Carg19658 (gene) Silver-seed gourd

Overview
NameCarg19658
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCBS domain-containing protein CBSX1, chloroplastic-like
LocationCucurbita_argyrosperma_scaffold_133 : 4827 .. 8888 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCCATTTAACCCGCGTTTCATTGGGAAAGTGTCGCTTCCTTTCCTTGCACGGAACGGAAGTCAATTACAACCTAATTTTTCGATTCCTCTTTGATTTCGAAGATTTCCGGTTGTAATTTTCTTCCGTCCGGTAGATCAGCCATTGATTCTTCCAACTATTCTCTTCCCAGAGTATTGTAATCGGTTCTCCATCTGTGGAATTCTCAGCTACTCGTCAAGCACCAAGCAAAATGAGCTCCATCTCGCTCTCCAATTCACATGCTCTGCCGCGGGCTTATCCTCATCATCTTTGCCACTCTCAGCCGCATCCATGCCGTCGCCAGCCTCTGCCTTCGTCTAATTCTCTTTCTAAGCTGCAGCGGTTTGGGATCTCCGATCGATATTCCTCTCGACCTCCATTGCCGTTGGTTCCTGCTTCTTCTGGAGCTGGCGTCGTCGGCTCCTTTCCGGTTTGTCATTTCTTTTCCACGTTATTTTGGCTGCATTTGTTCTATTCATCTTCACGTTTACGTTACTGTCTTTAGGTTATCTACTGAAAACGGGACTCTATGTGCTGGTTTAATGTCGCTTAATTAAGATTTCTATGTTTGTTCTGCATGAACACGTATGAAAATAACCGCAGAAATATGCTGCCATTTCGGCTGTGAAGAAATGAGATTACGCTTCTGCTTGTTGACGATTCATCGAAGGGAAATAATCAGCACCGTCTACGAGTATGCTGCAAAATTGTTAGAATGGAAAATAGAACCAAATCAGACGCCTCGAAAATACTTATTAACAACATATATGTTATTTTTGTTTATATATTTTGTTTTAGAGACGAGGATTTTGGGGAATTAACTTGTCTATGGCTATTTTAGGCCTTCTGTTTTATACTTCTGTTTGACTGCTTGGCCGTCCGTATTTAGCTCTTATCACGGTGATTTCAGATCAGAGGAACGTATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTTTATGTTGTTAAGCCTACAACAACAGCTGATGAAGGTGCGGTTGATTTAGTGCTTTAATTTTAATTATTTGCATTAGTGTTACTAATGATAATTGTTTAATTCATCGGCTTTTGTGATTACAGCATTAGAGGCCTTGGTGGAGAAGAGAATAACTGGTTTTCCTGTTGTTGATGAAGATTGGAATTTGGTAGAGTTTTTCCTTTCACCCTTTTGTGCTTCCCGTGAGTGTTTTTATATTGCCATTGCCAACTTACTGTGGAAGTGAATTACCGAAGTCCGTTGATGTTCTTGCGGAGGGTACTGGGGAAGGGGCCTTCGGTTTGTTGTCACTGAGAATCTTGCAAAAAATATCAACATTGTACTGTCATTTTTCATTTCGTTTTTGTGGAGTTGTGGTGAATGTGCATCTATGGTCGAAGGGTTACCCTTAAGCCATGTCAGGAAGTTAGTCCACCAACGTTTAGATTACTTGCTGTCAAGAATCCAAACTACTATTGAATCCAATTACCTGCTGTACTCAATAATTTGATTTAGTGCTTTGCTGTGGCAGGTCGGAGTCATCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTATTTCAACTTAAATCACTAATACTTGAAGAATTCTTCTTGTATACTTTCTGACTGAAATCGGGTTTCTATCCTTCTTTATTTGTTGATTACTAATACTTTTTTTATTCTTATTTTGATTCCTAAGAATCTTCCTTCAAATCATTTTTGTTTTCTAGAGACCAAACATTTCCCAGTCATATGCATTGAAACATTTAGAATGAACATTTGCTATGTGAACAGGATATAAACAACAATTAAACTTTTTTACCGTTGATTAAGTTGATTCATCGAACTCTATTTTGATGCAAAGGTGGACAAGTGACAACATGTTTTACTGTTTGCATGTTATCGATTATGTTCTTGTTTGATAATGTTATTTTTGTCTAGCAACAACTTTTCCAAAATATTTTTGAACTTAGACAAGTTTAAAAGTACGAAAAATAGTCATTAGAAGTTGTTTAGCTCACTCTCCCTTGCTGGACTCTGAAGGCAAAATTACATTTTCTTTATATTTTATTGTGTTCCATTATTCCATTGCTTCTCTTAATCTTTCCCCCCTGTTATTGACAATTAGGTGGTACTCAAAGCGATACCAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAGTATGTAAGCAATGTCATTTACTTTCTGGTTATTTGCTTCTTCTTTTTTTTTTTTTCTTGTTTGGCAAACATGAGTGATGTTTAAGAAGACAATTACTCAGAAAACTCAATCAATCAACCAAATTGGTTGGGTTGGGTTTCAGCTATTTGAACCCAAATTATCAGAAAGATTTTTTTTAGTATTTATTTTTTACTCGAAAATATTGTTCGATTGATCCTTGGAGTACTAATTCGGTATGTTGAGATCCTTTGTTTAAGTAACATCTTTCGGAGAAAGAGGAGTCTCAGGAATTAGCTCTGCCATTGACATCCCTTGACTAAGTAAAATTATACAGAGAAAGAAGACTCGTTGAATTTAGCTCTGTTATTGGCATCCCTTTATTCCTTAAAATTCATTGGAGGAAGAATAGAGTCATGATCACCACTGTTTTTAAATTAAAAAAAAATGATGAAAGTATATTTTTGCTGAATATGGTGGCAGACATTCAATGAGTTACAGAAACTTCTCTGTAAAACAAATGGTAAAGTTGTTGGCGACCTGATGACGCCTGCTCCGCTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTAATCCTTTTATTTCTCTCTCTTCTGCATTGTTATACTATCTGAATCTATATAATCCATGGTTTCTTCAATGTTTCAACCTAAACATTTAATCAAATTTTCTTTTTAAGTATGCAATTTCATTTAATTAGACTGTTTATATTCTTAGAAAAAAAGACTAGTTTTTTTTCTCCTTTTTTGCAACTGCTACTTCTTAGAGATTTTGATGTGCGGGTGTCCATGTTATTCTCCTCTGTAGTTCGTTCTGTTTCAAACTTTTGTTCGTTCTTTTTCAAACTTTTTCATTCTGTGTACATAAGCTGTGCAAAAAGCTTCCAATTTCCAAAAAAAACAACGCTTAGATGACACATTTTAGGGAGAAAAGACTGCAGAATCAAGAATTTACCCATTTTTATAAGTTAATCTGTGGCTACCGAAGTCTGAAACTATCGATTGTTTAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCGGTAGTAGATGCAGATGGCAAGCTGGTAGGAATTTTTCTTTAAACCATCTTAACTTCTTAAAGCTCCCTCGGTAATAGGCAACCATCTCAGTTGCTTGTGTTTGAATGTTAAAGGTGGGGATCATTACTAGGGGAAATGTCGTTAGAGCTGCGTTGCAGATAAAACGTGCTGCTGAAAGTTCGACATAATTCTGGGAACGTTGGCTGGTTGGCTGGTGTCGCTTTGTGGTAAGGTAAACATGCTATTCAAAAGCTTAGCATTGATTTGTAGATCTTGAATATAGTATATATATAATAGTTTGCTTTAAAGGGAAGTTTATTGTTGTTCTAAGATTCTTCTTCCCAGTTTCCTAACTGAGAAATGTTGGTCTATTGCAACTTTTATTTATCCCAGCATGTCAGGTCAGTCCACTGTATGATTTCTCTATTAAGTTAGTCATATTACTGTTTAAATTTCCCTAAACATTTTGAATATAATTAGTGAGTATTTTTCTACTTCATTAGGAAGGATCTTGTGAGATTTTCCTGTATCCTTTTGATCGAGAATATTTCTTTAAACTAATTAAACTATGTTCATGTCAACCGAGTTTTGAAGTTCATGTTTATATCGGCTGAATTTTGATGATCTGAACTTAAGTATGCAAAATAAATTATTCTATATGAACCAAGAGACGTCAATTATACAATATACTTCAATGAAGATGTGAAGAAAATATTGTTGAAATTAAGATATTTCAATTCATGCTACATTGAAGAAGAATGAAGTTTCATGTTATAAATTTTGGGCGAATTACAATTTAGA

