Cla013069 (gene) Watermelon (97103) v1

NameCla013069
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 10554039 .. 10554609 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCAAGAATTTCATTTTCGAATGATTTTGTTGAAACAAAACAACCATTGAAGCTTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGACAGTTCAAGGAATAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAGTTGCTAATGAATGAAGAAGAAGAAGAAGAAGATGAAGTTTCGTTTCCAAAGTTAACAAAAATTTCTTCTGCTAGCTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCAAAGAAACAGAGTAGAAACGAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCCGTGTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGGTAAGTTCAAAGATTCATTCTTTTTTCTTCTTTTCTTTACAAGTATACAAACAAGTAGAGGTTCAACCTTTTCTATAATGAGGTGTTTTATCATTACGTTCAGATTCAGGTTGTCGATTTGA

mRNA sequence

ATGGATCCAAGAATTTCATTTTCGAATGATTTTGTTGAAACAAAACAACCATTGAAGCTTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGACAGTTCAAGGAATAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAGTTGCTAATGAATGAAGAAGAAGAAGAAGAAGATGAAGTTTCGTTTCCAAAGTTAACAAAAATTTCTTCTGCTAGCTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCAAAGAAACAGAGTAGAAACGAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCCGTGTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGATTCAGGTTGTCGATTTGA

Coding sequence (CDS)

ATGGATCCAAGAATTTCATTTTCGAATGATTTTGTTGAAACAAAACAACCATTGAAGCTTGAGAATATTTACAGAGAAGCACCTGTTTCTTCTGATTTTGAGTTCAGTGTGAAGGATAGATGTATGATATCAGCAGATGAGATTTTCTTTCAGGGGAAGTTGCTGCCATTGAAGGACAGTTCAAGGAATAATAATCTCTTGGTTAAGACAACTTTAAGAGATGAGTTGCTAATGAATGAAGAAGAAGAAGAAGAAGATGAAGTTTCGTTTCCAAAGTTAACAAAAATTTCTTCTGCTAGCTGCTGGAAGGAGAAATTTGGGTTCAGGAAATCTCATTTTGTTCCAAAGAAACAGAGTAGAAACGAAGGGGTTTTGAAAACTGTTGAAGAAGAAGAGAAAACTTCCGTGTTTCTTCATGAAGATCTCATAAATATTGCAAGAAAAAATGGATTCAGGTTGTCGATTTGA

Protein sequence

MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDSSRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSRNEGVLKTVEEEEKTSVFLHEDLINIARKNGFRLSI
BLAST of Cla013069 vs. TrEMBL
Match: A0A0A0L727_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207340 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 5.4e-66
Identity = 133/150 (88.67%), Postives = 139/150 (92.67%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS
Sbjct: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
            R N++LVKTTLRDEL +N   EEED+ SFPK TKISS SCWKEKFGFRKSHFV KKQSR
Sbjct: 61  LR-NHVLVKTTLRDELQVN---EEEDDTSFPKFTKISSGSCWKEKFGFRKSHFVAKKQSR 120

Query: 121 NEGVLKTVEEEEKTSVFLHEDLINIARKNG 151
           NE VLKTVEEE++TSVFLHEDLINIARKNG
Sbjct: 121 NEVVLKTVEEEDRTSVFLHEDLINIARKNG 146

BLAST of Cla013069 vs. TrEMBL
Match: B9RYJ3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813680 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.2e-30
Identity = 79/149 (53.02%), Postives = 103/149 (69.13%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           MDPRISFS+DFV+T++ +K E  YREAPVSSDFEFSV++  MI ADEIF +G +LP KD+
Sbjct: 19  MDPRISFSSDFVDTQEAIKFETNYREAPVSSDFEFSVRNYSMIPADEIFCKGMILPSKDN 78

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
             N   L K TLRD+LL    ++++D  SFP++ K  S   WKE+ G ++ H V KK  R
Sbjct: 79  CTNQ--LRKMTLRDKLL----DDDDDFDSFPRVQK--STGWWKERLGLKRGHIVTKKGDR 138

Query: 121 NEGVLKTVEEEEKTSVFLHEDLINIARKN 150
           N GVL+ +  EEK  VFLHE+   +A KN
Sbjct: 139 NHGVLERI-VEEKRHVFLHEE--GLAGKN 156

BLAST of Cla013069 vs. TrEMBL
Match: B9N4X7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14880g PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-28
Identity = 76/140 (54.29%), Postives = 94/140 (67.14%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           +DPRISFSNDFV+ +Q +K E+ YREAPVS+DFEFSVK+  MI ADEIFF+G +LPLKD+
Sbjct: 19  IDPRISFSNDFVDAQQAIKYESSYREAPVSTDFEFSVKNYSMIPADEIFFKGTMLPLKDN 78

