Lsi05G002270 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G002270
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCystathionine beta-synthase (CBS) family protein
Locationchr05 : 3022185 .. 3030573 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATGTTTTTTTTAATCTTAACATATGAAACCTTAGTTTAATATATATATATATATATATATATATATATATATATCAAAAGTATCCAACGTTGTAATTTTGTTGTTTGTATGAAACCTGAGTATTTTGTGTACCTCAAGTATGAAGATTACATGCACAAAATTATAAAATATATAGTGTGGAGTTTTTAAGTTCACATTTTAATTGAGTGTTGAAAACTTAGGAAAGTATGGGTTCTTTGGGGCATTGAGTTGAGTTATGAAATCTATAGTTAATATGTATGTGGAATTAGAAAGCGTTTGTTTAAGGTGCATAGTTGTTTAGTCTAACACGCGTGTAAGAGAAATCAGAAACATCTCTGCACCTTAAACTATAGACTTCATATTAACTATATTAATCAATTCCACATACATATTAACTATAGACTTCATGCAGAGTTGAATTATTAAATCAGAAACATCTGGTGTAATTTTTACCTAAAAAAGTATGATTTTTATGGTGGTTATTTTTGTTAACTTAACTTTTTTTAACTCTTCTATTATTGCACATATATTTTCTCAAAATTTTAATGGTTAATTGAAATGTCAACTTAAAATCTTCAAATATGCTTTACAATTTTTTACATATAACCATTGTACTTGAGGTAGACAAAATACTATTGTTTCATATTATTGAGGGTTACCCAAGACAAGGCCCAAAGCTTATAAGCGGGTCCAAGCCCATAGGGTATTCAGAGGAGGCATAGAGGAATGTGCATCCCAAAAGGAAAAAGTCAATGCCTCGGGGTTTGGAACGGCCAACCGAGTTGGTAAATATATATCAATAAGGAAATAACTAAGTTGTAGTCGGACTGACACTCTACAACCTCGAGCGTCAGAAACAACCTTGACATCAACGACATTACATGGAACCAAAGACGAGTGTAAGAGAAATGGTCTATAAATGGCCCCATTCGATGATCCCTAAGGGGAAAAGTAAGTAATCTTCAAATGAAGACCCTGACCTTACTTCTTGTGTGCTTGGTGTGGTAGGCTTAACACCACACCGGTCCAAGAATTTCTTACGTAGGTCAGATCATAACAACTCAAGATGAACCAAGAGAAGTAGGCTGAAGGTCAAGCCCACGGGGTGGCCCGCATGACACCGAACGTGAACGAGATCCAAGCACCAACACATACAAACAAAAAAACCCCATATACTTTCATATTAGTGGAATATAAGAGATGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATTAAGGGGTTAAGGGCTTTCTATTGCATCTCATGTCAAATTGTAGTTTATGATTTATTATGCATGTATGTTGGAATTGAAATGCAATCAAAGTTCCACATTGGCTTAATAAAGGGGATGATCATGGGTATATAAGGGAGGACAACTATCTCCAATGACAAACTTTTTTTTTTAAACTAAAAGTAAAGCGCGATAATTTATATTTGAAGTGGACGATATCTTATCATCGTGGAGATGTCTGGAGATGAAAAGATGCAGTCATAATAGTATCCATCCATGATTGAGCTTTCGGACGGACAATGAATTTTTTCAAAAAGTCATTGCATTTAAACATGGGTAATTGTTTTAAATGACAAAACTGCTGGAAATATTTTCAAATATAGCAAAATGTCACTTTCTATTAGTGATAAACAACGATAGACATCTATCTGTGTCTATCACTGATAGACAGTGATAGATGATAGTAATCTATCCGTGTCTATCACTAATAAATAGTGATATATTTGCTATATTTGCAAATATTTTACCTTATTTTGCTATGTTTGAAAAAAATTCTTTAAACATTTGTTTTTCTAATTAAAACTGTTTAAAATACAAATATAAATGTGTTTTGTTACATTTTGTCAAAAGTGTTTTTATACACAATTTTTGTTTGGTTTGACTATGTGCTCAAAGTGTTTATATTAAGGTTAAATTATTATATAAGACGACTACTAAACACTATGAACTAATAATTTCAATTTTATATTTAAAAAAATACTTTCACCACCCTAGTTTTCTAAGTTTTTGTTTTTCTTTGAGTATATGATTGGCTGAGTTGGTCAGTAGAGTTATTTGTTGGATACGATCGATGAAGTTGGTGGTTGGAGTTGGTCACCGAAGGTAATCATCGAATTTGGGGCCCAAATGTGGTAGTCATGTGGAGTTGAAAATCAGAGGTGGCATTCGCACGAAGGTGGTGGTCGTTAGAGGTAGTTATTGGAGTTTGGTCGTTAGATGTAGTTATTGGAGTTTGGTCATTAGAGGTGGTCATCGAAGCATGTCATCGATGGTGGTTGTTGTCGGAGTTGAGCGTTGGAGGTGGTCATCGACGATGATCGTCATTAAAGTTAGTCGTCGGTAGTGGTCGATGGGTAGAGTCATTAAAAACATTGCAGGGAGGGAGATAGTAAGATAGAAAAATCTCTCGATAAATGTTTAAACTTCGATAGTAAACACTGTTGAAGTTAATGAAATTGAGTTATTGTACACGGATTTATGAAGTTGATGGGCCAATTACTTGAGTTGGTTTAAATCCAACTCAACTCAACCAAATTCAATGCTCCAAACACCTCTATGTGCAATTGAATGGATGCACAAACAATTGAAGCTAACAAAAATAATCAAAAGAAAATCAGAGTTTTTAAGATACAAAAAATTGCATAAAATATTTCTGATCGAATTCAACTCTCTACTCCAAACACATTTTTTTATTAACTCTAGAGACAATTTTTACATGCTCAATTTAACTCAACTCGTGAAATGTTTATTTATTTATTTAATTATTATTATTATTATTTTTCAAGTGTAGGGCTAAAACCCCAACATCACACATTGTACGTCCGCTCATTGATTAAAGTCCCTGGACTTTGTAAATCTCCGACCGACAAGACGGGGGTTTTCCTATCTCCATTTAACGCCTTTTTTTCACTCTTGGGGAAGTGTTATTGCTTCCTATCCTTACACGGAACGGAAGCTAATTACAACGTAATTCTCCGATTCCACTTTGATTCTGAAAATTTTCCGGTTGTAATTCTCTTCCGTTCGGTAGATCAGCCATTGATTCTTCCAACTATTCTCTTCCCAGATTACTGTATTCGTTTCTTTTCCATCTGTGAATTTCTCTGTTACTCCTGAAGCAGCCAGCAAAATGATCTCCATCTCTCTCTCCAATTCACATGCTCTCGCGCGGGCTTATCCTCATCATCTTCCTCACTCTCAGCGCCACCAACGGTGTCCCCGCCCTCTGCTTTCGTCCAATTCTCTTTCTAAGCTACAGCGGTTTGGGATCTCCGATCGATGCTCCGCTCGACCTCCCTTGCCTTTGGTTCTTGCTTCTTCTGGAGCTGGCGTCGTTGATTCCTTTCCGGTTTGTCATTTCTTTCTCACATTCTTTTCACTGCATTTGTTCTATTCAACTTCTTCACGGATACGTTTTTGTTTTTAGGTTATTTACTGGAAACGGGACTCTAAATACTGGTTTATTGTTATGTAGTGAATGAGGTGTTATCCTCTGACTTCCTTTATGTAACGAGTCTAGCTTAATTAAGATTTGCATGCCTGTGTTCTACGTGAATAACTATGAACATAACCGCACAAATTTGCTTTCATTTCGGTTGTGAAGTAATAGAGATATTATACTTTTCCTTGACGACGATTCATCCAAGGAAAAGAACCAGCACCGTCTAGATTATGCTGCAAAATTTTAGTATGGAACATAGAATCAAAGCAGACGCTCTAAAGTACTTATTAACAATTATCGGTCCTTTCCTTTTGGTGCTACTACATATATAGGATATAAGTTGTGTTTATTATATGTTCTGTTTTAGAGAGGGAGAGCTTGGGGAATTGACTAGTCTATGGCTATTTTAGACCTTCAGTTTTAAATTTCTGTTTGACTGCTTGGCTGTCGTGTTTCGCCCTTATTGTATCATGGTGATTTTCAGATAAGAGGAACATATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTTTATGTTGTTAAACCTACAACAACAGTGGATGAAGGTGCGGTTGATTGAGGGATTTAATTTTAATTATTTTGGTTAGAGTTGCTAATGATAATTGTTTAATTCATCGGCTTTTGTGGTTACAGCATTAGAGGTCCTGGTGGAAAAGAGAATAACTGGTTTTCCTGTTGTCGATGATGATTGGAATTTGGTAGAGTTTTTCCTTTCACCTTTTTGTGCTTCTCGCGAGTGTTTTTATCTTGTCATTGCCAACTTACTGTGGAAGTGAATTACCGAAGTCTGATGATATTCTTGTGGAGGGGACTGGGGAAGGGGTCTTCTGTTTGTTGTCAGTGTCACTGAGAATCTTGCAAAAAGTTTCAACATTATTTCTCATTTCGTTTTTTGAGGGGTTGGGGTGTATGTGCATCTATGGTCAAAGCATTACTGTTAAGGCAATTTACGTTAAGAATACTGGTAGTAAAGAATCCAAACTGCTATTGAAGCTGATTGATTACCATTTACGTTAAGAATACTGGTCGTAAAGAATCCAAACTGCTATTGAAGCTGATTGATTTCCCTTCTTTCTTAATAATTTGGTTTTGTGTTTTGCTGTGGCAGGTTGGAGTCGTCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTATTTTAACTTCTGATAGCACAGATTTCAACTTAAATCACCATTACATGAGGAATTGTTCTTGGCTTCTTGCATATTTTTCTGTTGAAATCAGATTTCTATCCCTTTTTATTTGTTAAGTTACTAGTAATTTTTTCTTATTCTTCTTATTTTAATTCTTAAATTTGAGATGCTTCCTTCAAATTATTTTTGTTTTCTGAGAGACCTGAAACATTTTTGAATGATTATTTGGAATGTGAACAGGAAATAAACATCAATTAAAATTTTACTGCCGGTTGAGTTGATTCATTGAACTTTATTTGATTCAAAGGTGGACAAGTAACAGAATGTTTTGCGGTTTTGTCTAAGCTGCAACTTTTCCAAAATATTTTTTTAAGCTTTCAGACAAATTTATTAATAGAAAAAATAGTCATCAGAAGTTGTTTAGTTTACTCTCTCTTGCTGGCCTCTGGAACTACATGCCTTCTCACGTCTTTATATGCATACAGTCTCTCAATCATAAATAAATTTCTTGCTCTCTTCTCCTTATAATTTGTTCTTCATCCCACATTTTTTTGCTGAACATGCACCCATATTTTCATTCCGCACATACATACATAAAATTCAGTCTCTCATTTCAGAATCTCTCTTTTGCTTTGCTTACTTTACTCACACTCATACCCTCCTTTGCAAAAATCTAGCATACAAACAAAAATTATTTGCAAAAATCTAGGAGTACAAGTTTTTGGATTACCTTGGTTCCATCATCATTCTCTGGATGGAAATTTGGTTGTGATGATGTTCAGCCATCCTCTTAAGAGGAAAGCAAAGAAACTTTGGATCAGTGCTAAGTCGACAATCTGAAGTATTTGTTGGGAAAGGGGAAAAATTATGTTGGGATACACTCGGGAGGCCTTATAAAAGCTAGAAATACAAATATGAAACAGTTGACGACTGATTTGCTCATTTGCTGATGGCTGTATGCAAAACCTGACAATAGCCATTGTTCTAGTATTTTGTCTATGTTACAATGAACATCTTTTGAGCAATAGTTGGAAACTGTTTTATGGATTCTGTAACTGTCAAGCTGATAGATAGTTCAATGCCTCATGTTTATTAATATGTGGTCATACCTCGTCAATCATTTTCTTTGTATTTTATTATATTCCGTTTATTTCATTGCTTCTCTTACTCAATAATGTTTTCCTCCTATTATTGGCAATTAGGTGGTACTCAAAGTGATACCAATCTGTTCCCTGATGTGGATAGTTCGTGGAAAGTATGTAAGCAATGCCATTTATCATCTGGTTATTTGCTTTTCTTTTGTTTCGCAAACATGAGGGATGTTAAGAAAATGCAATGACTCAGCAAACCTGACCAATACAACCAAACTTTTTGGATTGGTTTTCAGCTATTTGAACCCAAATCCTAATCCTAATAAATTGAAGATTTGTCCATAATTTTTTAATTTATCCTAATCCTACCACATCATGTTGAAATAAATAACTTGAGCTTATTATTATTTTTATTAGAGAAAAAATAAGTTCCATGTCTAATAGCCTAACCCAACCAAAATATTACTCAAGCCGGATTGGGGTTTCACTCTCATCTGATCAGGTTTATTTGGTTGGACAAATTTGCAACTGATAATTTGTGTTGGGTTCAGAATGTCTCTTAACTCAATTTATTGCACGAACACATTCAGTAGTTTACATATAGGTGATTTTTCCCGTTTTCCATAGTTCTCCTTTTCTTTTTGGGATTTTGTATAAAGCCAGAAATTAGCTCTAACATTGACAGCCCTTGTTTAAGTAAAATCTTTTGGAGAAAGAGTCGCAGGCATTAGCTCTGCCATCGACATTATTTGATTAAGTAAATTATATAGAGAAAGAAGAGCCACGGAATTTAGCTCTGCCAATGACATCCCTTTATTAAGTAAAATTCCTTGAAGAAAGAAGAATCACATGATCATCATCACCGTGAATTATGTGGATCGGTGGTTCACCGCCATCTTTTAATTTTAAAAAAATGATAGAAGTATATTTTTGCTGAATATGGTGGCAGACATTCAATGAGATCCAGAAACTGCTCAGTAAAACAAATGGTAAAGTTGTTGGCGACCTGATGACATCTGCTCCACTAGCCGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAAGTAATCATTTTATATCTCTCTCTTCTGCATTATTTTACAATCTAGATCTACATAATCCATGGTTTCTTCAATGTTTCGACCTAGATATTTAATCAATTATTCTTTTTAAGTATGCAATTTCATTTTATTAGACTTTTTATGTACATTCTTGAAAAATAAAAAACTAGTTTTTTTTTCTCTTTTTGTAACTGTTATTTCTTAAAGATTATGATGTGCGGGTGTCCATGTTATTCCGTAACAAGCATCATACTTCTCTGTCGTTCATTCTGTGTACATCAGATGTGCAAAAATTTTCCATCTTCCAAAAAAACAACGCTTAAGTGACACATTTTAGAGAGAAAAGACTGCGGAATAAAAAAATTTACTCATTTTTTTACAAGTTAATCTGTGGCTACCAAGGTTTGAAACTATCTATTGTTTATAGGTTGTTGCTCGAAACAAAATATCGCCGATTGCCAGTAGTAGATGCAGATGGCAAGCTGGTAGGAATATTTCTTTTTCTTTCCTATTCTATTCTTCCTTAAAGTGCAATAAATTTTAAAATCTCCGTCAATCTTAGTTGCTTCTGTTTAAATGTTAAAGGTGGGGATCATTACTAGGGGAAATGTCGTTAGAGCTGCTTTGCAGATAAAACGTGCTGCTGAAAGGTCGACATAATTCTGGAAACATCGACTGGCGTCGCTCTGAGGTAAAACGCTACCAGAAAGCTATAGCATTATTTGTAGATGATGAATGTAGTTAGTATCTTATAGCTTACACAGGGTTTGGATTGTTACAATTTACCTGAAGTTGTGGATTCCGTGCTGAAGTAAACTAGAGCTTTGAAGGGAAGTTTATTGATTCTCTAAGATTCTTTCTTCCCAATATCCTAACTAAGAAATGTTGGTCTATGTCAATATTTGGGTATTCCCAGCATTTCAGGTCAGCCCACTGTAAGATTTCTCTATTAAGTTCGTCATTATAGTTTGGGACCTCATTGTTTAAATTTTGCCTAAACATTTTGAATATAATTAGCATCTTTTTACTTCTTTCGAAA

