CmoCh01G015020 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G015020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ergosterol biosynthetic protein 28
Location	Cmo_Chr01 : 11610153 .. 11612577 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTATTTTGTGAGATCGAGGGCGCGAGCGAGGAGCGGCTGGAATTCCTGTAGATCTCAGTGAAATGAAGCTGCTAGGATGGTGGCTGATGCTGGTGGGATCGCTCCGGTTGGCCTCCGTTTGGTTCGGATTCTTCGATATATGGGCGTTGAGGCTCGCCGTCTTCTCCAACACAACCAGTAATCTTTCTCTCTCAGTCATCCATTAATTTAGTTTCTGCAACTCATGTTCAAAATGTGCGTTGTGTTCCTCTCGTATCCAGATGCATGAATCTTGTACTGTTATCTCGTTGATTCTCCCGTGAATATTTGAATTCCATTGAATCAAAATTCGTACTACTTCTTTTATTGCGATGACGATGTATTGTCACGGACTGGAGTTCTTGTCCTGTGTTTCGATCCGTGACCAGAGGGCAAAGACCTAAAGCTGATATTTCCTCTTCTTCTCCTAGGCAATGCTGAACTCTGTTTGAATATTTCATTGACCAAAAAAGTGTACTCGGGAGAAGGACGAAATTTGTTGTGTTTCTTCGTAGATAGTGAAATTCGTAAATTGGAACCTATATATGAAAGTGTTTTTCCTTGATCATACTAGTATTATCTATAAAATCAATCCACGCTATTAATTCTTAAGCCTGCAAAATGAGCTCAATCAGTTTCTTAGGTTTTGGTTTTGAACCCACATTTACTTGGTTAATCTAATCTGCCATTCTGCTGCTCATCTAACACACCCAATATCAAGTTTTCTTCAATTTTGGACTTCTGGGATTCTCCATTTTCACTATAATTTCATGCTATGCGTACATCCGTTTTGATTATTAGATTCTAAACAGACGTTTATCAATGAAGGAGACGATTCGAAATGTGACGTATAAGAGGACTGTATACTTGTATACCTTCTCATTTATAAACTTCTATTTCATACTCAAAATTCTCCACAGAGATTTTTATTTACTTTTATTATTAGTTTTTCTTTGCAAAATTGTGTTGGAGGAATGCCTCCATGGTAGGATATGTCCTGGTGCTTAAGTTTTACTCTCTTGTCATTTGAATTTGAAGGTGAATGAGTTGGAGATGTGTTAACTTGCTTCAAAATGATACCATGGCTCCTATTCTTACACAACATGCAATATGCTCAGTAGTAGAGTTTTATTGAACAAAATATTACTGGAATATTTTTCCCCTCTCCTTATGTTGCTTATTTTCTATTGTTGTTTGGTTATTATATTATGTTTTAATGAGTGAATGTGTTATCTGGATTTAATGTCATGTTCAATTACTACTAACACTAGAAGCTTAGTATGTGTGGATTATAGGAAATTTGTTTATTTATAGTGTTTCTTAATCTTCTCAGTATGTGTGGATTCAGAACATTTGTGATAACTATTATTAGTTACAGAAGCATAGGCTTTATGTTGAGAAAATCGTTCCCTTCTTCTCCTTATGTGTGTGAGCTTGCATTTTAGTAAATAGGAAAAAATAACCAGCATGGATTTCAAGCTAGGTTCCCTATTCTAATATTGCTTTAATTCATCTTTAATTCTAATTTATCTGTCAAGTTAAAGTTCATGTATCTATTTAAATCATGGCTTAACTTTTGGTGCCAATTCATGTCGTTATCTTAGGGCATGCTCAATCCTGACTATTCTGCTCTCTCTTGCTGTCTTTTGTGATAGTGACTGAAGTTCATGGAAGGACATTTGGAGTGTGGACTCTCCTAACTTGCACTCTTTGCATTGTCTGTGCATTCAACCTTGAGAATAAGCCCATTTATTTGGCGACCTTTTTGTCCTTCATCTATGCTTTGGGGCATTTCTTGACCGAACACTTGATATATCATACCATGTCCATCGCGAATCTCACGACCGTTGGCATCTTTGCGGGTATGATTGCTAGATTAAATTCATGACTGATTGAGTTGGATTTGGACTTCCATACCCATTGTCCTTATATCCTATTCTCTTCTTGTATTCTGAAGTCCTAAACTAGAACAAAAAAAAAATTCAGAAGAATTTATCTGAACTGATCCTATATATTGTTATCAAATCTAGTACATAACTAGTGGAAAGCCTGGTACTCTTTTTTATGATATATTTTAGCTAGCCAAGTTCCCATTCACGGTATTGCTTTTATTCTGAAATATGATATTTGTTAAATGATGCTTCTTTTGTTTGGCTTTTTGTTTTTGCCTTCAAACTTTGATTTAAACGTGAAGACCTTCATTGATGTCGAACTTTTTGTTAACAGGGACGTCAATAATATGGATGTTGCTCCAGTGGAACGCACACCAGAGAATTCATCCCAAACATTCTTGATGAGGTAGATGCTTGATTTGAATCTGCAGACGAATTTATTTTCTTAGTTTCAGGGTGTTGAATAAACAAAGAACATTTTCTATACTAGATTAGCTTTGGAAACACTGTT

