Lsi04G019660 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G019660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Chalcone-flavonone isomerase family protein
Location	chr04 : 26726650 .. 26731714 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAGCTACGCTTTTGGGACAATAACTTGGACACAACAAGACTAAAGAATCTCCTCTCTTATCCACTCCTTTCACTCAGAGTATTGAAACAGCAGAAGAAATCTCTATAATGGCTGCAAATGGTGCTGTAAATTCCACCCCATTAAGGCTCCCATCAGCCATTCCCACTGGGAAATGGAATTCAAATCCCAGAATTTGCCTTCTAACAAAACCCCCAATTCCTACTCTCTCCTTGTACCAATTTCAGTCTACTTTCACTCTCAACAGGAACTTCAGATTTTGTTCGAATCTCTCTCTCAAAGCTTCTTCTTCCCTTGCTTCAGGTAATGAAATGTTAAATGATTCTTCCATATCTGCTTCTTTTGAACCTTGTGTTTCATTCTTTTGATGTTAATGGTGAGAAAATCTGGAATGATTCTTGAGTTTCTGCATAAGATCGAGATCGAGCTTTAGGGTCTGTTTGGATTTACGTTCTAAGTGCTTAAAAATGTGGTTTTAAGTGAAAACAAAATTATTTTTATGAGTTTAGAAAGTGAATCTAAATAGACACTCTGTTTTTCAAGTTTGGAGTTTAGGTTTTGATTAATCGAAGTTGAGGGCAATGGTTTATAAAGTTGAAGGTAATATTGAGTAAAGGCTGTGGCGGTTTTGGAGTGATCTTGAACATGAAAAGATGATTTAAACCTTTTGAAAATGACTTGCCAACATGCCCTAAATTTATTTGGCATCGGTTGATTAATGGTATTTCTACAATGTTAGGGTAGGATGTTGTGTAGATTGAGATATTGTATCACTTTTAAACCTATCTTCTTCTCGAACAATGGACCACCAAGTCTCCTCTCGAGGACATTGTCTTAACTACATCAACGACTGTTTTTTTTTCCAATCCTGTAATCTTGTTGTCTATTAGAGTAGGCGTAGGAAGAATAATATTTCATTTTTGTTGTTTTTCTCAGAAAGTAATACTGAAACCCTTTGTTCTTTAATCAATGGGTTACAACAGTTGGAAATGCAGGATATGTGGAGGAACCTTCAACCAATGTAAAATTTCCGACGTCCTTGACTCTGCCGGGCTGCTCAACCTCGCTGTCACTGCTCGGAACAGGTCATTTCATTATGTTTCTACACTGAATTCTACTAAGGAAGACCGATTTTATGAAAATTTAAACTGTTAAAATAATCTGTAGCTCATATATTTTCCTGCAATGTGTTTAAAAGAACCATTAGAATCAAAAGCTCTTGTCATTGTATGCTGCAATTGGTATTTGGTACATAAGTTGCATTGCTGCAGGCAAGAAAATTTGCTTCCAGCTGGAGTCCCTTCCTTTACATAAGTTGCATATGAATATCGTATTCTATAGGCATTATTTTGCATGGTTGGAGTCCCTTCCTGTAGAGGGATGTCCCTTTTTTGTGGACTTGGTATTTTGTATGCCTGTGTATTCTTTCATTTTTTTTCCTCAATGAAAGTTGTTTCTATCTAATAAAAACTTGCAGCTATCGAGAATGAAACGATTTTCGACATCTTCTTTGGATCAAAAGAAAAGAAAAATGAACACCATTCAAGGCGCAGTTTGTTTTAAGAAGTTGACTATTTATTCTACTTTGAGACATATAAACTAAAGAAATTTAGTCTGAGATATTTATTATCCTAATGCTACCTATGAATTTTATACATCCGAAATGTTGATCCTTTTAACGGAACTATATTCTTCCACATGATCTTCATTAGCTGCAAATATTTCAGGTTACAGAGAGAAAGTTTTTGCTATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAATGAATTAAACGCTTGGAGTGGACGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTGTAATAACCGTACATATAATTTATAAATAATTGTATGATTTTAGAAGTTGTGGAAAGTGAGAATGATACTCTCCTTTTCCATTTTTTCCCACGGCTTTGAAGCTTATGTAACTAACTACAAGTTTCTTGTCTTTTAATGGCAGCTCCTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGTAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACAACGGTTGATGAATCTGCATTATCTACCTTTCGTAACATCTTCGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTATGTTTGAATTTTAACTGACTTACATTCTCTTTTCTTTTCCTTCCAGTAATGTTATTGCATGGACATTCTTAATTTCATCTTCGAGCAAGTTTCATTCTGCTTATTCTGATGCAGAGAATCGATGAATTGCAGGTTAGCATCTCAACAGATGGCCCACCAACAGGAATAGAAGCTACAATTGAATCAAATAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACTCCCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAGGACCAAATTTTTCTTGTACTTTTATTAGTTTGAATGAACATTTGGATATGGTTCCACCAAACAAGTTACAAATGAGAGATCGCTACAAGTGTAATACATGTTAGAGAAGGGACCGACTCAAGAATCTGTTACAATGCTATTTGACCTTATCTGCTCAAGAACTTTGACAACCTCTACCATTGTCGGTCGCTGAGCTGGTTCCGGTTCAAGACACTTCAATGCAATGCTAAATACGCCATTAACCTCGTCAACCGGACAACAGCCCAAACTACTGTCAAGTACATATTCTTCCCTTTTCTCCTCAACAACTGTTTTCACCTGTCATTTACATGACACCATGAAAGTTAGATAAGGAATAGCTTGTTGTTCAACTAATATTCTTTTTGTGAATGATGTTTCCAATTTATAGCACTTGAGTATTCAATCCAGTGCCTCATGAAAGATGTCACTGCAACATCTGGGTAGTTGGTGAAATGAATGGCTCACTAGGAAACGGTTTACTCGAACGCATCAATTAAAAACTATCCATTTGTAGAATCAATATGAGTAATCAACCAACCTAAAGGCTGTATGACTTTCTTAGGCTACTGAAGATGGTCCATGATTCACTTACCCATGTCACAAGTTTAGTTCCCTCTTCCATAAATGCCTCATCAGTCGGTTTTTTCCCTGTTAAGAGCTCGAGAAGAACTACACCAAAGCTGTAGACATCTCCTTTCACCGTTGCTCGTCCGGTATCGAAGTATTCTGCCAAAATGAAGTTAGTATTATCCATGTCAAGGGAGCGGTAAAGTAGAATGGCTTGTTAAATTCTACCTGGAGCCAAGTACCCAAATGTGCCTGCCACAATTGTTGATACATGAGTCTTGTCAGGTTCCATCAGTGTCGCCAATCCAAAGTCGGACACTTGGGCGTCCATGTTTTGATCCAACAATATGTTGCTCGACTTGATATCTCTATGTATGATGTGTGGGATGCAGTCGTGATGAAGGTACGATATGCCTCTCGCTGCACCTACTGCTATTTTATACCGTGATGGCCAATCCAAAACCTTTTCATTTGATCTTCCTGCAGTATCATCAAATTTAGGACAGAATAATGTGCTATATCATCACTGAGAAGCTTTAAGAAAACTGAAGGCTTTGATATATATACATACCATGTAGATATGCATACAAACTTCCATTAGGCATCAGCTCATATATAAGGAGATTATAGTGAGGAGCTGTGTAGTATCCGTGAAGCGTCACGATATTCCGATGCTTTATATCTCCCATCGCTTCCAACTCTCTCTCGAATCCTTGATCTCTTTCCGCACTTCCTCTGTTCAGTCTTTTCACAGCAAATGTCATGGAATCACTTAGTGCAAGTTTGTAAACAATCCCATGGCCTCCAGAGCCAATGATGTCCTTATTGTTAAGTTTTAATGTTTTCTTCAGGAATGCATCTGATTTTAAGGACTTTGTTGCTGGAGACTTGAACATTACCATCTTCCCACCTAAGCATATACATTCGAATTGAACTCGTTACTCTCTGCACCGTGTTTAATTTAACAAACTCTACACATTCTCCCAAAAGAAAGTTTCTGCTTTTCAAGTTTGGAAATGATCATACCTGATATCCCATCTTCATAAATCATGTGTCTTCTTTTCCAGCGCTTGTAAAGAAGCAATGTTATGAATATCTTCGATACGACGAAAGCAACACAACTGATTGTGATGTAGAATGCTATAGCCTGGCCTCTATCCATTTGATTCTCCAGACCATGAAAATGTTCAGAACAGGTTTAAATGGAAGACAGCCTCAAACTTGTGACATTTCCTCCATTTAACTCTCCATGAAGGCAGCAAGTTGACGGTCTTTCGACATGTTTCTTGAGTTTCAGTGAGCTGAAGTAGCTGAAGGCTATTCTCTGGTACAACTGTAGATGCAGAAACAACACAATAACACCAATATAGAGATGAAACTAACAACCCCAAGATCCAAGATCTTCGCGGTTGCGCCGAATACATTTCTTCATGAATTTTCTTGACAAAAAGGAACTTCAAGAATGGAGTTGAAAACAAAGAAGCAAAAGAACATTGTTTTGGCTAGAGGATGCAAGATTTCAACAGAGAAACACAACAAAACCAAAGCCAAAAAGAGAAAAGTGCTGTACAAACTTACCTGATTTTCATCAGTTGTGACATGAACTCTGGAAACCAGAAGAAAAACAAGAAAGAGGATGCAACTTTGCAAGAAGATAACAGCTTTTGTTGAGAGACTATAAATGGGAAAGGAAGAGAAGGAAGGGCTCATATCATGATTGGCTTATTTGACAAAAATGAAGGCTTTATTATTTGCTCATGTGGGTTTGTGTTTTGTCTGTACTTTTTCTGATTGACATTGCCTCCCATTTCAATGCAAAGTCTGTTAAAAGACAAGTGACTCACCACCAATCATAGTCTGACACGTGTTTAGAAAATGTCTTAGAAACAGTACTTCAAGAGATTTGGATAATCTTCTCAT

