CSPI03G18490 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCAAGAATCTCATTTTCAAATGATTTTGTTGAAACAAAACAGCCATTAAAGCTTGAAAATATATACAGAGAAGCTCCTGTTTCTTCTGATTTTGAGTTTAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTTTTTCAAGGGAAGTTGTTGCCATTGAAGGACAGTTTAAGGAATCATGTGTTGGTTAAGACAACATTAAGAGATGAGTTGCAAGTGAATGAAGAAGAAGATGATACTTCATTTCCCAAGTTCACAAAAATTTCTTCAGGTAGCTGTTGGAAGGAGAAATTTGGTTTTAGGAAATCTCATTTTGTTGCAAAGAAACAGAGTAGAAATGAAGTGGTTTTGAAAACTGTTGAAGAAGAAGATAGAACTTCTGTTTTTCTTCATGAAGACCTCATTAATATTGCGAGAAAGAATGGGTAA ATGGATCCAAGAATCTCATTTTCAAATGATTTTGTTGAAACAAAACAGCCATTAAAGCTTGAAAATATATACAGAGAAGCTCCTGTTTCTTCTGATTTTGAGTTTAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTTTTTCAAGGGAAGTTGTTGCCATTGAAGGACAGTTTAAGGAATCATGTGTTGGTTAAGACAACATTAAGAGATGAGTTGCAAGTGAATGAAGAAGAAGATGATACTTCATTTCCCAAGTTCACAAAAATTTCTTCAGGTAGCTGTTGGAAGGAGAAATTTGGTTTTAGGAAATCTCATTTTGTTGCAAAGAAACAGAGTAGAAATGAAGTGGTTTTGAAAACTGTTGAAGAAGAAGATAGAACTTCTGTTTTTCTTCATGAAGACCTCATTAATATTGCGAGAAAGAATGGGTAA ATGGATCCAAGAATCTCATTTTCAAATGATTTTGTTGAAACAAAACAGCCATTAAAGCTTGAAAATATATACAGAGAAGCTCCTGTTTCTTCTGATTTTGAGTTTAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTTTTTCAAGGGAAGTTGTTGCCATTGAAGGACAGTTTAAGGAATCATGTGTTGGTTAAGACAACATTAAGAGATGAGTTGCAAGTGAATGAAGAAGAAGATGATACTTCATTTCCCAAGTTCACAAAAATTTCTTCAGGTAGCTGTTGGAAGGAGAAATTTGGTTTTAGGAAATCTCATTTTGTTGCAAAGAAACAGAGTAGAAATGAAGTGGTTTTGAAAACTGTTGAAGAAGAAGATAGAACTTCTGTTTTTCTTCATGAAGACCTCATTAATATTGCGAGAAAGAATGGGTAA
BLAST of CSPI03G18490 vs. TrEMBL
Match: A0A0A0L727_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207340 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of CSPI03G18490 vs. TrEMBL
Match: B9N4X7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14880g PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 4.5e-30 Identity = 79/136 (58.09%), Postives = 96/136 (70.59%), Query Frame = 1
BLAST of CSPI03G18490 vs. TrEMBL
Match: B9RYJ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813680 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.4e-28 Identity = 77/145 (53.10%), Postives = 101/145 (69.66%), Query Frame = 1
BLAST of CSPI03G18490 vs. TrEMBL
Match: M5VPA3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011991mg PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.6e-27 Identity = 75/139 (53.96%), Postives = 96/139 (69.06%), Query Frame = 1
BLAST of CSPI03G18490 vs. TrEMBL
Match: A0A061DZP6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007043 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 7.9e-27 Identity = 73/141 (51.77%), Postives = 97/141 (68.79%), Query Frame = 1
BLAST of CSPI03G18490 vs. TAIR10
Match: AT4G34419.1 (AT4G34419.1 unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 5.3e-14 Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 1
BLAST of CSPI03G18490 vs. TAIR10
Match: AT5G66800.1 (AT5G66800.1 unknown protein) HSP 1 Score: 68.6 bits (166), Expect = 3.8e-12 Identity = 51/144 (35.42%), Postives = 73/144 (50.69%), Query Frame = 1
BLAST of CSPI03G18490 vs. TAIR10
Match: AT3G50640.1 (AT3G50640.1 unknown protein) HSP 1 Score: 67.8 bits (164), Expect = 6.4e-12 Identity = 52/134 (38.81%), Postives = 69/134 (51.49%), Query Frame = 1
BLAST of CSPI03G18490 vs. TAIR10
Match: AT3G19200.1 (AT3G19200.1 unknown protein) HSP 1 Score: 64.7 bits (156), Expect = 5.5e-11 Identity = 48/113 (42.48%), Postives = 61/113 (53.98%), Query Frame = 1
BLAST of CSPI03G18490 vs. TAIR10
Match: AT5G19340.1 (AT5G19340.1 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06 Identity = 32/94 (34.04%), Postives = 49/94 (52.13%), Query Frame = 1
BLAST of CSPI03G18490 vs. NCBI nr
Match: gi|778680077|ref|XP_011651245.1| (PREDICTED: uncharacterized protein LOC105434859 [Cucumis sativus]) HSP 1 Score: 293.5 bits (750), Expect = 2.0e-76 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of CSPI03G18490 vs. NCBI nr
Match: gi|659112238|ref|XP_008456129.1| (PREDICTED: uncharacterized protein LOC103496160 [Cucumis melo]) HSP 1 Score: 287.0 bits (733), Expect = 1.9e-74 Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 1
BLAST of CSPI03G18490 vs. NCBI nr
Match: gi|1009150202|ref|XP_015892893.1| (PREDICTED: uncharacterized protein LOC107427073 [Ziziphus jujuba]) HSP 1 Score: 140.2 bits (352), Expect = 2.9e-30 Identity = 75/138 (54.35%), Postives = 102/138 (73.91%), Query Frame = 1
BLAST of CSPI03G18490 vs. NCBI nr
Match: gi|566166575|ref|XP_006384416.1| (hypothetical protein POPTR_0004s14880g [Populus trichocarpa]) HSP 1 Score: 139.0 bits (349), Expect = 6.4e-30 Identity = 79/136 (58.09%), Postives = 96/136 (70.59%), Query Frame = 1
BLAST of CSPI03G18490 vs. NCBI nr
Match: gi|743924714|ref|XP_011006485.1| (PREDICTED: uncharacterized protein LOC105112475 [Populus euphratica]) HSP 1 Score: 137.5 bits (345), Expect = 1.9e-29 Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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