CmoCh09G006670 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G006670
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Chalcone-flavonone isomerase family protein
Location	Cmo_Chr09 : 3336382 .. 3338100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGTGGGCATCCGAACTACATGAATCTCCTCTCTTATCCAATCCCACTCAGAGCTTCCAAAGAGCTGAAGAAGAAATCTCTACAATGGCTGTAAATGCCACTCCATTACGCCTCCCACCAGCCATTCCCACTGGGAAATGGAGTTCCAATGCTAGAGTTTGCCTCCCCAGAAAACCCCCAACTCAATCTACTTCCTCTTTCAACAAGAGCTTCAGATCTTGTTCCAATTTCTTAAAAGAAAAATTTCTTAAATACCATTTGTATCCCTTAAAAGAAAAATTTTGTTCCCCTCTCCAAACAATGTGGGATCTCACAATCCACCCCCCATAGAGTCCCAGCGTCCTCGCTGCACACCGCCTGATGTCTGGCTCTAATACCATTTGTAACAGCCCAAGTCCATCGCTAGCAGGTATTGTCTGCTTTGACTCATTACGTATCGTTGTCAGCCTCACAGTTCTAAAATGTTTCTGTTAGGAAAAAGTTTCTACACTCTTATAAGAAATGCTTCGTTCCCCTCTCCAACCGAGGTGAGATGAATGTGGGATCTCACAGCTTACTATGAATTTTATACATCCAAAATATTGATACTTTTAACTAAACTATATTCTTCACTCTGATCTTCATTAGCTGCAAATATTTCAGGTTTCAGAGAGAAAGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAACGAATTAAACGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTGTAATAACCATTACATATAAATTATACGTAACTATATGATTATAGAAGTTGTGGATTATTTATGTTACTACAAGTTTATTGTCTTTCAATGGCAGCTCCTTCAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGACGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTATGTTTAAACTTTTAACTGTCTTACATTGTCTTTTCTTTTCTTTTCCTTTTATTAATGGTGAATTGCAGGTTAGCATCTCAGTTGACGGCCCACCGACAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGCAGTTTTGAAATAGGACCAGGATTGTCTTGTTCTTATTAGTTTGAATGAACATTTGGATAAGGTACCACCAAACGAATTACAAATGCGAGATCACAATAAGTGTAGAATACATTTTAGAGAAGGAACCTACTCAAGAATCTGTTACAATGCTACTTGACTTTAGCTGCTCAAGCACTTTGACGACCTCTGCCATTGTCGGTCGCCGAGCAGGTTCTGGTTCAAGACACTTCAATGCTATGCTAAATACGACATTAACCTCGTCAACCGGAAAACAGCTCAAACTTCTGTCAAGTACATATTCTTCCCTTTTCTCCTGAACAACTGTTTTCACCTGACATTTAGATGACATTATGAAAGTCAGACAAGGAATAGCTTATTGTTCAGCTGTC

mRNA sequence

ATGACAGGTTTCAGAGAGAAAGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAACGAATTAAACGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTCTCCTTCAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGACGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTTAGCATCTCAGTTGACGGCCCACCGACAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGCAGTTTTGAAATAGGACCAGGATTGTCTTGTTCTTATTAGTTTGAATGAACATTTGGATAAGGTACCACCAAACGAATTACAAATGCGAGATCACAATAAGTGTAGAATACATTTTAGAGAAGGAACCTACTCAAGAATCTGTTACAATGCTACTTGACTTTAGCTGCTCAAGCACTTTGACGACCTCTGCCATTGTCGGTCGCCGAGCAGGTTCTGGTTCAAGACACTTCAATGCTATGCTAAATACGACATTAACCTCGTCAACCGGAAAACAGCTCAAACTTCTGTCAAGTACATATTCTTCCCTTTTCTCCTGAACAACTGTTTTCACCTGACATTTAGATGACATTATGAAAGTCAGACAAGGAATAGCTTATTGTTCAGCTGTC

Coding sequence (CDS)

