Lsi05G002120 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002120
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	BEST plant protein match is: (TAIR:plant.1) protein, putative
Location	chr05 : 2895527 .. 2895988 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAAGAATTTCATTTTCAAATGATTTTGTTGAAACAAAACAGGCATTGAAGATTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGAATTTGAGTTCAGTGTGAAGGACAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGATAAGGACAGTTGTTCAAGGAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAATTGCAAGTGAATGAAGAAGAAGAAGAAGAAGATGAAGAAGTTTCATTTCCAAAGTTTACAAAAATTTCTTCTGCTAGTTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCTAAGAAACAGAGTAGAAATCAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCTGTTTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGGTAA

mRNA sequence

ATGGATCCAAGAATTTCATTTTCAAATGATTTTGTTGAAACAAAACAGGCATTGAAGATTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGAATTTGAGTTCAGTGTGAAGGACAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGATAAGGACAGTTGTTCAAGGAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAATTGCAAGTGAATGAAGAAGAAGAAGAAGAAGATGAAGAAGTTTCATTTCCAAAGTTTACAAAAATTTCTTCTGCTAGTTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCTAAGAAACAGAGTAGAAATCAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCTGTTTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGGTAA

Coding sequence (CDS)

ATGGATCCAAGAATTTCATTTTCAAATGATTTTGTTGAAACAAAACAGGCATTGAAGATTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGAATTTGAGTTCAGTGTGAAGGACAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGATAAGGACAGTTGTTCAAGGAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAATTGCAAGTGAATGAAGAAGAAGAAGAAGAAGATGAAGAAGTTTCATTTCCAAAGTTTACAAAAATTTCTTCTGCTAGTTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCTAAGAAACAGAGTAGAAATCAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCTGTTTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGGTAA

Protein sequence

MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDKDSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKKQSRNQGVLKTVEEEEKTSVFLHEDLINIARKNG

Homology

[Close]

BLAST of Lsi05G002120 vs. TrEMBL
Match: A0A0A0L727_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207340 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-63
Identity = 130/153 (84.97%), Postives = 139/153 (90.85%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           MDPRISFSNDFVETKQ LK+ENIYREAPVSS+FEFSVKDRCMISADEIFFQGKLLPLKD 
Sbjct: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
               RN++LVKTTLRDELQVNEEE++     SFPKFTKISS SCWKEKFGFRKSHFV KK
Sbjct: 61  ---LRNHVLVKTTLRDELQVNEEEDD----TSFPKFTKISSGSCWKEKFGFRKSHFVAKK 120

Query: 121 QSRNQGVLKTVEEEEKTSVFLHEDLINIARKNG 154
           QSRN+ VLKTVEEE++TSVFLHEDLINIARKNG
Sbjct: 121 QSRNEVVLKTVEEEDRTSVFLHEDLINIARKNG 146

[Close]

BLAST of Lsi05G002120 vs. TrEMBL
Match: B9RYJ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813680 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.7e-28
Identity = 79/152 (51.97%), Postives = 104/152 (68.42%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           MDPRISFS+DFV+T++A+K E  YREAPVSS+FEFSV++  MI ADEIF +G +LP   K
Sbjct: 19  MDPRISFSSDFVDTQEAIKFETNYREAPVSSDFEFSVRNYSMIPADEIFCKGMILP--SK 78

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
           D+C+  N L K TLRD+L      +++D+  SFP+  K  S   WKE+ G ++ H V KK
Sbjct: 79  DNCT--NQLRKMTLRDKLL-----DDDDDFDSFPRVQK--STGWWKERLGLKRGHIVTKK 138

Query: 121 QSRNQGVLKTVEEEEKTSVFLHEDLINIARKN 153
             RN GVL+ +  EEK  VFLHE+   +A KN
Sbjct: 139 GDRNHGVLERI-VEEKRHVFLHEE--GLAGKN 156

[Close]

BLAST of Lsi05G002120 vs. TrEMBL
Match: B9N4X7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14880g PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-26
Identity = 75/143 (52.45%), Postives = 95/143 (66.43%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           +DPRISFSNDFV+ +QA+K E+ YREAPVS++FEFSVK+  MI ADEIFF+G +LPL  K
Sbjct: 19  IDPRISFSNDFVDAQQAIKYESSYREAPVSTDFEFSVKNYSMIPADEIFFKGTMLPL--K 78