mRNA sequence

TTCCCTATTTTGTGAGATCGAGGGCGCGAGCGAGGAGCGGCTGGAATTCCTGTAGATCTCAGTGAAATGAAGCTGCTAGGATGGTGGCTGATGCTGGTGGGATCGCTCCGGTTGGCCTCCGTTTGGTTCGGATTCTTCGATATATGGGCGTTGAGGCTCGCCGTCTTCTCCAACACAACCATGACTGAAGTTCATGGAAGGACATTTGGAGTGTGGACTCTCCTAACTTGCACTCTTTGCATTGTCTGTGCATTCAACCTTGAGAATAAGCCCATTTATTTGGCGACCTTTTTGTCCTTCATCTATGCTTTGGGGCATTTCTTGACCGAACACTTGATATATCATACCATGTCCATCGCGAATCTCACGACCGTTGGCATCTTTGCGGGGACGTCAATAATATGGATGTTGCTCCAGTGGAACGCACACCAGAGAATTCATCCCAAACATTCTTGATGAGATTAGCTTTGGAAACACTGTT

Coding sequence (CDS)

ATGAAGCTGCTAGGATGGTGGCTGATGCTGGTGGGATCGCTCCGGTTGGCCTCCGTTTGGTTCGGATTCTTCGATATATGGGCGTTGAGGCTCGCCGTCTTCTCCAACACAACCATGACTGAAGTTCATGGAAGGACATTTGGAGTGTGGACTCTCCTAACTTGCACTCTTTGCATTGTCTGTGCATTCAACCTTGAGAATAAGCCCATTTATTTGGCGACCTTTTTGTCCTTCATCTATGCTTTGGGGCATTTCTTGACCGAACACTTGATATATCATACCATGTCCATCGCGAATCTCACGACCGTTGGCATCTTTGCGGGGACGTCAATAATATGGATGTTGCTCCAGTGGAACGCACACCAGAGAATTCATCCCAAACATTCTTGA

Homology

[Close]

BLAST of CmoCh01G015020 vs. Swiss-Prot
Match: ERG28_ARATH (Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana GN=At1g10030 PE=2 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 7.1e-57
Identity = 105/129 (81.40%), Postives = 119/129 (92.25%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LG+WLM+VGSLRLASVWFGFF+IWALRLAVFS TTM+EVHGRTFGVWTLLTCTLC +
Sbjct: 1   MKALGYWLMVVGSLRLASVWFGFFNIWALRLAVFSQTTMSEVHGRTFGVWTLLTCTLCFL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKP+YLATFLSFIYALGHFLTE+L Y TM+IANL+TVG FAGTSI+WMLL+WN+
Sbjct: 61  CAFNLENKPLYLATFLSFIYALGHFLTEYLFYQTMTIANLSTVGFFAGTSIVWMLLEWNS 120