ATGACAGGTTTCAGAGAGAAAGTTTTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCCATCTCAAACGAATTAAACGCTTGGAGGGGTCGATCGGCTGCTGCAATTCAGGAGGATTCTTCCTTGTTCAATATAATTTTTCAGTCTCCTTCAGAAAAATCTTTACAGATTGTTCTCGTCCGAGATGTCGATGGCAAAACATTCTGGGACGCCTTGGACGACGCCATTTCTCCAAGAATCAAAGCACCAACACCGGTCGATGAATCTGCATTATCTACCTTTCGTAGCATCTTCGAGGGGCGGTCTCTTAAGAAAGGAACCTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTTGTTAGCATCTCAGTTGACGGCCCACCGACAGGAATAGAAGCTACAATCGAATCAAACAATGTGACTTCAGCTCTTTTCGATGTTTTTTTCGGGGACAATCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAGCTGGATTGTCTGCAGTTTTGAAATAG

Homology

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BLAST of CmoCh09G006670 vs. Swiss-Prot
Match: FAP3_ARATH (Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.4e-63
Identity = 124/176 (70.45%), Postives = 142/176 (80.68%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TGFREK FAIIGVKVYAAG Y+N SI + L+AW GRSA  IQ DSSLF  IFQ+ +EKSL
Sbjct: 111 TGFREKKFAIIGVKVYAAGYYVNESILSGLSAWTGRSADEIQRDSSLFVSIFQAQAEKSL 170

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDVDGKTFWDALD+AISPRIK+P+  D +ALSTFR IF+ R L KG+ I LTW+ 
Sbjct: 171 QIVLVRDVDGKTFWDALDEAISPRIKSPSSEDTTALSTFRGIFQNRPLNKGSVILLTWIN 230

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVL 178
              MLVS+S  G PT ++ATIES NVTSALFDVFFGD+PVSPTLK+SVA  L+  L
Sbjct: 231 TSNMLVSVSSGGLPTNVDATIESGNVTSALFDVFFGDSPVSPTLKSSVANQLAMTL 286

[Close]

BLAST of CmoCh09G006670 vs. Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 48/170 (28.24%), Postives = 82/170 (48.24%), Query Frame = 1


Query: 14  VKVYAAGLYI-NSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGK 73
           VK  A G+Y+ + ++      W+G++A  + E    F  +   P EK +++ ++  + G 
Sbjct: 47  VKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGA 106

Query: 74  TFWDALDD---AISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSI 133
            + + + +   AI       T  +  A+  F  +F+      G+ I  T   P  + +S 
Sbjct: 107 QYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQ-SPGSLTISF 166

Query: 134 SVDG--PPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVL 178
           S DG  P  G+ A IESN ++ A+ +   G N VSP  K S+A  LSA+L
Sbjct: 167 SKDGSIPKDGV-AVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 214

[Close]

BLAST of CmoCh09G006670 vs. Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.4e-10
Identity = 46/171 (26.90%), Postives = 80/171 (46.78%), Query Frame = 1


Query: 14  VKVYAAGLYINSSISNELNA-WRGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGK 73
           VK  A G+Y+       L+  W+G++A  + E    F  I   P EK  Q+ ++  + G+
Sbjct: 45  VKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQ 104

Query: 74  TFWDALDD---AISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSI 133
            + + + +   AI  +    T  +  A+  F  +F+ ++   G  I  T      +++ I
Sbjct: 105 QYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGI 164

Query: 134 SVDG--PPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           S DG  P  G  A IE+  ++ ++ +   G   VSP  + SVA  LS +LK
Sbjct: 165 SKDGSIPEVG-NAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELLK 214

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BLAST of CmoCh09G006670 vs. Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.9e-10
Identity = 44/170 (25.88%), Postives = 79/170 (46.47%), Query Frame = 1


Query: 14  VKVYAAGLYI-NSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGK 73
           +K  A G+Y+ N ++++    W+G++A  + +    F  I   P EK  ++  +  + G+
Sbjct: 47  IKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQ 106

Query: 74  TFWDALDDAISPRIKAP---TPVDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSI 133
            + + + +      KA    T  ++ A   F  +F+      G  I  T      + +S 
Sbjct: 107 QYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLTISF 166