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
           D+C+ N+ L K TLRDEL V++E  +         F    S+  WKEK   ++ HF  KK
Sbjct: 79  DNCT-NSQLRKMTLRDELLVDDEYND--------AFPTPKSSGWWKEKLWLKRGHFTLKK 138

Query: 121 QSRNQGVLKTVEEEEKTSVFLHE 144
             RN  VL  V EE    VF+HE
Sbjct: 139 SDRNSAVLDRVVEER--PVFVHE 148

[Close]

BLAST of Lsi05G002120 vs. TrEMBL
Match: M5VPA3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011991mg PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.1e-26
Identity = 76/146 (52.05%), Postives = 97/146 (66.44%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           MDPRISFSNDF +T+QA+K E  YREAPVSS+FEFSV +  MISADEI F+G LLPLKD 
Sbjct: 1   MDPRISFSNDFADTQQAIKHETSYREAPVSSDFEFSVNNFGMISADEIMFKGTLLPLKDN 60

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
            +   N L   TTLRDEL V     ++D     P+  K  S S WKE+ G +++  VPKK
Sbjct: 61  GA---NQLGKTTTLRDELLV-----DDDYGDVLPRAPK--SLSRWKERLGLKRAQVVPKK 120

Query: 121 QSRNQGVLKTVEEEEKTSVFLHEDLI 147
             R+  VL+ + EE +  VF+HE ++
Sbjct: 121 ADRSHSVLERIAEERR-PVFVHEAVL 135

[Close]

BLAST of Lsi05G002120 vs. TrEMBL
Match: B9HS01_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s10560g PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.1e-26
Identity = 77/144 (53.47%), Postives = 96/144 (66.67%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           MDPRISFSNDF + K+A K E+ YREAPVS++FEFSVK+  MI ADEIFF+G +LPL  K
Sbjct: 19  MDPRISFSNDFADAKKANKYESSYREAPVSTDFEFSVKNDSMIPADEIFFEGTMLPL--K 78

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
           D+C+  N   K TLRDEL V++E +      +FP   KIS    WKEK G ++ H  PKK
Sbjct: 79  DNCT--NQQRKMTLRDELLVDDEYDN-----AFPA-PKIS--GWWKEKLGLKRGHIAPKK 138

Query: 121 QSRNQGVLKTVEEEEKTSVFLHED 145
             R  GVL  V EE    +F+HE+
Sbjct: 139 SDRVAGVLDRVVEE--MPIFVHEE 148

[Close]

BLAST of Lsi05G002120 vs. TAIR10
Match: AT5G66800.1 (AT5G66800.1 unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-12
Identity = 51/136 (37.50%), Postives = 72/136 (52.94%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSE----------FEFSVKDRCMISADEIFF 60
           M PRISFSNDFVE +   +     R +P+S +          FEFSV +  M+ ADE+F 
Sbjct: 17  MSPRISFSNDFVEIRP--ETTKTTRSSPLSKQEGSSSSFSDNFEFSVSNYTMMPADELFS 76

Query: 61  QGKLLPLKDKDSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSF------PKFTKISSASC 116
           +GKLLP K+ +        V+ TLR+EL V E+EEE   + +       P F+  SS+S 
Sbjct: 77  KGKLLPFKETNQ-------VQRTLREELLVEEDEEEGPRDATNIFSLKPPIFSSSSSSSS 136

[Close]

BLAST of Lsi05G002120 vs. TAIR10
Match: AT4G34419.1 (AT4G34419.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-11
Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = 1


Query: 2   DPRISFSNDFVETKQALKIENIYREAPVSSE-FEFSVKDRCMISADEIFFQGKLLPLKDK 61
           +PRISFS+ F  TK  +     Y+EAPVSS+ FEF V++  M +ADEIFF G +LPLK++
Sbjct: 17  EPRISFSSGFAATKHEMIK---YKEAPVSSDDFEFGVENFSMTTADEIFFDGMILPLKEE 76