mRNA sequence

CAAAAAGCTACGCTTTTGGGACAATAACTTGGACACAACAAGACTAAAGAATCTCCTCTCTTATCCACTCCTTTCACTCAGAGTATTGAAACAGCAGAAGAAATCTCTATAATGGCTGCAAATGGTGCTGTAAATTCCACCCCATTAAGGCTCCCATCAGCCATTCCCACTGGGAAATGGAATTCAAATCCCAGAATTTGCCTTCTAACAAAACCCCCAATTCCTACTCTCTCCTTGTACCAATTTCAGTCTACTTTCACTCTCAACAGGAACTTCAGATTTTGTTCGAATCTCTCTCTCAAAGCTTCTTCTTCCCTTGCTTCAGGATATGTGGAGGAACCTTCAACCAATGTAAAATTTCCGACGTCCTTGACTCTGCCGGGCTGCTCAACCTCGCTGTCACTGCTCGGAACAGGTTACAGAGAGAAAGTTTTTGCTATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAATGAATTAAACGCTTGGAGTGGACGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTCTCCTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGTAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACAACGGTTGATGAATCTGCATTATCTACCTTTCGTAACATCTTCGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTAGAATCGATGAATTGCAGGTTAGCATCTCAACAGATGGCCCACCAACAGGAATAGAAGCTACAATTGAATCAAATAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACTCCCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAGGACCAAATTTTTCTTGTACTTTTATTAGTTTGAATGAACATTTGGATATGGTTCCACCAAACAAGTTACAAATGAGAGATCGCTACAAGTGTAATACATGTTAGAGAAGGGACCGACTCAAGAATCTGTTACAATGCTATTTGACCTTATCTGCTCAAGAACTTTGACAACCTCTACCATTGTCGGTCGCTGAGCTGGTTCCGGTTCAAGACACTTCAATGCAATGCTAAATACGCCATTAACCTCGTCAACCGGACAACAGCCCAAACTACTGTCAAGTACATATTCTTCCCTTTTCTCCTCAACAACTGTTTTCACCTGTCATTTACATGACACCATGAAAGTTAGATAAGGAATAGCTTGTTGTTCAACTAATATTCTTTTTGTGAATGATGTTTCCAATTTATAGCACTTGAGTATTCAATCCAGTGCCTCATGAAAGATGTCACTGCAACATCTGGGTAGTTGGTGAAATGAATGGCTCACTAGGAAACGGTTTACTCGAACGCATCAATTAAAAACTATCCATTTGTAGAATCAATATGAGTAATCAACCAACCTAAAGGCTGTATGACTTTCTTAGGCTACTGAAGATGGTCCATGATTCACTTACCCATGTCACAAGTTTAGTTCCCTCTTCCATAAATGCCTCATCAGTCGGTTTTTTCCCTGTTAAGAGCTCGAGAAGAACTACACCAAAGCTGTAGACATCTCCTTTCACCGTTGCTCGTCCGGTATCGAAGTATTCTGCCAAAATGAAGTTAGTATTATCCATGTCAAGGGAGCGGTAAAGTAGAATGGCTTGTTAAATTCTACCTGGAGCCAAGTACCCAAATGTGCCTGCCACAATTGTTGATACATGAGTCTTGTCAGGTTCCATCAGTGTCGCCAATCCAAAGTCGGACACTTGGGCGTCCATGTTTTGATCCAACAATATGTTGCTCGACTTGATATCTCTATGTATGATGTGTGGGATGCAGTCGTGATGAAGGTACGATATGCCTCTCGCTGCACCTACTGCTATTTTATACCGTGATGGCCAATCCAAAACCTTTTCATTTGATCTTCCTGCAGTATCATCAAATTTAGGACAGAATAATGTGCTATATCATCACTGAGAAGCTTTAAGAAAACTGAAGGCTTTGATATATATACATACCATGTAGATATGCATACAAACTTCCATTAGGCATCAGCTCATATATAAGGAGATTATAGTGAGGAGCTGTGTAGTATCCGTGAAGCGTCACGATATTCCGATGCTTTATATCTCCCATCGCTTCCAACTCTCTCTCGAATCCTTGATCTCTTTCCGCACTTCCTCTGTTCAGTCTTTTCACAGCAAATGTCATGGAATCACTTAGTGCAAGTTTGTAAACAATCCCATGGCCTCCAGAGCCAATGATGTCCTTATTGTTAAGTTTTAATGTTTTCTTCAGGAATGCATCTGATTTTAAGGACTTTGTTGCTGGAGACTTGAACATTACCATCTTCCCACCTAAGCATATACATTCGAATTGAACTCGTTACTCTCTGCACCGTGTTTAATTTAACAAACTCTACACATTCTCCCAAAAGAAAGTTTCTGCTTTTCAAGTTTGGAAATGATCATACCTGATATCCCATCTTCATAAATCATGTGTCTTCTTTTCCAGCGCTTGTAAAGAAGCAATGTTATGAATATCTTCGATACGACGAAAGCAACACAACTGATTGTGATGTAGAATGCTATAGCCTGGCCTCTATCCATTTGATTCTCCAGACCATGAAAATGTTCAGAACAGGTTTAAATGGAAGACAGCCTCAAACTTGTGACATTTCCTCCATTTAACTCTCCATGAAGGCAGCAAGTTGACGGTCTTTCGACATGTTTCTTGAGTTTCAGTGAGCTGAAGTAGCTGAAGGCTATTCTCTGGTACAACTGTAGATGCAGAAACAACACAATAACACCAATATAGAGATGAAACTAACAACCCCAAGATCCAAGATCTTCGCGGTTGCGCCGAATACATTTCTTCATGAATTTTCTTGACAAAAAGGAACTTCAAGAATGGAGTTGAAAACAAAGAAGCAAAAGAACATTGTTTTGGCTAGAGGATGCAAGATTTCAACAGAGAAACACAACAAAACCAAAGCCAAAAAGAGAAAAGTGCTGTACAAACTTACCTGATTTTCATCAGTTGTGACATGAACTCTGGAAACCAGAAGAAAAACAAGAAAGAGGATGCAACTTTGCAAGAAGATAACAGCTTTTGTTGAGAGACTATAAATGGGAAAGGAAGAGAAGGAAGGGCTCATATCATGATTGGCTTATTTGACAAAAATGAAGGCTTTATTATTTGCTCATGTGGGTTTGTGTTTTGTCTGTACTTTTTCTGATTGACATTGCCTCCCATTTCAATGCAAAGTCTGTTAAAAGACAAGTGACTCACCACCAATCATAGTCTGACACGTGTTTAGAAAATGTCTTAGAAACAGTACTTCAAGAGATTTGGATAATCTTCTCAT

Coding sequence (CDS)

ATGGCTGCAAATGGTGCTGTAAATTCCACCCCATTAAGGCTCCCATCAGCCATTCCCACTGGGAAATGGAATTCAAATCCCAGAATTTGCCTTCTAACAAAACCCCCAATTCCTACTCTCTCCTTGTACCAATTTCAGTCTACTTTCACTCTCAACAGGAACTTCAGATTTTGTTCGAATCTCTCTCTCAAAGCTTCTTCTTCCCTTGCTTCAGGATATGTGGAGGAACCTTCAACCAATGTAAAATTTCCGACGTCCTTGACTCTGCCGGGCTGCTCAACCTCGCTGTCACTGCTCGGAACAGGTTACAGAGAGAAAGTTTTTGCTATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAATGAATTAAACGCTTGGAGTGGACGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTCTCCTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGTAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACAACGGTTGATGAATCTGCATTATCTACCTTTCGTAACATCTTCGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTAGAATCGATGAATTGCAGGTTAGCATCTCAACAGATGGCCCACCAACAGGAATAGAAGCTACAATTGAATCAAATAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACTCCCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAG

Protein sequence

MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNFRFCSNLSLKASSSLASGYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK

Homology

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BLAST of Lsi04G019660 vs. Swiss-Prot
Match: FAP3_ARATH (Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.1e-73
Identity = 150/234 (64.10%), Postives = 180/234 (76.92%), Query Frame = 1


Query: 52  NRNFRFCSNLSLKASSSL---ASGYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVF 111
           NR+    S + +K+++S    A  Y EE +T+VKF  S+TLPGCS+ LSLLGTG+REK F
Sbjct: 59  NRHCGEISRVIVKSAASSVGNAEDYAEETATSVKFKRSVTLPGCSSPLSLLGTGFREKKF 118

Query: 112 AIIGVKVYAAGLYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDV 171
           AIIGVKVYAAG Y+N SI + L+AW+GRSA  IQ DSSLF  IFQ+ +EKSLQIVLVRDV
Sbjct: 119 AIIGVKVYAAGYYVNESILSGLSAWTGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDV 178

Query: 172 DGKTFWDALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRID 231
           DGKTFWDALD+AISPRIK+P++ D +ALSTFR IF+ R L KG+ I LTW+    ML   
Sbjct: 179 DGKTFWDALDEAISPRIKSPSSEDTTALSTFRGIFQNRPLNKGSVILLTWINTSNML--- 238

Query: 232 ELQVSISTDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVL 283
              VS+S+ G PT ++ATIES NVTSALFDVFFGDSPVSPTLK+SVA  LA  L
Sbjct: 239 ---VSVSSGGLPTNVDATIESGNVTSALFDVFFGDSPVSPTLKSSVANQLAMTL 286

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BLAST of Lsi04G019660 vs. Swiss-Prot
Match: CF1B1_SOYBN (Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-12
Identity = 56/201 (27.86%), Postives = 95/201 (47.26%), Query Frame = 1


Query: 81  VKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYINSSISNELNA-WSGRSAA 140
           ++FP  +T PG + S  L G G R        VK    G+Y+     + L A W G+SAA
Sbjct: 15  LQFPALVTPPGSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAA 74

Query: 141 AIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTTV---DESAL 200
            + +    +  I + P EK ++   +R +DG+ +   + +     +++  T    +E A+
Sbjct: 75  ELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAI 134

Query: 201 STFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGP-PTGIEATIESNNVTSA 260
             FRN F+ ++   G+ +F       K      L +S S D   P    A I++  ++ A
Sbjct: 135 EEFRNAFKDQNFPPGSTVFY------KQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEA 194

Query: 261 LFDVFFGDSPVSPTLKASVAT 277
           + +   G+ PVSP LK S+AT
Sbjct: 195 VLETMIGEIPVSPALKESLAT 209

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BLAST of Lsi04G019660 vs. Swiss-Prot
Match: CF1B2_SOYBN (Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.2e-12
Identity = 55/201 (27.36%), Postives = 94/201 (46.77%), Query Frame = 1


Query: 81  VKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYINSSISNELNA-WSGRSAA 140
           ++FP  +T P  + S  L G G R        VK    G+Y+     + L A W G+SAA
Sbjct: 15  LQFPALVTPPASTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLGAKWKGKSAA 74

Query: 141 AIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTT---VDESAL 200
            + +    +  I + P EK ++   +R +DG+ +   + +     +++  T    +E A+
Sbjct: 75  ELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMESVGTYSEAEEKAI 134

Query: 201 STFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGP-PTGIEATIESNNVTSA 260
             FRN F+ ++   G+ +F       K      L +S S D   P    A I++  ++ A
Sbjct: 135 EEFRNAFKDQNFPPGSTVFY------KQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEA 194

Query: 261 LFDVFFGDSPVSPTLKASVAT 277
           + +   G+ PVSP LK S+AT
Sbjct: 195 VLETMIGEIPVSPALKESLAT 209

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BLAST of Lsi04G019660 vs. Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-11
Identity = 60/207 (28.99%), Postives = 92/207 (44.44%), Query Frame = 1


Query: 81  VKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYINSSISNELNA-WSGRSAA 140
           V FP +   PG S+SL L G G R        V   A G+Y+     + L   W G++A 
Sbjct: 16  VTFPPAAAPPGSSSSLFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTAD 75

Query: 141 AIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTTVDE---SAL 200
            +  +S  F  IF  P EK  +I +V+ + G+ + + +++      KA  T  E   +A+
Sbjct: 76  DLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAV 135

Query: 201 STFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGPPTGIEATIESNNVTSAL 260
             F+   +  +   GT I  T    P  L I   +       P TG    IES  ++ A+
Sbjct: 136 EKFKEACKNETFPPGTSILFTHQVSPASLTITFWR---EGSMPETG-NTVIESKALSEAI 195

Query: 261 FDVFFGDSPVSPTLKASVATGLAAVLK 284
            +   G   VSP  K SVA  L+ +L+
Sbjct: 196 LESIIGKHGVSPGAKRSVAQRLSEILE 218

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BLAST of Lsi04G019660 vs. Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-11
Identity = 61/221 (27.60%), Postives = 94/221 (42.53%), Query Frame = 1


Query: 67  SSLASGYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYINSSI 126
           SS  S   E    +  FP S+  P  + S  L G G R        VK  A G+Y+  S 
Sbjct: 3   SSSVSSVTEVKVESYVFPPSVKPPSSTKSFLLGGAGVRGLEINGNFVKFTAIGVYLEESG 62

Query: 127 SNELNA-WSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDDAISPRI 186
              L+  W G++A  + +    F  I   P EK  Q+ L+  V G+ +   + +  + + 
Sbjct: 63  VAVLSGKWKGKTAEELSDSVEFFTDIITGPFEKFTQVTLILPVTGQQYSPKVAENCAAQW 122

Query: 187 KAP---TTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGP-PT 246
           KA    T  D  A+  F  +F+  S   G  I  T          + L +S   +G  P 
Sbjct: 123 KAAGIYTDADGIAIEKFLQVFQTESFTPGDSILFTHSP-------ESLTISFGKNGAIPE 182