Query: 134 SVDGP-PTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           S DG  P    A IE+  ++ A+ +   G   VSP+ K S+AA LS +LK
Sbjct: 167 SKDGSIPEKENAIIENKQLSEAVLESIIGKKGVSPSAKQSLAARLSDLLK 216

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BLAST of CmoCh09G006670 vs. Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-09
Identity = 46/168 (27.38%), Postives = 82/168 (48.81%), Query Frame = 1


Query: 18  AAGLYINSSISNELNA-WRGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLVRDVDGKTFWD 77
           A G+Y+     + L   W+G++A  +  +S  F  IF  P EK  +I +V+ + G+ + +
Sbjct: 52  AIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSE 111

Query: 78  ALDDAISPRIKAP---TPVDESALSTFRSIFEGRSLKKGTFIFLT-WLEPPKMLVSISVD 137
            +++      KA    T  + +A+  F+   +  +   GT I  T  + P  + ++   +
Sbjct: 112 KVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWRE 171

Query: 138 G--PPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           G  P TG    IES  ++ A+ +   G + VSP  K SVA  LS +L+
Sbjct: 172 GSMPETG-NTVIESKALSEAILESIIGKHGVSPGAKRSVAQRLSEILE 218

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BLAST of CmoCh09G006670 vs. TrEMBL
Match: A0A0A0L368_CUCSA (Chalcone-flavonone isomerase family protein OS=Cucumis sativus GN=Csa_4G622760 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.8e-86
Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLYINSS+SNELNAWRGRSAAAIQEDSSLF+IIFQS SEKSL
Sbjct: 102 TGYREKVFAIIGVKVYAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSL 161

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDVDGKTFWDALDDAISPRIKAPTP DESALSTFRSIFEGRSLKKGTFIFLTWLE
Sbjct: 162 QIVLVRDVDGKTFWDALDDAISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLE 221

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           PPKMLVSIS+DG PTGI+ATIESNNVTS+LFDVFFGD+PVSPTLKASVA GL+AVLK
Sbjct: 222 PPKMLVSISIDGSPTGIDATIESNNVTSSLFDVFFGDSPVSPTLKASVATGLAAVLK 278

[Close]

BLAST of CmoCh09G006670 vs. TrEMBL
Match: A0A067EAL6_CITSI (Chalcone-flavonone isomerase family protein OS=Citrus sinensis GN=CISIN_1g023649mg PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.1e-74
Identity = 141/177 (79.66%), Postives = 161/177 (90.96%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLYIN SI ++LNAW+G+ AA IQEDSSLF+ I+Q+PSEKSL
Sbjct: 103 TGYREKVFAIIGVKVYAAGLYINQSILSKLNAWKGKGAANIQEDSSLFDTIYQAPSEKSL 162

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           +IVLVRDVDGKTFWDALDDAISPRI+ PTPVDESALSTFRSIF+GR+L KGTFIFLTWL+
Sbjct: 163 KIVLVRDVDGKTFWDALDDAISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLD 222

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           P KMLVSIS DG P+G++ATIES NVT AL+DVFFG  PVSP+LKASVA GL+ +LK
Sbjct: 223 PSKMLVSISGDGLPSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATILK 279

[Close]

BLAST of CmoCh09G006670 vs. TrEMBL
Match: V4VR96_9ROSI (Chalcone-flavonone isomerase family protein OS=Citrus clementina GN=CICLE_v10021578mg PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.1e-74
Identity = 141/177 (79.66%), Postives = 161/177 (90.96%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLYIN SI ++LNAW+G+ AA IQEDSSLF+ I+Q+PSEKSL
Sbjct: 103 TGYREKVFAIIGVKVYAAGLYINQSILSKLNAWKGKGAANIQEDSSLFDTIYQAPSEKSL 162

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           +IVLVRDVDGKTFWDALDDAISPRI+ PTPVDESALSTFRSIF+GR+L KGTFIFLTWL+
Sbjct: 163 KIVLVRDVDGKTFWDALDDAISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLD 222

