAACTTAGCTCAAAAGAATCAACCTCAATTAAGTAAAAAAAAAAAAAAACTCCACATATATAATCTTGGAATTTCAGATACCAAACTTATTTTTTAACCCAAAAAAGGAGATATTGTTTGTTCATTCTCTGACAACTCTAATGTACTGTTATGATATCGATATGTATTTATTCATGCAGATGGAGGAACTGCTCCGAATGAATAGGCAACTTCGAATGACTGAACAACTACTGCTGCTACTTGTGCTTGTTGCAGTTGTTTTGTTGTATCTCACTCCTGTTGAATGCCTGTTT

mRNA sequence

ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCCATGCCGTCGTCCCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCGCTCATTTCTAAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGGTTGAAGGACTTCATGTGATTGCAATTTTTCTTCTCTTGCATAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGATGGAGGAACTGCTCCGAATGAATAGGCAACTTCGAATGACTGAACAACTACTGCTGCTACTTGTGCTTGTTGCAGTTGTTTTGTTGTATCTCACTCCTGTTGAATGCCTGTTT

Coding sequence (CDS)

ATGTCTGAGCATATCAAAGAGACTGAACGGCTGGATGGAGATGGACATGTTGGATCTGAAGAATCCATGCCGTCGTCCCGGAAGGAGGAGGAAGTTATAAAGAAAAAATATGGAGGAATTGTTCCCAAGAAGCCACCGCTCATTTCTAAGGATCATGAACGTGCGTATTTTGATTCTGCTGATTGGGCATTGGGAAAGCAAGGAGTTGAGAAGCCTAAAGGACCTTTACAAGCTCTTCGGCCAAAATTACAGGTTGAAGGACTTCATGTGATTGCAATTTTTCTTCTCTTGCATAGCCAACACAACAGCAAACACGATACAGGAAGTCTCCTTATGCTCCATCCGATGGCGAAGATGGAGGAACTGCTCCGAATGAATAGGCAACTTCGAATGACTGAACAACTACTGCTGCTACTTGTGCTTGTTGCAGTTGTTTTGTTGTATCTCACTCCTGTTGAATGCCTGTTT

Protein sequence

MSEHIKETERLDGDGHVGSEESMPSSRKEEEVIKKKYGGIVPKKPPLISKDHERAYFDSADWALGKQGVEKPKGPLQALRPKLQVEGLHVIAIFLLLHSQHNSKHDTGSLLMLHPMAKMEELLRMNRQLRMTEQLLLLLVLVAVVLLYLTPVECLF
BLAST of Carg24235 vs. NCBI nr
Match: XP_022935662.1 (uncharacterized protein LOC111442452 [Cucurbita moschata] >XP_022935663.1 uncharacterized protein LOC111442452 [Cucurbita moschata] >XP_022935664.1 uncharacterized protein LOC111442452 [Cucurbita moschata] >XP_023526189.1 uncharacterized protein LOC111789742 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023526190.1 uncharacterized protein LOC111789742 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.4 bits (311), Expect = 3.4e-25
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0

Query: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60
          MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA
Sbjct: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60

Query: 61 DWALGKQGVEKPKGPLQALRPKLQ 85
          DWALGKQGVEKPKGPLQALRPKLQ
Sbjct: 61 DWALGKQGVEKPKGPLQALRPKLQ 84

BLAST of Carg24235 vs. NCBI nr
Match: XP_022984130.1 (uncharacterized protein LOC111482517 [Cucurbita maxima] >XP_022984131.1 uncharacterized protein LOC111482517 [Cucurbita maxima] >XP_022984132.1 uncharacterized protein LOC111482517 [Cucurbita maxima] >XP_022984133.1 uncharacterized protein LOC111482517 [Cucurbita maxima])

HSP 1 Score: 124.4 bits (311), Expect = 3.4e-25
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0

Query: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60
          MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA
Sbjct: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60

Query: 61 DWALGKQGVEKPKGPLQALRPKLQ 85
          DWALGKQGVEKPKGPLQALRPKLQ
Sbjct: 61 DWALGKQGVEKPKGPLQALRPKLQ 84

BLAST of Carg24235 vs. NCBI nr
Match: XP_023526186.1 (uncharacterized protein LOC111789742 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526187.1 uncharacterized protein LOC111789742 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526188.1 uncharacterized protein LOC111789742 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.8 bits (299), Expect = 8.4e-24
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0