mRNA sequence

TCTCCATTTAACCCGCGTTTCATTGGGAAAGTGTCGCTTCCTTTCCTTGCACGGAACGGAAGTCAATTACAACCTAATTTTTCGATTCCTCTTTGATTTCGAAGATTTCCGGTTGTAATTTTCTTCCGTCCGGTAGATCAGCCATTGATTCTTCCAACTATTCTCTTCCCAGAGTATTGTAATCGGTTCTCCATCTGTGGAATTCTCAGCTACTCGTCAAGCACCAAGCAAAATGAGCTCCATCTCGCTCTCCAATTCACATGCTCTGCCGCGGGCTTATCCTCATCATCTTTGCCACTCTCAGCCGCATCCATGCCGTCGCCAGCCTCTGCCTTCGTCTAATTCTCTTTCTAAGCTGCAGCGGTTTGGGATCTCCGATCGATATTCCTCTCGACCTCCATTGCCGTTGGTTCCTGCTTCTTCTGGAGCTGGCGTCGTCGGCTCCTTTCCGATCAGAGGAACGTATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTTTATGTTGTTAAGCCTACAACAACAGCTGATGAAGCATTAGAGGCCTTGGTGGAGAAGAGAATAACTGGTTTTCCTGTTGTTGATGAAGATTGGAATTTGGTCGGAGTCATCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTGGTACTCAAAGCGATACCAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAACATTCAATGAGTTACAGAAACTTCTCTGTAAAACAAATGGTAAAGTTGTTGGCGACCTGATGACGCCTGCTCCGCTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCGGTAGTAGATGCAGATGGCAAGCTGGTGGGGATCATTACTAGGGGAAATGTCGTTAGAGCTGCGTTGCAGATAAAACGTGCTGCTGAAAGTTCGACATAATTCTGGGAACGTTGGCTGGTTGGCTGGTGTCGCTTTGTGGTAAGGTAAACATGCTATTCAAAAGCTTAGCATTGATTTGTAGATCTTGAATATAGTATATATATAATAGTTTGCTTTAAAGGGAAGTTTATTGTTGTTCTAAGATTCTTCTTCCCAGTTTCCTAACTGAGAAATGTTGGTCTATTGCAACTTTTATTTATCCCAGCATGTCAGGTCAGTCCACTGTATGATTTCTCTATTAAGTTAGTCATATTACTGTTTAAATTTCCCTAAACATTTTGAATATAATTAGTGAGTATTTTTCTACTTCATTAGGAAGGATCTTGTGAGATTTTCCTGTATCCTTTTGATCGAGAATATTTCTTTAAACTAATTAAACTATGTTCATGTCAACCGAGTTTTGAAGTTCATGTTTATATCGGCTGAATTTTGATGATCTGAACTTAAGTATGCAAAATAAATTATTCTATATGAACCAAGAGACGTCAATTATACAATATACTTCAATGAAGATGTGAAGAAAATATTGTTGAAATTAAGATATTTCAATTCATGCTACATTGAAGAAGAATGAAGTTTCATGTTATAAATTTTGGGCGAATTACAATTTAGA

Coding sequence (CDS)

ATGAGCTCCATCTCGCTCTCCAATTCACATGCTCTGCCGCGGGCTTATCCTCATCATCTTTGCCACTCTCAGCCGCATCCATGCCGTCGCCAGCCTCTGCCTTCGTCTAATTCTCTTTCTAAGCTGCAGCGGTTTGGGATCTCCGATCGATATTCCTCTCGACCTCCATTGCCGTTGGTTCCTGCTTCTTCTGGAGCTGGCGTCGTCGGCTCCTTTCCGATCAGAGGAACGTATACGGTTGGTGATTTTATGACGAGAAAGGAGAATCTTTATGTTGTTAAGCCTACAACAACAGCTGATGAAGCATTAGAGGCCTTGGTGGAGAAGAGAATAACTGGTTTTCCTGTTGTTGATGAAGATTGGAATTTGGTCGGAGTCATCTCAGATTATGACTTATTAGCACTTGATTCCATTTCAGGTGGTACTCAAAGCGATACCAATCTGTTTCCTGATGTGGATAGTTCGTGGAAAACATTCAATGAGTTACAGAAACTTCTCTGTAAAACAAATGGTAAAGTTGTTGGCGACCTGATGACGCCTGCTCCGCTAGTTGTTCGTGAAACTTCAAATTTAGAAGATGCTGCCAGGTTGTTGCTTGAAACAAAATATCGTCGATTGCCGGTAGTAGATGCAGATGGCAAGCTGGTGGGGATCATTACTAGGGGAAATGTCGTTAGAGCTGCGTTGCAGATAAAACGTGCTGCTGAAAGTTCGACATAA

Protein sequence

MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLVPASSGAGVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST
Homology
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BLAST of Carg19658 vs. NCBI nr
Match: XP_023553108.1 (CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462.6 bits (1189), Expect = 8.0e-127
Identity = 235/239 (98.33%), Postives = 236/239 (98.74%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV
Sbjct: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60

Query: 61  PASSGAGVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED 120
            ASSGA VVGSFPIRGT+TVGDFMT KENLYVVKPTTTADEALEALVEKRITGFPVVDED
Sbjct: 61  LASSGASVVGSFPIRGTHTVGDFMTTKENLYVVKPTTTADEALEALVEKRITGFPVVDED 120

Query: 121 WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP 180
           WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP
Sbjct: 121 WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP 180

Query: 181 APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST 240
           APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST
Sbjct: 181 APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST 239

[Close]
BLAST of Carg19658 vs. NCBI nr
Match: XP_022922706.1 (CBS domain-containing protein CBSX2, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 456.4 bits (1173), Expect = 5.8e-125
Identity = 233/239 (97.49%), Postives = 234/239 (97.91%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           MSSISLSNSHALPRAYPHHLCHSQ HPCRRQ LPSSNSL KLQRFGISDRYS+RPPLPLV
Sbjct: 1   MSSISLSNSHALPRAYPHHLCHSQLHPCRRQSLPSSNSLFKLQRFGISDRYSTRPPLPLV 60

Query: 61  PASSGAGVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED 120
            ASSGA VVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED
Sbjct: 61  LASSGASVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED 120