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           P KMLVSIS DG P+G++ATIES NVT AL+DVFFG  PVSP+LKASVA GL+ +LK
Sbjct: 223 PSKMLVSISGDGLPSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATILK 279

[Close]

BLAST of CmoCh09G006670 vs. TrEMBL
Match: E0CRY9_VITVI (Chalcone-flavonone isomerase family protein OS=Vitis vinifera GN=VIT_19s0014g00100 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.4e-73
Identity = 142/177 (80.23%), Postives = 160/177 (90.40%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLY+N SISN+LNAW+GRSA  IQ DSSLF+ IFQ P EKSL
Sbjct: 107 TGYREKVFAIIGVKVYAAGLYLNQSISNKLNAWKGRSATEIQGDSSLFDSIFQIPQEKSL 166

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDVDGKTFWDALD+AISPRIKAP+PVD SALSTFRSIF+GRSL+KGTFIFLTW+E
Sbjct: 167 QIVLVRDVDGKTFWDALDEAISPRIKAPSPVDVSALSTFRSIFQGRSLRKGTFIFLTWME 226

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           P KMLV IS DG P+ ++ATI+S NVT ALFDVFFG++PVSP+LKASVA GL+ VLK
Sbjct: 227 PSKMLVCISSDGLPSSVDATIKSMNVTMALFDVFFGNSPVSPSLKASVANGLATVLK 283

[Close]

BLAST of CmoCh09G006670 vs. TrEMBL
Match: M5WV36_PRUPE (Chalcone-flavonone isomerase family protein OS=Prunus persica GN=PRUPE_ppa011189mg PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 8.9e-73
Identity = 140/177 (79.10%), Postives = 156/177 (88.14%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLY+N SI N LNAW+GRSAA IQEDSSLF+ IFQSP EKSL
Sbjct: 44  TGYREKVFAIIGVKVYAAGLYVNQSILNSLNAWKGRSAAEIQEDSSLFSTIFQSPLEKSL 103

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDV+GKTFWDAL+DAISPRIK+PTPVDESALSTFRSIF+G+ LKKGTFIFLTW +
Sbjct: 104 QIVLVRDVEGKTFWDALNDAISPRIKSPTPVDESALSTFRSIFQGQPLKKGTFIFLTWPD 163

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           P KMLV IS DG P+ ++A IES NV  ALFDVFFGD PVSP+LK+SV  GL +VLK
Sbjct: 164 PSKMLVCISADGLPSSVDAAIESENVALALFDVFFGDTPVSPSLKSSVVNGLESVLK 220

[Close]

BLAST of CmoCh09G006670 vs. TAIR10
Match: AT1G53520.1 (AT1G53520.1 Chalcone-flavanone isomerase family protein)

HSP 1 Score: 241.9 bits (616), Expect = 3.0e-64
Identity = 124/176 (70.45%), Postives = 142/176 (80.68%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TGFREK FAIIGVKVYAAG Y+N SI + L+AW GRSA  IQ DSSLF  IFQ+ +EKSL
Sbjct: 111 TGFREKKFAIIGVKVYAAGYYVNESILSGLSAWTGRSADEIQRDSSLFVSIFQAQAEKSL 170

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDVDGKTFWDALD+AISPRIK+P+  D +ALSTFR IF+ R L KG+ I LTW+ 
Sbjct: 171 QIVLVRDVDGKTFWDALDEAISPRIKSPSSEDTTALSTFRGIFQNRPLNKGSVILLTWIN 230

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVL 178
              MLVS+S  G PT ++ATIES NVTSALFDVFFGD+PVSPTLK+SVA  L+  L
Sbjct: 231 TSNMLVSVSSGGLPTNVDATIESGNVTSALFDVFFGDSPVSPTLKSSVANQLAMTL 286

[Close]

BLAST of CmoCh09G006670 vs. TAIR10
Match: AT3G55120.1 (AT3G55120.1 Chalcone-flavanone isomerase family protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07
Identity = 44/176 (25.00%), Postives = 79/176 (44.89%), Query Frame = 1