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
             N+ L  K TLRDELL+  ++E  D    PK     S+  WKEK   ++ HF  KK  R
Sbjct: 79  CTNSQLR-KMTLRDELLV--DDEYNDAFPTPK-----SSGWWKEKLWLKRGHFTLKKSDR 138

Query: 121 NEGVLKTVEEEEKTSVFLHE 141
           N  VL  V EE    VF+HE
Sbjct: 139 NSAVLDRVVEER--PVFVHE 148

BLAST of Cla013069 vs. TrEMBL
Match: B9HS01_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s10560g PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.8e-28
Identity = 76/141 (53.90%), Postives = 94/141 (66.67%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           MDPRISFSNDF + K+  K E+ YREAPVS+DFEFSVK+  MI ADEIFF+G +LPLKD+
Sbjct: 19  MDPRISFSNDFADAKKANKYESSYREAPVSTDFEFSVKNDSMIPADEIFFEGTMLPLKDN 78

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
             N     K TLRDELL+++E +     +FP   KIS    WKEK G ++ H  PKK  R
Sbjct: 79  CTNQQR--KMTLRDELLVDDEYDN----AFP-APKIS--GWWKEKLGLKRGHIAPKKSDR 138

Query: 121 NEGVLKTVEEEEKTSVFLHED 142
             GVL  V EE    +F+HE+
Sbjct: 139 VAGVLDRVVEE--MPIFVHEE 148

BLAST of Cla013069 vs. TrEMBL
Match: M5VPA3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011991mg PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.6e-28
Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           MDPRISFSNDF +T+Q +K E  YREAPVSSDFEFSV +  MISADEI F+G LLPLKD+
Sbjct: 1   MDPRISFSNDFADTQQAIKHETSYREAPVSSDFEFSVNNFGMISADEIMFKGTLLPLKDN 60

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
              N L   TTLRDELL++++  +      P+  K  S S WKE+ G +++  VPKK  R
Sbjct: 61  GA-NQLGKTTTLRDELLVDDDYGD----VLPRAPK--SLSRWKERLGLKRAQVVPKKADR 120

Query: 121 NEGVLKTVEEEEKTSVFLHEDLI 144
           +  VL+ + EE +  VF+HE ++
Sbjct: 121 SHSVLERIAEERR-PVFVHEAVL 135

BLAST of Cla013069 vs. NCBI nr
Match: gi|778680077|ref|XP_011651245.1| (PREDICTED: uncharacterized protein LOC105434859 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 7.7e-66
Identity = 133/150 (88.67%), Postives = 139/150 (92.67%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS
Sbjct: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
            R N++LVKTTLRDEL +N   EEED+ SFPK TKISS SCWKEKFGFRKSHFV KKQSR
Sbjct: 61  LR-NHVLVKTTLRDELQVN---EEEDDTSFPKFTKISSGSCWKEKFGFRKSHFVAKKQSR 120

Query: 121 NEGVLKTVEEEEKTSVFLHEDLINIARKNG 151
           NE VLKTVEEE++TSVFLHEDLINIARKNG
Sbjct: 121 NEVVLKTVEEEDRTSVFLHEDLINIARKNG 146

BLAST of Cla013069 vs. NCBI nr
Match: gi|659112238|ref|XP_008456129.1| (PREDICTED: uncharacterized protein LOC103496160 [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 1.0e-65
Identity = 132/150 (88.00%), Postives = 140/150 (93.33%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS
Sbjct: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
            R N++LVKTTLRDEL +N   EEED++SFPK TKISS+SCWKEKFGFRK HFV KKQSR
Sbjct: 61  LR-NHVLVKTTLRDELQVN---EEEDDISFPKFTKISSSSCWKEKFGFRKPHFVAKKQSR 120

Query: 121 NEGVLKTVEEEEKTSVFLHEDLINIARKNG 151
           NE VLKTVEEE++TSVFLHEDLINIARKNG
Sbjct: 121 NEVVLKTVEEEDRTSVFLHEDLINIARKNG 146

BLAST of Cla013069 vs. NCBI nr
Match: gi|1009150202|ref|XP_015892893.1| (PREDICTED: uncharacterized protein LOC107427073 [Ziziphus jujuba])

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33
Identity = 79/141 (56.03%), Postives = 106/141 (75.18%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQ-PLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKD 60
           MDPRISFSNDF +T Q  +K +NIYREAPVSSDFEFSV +  MISADE  F+G LLPLKD
Sbjct: 1   MDPRISFSNDFADTTQLSIKHDNIYREAPVSSDFEFSVNNYKMISADEAIFEGMLLPLKD 60