Query: 247 GIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVL 283
              A IE+  ++ A+ +   G+  VSP  K S+AT +A +L
Sbjct: 183 VSNAVIENKKLSEAVIESIIGEKGVSPAAKKSLATRIAEIL 216

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BLAST of Lsi04G019660 vs. TrEMBL
Match: A0A0A0L368_CUCSA (Chalcone-flavonone isomerase family protein OS=Cucumis sativus GN=Csa_4G622760 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.5e-122
Identity = 246/288 (85.42%), Postives = 258/288 (89.58%), Query Frame = 1


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTL-NRNFRFCS 60
           MAAN AVNSTPL LP +IPTGK NS+P ICLLTKP IPTLS++   STF+L N NFRF S
Sbjct: 1   MAAN-AVNSTPLSLPLSIPTGKLNSSPTICLLTKPSIPTLSIH---STFSLSNNNFRFYS 60

Query: 61  NLSLKASSSLAS----GYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120
           N SL+ SSSLAS    G+VEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV
Sbjct: 61  NFSLRPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120

Query: 121 YAAGLYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWD 180
           YAAGLYINSS+SNELNAW GRSAAAIQEDSSLF+IIFQS SEKSLQIVLVRDVDGKTFWD
Sbjct: 121 YAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSLQIVLVRDVDGKTFWD 180

Query: 181 ALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSIS 240
           ALDDAISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKML      VSIS
Sbjct: 181 ALDDAISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKML------VSIS 240

Query: 241 TDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
            DG PTGI+ATIESNNVTS+LFDVFFGDSPVSPTLKASVATGLAAVLK
Sbjct: 241 IDGSPTGIDATIESNNVTSSLFDVFFGDSPVSPTLKASVATGLAAVLK 278

[Close]

BLAST of Lsi04G019660 vs. TrEMBL
Match: E0CRY9_VITVI (Chalcone-flavonone isomerase family protein OS=Vitis vinifera GN=VIT_19s0014g00100 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.1e-88
Identity = 189/280 (67.50%), Postives = 217/280 (77.50%), Query Frame = 1


Query: 11  PLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQ-FQSTFTLNRNFRFCSNLSLKASSSL 70
           P+ LPS+ PT  +        +T+  I T SL   F   F+L R  RF +++S  ASSS 
Sbjct: 10  PIWLPSSKPTICFPGKLPNSGVTRYKIHTCSLLSTFAHHFSLQRKDRFQTHVSPNASSSS 69

Query: 71  ASG------YVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYIN 130
           +S       Y+EEPSTNVKF TSLTLP CS+ LSLLGTGYREKVFAIIGVKVYAAGLY+N
Sbjct: 70  SSASVGSAEYIEEPSTNVKFQTSLTLPECSSPLSLLGTGYREKVFAIIGVKVYAAGLYLN 129

Query: 131 SSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDDAISP 190
            SISN+LNAW GRSA  IQ DSSLF+ IFQ P EKSLQIVLVRDVDGKTFWDALD+AISP
Sbjct: 130 QSISNKLNAWKGRSATEIQGDSSLFDSIFQIPQEKSLQIVLVRDVDGKTFWDALDEAISP 189

Query: 191 RIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGPPTGI 250
           RIKAP+ VD SALSTFR+IF+GRSL+KGTFIFLTW+EP KML      V IS+DG P+ +
Sbjct: 190 RIKAPSPVDVSALSTFRSIFQGRSLRKGTFIFLTWMEPSKML------VCISSDGLPSSV 249

Query: 251 EATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
           +ATI+S NVT ALFDVFFG+SPVSP+LKASVA GLA VLK
Sbjct: 250 DATIKSMNVTMALFDVFFGNSPVSPSLKASVANGLATVLK 283

[Close]

BLAST of Lsi04G019660 vs. TrEMBL
Match: A0A067EAL6_CITSI (Chalcone-flavonone isomerase family protein OS=Citrus sinensis GN=CISIN_1g023649mg PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.7e-84
Identity = 181/284 (63.73%), Postives = 213/284 (75.00%), Query Frame = 1


Query: 6   AVNSTPLRLPS-AIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNR--NFRFCSNLS 65
           A  STP+   S  IP   W +N     L K   P    ++ +    L+     R   + +
Sbjct: 2   AAISTPICFSSLVIPCKTWKTNSSHLFLGKFAEPHAKSFRNKPCSLLSAFSATRIQPHFT 61

Query: 66  LKASSSLASG---YVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG 125
           +KASSS + G   Y EEP+T VKF  SL+LPG S+ LSLLGTGYREKVFAIIGVKVYAAG
Sbjct: 62  VKASSSSSVGSAEYTEEPATKVKFQKSLSLPGYSSPLSLLGTGYREKVFAIIGVKVYAAG 121

Query: 126 LYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDD 185
           LYIN SI ++LNAW G+ AA IQEDSSLF+ I+Q+PSEKSL+IVLVRDVDGKTFWDALDD
Sbjct: 122 LYINQSILSKLNAWKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGKTFWDALDD 181

Query: 186 AISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGP 245
           AISPRI+ PT VDESALSTFR+IF+GR+L KGTFIFLTWL+P KML      VSIS DG 
Sbjct: 182 AISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKML------VSISGDGL 241

Query: 246 PTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
           P+G++ATIES NVT AL+DVFFG +PVSP+LKASVATGLA +LK
Sbjct: 242 PSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATILK 279

[Close]

BLAST of Lsi04G019660 vs. TrEMBL
Match: V4VR96_9ROSI (Chalcone-flavonone isomerase family protein OS=Citrus clementina GN=CICLE_v10021578mg PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.0e-83
Identity = 181/284 (63.73%), Postives = 212/284 (74.65%), Query Frame = 1


Query: 6   AVNSTPLRLPS-AIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNR--NFRFCSNLS 65
           A  STP+   S  IP   W +N     L K   P  + ++      L+     R   + +
Sbjct: 2   AAISTPICFSSLVIPCKTWKTNSSHLFLGKFAEPHANSFRNNPCSLLSAFSATRIQPHFT 61

