Lsi04G023140 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G023140
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionErgosterol biosynthetic protein 28
Locationchr04 : 30355329 .. 30358068 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTCCATTTTGTGAGATCGAGAGACGGGAATTCCTGTAGATCTCGGTGAAATGAAGCTGCTAGGATGGTGGCTGATGCTGGTAGGTTCGCTCCGATTGGCCTCCGTTTGGTTTGGATTCTTCGACATATGGGCCTTGAGGCTCGCCGTCTTCTCAAACACTACCAGTAATCTCCCTCTCTCGAAAATCTCAGTCATTCATTAGTTTAGGTTCTGCAACTCATGTTCAAAATGTGCATTCTCGTTCTATTGCATCCAGATGAATGAATCTAGTACTGTTATCTCTCTGGTACTCCCGTGACTAATTGAATTCCACCGAAATCAAAATTCGTAGTATGTCTTTTATTGCGATGACGATGTGTTATCACGGATTGGAGTTGTTGTCCTCTGTTTTGATCCGTGACCTAAGGCCGAAGACCTTTTGGCTGAACTTTTGTTGTCAGAATTCATTTTTTTTTCTTCTAGGCAATGCTTAACTCTGTATGCATATTTCATATTTTATAAATCAAAGAGGTGTAAAGTCGGAAGAAGGACGAATTTTTTAGGTTCCTTATGATCGCGTTTCTTTCTACATCGATAGTGAAATTCGTAAATTGGAAGCTAATTACCTCTTTGAAGTTTCTTTTCTTGAGCATACTGGCTTGCCTACAAAGTCAATCCACTTAATCAATTCTTAAGCCTGAAAAATGAGTTCAAACAGATACTTCGGTTGTAGTTTTTGAACTCGAAATCATATGGTAATCTAGTCTGCCATTCTGTTGCTCCTTTAGTACACCGAGTATCGAGTTTTCTCCAATTGTGGGATAATGGAATTATCAATTTCCTCTATAATTTCATGCCATGCGTACATCCGTTTTGACTAATTTCATGCGTACATCCGTTTTCACACTAAATGTGATGTATGTATACAGTATCCCCTGATTGGAAATTTGTATATCTTCTCATTTATAAACTTCTATAGTTGTATTACATAGTCGATATTCTTTATAGGAGGAAGTATAGACTATCAAGATGGCAAGATGGCAGATTTTTATTAATTTTTACTTTTATTTTTTTTGCTTGGGAAAATTGTGTTAAAAGGAAAAGCTAGCATGGTTAGGAATAAGGATATATCCTGGTGCTAAAGTTTTATTCGTCTGCCATATGAACTTGAAGGTGGATGGAGTAGTGTGTTAATTTGTTTTGATAACCATGCCATAATCAAATGACACCATGGCTCCTAGTCTGACGCAACATACAATATGCTCATTACCAGAATTTTATCGAACTAGATATTAGTGAAATGTTTTCCCCTTTCTGTAAGTTTCTCCATTTTTCCAATTTTGTTTGGCTATTTTATCCTGTTTTAAATTTTAATCAATGAATGTGTTAGTTTTTGTACAAATATTATGTTTCATTGTTATGGAGATGTAAAATTATTACTGATTAAGAAACTTTACCTATGACATTATGATTGGTTTCTTCATTCATTTATTTTGTTTTAAATATTTTTCACTGTGAACTCAAACTTTACTTTGATCAATGAAGTTTAAAATATAGATTATTAGTTTTAAAATTGGAAATTATAATTTGTGGTTTACATATAAGATCTCAGAATTTAATGTCATGTTAATTTATTAATAACACTAGAAGCTTAGACTATTATGTTAGATAAAAATTGTTTATTTAAAGTGTTTCTTAATCTTCTCTTTATGTATGGACTCAAAACATTTGTGATAATTATTTTTAGTTCTAGAAGCATAGACTTTATGTTGGAGAAAATTTCTTCTATCTTCTTCACATATGCGTGGGCTTAAATTTCACGCTGATTAATAAATTTAACATGTGGGATGGTATTATAGTAAATAGGAAAATAACTATGTATGGATTTCAATGTGAGGTCCCCTATTATAATGTTTAAATTATTTTTAAATTCTAATTTATTTTTCAAGTTAAGGTTAATGTAACTATGTAAATTATTCCTGGTGCCTATTCATGTCAATATCTTATGGCATGCTTAATCCTGAATATTCTTCTCTCTTGCTGTCTTTTGTGATAGTGACTGAAGTTCATGGAAGGACATTCGGAGTGTGGACTCTCTTAACTTGCACCCTTTGCATTCTCTGTGCACTCAACCTTGAGAATAGGCCCATTTATTTGGCGACATTTTTGTCGTTCATCTATGCTTTGGGGCATTTCTTAACCGAATACTTGATATATCATACCATGTCCATTGCAAATTTGACAACTGTTGGCATCTTTGCGGGTATGATCGCTAGAATTAAATCCATCACATCATATGTTGAGTTGGATTTGAACTTTTCTCACACCTTTTGCTCTGGTATTTTTAAATCTTGAACTAAAACAAAAAGTTTATCACAAGAATTTATCTGGCTGAGCCTATATATACTACTATCAGATCTAATGTGTAACTACTGTAAAGCTGAGTACTCTTTCTCATGACACGATAATAAATTAATTGGCCATTTCAGTCGATCGAAGACTGATTATGTATTGTTCCCATTCATAGTATTGCTTATATTCTGAAACATGATATTTGTTACTCAACAAGAGAAGAAATAATGCATGTTGTTTAGCCTTTTGTTTCTGCCGTCAAACTTTGATTAGACATAAAGATAATTTATTGATGTTAAACTTTTTGTTAACAGGTACATCAATAATTTGGATGCTGCTCCAGTGGAATGCACACCAAAAAATTCACCCCAAACATTCTTGATACGAGTAGATGCACAAATTTGA