Query: 121 WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP 180
           WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP
Sbjct: 121 WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP 180

Query: 181 APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST 240
           APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST
Sbjct: 181 APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST 239

[Close]
BLAST of Carg19658 vs. NCBI nr
Match: XP_022984710.1 (CBS domain-containing protein CBSX2, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 454.1 bits (1167), Expect = 2.9e-124
Identity = 232/239 (97.07%), Postives = 233/239 (97.49%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           MSSISLSNSHAL R YPHHLCHSQPHP RRQPLPSSN LSKLQRFGISDRYS+RPPLPLV
Sbjct: 1   MSSISLSNSHALARLYPHHLCHSQPHPWRRQPLPSSNYLSKLQRFGISDRYSTRPPLPLV 60

Query: 61  PASSGAGVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED 120
            ASSGA VVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED
Sbjct: 61  LASSGASVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED 120

Query: 121 WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP 180
           WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP
Sbjct: 121 WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP 180

Query: 181 APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST 240
           APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST
Sbjct: 181 APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST 239

[Close]
BLAST of Carg19658 vs. NCBI nr
Match: XP_022922703.1 (CBS domain-containing protein CBSX2, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022922705.1 CBS domain-containing protein CBSX2, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 450.3 bits (1157), Expect = 4.1e-123
Identity = 233/244 (95.49%), Postives = 234/244 (95.90%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           MSSISLSNSHALPRAYPHHLCHSQ HPCRRQ LPSSNSL KLQRFGISDRYS+RPPLPLV
Sbjct: 1   MSSISLSNSHALPRAYPHHLCHSQLHPCRRQSLPSSNSLFKLQRFGISDRYSTRPPLPLV 60

Query: 61  PASSGAGVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADE-----ALEALVEKRITGFP 120
            ASSGA VVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADE     ALEALVEKRITGFP
Sbjct: 61  LASSGASVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEAFVITALEALVEKRITGFP 120

Query: 121 VVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVG 180
           VVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVG
Sbjct: 121 VVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVG 180

Query: 181 DLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA 240
           DLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA
Sbjct: 181 DLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA 240

[Close]
BLAST of Carg19658 vs. NCBI nr
Match: XP_022984708.1 (CBS domain-containing protein CBSX2, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022984709.1 CBS domain-containing protein CBSX2, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 448.0 bits (1151), Expect = 2.1e-122
Identity = 232/244 (95.08%), Postives = 233/244 (95.49%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           MSSISLSNSHAL R YPHHLCHSQPHP RRQPLPSSN LSKLQRFGISDRYS+RPPLPLV
Sbjct: 1   MSSISLSNSHALARLYPHHLCHSQPHPWRRQPLPSSNYLSKLQRFGISDRYSTRPPLPLV 60

Query: 61  PASSGAGVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADE-----ALEALVEKRITGFP 120
            ASSGA VVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADE     ALEALVEKRITGFP
Sbjct: 61  LASSGASVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEAFVITALEALVEKRITGFP 120

Query: 121 VVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVG 180
           VVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVG
Sbjct: 121 VVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVG 180

Query: 181 DLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA 240
           DLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA
Sbjct: 181 DLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA 240

[Close]
BLAST of Carg19658 vs. TAIR10
Match: AT4G36910.1 (Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 273.1 bits (697), Expect = 1.6e-73
Identity = 136/206 (66.02%), Postives = 169/206 (82.04%), Query Frame = 0 

Query: 33  LPSSNSLSKLQRFGISDRYSSRPPLPLVPASSGAGVV--GSFPIRGTYTVGDFMTRKENL 92
           LP   S+    +F  S  + S+  +P   +++G+ ++   S P  G YTVG+FMT+KE+L
Sbjct: 28  LPRFLSVQPCHKFTFSRSFPSKSRIPSASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDL 87

Query: 93  YVVKPTTTADEALEALVEKRITGFPVVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFP 152
           +VVKPTTT DEALE LVE RITGFPV+DEDW LVG++SDYDLLALDSISG  +++ ++FP
Sbjct: 88  HVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFP 147

Query: 153 DVDSSWKTFNELQKLLCKTNGKVVGDLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVD 212
           +VDS+WKTFN +QKLL KTNGK+VGDLMTPAPLVV E +NLEDAA++LLETKYRRLPVVD
Sbjct: 148 EVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 207

Query: 213 ADGKLVGIITRGNVVRAALQIKRAAE 237
           +DGKLVGIITRGNVVRAALQIKR+ +
Sbjct: 208 SDGKLVGIITRGNVVRAALQIKRSGD 233

[Close]
BLAST of Carg19658 vs. TAIR10
Match: AT4G34120.1 (Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-72
Identity = 154/244 (63.11%), Postives = 183/244 (75.00%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           M SISLSNS  + R     L  S  H   +  LP S+S   L       R S+  P   V
Sbjct: 1   MGSISLSNSMPITRL---PLLTSLYH---QSFLPISSSSFSLLPLSNRRRSSTFSPSITV 60