Query: 121 HQRIHPKHS 130
            ++ H K S
Sbjct: 121 LEQPHSKLS 129

[Close]

BLAST of CmoCh01G015020 vs. Swiss-Prot
Match: ERG28_HUMAN (Probable ergosterol biosynthetic protein 28 OS=Homo sapiens GN=C14orf1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN--TTMTEVHGRTFGVWTLLTCTLC 60
           + +L  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  IVCAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFA 108
            +CA ++ NK +Y  T  +F+ ALGHFL+E  +Y T +     T+G+ A
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----PTIGVLA 109

[Close]

BLAST of CmoCh01G015020 vs. Swiss-Prot
Match: ERG28_PONAB (Probable ergosterol biosynthetic protein 28 OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN--TTMTEVHGRTFGVWTLLTCTLC 60
           + +L  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  IVCAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFA 108
            +CA ++ NK +Y  T  +F+ ALGHFL+E  +Y T +     T+G+ A
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----PTIGVLA 109

[Close]

BLAST of CmoCh01G015020 vs. Swiss-Prot
Match: ERG28_MOUSE (Probable ergosterol biosynthetic protein 28 OS=Mus musculus GN=ORF11 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN--TTMTEVHGRTFGVWTLLTCTLC 60
           + +L  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  IVCAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFA 108
            +CA ++ NK +Y  T  +F+ ALGHFL+E  ++ T +     TVG+ A
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVFGTAA----PTVGVLA 109

[Close]

BLAST of CmoCh01G015020 vs. Swiss-Prot
Match: ERG28_SCHPO (Ergosterol biosynthetic protein 28 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg28 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 29/89 (32.58%), Postives = 48/89 (53.93%), Query Frame = 1


Query: 33  VFSNTT-MTEVHGRTFGVWTLLTCTLCIVCAFNLENKPIYLATFLSFIYALGHFLTEHLI 92
           V+SNT  +  + GRTFG+WTLL+  +   CA+++ N  +Y     ++  A  HFL+E L+
Sbjct: 41  VYSNTNEVNGLQGRTFGIWTLLSAIVRFYCAYHITNPDVYFLCQCTYYLACFHFLSEWLL 100

Query: 93  YHTMSIANLTTVGIFAGTSIIWMLLQWNA 121
           + T ++       I   T  IW + +  A
Sbjct: 101 FRTTNLGPGLLSPIVVSTVSIWFMAKEKA 129

[Close]

BLAST of CmoCh01G015020 vs. TrEMBL
Match: A0A0A0LGZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G894520 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.9e-64
Identity = 121/129 (93.80%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTF  WTLLTCTLCI+
Sbjct: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFIGWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKPIYLATFLSFIYALGHFLTE+LIYHTMSIANLTTVGIFAGTSIIWMLLQWN+
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120

Query: 121 HQRIHPKHS 130
           HQR+HPKHS
Sbjct: 121 HQRVHPKHS 129

[Close]

BLAST of CmoCh01G015020 vs. TrEMBL
Match: A0A0B2PKF5_GLYSO (Ergosterol biosynthetic protein 28 OS=Glycine soja GN=glysoja_017672 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-61
Identity = 114/129 (88.37%), Postives = 121/129 (93.80%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LGWWL+ VG+LRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFG WTLLTCTLC +
Sbjct: 1   MKALGWWLIAVGTLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGTWTLLTCTLCYI 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKP+YLATFLSFIYALGHFLTE+LIYHTM I NLTTVGIFAGTSIIWMLLQWNA
Sbjct: 61  CAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEIKNLTTVGIFAGTSIIWMLLQWNA 120

Query: 121 HQRIHPKHS 130
           H ++H KHS
Sbjct: 121 HSKVHLKHS 129

[Close]