mRNA sequence

CTTTTTCCATTTTGTGAGATCGAGAGACGGGAATTCCTGTAGATCTCGGTGAAATGAAGCTGCTAGGATGGTGGCTGATGCTGGTAGGTTCGCTCCGATTGGCCTCCGTTTGGTTTGGATTCTTCGACATATGGGCCTTGAGGCTCGCCGTCTTCTCAAACACTACCATGACTGAAGTTCATGGAAGGACATTCGGAGTGTGGACTCTCTTAACTTGCACCCTTTGCATTCTCTGTGCACTCAACCTTGAGAATAGGCCCATTTATTTGGCGACATTTTTGTCGTTCATCTATGCTTTGGGGCATTTCTTAACCGAATACTTGATATATCATACCATGTCCATTGCAAATTTGACAACTGTTGGCATCTTTGCGGGTATGATCGCTAGAATTAAATCCATCACATCATATGTTGAGTTGGATTTGAACTTTTCTCACACCTTTTGCTCTGATCTAATGTGTAACTACTGTAAAGCTGAGTACATCAATAATTTGGATGCTGCTCCAGTGGAATGCACACCAAAAAATTCACCCCAAACATTCTTGATACGAGTAGATGCACAAATTTGA

Coding sequence (CDS)

ATGAAGCTGCTAGGATGGTGGCTGATGCTGGTAGGTTCGCTCCGATTGGCCTCCGTTTGGTTTGGATTCTTCGACATATGGGCCTTGAGGCTCGCCGTCTTCTCAAACACTACCATGACTGAAGTTCATGGAAGGACATTCGGAGTGTGGACTCTCTTAACTTGCACCCTTTGCATTCTCTGTGCACTCAACCTTGAGAATAGGCCCATTTATTTGGCGACATTTTTGTCGTTCATCTATGCTTTGGGGCATTTCTTAACCGAATACTTGATATATCATACCATGTCCATTGCAAATTTGACAACTGTTGGCATCTTTGCGGGTATGATCGCTAGAATTAAATCCATCACATCATATGTTGAGTTGGATTTGAACTTTTCTCACACCTTTTGCTCTGATCTAATGTGTAACTACTGTAAAGCTGAGTACATCAATAATTTGGATGCTGCTCCAGTGGAATGCACACCAAAAAATTCACCCCAAACATTCTTGATACGAGTAGATGCACAAATTTGA