Query: 62  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFG--FRKSHFVP 121
            + ++      +TLR+EL     EE+ D     P+     S+  W+E+ G  F +S    
Sbjct: 77  VNTTKR----MSTLREEL----SEEDGDS----PRSKSKGSSGWWRERLGLAFVRSKKDH 125

Query: 122 KKQS 123
           KK S
Sbjct: 137 KKSS 125

[Close]

BLAST of Lsi05G002120 vs. TAIR10
Match: AT3G50640.1 (AT3G50640.1 unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.3e-10
Identity = 51/137 (37.23%), Postives = 68/137 (49.64%), Query Frame = 1


Query: 4   RISFSNDFVET---KQALKIENIYREAPVS---SEFEFSVKDRCMISADEIFFQGKLLPL 63
           RISFSN+FVE    K   K  NI   +  S   ++F FSV D  MI ADEIF +GK+LP 
Sbjct: 15  RISFSNEFVEIRSEKSNAKSNNINSRSSFSMPSADFAFSVTDYSMIPADEIFLKGKILPF 74

Query: 64  KDKDSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSAS-----CWKEKFGFR 123
           K+     R       TL +EL   EE    D      +   +SS+S      W+E  G +
Sbjct: 75  KETSHVHR-------TLGEELLTEEEGSMVDGNTFSLRPILLSSSSFSTKGTWRELLGLK 134

Query: 124 KSHFVPKKQSR-NQGVL 129
           ++H   KK  + N+ VL
Sbjct: 135 RTHVRSKKTDKVNEEVL 144

[Close]

BLAST of Lsi05G002120 vs. TAIR10
Match: AT3G19200.1 (AT3G19200.1 unknown protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 39/90 (43.33%), Postives = 52/90 (57.78%), Query Frame = 1


Query: 1  MDPRISFSNDFVE-----TKQALKIENIYREAPVSSEFEFSVKDRCMIS-ADEIFFQGKL 60
          +D RISFSNDF +     T      +  Y+EAPVSS+F+F+V++    S ADEIFF G L
Sbjct: 15 VDARISFSNDFADSDSKHTASRADGQMKYKEAPVSSDFKFNVENFGFTSAADEIFFGGVL 74

Query: 61 LPLKDKDSCSRNNLLVKTTLRDELQVNEEE 85
          LPL+      +      TTLRDEL   + +
Sbjct: 75 LPLE------KTTQRKVTTLRDELSAQDSD 98

[Close]

BLAST of Lsi05G002120 vs. NCBI nr
Match: gi|778680077|ref|XP_011651245.1| (PREDICTED: uncharacterized protein LOC105434859 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 1.6e-63
Identity = 130/153 (84.97%), Postives = 139/153 (90.85%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           MDPRISFSNDFVETKQ LK+ENIYREAPVSS+FEFSVKDRCMISADEIFFQGKLLPLKD 
Sbjct: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
               RN++LVKTTLRDELQVNEEE++     SFPKFTKISS SCWKEKFGFRKSHFV KK
Sbjct: 61  ---LRNHVLVKTTLRDELQVNEEEDD----TSFPKFTKISSGSCWKEKFGFRKSHFVAKK 120

Query: 121 QSRNQGVLKTVEEEEKTSVFLHEDLINIARKNG 154
           QSRN+ VLKTVEEE++TSVFLHEDLINIARKNG
Sbjct: 121 QSRNEVVLKTVEEEDRTSVFLHEDLINIARKNG 146

[Close]

BLAST of Lsi05G002120 vs. NCBI nr
Match: gi|659112238|ref|XP_008456129.1| (PREDICTED: uncharacterized protein LOC103496160 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 4.6e-63
Identity = 128/153 (83.66%), Postives = 140/153 (91.50%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           MDPRISFSNDFVETKQ LK+ENIYREAPVSS+FEFSVKDRCMISADEIFFQGKLLPLKD 
Sbjct: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
               RN++LVKTTLRDELQVNEE    ++++SFPKFTKISS+SCWKEKFGFRK HFV KK
Sbjct: 61  ---LRNHVLVKTTLRDELQVNEE----EDDISFPKFTKISSSSCWKEKFGFRKPHFVAKK 120