Query: 61  PASSGAGVV----GSFPIR-GTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFP 120
            A   A        S P + G YTVGDFMT ++NL+VVKP+T+ D+ALE LVEK++TG P
Sbjct: 61  SAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLP 120

Query: 121 VVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVG 180
           V+D++W LVGV+SDYDLLALDSISG +Q+DTNLFPDVDS+WKTFNELQKL+ KT GKVVG
Sbjct: 121 VIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVG 180

Query: 181 DLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA 240
           DLMTP+PLVVR+++NLEDAARLLLETK+RRLPVVDADGKL+GI+TRGNVVRAALQIKR  
Sbjct: 181 DLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRET 238

[Close]
BLAST of Carg19658 vs. Swiss-Prot
Match: sp|O23193|CBSX1_ARATH (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 3.0e-72
Identity = 136/206 (66.02%), Postives = 169/206 (82.04%), Query Frame = 0 

Query: 33  LPSSNSLSKLQRFGISDRYSSRPPLPLVPASSGAGVV--GSFPIRGTYTVGDFMTRKENL 92
           LP   S+    +F  S  + S+  +P   +++G+ ++   S P  G YTVG+FMT+KE+L
Sbjct: 28  LPRFLSVQPCHKFTFSRSFPSKSRIPSASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDL 87

Query: 93  YVVKPTTTADEALEALVEKRITGFPVVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFP 152
           +VVKPTTT DEALE LVE RITGFPV+DEDW LVG++SDYDLLALDSISG  +++ ++FP
Sbjct: 88  HVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSISGSGRTENSMFP 147

Query: 153 DVDSSWKTFNELQKLLCKTNGKVVGDLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVD 212
           +VDS+WKTFN +QKLL KTNGK+VGDLMTPAPLVV E +NLEDAA++LLETKYRRLPVVD
Sbjct: 148 EVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 207

Query: 213 ADGKLVGIITRGNVVRAALQIKRAAE 237
           +DGKLVGIITRGNVVRAALQIKR+ +
Sbjct: 208 SDGKLVGIITRGNVVRAALQIKRSGD 233

[Close]
BLAST of Carg19658 vs. Swiss-Prot
Match: sp|Q9C5D0|CBSX2_ARATH (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.9e-71
Identity = 154/244 (63.11%), Postives = 183/244 (75.00%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           M SISLSNS  + R     L  S  H   +  LP S+S   L       R S+  P   V
Sbjct: 1   MGSISLSNSMPITRL---PLLTSLYH---QSFLPISSSSFSLLPLSNRRRSSTFSPSITV 60

Query: 61  PASSGAGVV----GSFPIR-GTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFP 120
            A   A        S P + G YTVGDFMT ++NL+VVKP+T+ D+ALE LVEK++TG P
Sbjct: 61  SAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLP 120

Query: 121 VVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVG 180
           V+D++W LVGV+SDYDLLALDSISG +Q+DTNLFPDVDS+WKTFNELQKL+ KT GKVVG
Sbjct: 121 VIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVG 180

Query: 181 DLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAA 240
           DLMTP+PLVVR+++NLEDAARLLLETK+RRLPVVDADGKL+GI+TRGNVVRAALQIKR  
Sbjct: 181 DLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRET 238

[Close]
BLAST of Carg19658 vs. Swiss-Prot
Match: sp|Q58821|Y1426_METJA (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1426 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10
Identity = 38/129 (29.46%), Postives = 75/129 (58.14%), Query Frame = 0 

Query: 108 EKRITGFPVVDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPD----VDSSWKTFNELQ 167
           + +I+G PV+++D  LVG+IS+ D+  + +I    +    + P     ++   KT  +++
Sbjct: 42  KNKISGAPVLNKDGKLVGIISESDI--VKTIVTHNEDLNLILPSPLDLIELPLKTALKIE 101

Query: 168 KLLCKTNGKV---VGDLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIIT 227
           + +      +   V D+MT   +V +    + DAA+L+++   +RLPVVD +G L+GI+T
Sbjct: 102 EFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVT 161

Query: 228 RGNVVRAAL 230
           RG+++ A +
Sbjct: 162 RGDLIEALI 168

[Close]
BLAST of Carg19658 vs. Swiss-Prot
Match: sp|P42851|IMDH_PYRFU (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=guaB PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-09
Identity = 42/138 (30.43%), Postives = 69/138 (50.00%), Query Frame = 0 

Query: 88  ENLYVVKPTTTADEALEALVEKRITGFPVVDEDWNLVGVISDYDLLALDSISGGTQSDTN 147
           E++  + P  T D AL  + +  I G PVV+ED  +VG+I+  D+ A +           
Sbjct: 101 EDVITIAPDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAARE----------- 160

Query: 148 LFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTPAPLVVRETSNLEDAARLLLETKYRRLP 207
                                  G+ V +LMT   + V E+ ++E+A ++++E +  RLP
Sbjct: 161 -----------------------GRTVKELMTREVITVPESVDVEEALKIMMENRIDRLP 203