Protein sequence

MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCILCALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGMIARIKSITSYVELDLNFSHTFCSDLMCNYCKAEYINNLDAAPVECTPKNSPQTFLIRVDAQI
Homology
[Close]
BLAST of Lsi04G023140 vs. Swiss-Prot
Match: ERG28_ARATH (Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana GN=At1g10030 PE=2 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 8.0e-48
Identity = 93/108 (86.11%), Postives = 101/108 (93.52%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MK LG+WLM+VGSLRLASVWFGFF+IWALRLAVFS TTM+EVHGRTFGVWTLLTCTLC L
Sbjct: 1   MKALGYWLMVVGSLRLASVWFGFFNIWALRLAVFSQTTMSEVHGRTFGVWTLLTCTLCFL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NLEN+P+YLATFLSFIYALGHFLTEYL Y TM+IANL+TVG FAG
Sbjct: 61  CAFNLENKPLYLATFLSFIYALGHFLTEYLFYQTMTIANLSTVGFFAG 108

[Close]
BLAST of Lsi04G023140 vs. Swiss-Prot
Match: ERG28_HUMAN (Probable ergosterol biosynthetic protein 28 OS=Homo sapiens GN=C14orf1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 36/118 (30.51%), Postives = 65/118 (55.08%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN--TTMTEVHGRTFGVWTLLTCTLC 60
           + +L  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  ILCALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGMIARIKSI 117
            LCA+++ N+ +Y  T  +F+ ALGHFL+E  +Y T +     T+G+ A ++    SI
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----PTIGVLAPLMVASFSI 118

[Close]
BLAST of Lsi04G023140 vs. Swiss-Prot
Match: ERG28_PONAB (Probable ergosterol biosynthetic protein 28 OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 36/118 (30.51%), Postives = 65/118 (55.08%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN--TTMTEVHGRTFGVWTLLTCTLC 60
           + +L  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  ILCALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGMIARIKSI 117
            LCA+++ N+ +Y  T  +F+ ALGHFL+E  +Y T +     T+G+ A ++    SI
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----PTIGVLAPLMVASFSI 118

[Close]
BLAST of Lsi04G023140 vs. Swiss-Prot
Match: ERG28_MOUSE (Probable ergosterol biosynthetic protein 28 OS=Mus musculus GN=ORF11 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-07
Identity = 36/118 (30.51%), Postives = 65/118 (55.08%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN--TTMTEVHGRTFGVWTLLTCTLC 60
           + +L  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  ILCALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGMIARIKSI 117
            LCA+++ N+ +Y  T  +F+ ALGHFL+E  ++ T +     TVG+ A ++    SI
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVFGTAA----PTVGVLAPLMVASFSI 118

[Close]
BLAST of Lsi04G023140 vs. TrEMBL
Match: A0A0A0LGZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G894520 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.9e-50
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTF  WTLLTCTLCIL
Sbjct: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFIGWTLLTCTLCIL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NLEN+PIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 108

[Close]
BLAST of Lsi04G023140 vs. TrEMBL
Match: A0A068TYI0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034463001 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.3e-49
Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MKLLGWWLMLVGSLRLASVWFGF DIWALRLAVFS TTMTEVHGRTFG+WTLLTCTLCIL
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFVDIWALRLAVFSQTTMTEVHGRTFGIWTLLTCTLCIL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NL+N+P+YLATFLSFIYA GHFLTEYLIYHTM+I NLTTVGIFAG
Sbjct: 61  CAFNLDNKPLYLATFLSFIYAFGHFLTEYLIYHTMAIGNLTTVGIFAG 108