Query: 66  LKASSSLASG---YVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG 125
           +KASSS + G   Y EEP T VKF  SL+LPG S+ LSLLGTGYREKVFAIIGVKVYAAG
Sbjct: 62  VKASSSSSVGSAEYTEEPVTKVKFQKSLSLPGYSSPLSLLGTGYREKVFAIIGVKVYAAG 121

Query: 126 LYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDD 185
           LYIN SI ++LNAW G+ AA IQEDSSLF+ I+Q+PSEKSL+IVLVRDVDGKTFWDALDD
Sbjct: 122 LYINQSILSKLNAWKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGKTFWDALDD 181

Query: 186 AISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGP 245
           AISPRI+ PT VDESALSTFR+IF+GR+L KGTFIFLTWL+P KML      VSIS DG 
Sbjct: 182 AISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKML------VSISGDGL 241

Query: 246 PTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
           P+G++ATIES NVT AL+DVFFG +PVSP+LKASVATGLA +LK
Sbjct: 242 PSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATILK 279

[Close]

BLAST of Lsi04G019660 vs. TrEMBL
Match: A0A059BNM4_EUCGR (Chalcone-flavonone isomerase family protein OS=Eucalyptus grandis GN=EUGRSUZ_F01378 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.8e-83
Identity = 177/284 (62.32%), Postives = 214/284 (75.35%), Query Frame = 1


Query: 9   STPLRLPSAIPTGKWNS-NP-RICLLTKPPIPTLSLYQFQS------TFTLNRNFR-FCS 68
           S+P  +  ++P+  WN  NP  I L  +  +PT +  Q  +      + +L R +  F +
Sbjct: 8   SSPTCVSPSLPSSSWNHLNPCNIFLGRRNSVPTPNQNQSPTKRHQSLSLSLRRQYTSFTA 67

Query: 69  NLSLKASSSLASGYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG 128
             +  +SSS +  Y EEP+T VKF T LTLPGCSTSL+L+GTGYREKVFAIIGVKVYAAG
Sbjct: 68  KAAAASSSSGSESYAEEPATRVKFQTPLTLPGCSTSLTLVGTGYREKVFAIIGVKVYAAG 127

Query: 129 LYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDD 188
           LYIN SI ++L+AW G+SAA IQE+ SLFN IFQ+P EKSLQIVLVRDVDGKTFWDALDD
Sbjct: 128 LYINPSIFSKLDAWKGKSAADIQENRSLFNSIFQAPLEKSLQIVLVRDVDGKTFWDALDD 187

Query: 189 AISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGP 248
           AISPRIK+ T VD+SALSTFR+IF+GR LKKGT IFLTWL+  KML      VS+S+DG 
Sbjct: 188 AISPRIKSLTPVDQSALSTFRSIFQGRPLKKGTSIFLTWLDSSKML------VSVSSDGL 247

Query: 249 PTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
           P+G +ATIES NVT ALFDVF GD+ VSP+LKASVA GLA +LK
Sbjct: 248 PSGTDATIESQNVTFALFDVFLGDASVSPSLKASVANGLATILK 285

[Close]

BLAST of Lsi04G019660 vs. TAIR10
Match: AT1G53520.1 (AT1G53520.1 Chalcone-flavanone isomerase family protein)

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-74
Identity = 150/234 (64.10%), Postives = 180/234 (76.92%), Query Frame = 1


Query: 52  NRNFRFCSNLSLKASSSL---ASGYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVF 111
           NR+    S + +K+++S    A  Y EE +T+VKF  S+TLPGCS+ LSLLGTG+REK F
Sbjct: 59  NRHCGEISRVIVKSAASSVGNAEDYAEETATSVKFKRSVTLPGCSSPLSLLGTGFREKKF 118

Query: 112 AIIGVKVYAAGLYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDV 171
           AIIGVKVYAAG Y+N SI + L+AW+GRSA  IQ DSSLF  IFQ+ +EKSLQIVLVRDV
Sbjct: 119 AIIGVKVYAAGYYVNESILSGLSAWTGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDV 178

Query: 172 DGKTFWDALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRID 231
           DGKTFWDALD+AISPRIK+P++ D +ALSTFR IF+ R L KG+ I LTW+    ML   
Sbjct: 179 DGKTFWDALDEAISPRIKSPSSEDTTALSTFRGIFQNRPLNKGSVILLTWINTSNML--- 238

Query: 232 ELQVSISTDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVL 283
              VS+S+ G PT ++ATIES NVTSALFDVFFGDSPVSPTLK+SVA  LA  L
Sbjct: 239 ---VSVSSGGLPTNVDATIESGNVTSALFDVFFGDSPVSPTLKSSVANQLAMTL 286

[Close]

BLAST of Lsi04G019660 vs. NCBI nr
Match: gi|778695591|ref|XP_011654021.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 3.9e-124
Identity = 246/284 (86.62%), Postives = 258/284 (90.85%), Query Frame = 1


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTL-NRNFRFCS 60
           MAAN AVNSTPL LP +IPTGK NS+P ICLLTKP IPTLS++   STF+L N NFRF S
Sbjct: 1   MAAN-AVNSTPLSLPLSIPTGKLNSSPTICLLTKPSIPTLSIH---STFSLSNNNFRFYS 60

Query: 61  NLSLKASSSLASGYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG 120
           N SL+ SSSLASG+VEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG
Sbjct: 61  NFSLRPSSSLASGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG 120

Query: 121 LYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDD 180
           LYINSS+SNELNAW GRSAAAIQEDSSLF+IIFQS SEKSLQIVLVRDVDGKTFWDALDD
Sbjct: 121 LYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSLQIVLVRDVDGKTFWDALDD 180

Query: 181 AISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGP 240
           AISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKML      VSIS DG 
Sbjct: 181 AISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKML------VSISIDGS 240

Query: 241 PTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
           PTGI+ATIESNNVTS+LFDVFFGDSPVSPTLKASVATGLAAVLK
Sbjct: 241 PTGIDATIESNNVTSSLFDVFFGDSPVSPTLKASVATGLAAVLK 274