mRNA sequence

ATGAAAATTGTAGGGCTAAAACCCCAACATCACACATTGTACGTCCGCTCATTGATTAAAGTCCCTGGACTTTGTAAATCTCCGACCGACAAGACGGGGGTTTTCCTATCTCCATTTAACGCCTTTTTTTCACTCTTGGGGAAGTGTTATTGCTTCCTATCCTTACACGGAACGGAAGCTAATTACAACGTAATTCTCCGATTCCACTTTGATTCTGAAAATTTTCCGGTTGTAATTCTCTTCCGTTCGATTACTGTATTCGTTTCTTTTCCATCTGTGAATTTCTCTGTTACTCCTGAAGCAGCCAGCAAAATGATCTCCATCTCTCTCTCCAATTCACATGCTCTCGCGCGGGCTTATCCTCATCATCTTCCTCACTCTCAGCGCCACCAACGGTGTCCCCGCCCTCTGCTTTCGTCCAATTCTCTTTCTAAGCTACAGCGGTTTGGGATCTCCGATCGATGCTCCGCTCGACCTCCCTTGCCTTTGGTTCTTGCTTCTTCTGGAGCTGGCGTCGTTGATTCCTTTCCGATAAGAGGAACATATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTTTATGTTGTTAAACCTACAACAACAGTGGATGAAGGTGCGGTTGGAGTCGTCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTGGTACTCAAAGTGATACCAATCTGTTCCCTGATGTGGATAGTTCGTGGAAAGTATGTAAGCAATGCCATTTATCATCTGGTTATTTGCTTTTCTTTTGTTTCGCAAACATGAGGGATGTTAAGAAAATGCAATGACTCAGCAAACCTGACCAATACAACCAAACTTTTTGGATTGGTTTTCAGCTATTTGAACCCAAATCCTAATCCTAATAAATTGAAGATTTGTCCATAATTTTTTAATTTATCCTAATCCTACCACATCATGTTGAAATAAATAACTTGAGCTTATTATTATTTTTATTAGAGAAAAAATAAGTTCCATGTCTAATAGCCTAACCCAACCAAAATATTACTCAAGCCGGATTGGGGTTTCACTCTCATCTGATCAGGTTTATTTGGTTGGACAAATTTGCAACTGATAATTTGTGTTGGGTTCAGAATGTCTCTTAACTCAATTTATTGCACGAACACATTCAGTAGTTTACATATAGGTGATTTTTCCCGTTTTCCATAGTTCTCCTTTTCTTTTTGGGATTTTGTATAAAGCCAGAAATTAGCTCTAACATTGACAGCCCTTGTTTAAGTAAAATCTTTTGGAGAAAGAGTCGCAGGCATTAGCTCTGCCATCGACATTATTTGATTAAGTAAATTATATAGAGAAAGAAGAGCCACGGAATTTAGCTCTGCCAATGACATCCCTTTATTAAGTAAAATTCCTTGAAGAAAGAAGAATCACATGATCATCATCACCGTGAATTATGTGGATCGGTGGTTCACCGCCATCTTTTAATTTTAAAAAAATGATAGAAGTATATTTTTGCTGAATATGGTGGCAGACATTCAATGAGATCCAGAAACTGCTCAGTAAAACAAATGGTAAAGTTGTTGGCGACCTGATGACATCTGCTCCACTAGCCGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAAGTTGTTGCTCGAAACAAAATATCGCCGATTGCCAGTAGTAGATGCAGATGGCAAGCTGGTGGGGATCATTACTAGGGGAAATGTCGTTAGAGCTGCTTTGCAGATAAAACGTGCTGCTGAAAGGTCGACATAATTCTGGAAACATCGACTGGCGTCGCTCTGAGGTAAAACGCTACCAGAAAGCTATAGCATTATTTGTAGATGATGAATGTAGTTAGTATCTTATAGCTTACACAGGGTTTGGATTGTTACAATTTACCTGAAGTTGTGGATTCCGTGCTGAAGTAAACTAGAGCTTTGAAGGGAAGTTTATTGATTCTCTAAGATTCTTTCTTCCCAATATCCTAACTAAGAAATGTTGGTCTATGTCAATATTTGGGTATTCCCAGCATTTCAGGTCAGCCCACTGTAAGATTTCTCTATTAAGTTCGTCATTATAGTTTGGGACCTCATTGTTTAAATTTTGCCTAAACATTTTGAATATAATTAGCATCTTTTTACTTCTTTCGAAA