[Close]
BLAST of Lsi04G023140 vs. TrEMBL
Match: V4T1C7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002836mg PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.6e-49
Identity = 98/108 (90.74%), Postives = 101/108 (93.52%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MK LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFG+WTLLTCTLC L
Sbjct: 1   MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGIWTLLTCTLCFL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NLENRP+Y ATFLSFIYA GHFLTEYLIY TM+I NLTTVGIFAG
Sbjct: 61  CAFNLENRPLYWATFLSFIYAFGHFLTEYLIYQTMAIGNLTTVGIFAG 108

[Close]
BLAST of Lsi04G023140 vs. TrEMBL
Match: A0A067H1C1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032986mg PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 6.6e-49
Identity = 98/108 (90.74%), Postives = 101/108 (93.52%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MK LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFG+WTLLTCTLC L
Sbjct: 1   MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGIWTLLTCTLCFL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NLENRP+Y ATFLSFIYA GHFLTEYLIY TM+I NLTTVGIFAG
Sbjct: 61  CAFNLENRPLYWATFLSFIYAFGHFLTEYLIYQTMAIGNLTTVGIFAG 108

[Close]
BLAST of Lsi04G023140 vs. TrEMBL
Match: A0A022R826_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015958mg PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.6e-49
Identity = 97/108 (89.81%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           M+LLGWWLMLVG+LRLASVWFGFFDIWALRLAVFS TTM+EVHGRTFGVWTLLTCTLC L
Sbjct: 11  MELLGWWLMLVGTLRLASVWFGFFDIWALRLAVFSQTTMSEVHGRTFGVWTLLTCTLCFL 70

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CALNLEN+P+YLATFLSFIYALGHFLTEYLIYHTM+I NL TVG FAG
Sbjct: 71  CALNLENKPLYLATFLSFIYALGHFLTEYLIYHTMTIGNLATVGFFAG 118

[Close]
BLAST of Lsi04G023140 vs. TAIR10
Match: AT1G10030.1 (AT1G10030.1 homolog of yeast ergosterol28)

HSP 1 Score: 191.4 bits (485), Expect = 4.5e-49
Identity = 93/108 (86.11%), Postives = 101/108 (93.52%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MK LG+WLM+VGSLRLASVWFGFF+IWALRLAVFS TTM+EVHGRTFGVWTLLTCTLC L
Sbjct: 1   MKALGYWLMVVGSLRLASVWFGFFNIWALRLAVFSQTTMSEVHGRTFGVWTLLTCTLCFL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NLEN+P+YLATFLSFIYALGHFLTEYL Y TM+IANL+TVG FAG
Sbjct: 61  CAFNLENKPLYLATFLSFIYALGHFLTEYLFYQTMTIANLSTVGFFAG 108

[Close]
BLAST of Lsi04G023140 vs. NCBI nr
Match: gi|659132238|ref|XP_008466094.1| (PREDICTED: ergosterol biosynthetic protein 28 [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NLEN+PIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 108

[Close]
BLAST of Lsi04G023140 vs. NCBI nr
Match: gi|449436908|ref|XP_004136234.1| (PREDICTED: ergosterol biosynthetic protein 28 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 8.5e-50
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTF  WTLLTCTLCIL
Sbjct: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFIGWTLLTCTLCIL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NLEN+PIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 108