Query: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60
          MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA
Sbjct: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60

Query: 61 DWALGK-QGVEKPKGPLQALRPKLQ 85
          DWALGK QGVEKPKGPLQALRPKLQ
Sbjct: 61 DWALGKQQGVEKPKGPLQALRPKLQ 85

BLAST of Carg24235 vs. NCBI nr
Match: XP_022143267.1 (uncharacterized protein LOC111013179 [Momordica charantia])

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 59/84 (70.24%), Postives = 62/84 (73.81%), Query Frame = 0

Query: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60
          MSEHIKETER+DGDGHVGSE+ MPS                     LISKDHERAYFDSA
Sbjct: 1  MSEHIKETERVDGDGHVGSEKPMPSSQMEEEVIKKKYGGIVPKKPPLISKDHERAYFDSA 60

Query: 61 DWALGKQGVEKPKGPLQALRPKLQ 85
          DWALGKQGVEKPKGPL+ALRPKLQ
Sbjct: 61 DWALGKQGVEKPKGPLEALRPKLQ 84

BLAST of Carg24235 vs. NCBI nr
Match: XP_023524491.1 (uncharacterized protein LOC111788392 [Cucurbita pepo subsp. pepo] >XP_023524492.1 uncharacterized protein LOC111788392 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21
Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 0

Query: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60
          MSEHIKET R+DGDGHVGS+ES   XXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA
Sbjct: 1  MSEHIKETGRVDGDGHVGSQESXXXXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60

Query: 61 DWALGKQGVEKPKGPLQALRPKLQ 85
          DWALGKQGVEKPKGPL+ALRPKLQ
Sbjct: 61 DWALGKQGVEKPKGPLEALRPKLQ 84

BLAST of Carg24235 vs. TAIR10
Match: AT1G69510.1 (cAMP-regulated phosphoprotein 19-related protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0

Query: 47 LISKDHERAYFDSADWALGKQGVEKPKGPLQALRPKLQ 85
          LISKDHERA+FDSADWALGKQ  +KPKGPL+ALRPKLQ
Sbjct: 44 LISKDHERAFFDSADWALGKQKGQKPKGPLEALRPKLQ 81

BLAST of Carg24235 vs. TAIR10
Match: AT5G64130.3 (cAMP-regulated phosphoprotein 19-related protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0

Query: 49  SKDHERAYFDSADWALGKQGVEKPKGPLQALRPKLQ 85
           ++DHERAYFDSADWALGKQGV KPKGPL+ALRPKLQ
Sbjct: 72  NQDHERAYFDSADWALGKQGVAKPKGPLEALRPKLQ 107

BLAST of Carg24235 vs. TAIR10
Match: AT4G16146.1 (cAMP-regulated phosphoprotein 19-related protein)

HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05
Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0

Query: 47 LISKDHERAYFDSADWALGKQGV---EKPKGPLQALRPKLQ 85
          LISKD +RA+FDSADWAL KQ     ++    ++ LRPKLQ
Sbjct: 36 LISKDSKRAFFDSADWALLKQEASIDQRTIAAIEKLRPKLQ 76

BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A1S3C4C3|A0A1S3C4C3_CUCME (uncharacterized protein LOC103496861 OS=Cucumis melo OX=3656 GN=LOC103496861 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.8e-20
Identity = 75/84 (89.29%), Postives = 77/84 (91.67%), Query Frame = 0

Query: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60
          MSEHIKE ER+DGDGHVGSE     XXXXXXXXXXXXXXXXXXXXX ISKDHERAYFDSA
Sbjct: 1  MSEHIKEAERVDGDGHVGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXISKDHERAYFDSA 60

Query: 61 DWALGKQGVEKPKGPLQALRPKLQ 85
          DWALGKQGVEKPKGPL+ALRPKLQ
Sbjct: 61 DWALGKQGVEKPKGPLEALRPKLQ 84

BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A0A0L6T2|A0A0A0L6T2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186700 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-19
Identity = 74/84 (88.10%), Postives = 76/84 (90.48%), Query Frame = 0

Query: 1  MSEHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSA 60
          MSEHIKE ER+ GDGHVGSE     XXXXXXXXXXXXXXXXXXXXX ISKDHERAYFDSA
Sbjct: 1  MSEHIKEAERVGGDGHVGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXISKDHERAYFDSA 60