Coding sequence (CDS)

ATGAAAATTGTAGGGCTAAAACCCCAACATCACACATTGTACGTCCGCTCATTGATTAAAGTCCCTGGACTTTGTAAATCTCCGACCGACAAGACGGGGGTTTTCCTATCTCCATTTAACGCCTTTTTTTCACTCTTGGGGAAGTGTTATTGCTTCCTATCCTTACACGGAACGGAAGCTAATTACAACGTAATTCTCCGATTCCACTTTGATTCTGAAAATTTTCCGGTTGTAATTCTCTTCCGTTCGATTACTGTATTCGTTTCTTTTCCATCTGTGAATTTCTCTGTTACTCCTGAAGCAGCCAGCAAAATGATCTCCATCTCTCTCTCCAATTCACATGCTCTCGCGCGGGCTTATCCTCATCATCTTCCTCACTCTCAGCGCCACCAACGGTGTCCCCGCCCTCTGCTTTCGTCCAATTCTCTTTCTAAGCTACAGCGGTTTGGGATCTCCGATCGATGCTCCGCTCGACCTCCCTTGCCTTTGGTTCTTGCTTCTTCTGGAGCTGGCGTCGTTGATTCCTTTCCGATAAGAGGAACATATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTTTATGTTGTTAAACCTACAACAACAGTGGATGAAGGTGCGGTTGGAGTCGTCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTGGTACTCAAAGTGATACCAATCTGTTCCCTGATGTGGATAGTTCGTGGAAAGTATGTAAGCAATGCCATTTATCATCTGGTTATTTGCTTTTCTTTTGTTTCGCAAACATGAGGGATGTTAAGAAAATGCAATGA

Protein sequence

MKIVGLKPQHHTLYVRSLIKVPGLCKSPTDKTGVFLSPFNAFFSLLGKCYCFLSLHGTEANYNVILRFHFDSENFPVVILFRSITVFVSFPSVNFSVTPEAASKMISISLSNSHALARAYPHHLPHSQRHQRCPRPLLSSNSLSKLQRFGISDRCSARPPLPLVLASSGAGVVDSFPIRGTYTVGDFMTRKENLYVVKPTTTVDEGAVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKVCKQCHLSSGYLLFFCFANMRDVKKMQ
BLAST of Lsi05G002270 vs. Swiss-Prot
Match: CBSX1_ARATH (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-17
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1

Query: 142 SLSKLQRFGISDRCSARPPLPLVLASSGAGVV--DSFPIRGTYTVGDFMTRKENLYVVKP 201
           S+    +F  S    ++  +P   +++G+ ++   S P  G YTVG+FMT+KE+L+VVKP
Sbjct: 33  SVQPCHKFTFSRSFPSKSRIPSASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKP 92

Query: 202 TTTVDEGA--------------------VGVVSDYDLLALDSISGGTQSDTNLFPDVDSS 242
           TTTVDE                      VG+VSDYDLLALDSISG  +++ ++FP+VDS+
Sbjct: 93  TTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDST 152

BLAST of Lsi05G002270 vs. Swiss-Prot
Match: CBSX2_ARATH (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17
Identity = 71/159 (44.65%), Postives = 86/159 (54.09%), Query Frame = 1

Query: 105 MISISLSNSHALARAYPHHLPHSQRHQRCPRPLLSSNSLSKLQRFGISDRCSARPPLPLV 164
           M SISLSNS  + R     L  S  HQ       SS SL  L     S   S    +   
Sbjct: 1   MGSISLSNSMPITRL---PLLTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAF 60

Query: 165 LAS-SGAGVVDSFPIR-GTYTVGDFMTRKENLYVVKPTTTVDEGA--------------- 224
            A+ +     +S P + G YTVGDFMT ++NL+VVKP+T+VD+                 
Sbjct: 61  FAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVID 120

Query: 225 -----VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK 242
                VGVVSDYDLLALDSISG +Q+DTNLFPDVDS+WK
Sbjct: 121 DNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 156

BLAST of Lsi05G002270 vs. TrEMBL
Match: A0A0A0L716_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G202220 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 9.3e-58
Identity = 123/157 (78.34%), Postives = 125/157 (79.62%), Query Frame = 1

Query: 105 MISISLSNSHALARAYPHHLPHSQRHQRCPRPLLSSNSLSKLQRFGISDRCSARPPLPLV 164
           M SISLSNSH LAR YPHHLPHS R Q C RPLLS+NSLSKL RFGISDR  ARPPLPLV
Sbjct: 1   MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLV 60

Query: 165 LASSGAGVVDSFPIRGTYTVGDFMTRKENLYVVKPTTTVDEGA----------------- 224
           LASSGAGVVDSFP+RGTYTVGDFMTRKENLYVVKPTTTVDE                   
Sbjct: 61  LASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDD 120