[Close]
BLAST of Lsi04G023140 vs. NCBI nr
Match: gi|747056120|ref|XP_011074315.1| (PREDICTED: ergosterol biosynthetic protein 28 [Sesamum indicum])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MKLLGWWLMLVG+LRLASVWFGFFDIWALRLAVFS TTMTEVHGRTFGVWTLLTCTLC L
Sbjct: 1   MKLLGWWLMLVGTLRLASVWFGFFDIWALRLAVFSQTTMTEVHGRTFGVWTLLTCTLCFL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NL+N+P+YLATFLSFIYA GHFLTEYLIYHTM+I NLTTVGIFAG
Sbjct: 61  CAFNLDNKPLYLATFLSFIYAFGHFLTEYLIYHTMAIGNLTTVGIFAG 108

[Close]
BLAST of Lsi04G023140 vs. NCBI nr
Match: gi|661895179|emb|CDP00984.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 203.4 bits (516), Expect = 3.2e-49
Identity = 98/108 (90.74%), Postives = 103/108 (95.37%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MKLLGWWLMLVGSLRLASVWFGF DIWALRLAVFS TTMTEVHGRTFG+WTLLTCTLCIL
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFVDIWALRLAVFSQTTMTEVHGRTFGIWTLLTCTLCIL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NL+N+P+YLATFLSFIYA GHFLTEYLIYHTM+I NLTTVGIFAG
Sbjct: 61  CAFNLDNKPLYLATFLSFIYAFGHFLTEYLIYHTMAIGNLTTVGIFAG 108

[Close]
BLAST of Lsi04G023140 vs. NCBI nr
Match: gi|567882277|ref|XP_006433697.1| (hypothetical protein CICLE_v10002836mg [Citrus clementina])

HSP 1 Score: 201.8 bits (512), Expect = 9.4e-49
Identity = 98/108 (90.74%), Postives = 101/108 (93.52%), Query Frame = 1 

Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60
           MK LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFG+WTLLTCTLC L
Sbjct: 1   MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGIWTLLTCTLCFL 60

Query: 61  CALNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAG 109
           CA NLENRP+Y ATFLSFIYA GHFLTEYLIY TM+I NLTTVGIFAG
Sbjct: 61  CAFNLENRPLYWATFLSFIYAFGHFLTEYLIYQTMAIGNLTTVGIFAG 108