[Close]

BLAST of Lsi04G019660 vs. NCBI nr
Match: gi|659103021|ref|XP_008452433.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-123
Identity = 245/284 (86.27%), Postives = 256/284 (90.14%), Query Frame = 1


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNF-RFCS 60
           MAAN  VN TPL LP ++PTGK NSNP ICLLTKP IPTLS++   STF+LN NF RF S
Sbjct: 39  MAAN-VVNPTPLSLPLSVPTGKLNSNPTICLLTKPSIPTLSIH---STFSLNNNFFRFSS 98

Query: 61  NLSLKASSSLASGYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG 120
           N SLK SSSLASG+VEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG
Sbjct: 99  NFSLKPSSSLASGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAG 158

Query: 121 LYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDD 180
           LYINSS+SNELNAW GRSAAAIQEDSSLF+IIFQS SEKSLQIVLVRDVDGKTFWDALDD
Sbjct: 159 LYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSCSEKSLQIVLVRDVDGKTFWDALDD 218

Query: 181 AISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGP 240
           AISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKML      VSIS +GP
Sbjct: 219 AISPRIKAPTPGDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKML------VSISINGP 278

Query: 241 PTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
           PTGI+ATIESNNVTSALFDVFFGDSPVS TLKASVATGLAAVLK
Sbjct: 279 PTGIDATIESNNVTSALFDVFFGDSPVSSTLKASVATGLAAVLK 312

[Close]

BLAST of Lsi04G019660 vs. NCBI nr
Match: gi|449456545|ref|XP_004146009.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 2.1e-122
Identity = 246/288 (85.42%), Postives = 258/288 (89.58%), Query Frame = 1


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTL-NRNFRFCS 60
           MAAN AVNSTPL LP +IPTGK NS+P ICLLTKP IPTLS++   STF+L N NFRF S
Sbjct: 1   MAAN-AVNSTPLSLPLSIPTGKLNSSPTICLLTKPSIPTLSIH---STFSLSNNNFRFYS 60

Query: 61  NLSLKASSSLAS----GYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120
           N SL+ SSSLAS    G+VEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV
Sbjct: 61  NFSLRPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120

Query: 121 YAAGLYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWD 180
           YAAGLYINSS+SNELNAW GRSAAAIQEDSSLF+IIFQS SEKSLQIVLVRDVDGKTFWD
Sbjct: 121 YAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSLQIVLVRDVDGKTFWD 180

Query: 181 ALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSIS 240
           ALDDAISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKML      VSIS
Sbjct: 181 ALDDAISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKML------VSIS 240

Query: 241 TDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
            DG PTGI+ATIESNNVTS+LFDVFFGDSPVSPTLKASVATGLAAVLK
Sbjct: 241 IDGSPTGIDATIESNNVTSSLFDVFFGDSPVSPTLKASVATGLAAVLK 278

[Close]

BLAST of Lsi04G019660 vs. NCBI nr
Match: gi|659103018|ref|XP_008452432.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 445.7 bits (1145), Expect = 6.2e-122
Identity = 245/288 (85.07%), Postives = 256/288 (88.89%), Query Frame = 1


Query: 1   MAANGAVNSTPLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQFQSTFTLNRNF-RFCS 60
           MAAN  VN TPL LP ++PTGK NSNP ICLLTKP IPTLS++   STF+LN NF RF S
Sbjct: 39  MAAN-VVNPTPLSLPLSVPTGKLNSNPTICLLTKPSIPTLSIH---STFSLNNNFFRFSS 98

Query: 61  NLSLKASSSLAS----GYVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 120
           N SLK SSSLAS    G+VEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV
Sbjct: 99  NFSLKPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKV 158

Query: 121 YAAGLYINSSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWD 180
           YAAGLYINSS+SNELNAW GRSAAAIQEDSSLF+IIFQS SEKSLQIVLVRDVDGKTFWD
Sbjct: 159 YAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSCSEKSLQIVLVRDVDGKTFWD 218

Query: 181 ALDDAISPRIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSIS 240
           ALDDAISPRIKAPT  DESALSTFR+IFEGRSLKKGTFIFLTWLEPPKML      VSIS
Sbjct: 219 ALDDAISPRIKAPTPGDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKML------VSIS 278

Query: 241 TDGPPTGIEATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
            +GPPTGI+ATIESNNVTSALFDVFFGDSPVS TLKASVATGLAAVLK
Sbjct: 279 INGPPTGIDATIESNNVTSALFDVFFGDSPVSSTLKASVATGLAAVLK 316

[Close]

BLAST of Lsi04G019660 vs. NCBI nr
Match: gi|359493644|ref|XP_002283758.2| (PREDICTED: fatty-acid-binding protein 3 [Vitis vinifera])

HSP 1 Score: 334.7 bits (857), Expect = 1.5e-88
Identity = 189/280 (67.50%), Postives = 217/280 (77.50%), Query Frame = 1


Query: 11  PLRLPSAIPTGKWNSNPRICLLTKPPIPTLSLYQ-FQSTFTLNRNFRFCSNLSLKASSSL 70
           P+ LPS+ PT  +        +T+  I T SL   F   F+L R  RF +++S  ASSS 
Sbjct: 10  PIWLPSSKPTICFPGKLPNSGVTRYKIHTCSLLSTFAHHFSLQRKDRFQTHVSPNASSSS 69

Query: 71  ASG------YVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYIN 130
           +S       Y+EEPSTNVKF TSLTLP CS+ LSLLGTGYREKVFAIIGVKVYAAGLY+N
Sbjct: 70  SSASVGSAEYIEEPSTNVKFQTSLTLPECSSPLSLLGTGYREKVFAIIGVKVYAAGLYLN 129

Query: 131 SSISNELNAWSGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWDALDDAISP 190
            SISN+LNAW GRSA  IQ DSSLF+ IFQ P EKSLQIVLVRDVDGKTFWDALD+AISP
Sbjct: 130 QSISNKLNAWKGRSATEIQGDSSLFDSIFQIPQEKSLQIVLVRDVDGKTFWDALDEAISP 189