Query: 225 ---VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK 242
              VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK
Sbjct: 121 WNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK 157

BLAST of Lsi05G002270 vs. TrEMBL
Match: W9S667_9ROSA (CBS domain-containing protein CBSX1 OS=Morus notabilis GN=L484_027493 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.8e-24
Identity = 81/147 (55.10%), Postives = 87/147 (59.18%), Query Frame = 1

Query: 124 LPHSQRHQRCPRPLL------SSNSLSKLQRFGISDRCSA--RPPLPLVLASSGAGVVDS 183
           L   Q H R P P L       S  L + +RF  SDR S   RPP   + ASSGA V +S
Sbjct: 12  LSRLQHHNR-PLPSLLLFPAHQSRKLLQRRRFDASDRFSRSLRPP---IAASSGAHVANS 71

Query: 184 FPIRG-TYTVGDFMTRKENLYVVKPTTTVDEGA--------------------VGVVSDY 242
            P R  TYTVGDFMTRKENL VVKPTTTVDE                      VGVVSDY
Sbjct: 72  VPSRNKTYTVGDFMTRKENLLVVKPTTTVDEALETLVEKRITGFPVIDDDWKLVGVVSDY 131

BLAST of Lsi05G002270 vs. TrEMBL
Match: A0A059AMU6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01128 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.8e-22
Identity = 61/104 (58.65%), Postives = 72/104 (69.23%), Query Frame = 1

Query: 163 LVLASSGAGVVDSFPIR-GTYTVGDFMTRKENLYVVKPTTTVDEGA-------------- 222
           + +A++GA V +S P R G+YTVGDFMTRKE+L+VVK TTTVDE                
Sbjct: 59  VTVAAAGASVTNSVPPRNGSYTVGDFMTRKEDLHVVKATTTVDEALEMLVEKRITGFPVI 118

Query: 223 ------VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKVCKQ 246
                 VGVVSDYDLLALDSISGG Q D N+FPDVDSSWKVC++
Sbjct: 119 DDEWNLVGVVSDYDLLALDSISGGAQGDANIFPDVDSSWKVCRR 162

BLAST of Lsi05G002270 vs. TrEMBL
Match: M5VMP1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010834mg PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.8e-22
Identity = 73/129 (56.59%), Postives = 81/129 (62.79%), Query Frame = 1

Query: 140 SNSLSKLQRFGISDRCSARPPL---PLVLASSGAGVV-DSFPIRGTYTVGDFMTRKENLY 199
           S+SL  L+RF +      R  L   PLVLASS AGV  +S P  GT+TVGDFMT KE L+
Sbjct: 26  SSSLLPLRRFPLLALSKRRRSLQFRPLVLASSAAGVASNSLPRNGTFTVGDFMTTKEYLH 85

Query: 200 VVKPTTTVDEGA--------------------VGVVSDYDLLALDSISG---GTQSDTNL 242
           VVKP+TTVD+                      VGVVSDYDLLALDSISG   G QSDTNL
Sbjct: 86  VVKPSTTVDQALDALVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGNIKGGQSDTNL 145

BLAST of Lsi05G002270 vs. TrEMBL
Match: A0A059AMD8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01128 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.3e-22
Identity = 62/104 (59.62%), Postives = 71/104 (68.27%), Query Frame = 1

Query: 163 LVLASSGAGVVDSFPIR-GTYTVGDFMTRKENLYVVKPTTTVDEGA-------------- 222
           + +A++GA V +S P R G+YTVGDFMTRKE+L+VVK TTTVDE                
Sbjct: 59  VTVAAAGASVTNSVPPRNGSYTVGDFMTRKEDLHVVKATTTVDEALEMLVEKRITGFPVI 118

Query: 223 ------VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKVCKQ 246
                 VGVVSDYDLLALDSISGG Q D N+FPDVDSSWKVC Q
Sbjct: 119 DDEWNLVGVVSDYDLLALDSISGGAQGDANIFPDVDSSWKVCFQ 162

BLAST of Lsi05G002270 vs. TAIR10
Match: AT4G36910.1 (AT4G36910.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 92.0 bits (227), Expect = 5.8e-19
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1

Query: 142 SLSKLQRFGISDRCSARPPLPLVLASSGAGVV--DSFPIRGTYTVGDFMTRKENLYVVKP 201
           S+    +F  S    ++  +P   +++G+ ++   S P  G YTVG+FMT+KE+L+VVKP
Sbjct: 33  SVQPCHKFTFSRSFPSKSRIPSASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKP 92

Query: 202 TTTVDEGA--------------------VGVVSDYDLLALDSISGGTQSDTNLFPDVDSS 242
           TTTVDE                      VG+VSDYDLLALDSISG  +++ ++FP+VDS+
Sbjct: 93  TTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDST 152

BLAST of Lsi05G002270 vs. TAIR10
Match: AT4G34120.1 (AT4G34120.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 91.7 bits (226), Expect = 7.6e-19
Identity = 71/159 (44.65%), Postives = 86/159 (54.09%), Query Frame = 1

Query: 105 MISISLSNSHALARAYPHHLPHSQRHQRCPRPLLSSNSLSKLQRFGISDRCSARPPLPLV 164
           M SISLSNS  + R     L  S  HQ       SS SL  L     S   S    +   
Sbjct: 1   MGSISLSNSMPITRL---PLLTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAF 60