BLAST of CmoCh01G015020 vs. TrEMBL
Match: C6SWX3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G087700 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-61
Identity = 114/129 (88.37%), Postives = 121/129 (93.80%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LGWWL+ VG+LRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFG WTLLTCTLC +
Sbjct: 1   MKALGWWLIAVGTLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGTWTLLTCTLCYI 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKP+YLATFLSFIYALGHFLTE+LIYHTM I NLTTVGIFAGTSIIWMLLQWNA
Sbjct: 61  CAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEIKNLTTVGIFAGTSIIWMLLQWNA 120

Query: 121 HQRIHPKHS 130
           H ++H KHS
Sbjct: 121 HSKVHLKHS 129

[Close]

BLAST of CmoCh01G015020 vs. TrEMBL
Match: A9P8E6_POPTR (Integral membrane family protein OS=Populus trichocarpa GN=POPTR_0002s11330g PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.3e-61
Identity = 113/128 (88.28%), Postives = 121/128 (94.53%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LGWWLMLVGSLRLASVWFGFFDIWALRLAV SNTTMTEVHGRTFGVWTLLTCTLC +
Sbjct: 1   MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVLSNTTMTEVHGRTFGVWTLLTCTLCFL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNL+NKP+YLATFLSFIYA GHFLTE+LIY TM+IANLTTV IFAGTSI+WML+QWNA
Sbjct: 61  CAFNLDNKPLYLATFLSFIYAFGHFLTEYLIYQTMAIANLTTVSIFAGTSIVWMLIQWNA 120

Query: 121 HQRIHPKH 129
           HQ+ HPKH
Sbjct: 121 HQKSHPKH 128

[Close]

BLAST of CmoCh01G015020 vs. TrEMBL
Match: A0A0B2RYC5_GLYSO (Ergosterol biosynthetic protein 28 OS=Glycine soja GN=glysoja_044874 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.6e-61
Identity = 112/129 (86.82%), Postives = 120/129 (93.02%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LGWWL+ VG+LRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFG WTLLTCTLC +
Sbjct: 1   MKALGWWLIAVGTLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGTWTLLTCTLCYI 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKP+YLATFLSFIYA GHFLTE+LIYHTM I NLTTVGIFAGTSI+WMLLQWNA
Sbjct: 61  CAFNLENKPLYLATFLSFIYAFGHFLTEYLIYHTMEIKNLTTVGIFAGTSIVWMLLQWNA 120

Query: 121 HQRIHPKHS 130
           H ++H KHS
Sbjct: 121 HSKVHLKHS 129

[Close]

BLAST of CmoCh01G015020 vs. TAIR10
Match: AT1G10030.1 (AT1G10030.1 homolog of yeast ergosterol28)

HSP 1 Score: 221.1 bits (562), Expect = 4.0e-58
Identity = 105/129 (81.40%), Postives = 119/129 (92.25%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LG+WLM+VGSLRLASVWFGFF+IWALRLAVFS TTM+EVHGRTFGVWTLLTCTLC +
Sbjct: 1   MKALGYWLMVVGSLRLASVWFGFFNIWALRLAVFSQTTMSEVHGRTFGVWTLLTCTLCFL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKP+YLATFLSFIYALGHFLTE+L Y TM+IANL+TVG FAGTSI+WMLL+WN+
Sbjct: 61  CAFNLENKPLYLATFLSFIYALGHFLTEYLFYQTMTIANLSTVGFFAGTSIVWMLLEWNS 120

Query: 121 HQRIHPKHS 130
            ++ H K S
Sbjct: 121 LEQPHSKLS 129

[Close]

BLAST of CmoCh01G015020 vs. NCBI nr
Match: gi|659132238|ref|XP_008466094.1| (PREDICTED: ergosterol biosynthetic protein 28 [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 3.4e-67
Identity = 125/129 (96.90%), Postives = 129/129 (100.00%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCI+
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKPIYLATFLSFIYALGHFLTE+LIYHTMSIANLTTVGIFAGTSIIWMLLQWN+
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120

Query: 121 HQRIHPKHS 130
           HQR+HPKHS
Sbjct: 121 HQRVHPKHS 129

[Close]