Query: 61 DWALGKQGVEKPKGPLQALRPKLQ 85
          DWALGKQGVEKPKGPL+ALRPKLQ
Sbjct: 61 DWALGKQGVEKPKGPLEALRPKLQ 84

BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A2K2AT31|A0A2K2AT31_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G111900v3 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.7e-18
Identity = 52/77 (67.53%), Postives = 57/77 (74.03%), Query Frame = 0

Query: 47  LISKDHERAYFDSADWALGKQGVEKPKGPLQALRPKLQVEGLHVIAIFLLLHSQHNSKHD 106
           LISKDHERAYFDSADWALGKQGV+KPKGPL+ALRPKLQV            +  HNSK D
Sbjct: 44  LISKDHERAYFDSADWALGKQGVDKPKGPLEALRPKLQV------------YIPHNSKRD 103

Query: 107 TGSLLMLHPMAKMEELL 124
           TGSLLM   M KM+ +L
Sbjct: 104 TGSLLMPQQMVKMQGVL 108

BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A2N9IK02|A0A2N9IK02_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52281 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17
Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 0

Query: 3  EHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSADW 62
          E +K+ ER+DGD  + SE+SMP                      LISKDHERAYFDSADW
Sbjct: 5  EDLKKQERVDGDVPMESEKSMPLSQEEEAAVKKKYGGILPKKPPLISKDHERAYFDSADW 64

Query: 63 ALGKQGVEKPKGPLQALRPKLQVEGLHVIAIF 95
          ALGKQGVEKPKGPL+ALRPKLQ +GL V++ +
Sbjct: 65 ALGKQGVEKPKGPLEALRPKLQ-DGLGVLSYY 95

BLAST of Carg24235 vs. TrEMBL
Match: tr|A0A2P4HTG5|A0A2P4HTG5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_15783 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17
Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 0

Query: 3   EHIKETERLDGDGHVGSEESMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSADW 62
           E +KE E++DGD  + SE+SMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSADW
Sbjct: 74  EDLKEKEQVDGDIPIESEKSMPSXXXXXXXXXXXXXXXXXXXXXLISKDHERAYFDSADW 133

Query: 63  ALGKQGVEKPKGPLQALRPKLQ 85
           ALGKQGVEKPKGPL+ALRPKLQ
Sbjct: 134 ALGKQGVEKPKGPLEALRPKLQ 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022935662.13.4e-25100.00uncharacterized protein LOC111442452 [Cucurbita moschata] >XP_022935663.1 unchar... [more]
XP_022984130.13.4e-25100.00uncharacterized protein LOC111482517 [Cucurbita maxima] >XP_022984131.1 uncharac... [more]
XP_023526186.18.4e-2498.82uncharacterized protein LOC111789742 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022143267.11.9e-2370.24uncharacterized protein LOC111013179 [Momordica charantia][more]
XP_023524491.13.9e-2191.67uncharacterized protein LOC111788392 [Cucurbita pepo subsp. pepo] >XP_023524492.... [more]
Match NameE-valueIdentityDescription
AT1G69510.11.6e-1386.84cAMP-regulated phosphoprotein 19-related protein[more]
AT5G64130.31.6e-1388.89cAMP-regulated phosphoprotein 19-related protein[more]
AT4G16146.16.2e-0556.10cAMP-regulated phosphoprotein 19-related protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C4C3|A0A1S3C4C3_CUCME4.8e-2089.29uncharacterized protein LOC103496861 OS=Cucumis melo OX=3656 GN=LOC103496861 PE=... [more]
tr|A0A0A0L6T2|A0A0A0L6T2_CUCSA3.1e-1988.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G186700 PE=3 SV=1[more]
tr|A0A2K2AT31|A0A2K2AT31_POPTR2.7e-1867.53Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G111900v3 PE=... [more]
tr|A0A2N9IK02|A0A2N9IK02_FAGSY2.2e-1756.52Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52281 PE=3 SV=1[more]
tr|A0A2P4HTG5|A0A2P4HTG5_QUESU2.2e-1786.59Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_15783 PE=3 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006760Endosulphine
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24235-RACarg24235-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006760EndosulphinePFAMPF04667Endosulfinecoord: 24..84
e-value: 6.9E-20
score: 70.9
IPR006760EndosulphinePANTHERPTHR10358ENDOSULFINEcoord: 3..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
NoneNo IPR availablePANTHERPTHR10358:SF17SUBFAMILY NOT NAMEDcoord: 3..85