Query: 191 RIKAPTTVDESALSTFRNIFEGRSLKKGTFIFLTWLEPPKMLRIDELQVSISTDGPPTGI 250
           RIKAP+ VD SALSTFR+IF+GRSL+KGTFIFLTW+EP KML      V IS+DG P+ +
Sbjct: 190 RIKAPSPVDVSALSTFRSIFQGRSLRKGTFIFLTWMEPSKML------VCISSDGLPSSV 249

Query: 251 EATIESNNVTSALFDVFFGDSPVSPTLKASVATGLAAVLK 284
           +ATI+S NVT ALFDVFFG+SPVSP+LKASVA GLA VLK
Sbjct: 250 DATIKSMNVTMALFDVFFGNSPVSPSLKASVANGLATVLK 283

The following BLAST results are available for this feature:

BLAST of Lsi04G019660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAP3_ARATH	4.1e-73	64.10	Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=FAP3 PE=1...	[more]
CF1B1_SOYBN	2.4e-12	27.86	Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1	[more]
CF1B2_SOYBN	5.2e-12	27.36	Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2 SV=1	[more]
CFI_CANGE	2.0e-11	28.99	Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1	[more]
CFI_GENTR	2.6e-11	27.60	Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1	[more]

BLAST of Lsi04G019660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L368_CUCSA	1.5e-122	85.42	Chalcone-flavonone isomerase family protein OS=Cucumis sativus GN=Csa_4G622760 P...	[more]
E0CRY9_VITVI	1.1e-88	67.50	Chalcone-flavonone isomerase family protein OS=Vitis vinifera GN=VIT_19s0014g001...	[more]
A0A067EAL6_CITSI	4.7e-84	63.73	Chalcone-flavonone isomerase family protein OS=Citrus sinensis GN=CISIN_1g023649...	[more]
V4VR96_9ROSI	1.0e-83	63.73	Chalcone-flavonone isomerase family protein OS=Citrus clementina GN=CICLE_v10021...	[more]
A0A059BNM4_EUCGR	8.8e-83	62.32	Chalcone-flavonone isomerase family protein OS=Eucalyptus grandis GN=EUGRSUZ_F01...	[more]

BLAST of Lsi04G019660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53520.1	2.3e-74	64.10	Chalcone-flavanone isomerase family protein	[more]

BLAST of Lsi04G019660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778695591\|ref\|XP_011654021.1\|	3.9e-124	86.62	PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis sativus]	[more]
gi\|659103021\|ref\|XP_008452433.1\|	1.1e-123	86.27	PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis melo]	[more]
gi\|449456545\|ref\|XP_004146009.1\|	2.1e-122	85.42	PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis sativus]	[more]
gi\|659103018\|ref\|XP_008452432.1\|	6.2e-122	85.07	PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis melo]	[more]
gi\|359493644\|ref\|XP_002283758.2\|	1.5e-88	67.50	PREDICTED: fatty-acid-binding protein 3 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0045430	chalcone isomerase activity
GO:0016872	intramolecular lyase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009813	flavonoid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR016088	Chalcone_isomerase_3-sand
IPR016087	Chalcone_isomerase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006631	fatty acid metabolic process
biological_process	GO:0009813	flavonoid biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0045430	chalcone isomerase activity
molecular_function	GO:0005504	fatty acid binding
molecular_function	GO:0016872	intramolecular lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G019660.1	Lsi04G019660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016087	Chalcone isomerase	PFAM	PF02431	Chalcone	coord: 80..279 score: 7.8
IPR016087	Chalcone isomerase	unknown	SSF54626	Chalcone isomerase	coord: 73..283 score: 1.11
IPR016088	Chalcone isomerase, 3-layer sandwich	GENE3D	G3DSA:3.50.70.10		coord: 80..258 score: 1.1
None	No IPR available	PANTHER	PTHR28039	FAMILY NOT NAMED	coord: 73..282 score: 5.4
None	No IPR available	PANTHER	PTHR28039:SF6	ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 18, MITOCHONDRIAL-RELATED	coord: 73..282 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G019660	Csa4G622760	Cucumber (Chinese Long) v2	culsiB283
Lsi04G019660	CSPI04G22370	Wild cucumber (PI 183967)	cpilsiB283
Lsi04G019660	Cucsa.058090	Cucumber (Gy14) v1	cgylsiB047
Lsi04G019660	CmaCh09G006840	Cucurbita maxima (Rimu)	cmalsiB025
Lsi04G019660	CmoCh09G006670	Cucurbita moschata (Rifu)	cmolsiB013
Lsi04G019660	Cla023295	Watermelon (97103) v1	lsiwmB333
Lsi04G019660	MELO3C016680	Melon (DHL92) v3.5.1	lsimeB321
Lsi04G019660	ClCG11G017050	Watermelon (Charleston Gray)	lsiwcgB259
Lsi04G019660	MELO3C016680.2	Melon (DHL92) v3.6.1	lsimedB335
Lsi04G019660	Cla97C11G223090	Watermelon (97103) v2	lsiwmbB266
Lsi04G019660	Bhi09G002922	Wax gourd	lsiwgoB402
Lsi04G019660	Cp4.1LG06g05380	Cucurbita pepo (Zucchini)	cpelsiB639
Lsi04G019660	CsGy4G020870	Cucumber (Gy14) v2	cgyblsiB263
Lsi04G019660	Carg03088	Silver-seed gourd	carlsiB577
Lsi04G019660	CsaV3_4G032710	Cucumber (Chinese Long) v3	cuclsiB304

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G019660	Cucurbita maxima (Rimu)	cmalsiB432
Lsi04G019660	Cucurbita moschata (Rifu)	cmolsiB421
Lsi04G019660	Cucurbita pepo (Zucchini)	cpelsiB456
Lsi04G019660	Wild cucumber (PI 183967)	cpilsiB290
Lsi04G019660	Cucumber (Chinese Long) v2	culsiB290
Lsi04G019660	Melon (DHL92) v3.6.1	lsimedB331
Lsi04G019660	Silver-seed gourd	carlsiB286