Query: 61  SSRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQS 120
           +S N     KTTL+DELL+++++E+  E  F + +K  S   WKE+ G +K+H + KK +
Sbjct: 61  NSTNQPR--KTTLKDELLLDDDDEDNYEQMFLRPSK--SLGRWKERLGLKKAHILSKKAN 120

Query: 121 RNEGVLKTVEEEEKTSVFLHE 141
           +N+G+L+ V EEE+TS+F+HE
Sbjct: 121 KNDGILERVVEEERTSMFVHE 137

BLAST of Cla013069 vs. NCBI nr
Match: gi|743924714|ref|XP_011006485.1| (PREDICTED: uncharacterized protein LOC105112475 [Populus euphratica])

HSP 1 Score: 140.2 bits (352), Expect = 3.1e-30
Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           +DPRISFSNDFV+ +Q +K E+ YREAPVS+DFEFSVK+  MI ADEIFF+G +LPLKD+
Sbjct: 14  IDPRISFSNDFVDAQQAIKYESSYREAPVSTDFEFSVKNYSMIPADEIFFKGTMLPLKDN 73

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
             N+ L  K TLRDELL+  ++E  D    PK     S+  WKEK   ++ HF PKK  R
Sbjct: 74  CTNSQLR-KMTLRDELLV--DDEYSDAFPTPK-----SSGWWKEKLRLKRGHFTPKKSDR 133

Query: 121 NEGVLKTVEEEEKTSVFLHE 141
           N GVL  V EE    VF+HE
Sbjct: 134 NRGVLDRVVEER--PVFVHE 143

BLAST of Cla013069 vs. NCBI nr
Match: gi|223542158|gb|EEF43702.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 138.7 bits (348), Expect = 8.9e-30
Identity = 79/149 (53.02%), Postives = 103/149 (69.13%), Query Frame = 1

Query: 1   MDPRISFSNDFVETKQPLKLENIYREAPVSSDFEFSVKDRCMISADEIFFQGKLLPLKDS 60
           MDPRISFS+DFV+T++ +K E  YREAPVSSDFEFSV++  MI ADEIF +G +LP KD+
Sbjct: 19  MDPRISFSSDFVDTQEAIKFETNYREAPVSSDFEFSVRNYSMIPADEIFCKGMILPSKDN 78

Query: 61  SRNNNLLVKTTLRDELLMNEEEEEEDEVSFPKLTKISSASCWKEKFGFRKSHFVPKKQSR 120
             N   L K TLRD+LL    ++++D  SFP++ K  S   WKE+ G ++ H V KK  R
Sbjct: 79  CTNQ--LRKMTLRDKLL----DDDDDFDSFPRVQK--STGWWKERLGLKRGHIVTKKGDR 138

Query: 121 NEGVLKTVEEEEKTSVFLHEDLINIARKN 150
           N GVL+ +  EEK  VFLHE+   +A KN
Sbjct: 139 NHGVLERI-VEEKRHVFLHEE--GLAGKN 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L727_CUCSA5.4e-6688.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207340 PE=4 SV=1[more]
B9RYJ3_RICCO6.2e-3053.02Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813680 PE=4 SV=1[more]
B9N4X7_POPTR1.5e-2854.29Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14880g PE=4 SV=1[more]
B9HS01_POPTR5.8e-2853.90Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s10560g PE=4 SV=1[more]
M5VPA3_PRUPE7.6e-2852.45Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011991mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778680077|ref|XP_011651245.1|7.7e-6688.67PREDICTED: uncharacterized protein LOC105434859 [Cucumis sativus][more]
gi|659112238|ref|XP_008456129.1|1.0e-6588.00PREDICTED: uncharacterized protein LOC103496160 [Cucumis melo][more]
gi|1009150202|ref|XP_015892893.1|1.7e-3356.03PREDICTED: uncharacterized protein LOC107427073 [Ziziphus jujuba][more]
gi|743924714|ref|XP_011006485.1|3.1e-3055.71PREDICTED: uncharacterized protein LOC105112475 [Populus euphratica][more]
gi|223542158|gb|EEF43702.1|8.9e-3053.02conserved hypothetical protein [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0036065 fucosylation
biological_process GO:0006486 protein glycosylation
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
cellular_component GO:0032580 Golgi cisterna membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0008417 fucosyltransferase activity
molecular_function GO:0008233 peptidase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013069Cla013069.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31722FAMILY NOT NAMEDcoord: 1..135
score: 1.8

The following gene(s) are paralogous to this gene:

None