Query: 208 VVDADGKLVGIITRGNVV 226
           VV+ DGKLVG+IT  ++V
Sbjct: 221 VVNEDGKLVGLITMSDLV 203

[Close]
BLAST of Carg19658 vs. Swiss-Prot
Match: sp|Q54H97|Y8960_DICDI (CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289609 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-09
Identity = 42/144 (29.17%), Postives = 75/144 (52.08%), Query Frame = 0 

Query: 88  ENLYVVKPTTTADEALEALVEKRITGFPVVDEDWNLVGVISDYDLLALDSISGGTQSDTN 147
           ++L+ +   TT D AL++L    I   PVVD D NL G+I+D DL           +D+ 
Sbjct: 11  KSLFTINLDTTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDL--------RLATDSP 70

Query: 148 LFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTPAPLVVRETSNLEDAARLLLETKYRRLP 207
             P+ +      + L+KL        V  +M   P+ + + S + +AA+L+  T    LP
Sbjct: 71  FLPENNE-----DRLEKLRLHK----VSSIMKQNPVTIEDFSPVVEAAKLMRVTNVGGLP 130

Query: 208 VVDADGKLVGIITRGNVVRAALQI 232
           V+D  G+L+G++TR +++   +++
Sbjct: 131 VLDKKGRLIGMVTRSDLLDLLIKV 137

[Close]
BLAST of Carg19658 vs. TrEMBL
Match: tr|A0A0A0L716|A0A0A0L716_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G202220 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 3.5e-110
Identity = 209/239 (87.45%), Postives = 218/239 (91.21%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           MSSISLSNSH L R YPHHL HS       +PL S+NSLSKL RFGISDR+ +RPPLPLV
Sbjct: 1   MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSKLHRFGISDRFPARPPLPLV 60

Query: 61  PASSGAGVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED 120
            ASSGAGVV SFP+RGTYTVGDFMTRKENLYVVKPTTT DEALE LVEKRITGFPVVD+D
Sbjct: 61  LASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDD 120

Query: 121 WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP 180
           WNLVGV+SDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNE+QKLLCKTNGKVVGDLMT 
Sbjct: 121 WNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEIQKLLCKTNGKVVGDLMTS 180

Query: 181 APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST 240
           +PL VRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAE ST
Sbjct: 181 SPLAVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAERST 239

[Close]
BLAST of Carg19658 vs. TrEMBL
Match: tr|A0A1S3C251|A0A1S3C251_CUCME (CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496172 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.3e-109
Identity = 209/239 (87.45%), Postives = 218/239 (91.21%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRFGISDRYSSRPPLPLV 60
           M+SISLSNSHAL R YPHHL HS       +PL SSNSLSKL RFGISDR+ +RPPLPLV
Sbjct: 1   MTSISLSNSHALARPYPHHLPHSHRQQWCSRPLLSSNSLSKLHRFGISDRFPARPPLPLV 60

Query: 61  PASSGAGVVGSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDED 120
            ASSGAGVV SFP+RGTYTVGDFMTRKENLYVVKPTTT DEALE LVEKRITGFPVVD+D
Sbjct: 61  LASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVDDD 120

Query: 121 WNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTP 180
           WNLVGV+SDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNE+QKLL KTNGKVVGDLMT 
Sbjct: 121 WNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEIQKLLSKTNGKVVGDLMTS 180

Query: 181 APLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAESST 240
           +PL VRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAE ST
Sbjct: 181 SPLAVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAERST 239

[Close]
BLAST of Carg19658 vs. TrEMBL
Match: tr|A0A2P4MZV5|A0A2P4MZV5_QUESU (Cbs domain-containing protein cbsx2, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_15529 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 9.2e-79
Identity = 153/183 (83.61%), Postives = 166/183 (90.71%), Query Frame = 0 

Query: 58  PLVPASSGAGVVGSFPIR-GTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPV 117
           P+V A SG GV  S P R GTYTVGDFMT+KE L+VVKPTTT +EAL+ALVEKRITGFPV
Sbjct: 72  PVVSAFSGVGVTNSLPPRSGTYTVGDFMTKKEELHVVKPTTTVEEALDALVEKRITGFPV 131

Query: 118 VDEDWNLVGVISDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGD 177
           +D+ W LVGV+SDYDLLALDSISGG QSDTNLFPDVDSSWKTFNE+QKL+ K NGKVVGD
Sbjct: 132 IDDQWKLVGVVSDYDLLALDSISGGNQSDTNLFPDVDSSWKTFNEIQKLIGKNNGKVVGD 191

Query: 178 LMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAE 237
           LMTPAPLVVRE++NLEDAARLLLETKYRRLPVVD DGKLVGIITRGNVVRAALQIKRA+E
Sbjct: 192 LMTPAPLVVRESTNLEDAARLLLETKYRRLPVVDGDGKLVGIITRGNVVRAALQIKRASE 251