Query: 121 QSRNQGVLKTVEEEEKTSVFLHEDLINIARKNG 154
           QSRN+ VLKTVEEE++TSVFLHEDLINIARKNG
Sbjct: 121 QSRNEVVLKTVEEEDRTSVFLHEDLINIARKNG 146

[Close]

BLAST of Lsi05G002120 vs. NCBI nr
Match: gi|1009150202|ref|XP_015892893.1| (PREDICTED: uncharacterized protein LOC107427073 [Ziziphus jujuba])

HSP 1 Score: 135.6 bits (340), Expect = 7.4e-29
Identity = 76/144 (52.78%), Postives = 106/144 (73.61%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQ-ALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKD 60
           MDPRISFSNDF +T Q ++K +NIYREAPVSS+FEFSV +  MISADE  F+G LLPLKD
Sbjct: 1   MDPRISFSNDFADTTQLSIKHDNIYREAPVSSDFEFSVNNYKMISADEAIFEGMLLPLKD 60

Query: 61  KDSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPK 120
             +    N   KTTL+DEL +++++E+  E++ F + +K  S   WKE+ G +K+H + K
Sbjct: 61  NST----NQPRKTTLKDELLLDDDDEDNYEQM-FLRPSK--SLGRWKERLGLKKAHILSK 120

Query: 121 KQSRNQGVLKTVEEEEKTSVFLHE 144
           K ++N G+L+ V EEE+TS+F+HE
Sbjct: 121 KANKNDGILERVVEEERTSMFVHE 137

[Close]

BLAST of Lsi05G002120 vs. NCBI nr
Match: gi|743924714|ref|XP_011006485.1| (PREDICTED: uncharacterized protein LOC105112475 [Populus euphratica])

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 77/143 (53.85%), Postives = 98/143 (68.53%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           +DPRISFSNDFV+ +QA+K E+ YREAPVS++FEFSVK+  MI ADEIFF+G +LPL  K
Sbjct: 14  IDPRISFSNDFVDAQQAIKYESSYREAPVSTDFEFSVKNYSMIPADEIFFKGTMLPL--K 73

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
           D+C+ N+ L K TLRDEL V++E  +         F    S+  WKEK   ++ HF PKK
Sbjct: 74  DNCT-NSQLRKMTLRDELLVDDEYSD--------AFPTPKSSGWWKEKLRLKRGHFTPKK 133

Query: 121 QSRNQGVLKTVEEEEKTSVFLHE 144
             RN+GVL  V EE    VF+HE
Sbjct: 134 SDRNRGVLDRVVEER--PVFVHE 143

[Close]

BLAST of Lsi05G002120 vs. NCBI nr
Match: gi|223542158|gb|EEF43702.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 132.1 bits (331), Expect = 8.2e-28
Identity = 79/152 (51.97%), Postives = 104/152 (68.42%), Query Frame = 1


Query: 1   MDPRISFSNDFVETKQALKIENIYREAPVSSEFEFSVKDRCMISADEIFFQGKLLPLKDK 60
           MDPRISFS+DFV+T++A+K E  YREAPVSS+FEFSV++  MI ADEIF +G +LP   K
Sbjct: 19  MDPRISFSSDFVDTQEAIKFETNYREAPVSSDFEFSVRNYSMIPADEIFCKGMILP--SK 78

Query: 61  DSCSRNNLLVKTTLRDELQVNEEEEEEDEEVSFPKFTKISSASCWKEKFGFRKSHFVPKK 120
           D+C+  N L K TLRD+L      +++D+  SFP+  K  S   WKE+ G ++ H V KK
Sbjct: 79  DNCT--NQLRKMTLRDKLL-----DDDDDFDSFPRVQK--STGWWKERLGLKRGHIVTKK 138

Query: 121 QSRNQGVLKTVEEEEKTSVFLHEDLINIARKN 153
             RN GVL+ +  EEK  VFLHE+   +A KN
Sbjct: 139 GDRNHGVLERI-VEEKRHVFLHEE--GLAGKN 156

The following BLAST results are available for this feature:

BLAST of Lsi05G002120 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G002120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L727_CUCSA	1.1e-63	84.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207340 PE=4 SV=1	[more]
B9RYJ3_RICCO	5.7e-28	51.97	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813680 PE=4 SV=1	[more]
B9N4X7_POPTR	1.1e-26	52.45	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14880g PE=4 SV=1	[more]
M5VPA3_PRUPE	4.1e-26	52.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011991mg PE=4 SV=1	[more]
B9HS01_POPTR	4.1e-26	53.47	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s10560g PE=4 SV=1	[more]

BLAST of Lsi05G002120 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66800.1	2.3e-12	37.50	unknown protein	[more]
AT4G34419.1	1.9e-11	40.32	unknown protein	[more]
AT3G50640.1	6.3e-10	37.23	unknown protein	[more]
AT3G19200.1	1.2e-08	43.33	unknown protein	[more]

BLAST of Lsi05G002120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680077\|ref\|XP_011651245.1\|	1.6e-63	84.97	PREDICTED: uncharacterized protein LOC105434859 [Cucumis sativus]	[more]
gi\|659112238\|ref\|XP_008456129.1\|	4.6e-63	83.66	PREDICTED: uncharacterized protein LOC103496160 [Cucumis melo]	[more]
gi\|1009150202\|ref\|XP_015892893.1\|	7.4e-29	52.78	PREDICTED: uncharacterized protein LOC107427073 [Ziziphus jujuba]	[more]
gi\|743924714\|ref\|XP_011006485.1\|	1.7e-28	53.85	PREDICTED: uncharacterized protein LOC105112475 [Populus euphratica]	[more]
gi\|223542158\|gb\|EEF43702.1\|	8.2e-28	51.97	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0036065	fucosylation
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0032580	Golgi cisterna membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008417	fucosyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002120.1	Lsi05G002120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31722	FAMILY NOT NAMED	coord: 1..138 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002120	Csa3G207340	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002120	CSPI03G18490	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002120	Cucsa.244340	Cucumber (Gy14) v1	cgylsiB404
Lsi05G002120	CmaCh16G003550	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G002120	Cla013069	Watermelon (97103) v1	lsiwmB361
Lsi05G002120	MELO3C019512	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002120	ClCG05G010020	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002120	MELO3C019512.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002120	Cla97C05G092430	Watermelon (97103) v2	lsiwmbB329
Lsi05G002120	Bhi01G001258	Wax gourd	lsiwgoB431
Lsi05G002120	CsGy3G018340	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002120	CsaV3_3G018550	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002120	Silver-seed gourd	carlsiB346
Lsi05G002120	Silver-seed gourd	carlsiB595
Lsi05G002120	Silver-seed gourd	carlsiB737
Lsi05G002120	Cucumber (Chinese Long) v3	cuclsiB562
Lsi05G002120	Watermelon (97103) v2	lsiwmbB326
Lsi05G002120	Watermelon (97103) v2	lsiwmbB317
Lsi05G002120	Bottle gourd (USVL1VR-Ls)	lsilsiB080
Lsi05G002120	Bottle gourd (USVL1VR-Ls)	lsilsiB132
Lsi05G002120	Cucumber (Gy14) v1	cgylsiB369
Lsi05G002120	Cucurbita maxima (Rimu)	cmalsiB127
Lsi05G002120	Cucurbita maxima (Rimu)	cmalsiB493
Lsi05G002120	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G002120	Cucurbita moschata (Rifu)	cmolsiB116
Lsi05G002120	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G002120	Cucurbita moschata (Rifu)	cmolsiB478
Lsi05G002120	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G002120	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G002120	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G002120	Wild cucumber (PI 183967)	cpilsiB541
Lsi05G002120	Cucumber (Chinese Long) v2	culsiB527
Lsi05G002120	Melon (DHL92) v3.5.1	lsimeB346
Lsi05G002120	Melon (DHL92) v3.5.1	lsimeB388
Lsi05G002120	Watermelon (Charleston Gray)	lsiwcgB330
Lsi05G002120	Watermelon (97103) v1	lsiwmB380
Lsi05G002120	Cucumber (Gy14) v2	cgyblsiB496
Lsi05G002120	Melon (DHL92) v3.6.1	lsimedB363
Lsi05G002120	Melon (DHL92) v3.6.1	lsimedB409