Query: 165 LAS-SGAGVVDSFPIR-GTYTVGDFMTRKENLYVVKPTTTVDEGA--------------- 224
            A+ +     +S P + G YTVGDFMT ++NL+VVKP+T+VD+                 
Sbjct: 61  FAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVID 120

Query: 225 -----VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK 242
                VGVVSDYDLLALDSISG +Q+DTNLFPDVDS+WK
Sbjct: 121 DNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 156

BLAST of Lsi05G002270 vs. NCBI nr
Match: gi|659112269|ref|XP_008456144.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58
Identity = 125/157 (79.62%), Postives = 126/157 (80.25%), Query Frame = 1

Query: 105 MISISLSNSHALARAYPHHLPHSQRHQRCPRPLLSSNSLSKLQRFGISDRCSARPPLPLV 164
           M SISLSNSHALAR YPHHLPHS R Q C RPLLSSNSLSKL RFGISDR  ARPPLPLV
Sbjct: 1   MTSISLSNSHALARPYPHHLPHSHRQQWCSRPLLSSNSLSKLHRFGISDRFPARPPLPLV 60

Query: 165 LASSGAGVVDSFPIRGTYTVGDFMTRKENLYVVKPTTTVDEGA----------------- 224
           LASSGAGVVDSFP+RGTYTVGDFMTRKENLYVVKPTTTVDE                   
Sbjct: 61  LASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDD 120

Query: 225 ---VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK 242
              VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK
Sbjct: 121 WNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK 157

BLAST of Lsi05G002270 vs. NCBI nr
Match: gi|449445894|ref|XP_004140707.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 123/157 (78.34%), Postives = 125/157 (79.62%), Query Frame = 1

Query: 105 MISISLSNSHALARAYPHHLPHSQRHQRCPRPLLSSNSLSKLQRFGISDRCSARPPLPLV 164
           M SISLSNSH LAR YPHHLPHS R Q C RPLLS+NSLSKL RFGISDR  ARPPLPLV
Sbjct: 1   MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLV 60

Query: 165 LASSGAGVVDSFPIRGTYTVGDFMTRKENLYVVKPTTTVDEGA----------------- 224
           LASSGAGVVDSFP+RGTYTVGDFMTRKENLYVVKPTTTVDE                   
Sbjct: 61  LASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDD 120

Query: 225 ---VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK 242
              VGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK
Sbjct: 121 WNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWK 157

BLAST of Lsi05G002270 vs. NCBI nr
Match: gi|1009150146|ref|XP_015892863.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-24
Identity = 74/129 (57.36%), Postives = 84/129 (65.12%), Query Frame = 1

Query: 134 PRPLLSSNSLSKLQRFGISDRCSARPPLPLVLASSGAGVVDSFPIR-GTYTVGDFMTRKE 193
           PRPL    SLS   R   S   S   P   V+ASSG+ VV+S P R GTYTVGDFMT+K+
Sbjct: 48  PRPLPIPPSLSTRHRLTSSRGFSGNRP-SAVVASSGSHVVNSLPPRNGTYTVGDFMTKKD 107

Query: 194 NLYVVKPTTTVDEGA--------------------VGVVSDYDLLALDSISGGTQSDTNL 242
           NL+VVKP+TTVDE                      VGVVSDYDLLALDSISGG+Q+DTNL
Sbjct: 108 NLHVVKPSTTVDEALQALVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGSQNDTNL 167

BLAST of Lsi05G002270 vs. NCBI nr
Match: gi|703143017|ref|XP_010107905.1| (CBS domain-containing protein CBSX1 [Morus notabilis])

HSP 1 Score: 119.0 bits (297), Expect = 1.3e-23
Identity = 81/147 (55.10%), Postives = 87/147 (59.18%), Query Frame = 1

Query: 124 LPHSQRHQRCPRPLL------SSNSLSKLQRFGISDRCSA--RPPLPLVLASSGAGVVDS 183
           L   Q H R P P L       S  L + +RF  SDR S   RPP   + ASSGA V +S
Sbjct: 12  LSRLQHHNR-PLPSLLLFPAHQSRKLLQRRRFDASDRFSRSLRPP---IAASSGAHVANS 71

Query: 184 FPIRG-TYTVGDFMTRKENLYVVKPTTTVDEGA--------------------VGVVSDY 242
            P R  TYTVGDFMTRKENL VVKPTTTVDE                      VGVVSDY
Sbjct: 72  VPSRNKTYTVGDFMTRKENLLVVKPTTTVDEALETLVEKRITGFPVIDDDWKLVGVVSDY 131

BLAST of Lsi05G002270 vs. NCBI nr
Match: gi|645261840|ref|XP_008236486.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Prunus mume])

HSP 1 Score: 114.0 bits (284), Expect = 4.0e-22
Identity = 73/129 (56.59%), Postives = 82/129 (63.57%), Query Frame = 1