Query: 238 SST 240
            ST
Sbjct: 252 KST 254

[Close]
BLAST of Carg19658 vs. TrEMBL
Match: tr|W9S667|W9S667_9ROSA (CBS domain-containing protein CBSX1 OS=Morus notabilis OX=981085 GN=L484_027493 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.3e-77
Identity = 161/215 (74.88%), Postives = 176/215 (81.86%), Query Frame = 0 

Query: 22  HSQPHPCRRQ-PLPSSNSLSKLQRFGISDRYSSRPPLPLVPASSGAGVVGSFPIRG-TYT 81
           H++P P     P   S  L + +RF  SDR+ SR   P + ASSGA V  S P R  TYT
Sbjct: 18  HNRPLPSLLLFPAHQSRKLLQRRRFDASDRF-SRSLRPPIAASSGAHVANSVPSRNKTYT 77

Query: 82  VGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPVVDEDWNLVGVISDYDLLALDSIS 141
           VGDFMTRKENL VVKPTTT DEALE LVEKRITGFPV+D+DW LVGV+SDYDLLALDSIS
Sbjct: 78  VGDFMTRKENLLVVKPTTTVDEALETLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 137

Query: 142 GGTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKVVGDLMTPAPLVVRETSNLEDAARLLL 201
           GG Q DT+LFP+VDSSWKTFNE+Q+LL KTNGKVVGDLMT APLVV ET+NLEDAARLLL
Sbjct: 138 GGGQCDTSLFPNVDSSWKTFNEIQRLLSKTNGKVVGDLMTSAPLVVHETTNLEDAARLLL 197

Query: 202 ETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRA 235
           ETKYRRLPVVD +GKLVGIITRG VVRAALQIKRA
Sbjct: 198 ETKYRRLPVVDGEGKLVGIITRGGVVRAALQIKRA 231

[Close]
BLAST of Carg19658 vs. TrEMBL
Match: tr|M5VMP1|M5VMP1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G129500 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 9.5e-76
Identity = 167/243 (68.72%), Postives = 189/243 (77.78%), Query Frame = 0 

Query: 1   MSSISLSNSHALPRAYPHHLCHSQPHPCRRQPLPSSNSLSKLQRF---GISDRYSSRPPL 60
           M SIS+     +P  +P++       P      PSS SL  L+RF    +S R  S    
Sbjct: 2   MGSISI----LVPITFPNY------SPLSSSATPSS-SLLPLRRFPLLALSKRRRSLQFR 61

Query: 61  PLVPASSGAGVV-GSFPIRGTYTVGDFMTRKENLYVVKPTTTADEALEALVEKRITGFPV 120
           PLV ASS AGV   S P  GT+TVGDFMT KE L+VVKP+TT D+AL+ALVEKRITGFPV
Sbjct: 62  PLVLASSAAGVASNSLPRNGTFTVGDFMTTKEYLHVVKPSTTVDQALDALVEKRITGFPV 121

Query: 121 VDEDWNLVGVISDYDLLALDSISG---GTQSDTNLFPDVDSSWKTFNELQKLLCKTNGKV 180
           +D+DW LVGV+SDYDLLALDSISG   G QSDTNLFPDVDSSWKTF+E+QKLL KTNGKV
Sbjct: 122 IDDDWKLVGVVSDYDLLALDSISGNIKGGQSDTNLFPDVDSSWKTFHEIQKLLSKTNGKV 181

Query: 181 VGDLMTPAPLVVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKR 237
           VGD+MTPAPLVVRET+NLEDAARLLL TKYRRLPVVD++GKLVGIITRGNVV+AALQIKR
Sbjct: 182 VGDVMTPAPLVVRETTNLEDAARLLLATKYRRLPVVDSEGKLVGIITRGNVVKAALQIKR 233