BLAST of CmoCh01G015020 vs. NCBI nr
Match: gi|449436908|ref|XP_004136234.1| (PREDICTED: ergosterol biosynthetic protein 28 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 2.7e-64
Identity = 121/129 (93.80%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTF  WTLLTCTLCI+
Sbjct: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFIGWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKPIYLATFLSFIYALGHFLTE+LIYHTMSIANLTTVGIFAGTSIIWMLLQWN+
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120

Query: 121 HQRIHPKHS 130
           HQR+HPKHS
Sbjct: 121 HQRVHPKHS 129

[Close]

BLAST of CmoCh01G015020 vs. NCBI nr
Match: gi|743803115|ref|XP_011017043.1| (PREDICTED: ergosterol biosynthetic protein 28 [Populus euphratica])

HSP 1 Score: 246.9 bits (629), Expect = 1.9e-62
Identity = 115/129 (89.15%), Postives = 123/129 (95.35%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLC +
Sbjct: 1   MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCFI 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNL+NKP+YLATFLSFIYA GHFLTE+LIY TM+IANLTTV IFAGTSI+WML+QWNA
Sbjct: 61  CAFNLDNKPLYLATFLSFIYAFGHFLTEYLIYQTMAIANLTTVSIFAGTSIVWMLIQWNA 120

Query: 121 HQRIHPKHS 130
           HQ+ HPKHS
Sbjct: 121 HQKSHPKHS 129

[Close]

BLAST of CmoCh01G015020 vs. NCBI nr
Match: gi|351722967|ref|NP_001237774.1| (uncharacterized protein LOC100305859 [Glycine max])

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-61
Identity = 114/129 (88.37%), Postives = 121/129 (93.80%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LGWWL+ VG+LRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFG WTLLTCTLC +
Sbjct: 1   MKALGWWLIAVGTLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGTWTLLTCTLCYI 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNLENKP+YLATFLSFIYALGHFLTE+LIYHTM I NLTTVGIFAGTSIIWMLLQWNA
Sbjct: 61  CAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEIKNLTTVGIFAGTSIIWMLLQWNA 120

Query: 121 HQRIHPKHS 130
           H ++H KHS
Sbjct: 121 HSKVHLKHS 129

[Close]

BLAST of CmoCh01G015020 vs. NCBI nr
Match: gi|224063409|ref|XP_002301132.1| (integral membrane family protein [Populus trichocarpa])

HSP 1 Score: 241.9 bits (616), Expect = 6.2e-61
Identity = 113/128 (88.28%), Postives = 121/128 (94.53%), Query Frame = 1


Query: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60
           MK LGWWLMLVGSLRLASVWFGFFDIWALRLAV SNTTMTEVHGRTFGVWTLLTCTLC +
Sbjct: 1   MKALGWWLMLVGSLRLASVWFGFFDIWALRLAVLSNTTMTEVHGRTFGVWTLLTCTLCFL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120
           CAFNL+NKP+YLATFLSFIYA GHFLTE+LIY TM+IANLTTV IFAGTSI+WML+QWNA
Sbjct: 61  CAFNLDNKPLYLATFLSFIYAFGHFLTEYLIYQTMAIANLTTVSIFAGTSIVWMLIQWNA 120

Query: 121 HQRIHPKH 129
           HQ+ HPKH
Sbjct: 121 HQKSHPKH 128

The following BLAST results are available for this feature:

BLAST of CmoCh01G015020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERG28_ARATH	7.1e-57	81.40	Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana GN=At1g10030 PE=2 SV=...	[more]
ERG28_HUMAN	1.8e-07	31.19	Probable ergosterol biosynthetic protein 28 OS=Homo sapiens GN=C14orf1 PE=1 SV=1	[more]
ERG28_PONAB	1.8e-07	31.19	Probable ergosterol biosynthetic protein 28 OS=Pongo abelii PE=2 SV=1	[more]
ERG28_MOUSE	3.9e-07	31.19	Probable ergosterol biosynthetic protein 28 OS=Mus musculus GN=ORF11 PE=2 SV=1	[more]
ERG28_SCHPO	1.5e-06	32.58	Ergosterol biosynthetic protein 28 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of CmoCh01G015020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGZ9_CUCSA	1.9e-64	93.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G894520 PE=4 SV=1	[more]
A0A0B2PKF5_GLYSO	1.5e-61	88.37	Ergosterol biosynthetic protein 28 OS=Glycine soja GN=glysoja_017672 PE=4 SV=1	[more]
C6SWX3_SOYBN	1.5e-61	88.37	Uncharacterized protein OS=Glycine max GN=GLYMA_04G087700 PE=2 SV=1	[more]
A9P8E6_POPTR	4.3e-61	88.28	Integral membrane family protein OS=Populus trichocarpa GN=POPTR_0002s11330g PE=...	[more]
A0A0B2RYC5_GLYSO	5.6e-61	86.82	Ergosterol biosynthetic protein 28 OS=Glycine soja GN=glysoja_044874 PE=4 SV=1	[more]

BLAST of CmoCh01G015020 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10030.1	4.0e-58	81.40	homolog of yeast ergosterol28	[more]

BLAST of CmoCh01G015020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132238\|ref\|XP_008466094.1\|	3.4e-67	96.90	PREDICTED: ergosterol biosynthetic protein 28 [Cucumis melo]	[more]
gi\|449436908\|ref\|XP_004136234.1\|	2.7e-64	93.80	PREDICTED: ergosterol biosynthetic protein 28 [Cucumis sativus]	[more]
gi\|743803115\|ref\|XP_011017043.1\|	1.9e-62	89.15	PREDICTED: ergosterol biosynthetic protein 28 [Populus euphratica]	[more]
gi\|351722967\|ref\|NP_001237774.1\|	2.1e-61	88.37	uncharacterized protein LOC100305859 [Glycine max]	[more]
gi\|224063409\|ref\|XP_002301132.1\|	6.2e-61	88.28	integral membrane family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005352	Erg28

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019745	pentacyclic triterpenoid biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G015020.1	CmoCh01G015020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005352	Erg28	PFAM	PF03694	Erg28	coord: 3..100 score: 1.0
None	No IPR available	PANTHER	PTHR15451	FAMILY NOT NAMED	coord: 1..126 score: 7.2
None	No IPR available	PANTHER	PTHR15451:SF19	ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED	coord: 1..126 score: 7.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G015020	Cucsa.312380	Cucumber (Gy14) v1	cgycmoB0863
CmoCh01G015020	CmaCh01G014490	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G015020	Csa3G894520	Cucumber (Chinese Long) v2	cmocuB441
CmoCh01G015020	MELO3C003481	Melon (DHL92) v3.5.1	cmomeB407
CmoCh01G015020	ClCG11G014970	Watermelon (Charleston Gray)	cmowcgB391
CmoCh01G015020	CSPI03G45920	Wild cucumber (PI 183967)	cmocpiB445
CmoCh01G015020	Lsi04G023140	Bottle gourd (USVL1VR-Ls)	cmolsiB420
CmoCh01G015020	Cp4.1LG02g03780	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G015020	MELO3C003481.2	Melon (DHL92) v3.6.1	cmomedB466
CmoCh01G015020	CsaV3_3G048380	Cucumber (Chinese Long) v3	cmocucB0531
CmoCh01G015020	Cla97C11G220960	Watermelon (97103) v2	cmowmbB437
CmoCh01G015020	Bhi09G002154	Wax gourd	cmowgoB0615
CmoCh01G015020	CsGy3G043430	Cucumber (Gy14) v2	cgybcmoB338
CmoCh01G015020	Carg00398	Silver-seed gourd	carcmoB0922

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G015020	CmoCh09G006030	Cucurbita moschata (Rifu)	cmocmoB019

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G015020	Watermelon (97103) v1	cmowmB456
CmoCh01G015020	Cucurbita pepo (Zucchini)	cmocpeB466
CmoCh01G015020	Silver-seed gourd	carcmoB0873
CmoCh01G015020	Cucurbita maxima (Rimu)	cmacmoB049