Query: 140 SNSLSKLQRF---GISDRCSARPPLPLVLASSGAGVV-DSFPIRGTYTVGDFMTRKENLY 199
           S+SL  L+RF    +S R  +    PLVLASS  GV  +S P  GT+TVGDFMT KE+L+
Sbjct: 26  SSSLLPLRRFPHLALSKRRRSLQFRPLVLASSAPGVAANSLPRNGTFTVGDFMTTKEHLH 85

Query: 200 VVKPTTTVDEGA--------------------VGVVSDYDLLALDSISG---GTQSDTNL 242
           VVKPTTTVD+                      VGVVSDYDLLALDSISG   G QSDTNL
Sbjct: 86  VVKPTTTVDQALDALVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGNIKGGQSDTNL 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CBSX1_ARATH1.0e-1741.80CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CB... [more]
CBSX2_ARATH1.3e-1744.65CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CB... [more]
Match NameE-valueIdentityDescription
A0A0A0L716_CUCSA9.3e-5878.34Uncharacterized protein OS=Cucumis sativus GN=Csa_3G202220 PE=4 SV=1[more]
W9S667_9ROSA8.8e-2455.10CBS domain-containing protein CBSX1 OS=Morus notabilis GN=L484_027493 PE=4 SV=1[more]
A0A059AMU6_EUCGR4.8e-2258.65Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01128 PE=4 SV=1[more]
M5VMP1_PRUPE4.8e-2256.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010834mg PE=4 SV=1[more]
A0A059AMD8_EUCGR6.3e-2259.62Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01128 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G36910.15.8e-1941.80 Cystathionine beta-synthase (CBS) family protein[more]
AT4G34120.17.6e-1944.65 Cystathionine beta-synthase (CBS) family protein[more]
Match NameE-valueIdentityDescription
gi|659112269|ref|XP_008456144.1|1.2e-5879.62PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo... [more]
gi|449445894|ref|XP_004140707.1|1.3e-5778.34PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sati... [more]
gi|1009150146|ref|XP_015892863.1|2.5e-2457.36PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like isoform X1 [Z... [more]
gi|703143017|ref|XP_010107905.1|1.3e-2355.10CBS domain-containing protein CBSX1 [Morus notabilis][more]
gi|645261840|ref|XP_008236486.1|4.0e-2256.59PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005575 cellular_component
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G002270.1Lsi05G002270.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11911INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATEDcoord: 177..241
score: 4.8
NoneNo IPR availablePANTHERPTHR11911:SF109SUBFAMILY NOT NAMEDcoord: 177..241
score: 4.8

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G002270Csa3G202220Cucumber (Chinese Long) v2culsiB211
Lsi05G002270Csa7G073520Cucumber (Chinese Long) v2culsiB527
Lsi05G002270CSPI03G18300Wild cucumber (PI 183967)cpilsiB209
Lsi05G002270CSPI07G07500Wild cucumber (PI 183967)cpilsiB541
Lsi05G002270Cucsa.244520Cucumber (Gy14) v1cgylsiB404
Lsi05G002270CmaCh04G004800Cucurbita maxima (Rimu)cmalsiB690
Lsi05G002270CmaCh11G017380Cucurbita maxima (Rimu)cmalsiB127
Lsi05G002270CmaCh16G003500Cucurbita maxima (Rimu)cmalsiB316
Lsi05G002270CmoCh16G003740Cucurbita moschata (Rifu)cmolsiB304
Lsi05G002270CmoCh11G013770Cucurbita moschata (Rifu)cmolsiB116
Lsi05G002270CmoCh04G005150Cucurbita moschata (Rifu)cmolsiB683
Lsi05G002270Cla016025Watermelon (97103) v1lsiwmB380
Lsi05G002270Cla013086Watermelon (97103) v1lsiwmB361
Lsi05G002270MELO3C018463Melon (DHL92) v3.5.1lsimeB346
Lsi05G002270MELO3C019527Melon (DHL92) v3.5.1lsimeB368
Lsi05G002270ClCG02G006090Watermelon (Charleston Gray)lsiwcgB330
Lsi05G002270MELO3C019527.2Melon (DHL92) v3.6.1lsimedB384
Lsi05G002270Cla97C02G033040Watermelon (97103) v2lsiwmbB326
Lsi05G002270Cla97C05G092560Watermelon (97103) v2lsiwmbB329
Lsi05G002270Bhi05G000939Wax gourdlsiwgoB458
Lsi05G002270Bhi01G001269Wax gourdlsiwgoB431
Lsi05G002270Cp4.1LG14g04200Cucurbita pepo (Zucchini)cpelsiB177
Lsi05G002270Cp4.1LG01g02330Cucurbita pepo (Zucchini)cpelsiB369
Lsi05G002270CsGy3G018150Cucumber (Gy14) v2cgyblsiB198
Lsi05G002270CsGy7G007070Cucumber (Gy14) v2cgyblsiB496
Lsi05G002270Carg19658Silver-seed gourdcarlsiB270
Lsi05G002270Carg08149Silver-seed gourdcarlsiB346
Lsi05G002270Carg26400Silver-seed gourdcarlsiB737
Lsi05G002270CsaV3_7G008450Cucumber (Chinese Long) v3cuclsiB562
Lsi05G002270CsaV3_3G018360Cucumber (Chinese Long) v3cuclsiB230
The following gene(s) are paralogous to this gene:

None