The following BLAST results are available for this feature:
BLAST of Lsi04G023140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERG28_ARATH8.0e-4886.11Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana GN=At1g10030 PE=2 SV=... [more]
ERG28_HUMAN1.4e-0730.51Probable ergosterol biosynthetic protein 28 OS=Homo sapiens GN=C14orf1 PE=1 SV=1[more]
ERG28_PONAB1.4e-0730.51Probable ergosterol biosynthetic protein 28 OS=Pongo abelii PE=2 SV=1[more]
ERG28_MOUSE3.1e-0730.51Probable ergosterol biosynthetic protein 28 OS=Mus musculus GN=ORF11 PE=2 SV=1[more]
BLAST of Lsi04G023140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGZ9_CUCSA5.9e-5094.44Uncharacterized protein OS=Cucumis sativus GN=Csa_3G894520 PE=4 SV=1[more]
A0A068TYI0_COFCA2.3e-4990.74Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00034463001 PE=4 SV=1[more]
V4T1C7_9ROSI6.6e-4990.74Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002836mg PE=4 SV=1[more]
A0A067H1C1_CITSI6.6e-4990.74Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032986mg PE=4 SV=1[more]
A0A022R826_ERYGU8.6e-4989.81Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015958mg PE=4 SV=1[more]
BLAST of Lsi04G023140 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10030.14.5e-4986.11 homolog of yeast ergosterol28[more]
BLAST of Lsi04G023140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659132238|ref|XP_008466094.1|1.1e-5298.15PREDICTED: ergosterol biosynthetic protein 28 [Cucumis melo][more]
gi|449436908|ref|XP_004136234.1|8.5e-5094.44PREDICTED: ergosterol biosynthetic protein 28 [Cucumis sativus][more]
gi|747056120|ref|XP_011074315.1|2.5e-4990.74PREDICTED: ergosterol biosynthetic protein 28 [Sesamum indicum][more]
gi|661895179|emb|CDP00984.1|3.2e-4990.74unnamed protein product [Coffea canephora][more]
gi|567882277|ref|XP_006433697.1|9.4e-4990.74hypothetical protein CICLE_v10002836mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR005352Erg28
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019745 pentacyclic triterpenoid biosynthetic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G023140.1Lsi04G023140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005352Erg28PFAMPF03694Erg28coord: 3..100
score: 4.0
NoneNo IPR availablePANTHERPTHR15451FAMILY NOT NAMEDcoord: 1..109
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G023140Csa3G894520Cucumber (Chinese Long) v2culsiB191
Lsi04G023140CSPI03G45920Wild cucumber (PI 183967)cpilsiB189
Lsi04G023140Cucsa.312380Cucumber (Gy14) v1cgylsiB503
Lsi04G023140CmaCh01G014490Cucurbita maxima (Rimu)cmalsiB431
Lsi04G023140CmoCh01G015020Cucurbita moschata (Rifu)cmolsiB420
Lsi04G023140CmoCh09G006030Cucurbita moschata (Rifu)cmolsiB010
Lsi04G023140MELO3C003481Melon (DHL92) v3.5.1lsimeB310
Lsi04G023140ClCG11G014970Watermelon (Charleston Gray)lsiwcgB260
Lsi04G023140MELO3C003481.2Melon (DHL92) v3.6.1lsimedB324
Lsi04G023140Cla97C11G220960Watermelon (97103) v2lsiwmbB267
Lsi04G023140Bhi09G002154Wax gourdlsiwgoB393
Lsi04G023140Cp4.1LG02g03780Cucurbita pepo (Zucchini)cpelsiB455
Lsi04G023140CsGy3G043430Cucumber (Gy14) v2cgyblsiB175
Lsi04G023140Carg00398Silver-seed gourdcarlsiB609
Lsi04G023140CsaV3_3G048380Cucumber (Chinese Long) v3cuclsiB208
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G023140Silver-seed gourdcarlsiB054
Lsi04G023140Silver-seed gourdcarlsiB366
Lsi04G023140Silver-seed gourdcarlsiB575
Lsi04G023140Cucumber (Chinese Long) v3cuclsiB133
Lsi04G023140Cucumber (Chinese Long) v3cuclsiB485
Lsi04G023140Watermelon (97103) v2lsiwmbB259
Lsi04G023140Watermelon (97103) v2lsiwmbB303
Lsi04G023140Wax gourdlsiwgoB369
Lsi04G023140Bottle gourd (USVL1VR-Ls)lsilsiB075
Lsi04G023140Bottle gourd (USVL1VR-Ls)lsilsiB147
Lsi04G023140Cucumber (Gy14) v1cgylsiB263
Lsi04G023140Cucurbita maxima (Rimu)cmalsiB022
Lsi04G023140Cucurbita maxima (Rimu)cmalsiB169
Lsi04G023140Cucurbita maxima (Rimu)cmalsiB728
Lsi04G023140Cucurbita moschata (Rifu)cmolsiB159
Lsi04G023140Cucurbita moschata (Rifu)cmolsiB718
Lsi04G023140Cucurbita pepo (Zucchini)cpelsiB088
Lsi04G023140Cucurbita pepo (Zucchini)cpelsiB636
Lsi04G023140Wild cucumber (PI 183967)cpilsiB118
Lsi04G023140Cucumber (Chinese Long) v2culsiB121
Lsi04G023140Melon (DHL92) v3.5.1lsimeB306
Lsi04G023140Watermelon (Charleston Gray)lsiwcgB303
Lsi04G023140Watermelon (97103) v1lsiwmB291
Lsi04G023140Watermelon (97103) v1lsiwmB334
Lsi04G023140Cucumber (Gy14) v2cgyblsiB108
Lsi04G023140Melon (DHL92) v3.6.1lsimedB320
Lsi04G023140Melon (DHL92) v3.6.1lsimedB350