The following BLAST results are available for this feature:
BLAST of Carg19658 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023553108.18.0e-12798.33CBS domain-containing protein CBSX1, chloroplastic-like [Cucurbita pepo subsp. p... [more]
XP_022922706.15.8e-12597.49CBS domain-containing protein CBSX2, chloroplastic-like isoform X2 [Cucurbita mo... [more]
XP_022984710.12.9e-12497.07CBS domain-containing protein CBSX2, chloroplastic-like isoform X2 [Cucurbita ma... [more]
XP_022922703.14.1e-12395.49CBS domain-containing protein CBSX2, chloroplastic-like isoform X1 [Cucurbita mo... [more]
XP_022984708.12.1e-12295.08CBS domain-containing protein CBSX2, chloroplastic-like isoform X1 [Cucurbita ma... [more]
BLAST of Carg19658 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36910.11.6e-7366.02Cystathionine beta-synthase (CBS) family protein[more]
AT4G34120.11.1e-7263.11Cystathionine beta-synthase (CBS) family protein[more]
BLAST of Carg19658 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O23193|CBSX1_ARATH3.0e-7266.02CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana OX=37... [more]
sp|Q9C5D0|CBSX2_ARATH1.9e-7163.11CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=37... [more]
sp|Q58821|Y1426_METJA7.2e-1029.46Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 430... [more]
sp|P42851|IMDH_PYRFU3.6e-0930.43Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587... [more]
sp|Q54H97|Y8960_DICDI3.6e-0929.17CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum OX=44689 ... [more]
BLAST of Carg19658 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L716|A0A0A0L716_CUCSA3.5e-11087.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G202220 PE=4 SV=1[more]
tr|A0A1S3C251|A0A1S3C251_CUCME1.3e-10987.45CBS domain-containing protein CBSX1, chloroplastic-like OS=Cucumis melo OX=3656 ... [more]
tr|A0A2P4MZV5|A0A2P4MZV5_QUESU9.2e-7983.61Cbs domain-containing protein cbsx2, chloroplastic OS=Quercus suber OX=58331 GN=... [more]
tr|W9S667|W9S667_9ROSA2.3e-7774.88CBS domain-containing protein CBSX1 OS=Morus notabilis OX=981085 GN=L484_027493 ... [more]
tr|M5VMP1|M5VMP1_PRUPE9.5e-7668.72Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G129500 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000644CBS_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19658-RACarg19658-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000644CBS domainSMARTSM00116cbs_1coord: 89..137
e-value: 8.4E-7
score: 38.6
coord: 181..229
e-value: 1.7E-12
score: 57.5
IPR000644CBS domainPFAMPF00571CBScoord: 174..227
e-value: 9.1E-16
score: 58.0
coord: 80..134
e-value: 7.2E-13
score: 48.7
IPR000644CBS domainPROSITEPS51371CBScoord: 178..236
score: 14.937
IPR000644CBS domainPROSITEPS51371CBScoord: 84..144
score: 13.357
NoneNo IPR availableGENE3DG3DSA:3.10.580.10coord: 76..235
e-value: 1.2E-52
score: 180.2
NoneNo IPR availablePANTHERPTHR43803:SF1SUBFAMILY NOT NAMEDcoord: 74..237
NoneNo IPR availablePANTHERPTHR43803FAMILY NOT NAMEDcoord: 74..237
NoneNo IPR availableCDDcd02205CBS_paircoord: 88..227
e-value: 2.49735E-28
score: 104.047
NoneNo IPR availableSUPERFAMILYSSF54631CBS-domain paircoord: 76..227

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19658Cla013086Watermelon (97103) v1carwmB0288
Carg19658Cla016025Watermelon (97103) v1carwmB0289
Carg19658Csa3G202220Cucumber (Chinese Long) v2carcuB0320
Carg19658Csa7G073520Cucumber (Chinese Long) v2carcuB0323
Carg19658MELO3C019527Melon (DHL92) v3.5.1carmeB0296
Carg19658MELO3C018463Melon (DHL92) v3.5.1carmeB0295
Carg19658ClCG02G006090Watermelon (Charleston Gray)carwcgB0288
Carg19658ClCG05G010170Watermelon (Charleston Gray)carwcgB0289
Carg19658CSPI03G18300Wild cucumber (PI 183967)carcpiB0326
Carg19658CSPI07G07500Wild cucumber (PI 183967)carcpiB0329
Carg19658Cucsa.219730Cucumber (Gy14) v1carcgyB0344
Carg19658Cucsa.244520Cucumber (Gy14) v1carcgyB0345
Carg19658CmaCh11G017380Cucurbita maxima (Rimu)carcmaB0405
Carg19658CmaCh16G003500Cucurbita maxima (Rimu)carcmaB0406
Carg19658CmaCh04G004800Cucurbita maxima (Rimu)carcmaB0408
Carg19658CmoCh16G003740Cucurbita moschata (Rifu)carcmoB0402
Carg19658CmoCh11G013770Cucurbita moschata (Rifu)carcmoB0401
Carg19658CmoCh04G005150Cucurbita moschata (Rifu)carcmoB0403
Carg19658Lsi03G005060Bottle gourd (USVL1VR-Ls)carlsiB267
Carg19658Lsi05G002270Bottle gourd (USVL1VR-Ls)carlsiB270
Carg19658Cp4.1LG01g02330Cucurbita pepo (Zucchini)carcpeB0408
Carg19658Cp4.1LG14g04200Cucurbita pepo (Zucchini)carcpeB0407
Carg19658Cp4.1LG04g07970Cucurbita pepo (Zucchini)carcpeB0409
Carg19658CsGy3G018150Cucumber (Gy14) v2carcgybB0307
Carg19658MELO3C019527.2Melon (DHL92) v3.6.1carmedB0307
Carg19658MELO3C018463.2Melon (DHL92) v3.6.1carmedB0306
Carg19658CsaV3_7G008450Cucumber (Chinese Long) v3carcucB0329
Carg19658CsaV3_3G018360Cucumber (Chinese Long) v3carcucB0326
Carg19658Cla97C02G033040Watermelon (97103) v2carwmbB0303
Carg19658Cla97C05G092560Watermelon (97103) v2carwmbB0304
Carg19658Bhi01G001269Wax gourdcarwgoB0382
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19658Carg08149Silver-seed gourdcarcarB324
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19658Cucurbita maxima (Rimu)carcmaB0407