Query: 8   VFAIIGVKVYAAGLYINSSISNELNA-WRGRSAAAIQEDSSLFNIIFQSPSEKSLQIVLV 67
           +F +IGV       Y+  +    L+  W+G++   + E    F  I     EK +++ + 
Sbjct: 57  IFTVIGV-------YLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMK 116

Query: 68  RDVDGKTFWDALDD---AISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLEPP 127
             + G+ + + + +   AI  ++   T  +  A+  F  IF+  +   G+ I        
Sbjct: 117 LPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTG 176

Query: 128 KMLVSISVDG--PPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVL 178
            + V+ S D   P TGI A IE+  +  A+ +   G N VSP  + SVA  LS ++
Sbjct: 177 SLTVAFSKDDSIPETGI-AVIENKLLAEAVLESIIGKNGVSPGTRLSVAERLSQLM 224

[Close]

BLAST of CmoCh09G006670 vs. NCBI nr
Match: gi|449456545|ref|XP_004146009.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 2.6e-86
Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLYINSS+SNELNAWRGRSAAAIQEDSSLF+IIFQS SEKSL
Sbjct: 102 TGYREKVFAIIGVKVYAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSL 161

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDVDGKTFWDALDDAISPRIKAPTP DESALSTFRSIFEGRSLKKGTFIFLTWLE
Sbjct: 162 QIVLVRDVDGKTFWDALDDAISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLE 221

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           PPKMLVSIS+DG PTGI+ATIESNNVTS+LFDVFFGD+PVSPTLKASVA GL+AVLK
Sbjct: 222 PPKMLVSISIDGSPTGIDATIESNNVTSSLFDVFFGDSPVSPTLKASVATGLAAVLK 278

[Close]

BLAST of CmoCh09G006670 vs. NCBI nr
Match: gi|778695591|ref|XP_011654021.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 2.6e-86
Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLYINSS+SNELNAWRGRSAAAIQEDSSLF+IIFQS SEKSL
Sbjct: 98  TGYREKVFAIIGVKVYAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSL 157

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDVDGKTFWDALDDAISPRIKAPTP DESALSTFRSIFEGRSLKKGTFIFLTWLE
Sbjct: 158 QIVLVRDVDGKTFWDALDDAISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLE 217

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           PPKMLVSIS+DG PTGI+ATIESNNVTS+LFDVFFGD+PVSPTLKASVA GL+AVLK
Sbjct: 218 PPKMLVSISIDGSPTGIDATIESNNVTSSLFDVFFGDSPVSPTLKASVATGLAAVLK 274

[Close]

BLAST of CmoCh09G006670 vs. NCBI nr
Match: gi|659103021|ref|XP_008452433.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 5.9e-86
Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLYINSS+SNELNAWRGRSAAAIQEDSSLF+IIFQS SEKSL
Sbjct: 136 TGYREKVFAIIGVKVYAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSCSEKSL 195

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDVDGKTFWDALDDAISPRIKAPTP DESALSTFRSIFEGRSLKKGTFIFLTWLE
Sbjct: 196 QIVLVRDVDGKTFWDALDDAISPRIKAPTPGDESALSTFRSIFEGRSLKKGTFIFLTWLE 255

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           PPKMLVSIS++GPPTGI+ATIESNNVTSALFDVFFGD+PVS TLKASVA GL+AVLK
Sbjct: 256 PPKMLVSISINGPPTGIDATIESNNVTSALFDVFFGDSPVSSTLKASVATGLAAVLK 312

[Close]

BLAST of CmoCh09G006670 vs. NCBI nr
Match: gi|659103018|ref|XP_008452432.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 5.9e-86
Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLYINSS+SNELNAWRGRSAAAIQEDSSLF+IIFQS SEKSL
Sbjct: 140 TGYREKVFAIIGVKVYAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSCSEKSL 199

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           QIVLVRDVDGKTFWDALDDAISPRIKAPTP DESALSTFRSIFEGRSLKKGTFIFLTWLE
Sbjct: 200 QIVLVRDVDGKTFWDALDDAISPRIKAPTPGDESALSTFRSIFEGRSLKKGTFIFLTWLE 259

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           PPKMLVSIS++GPPTGI+ATIESNNVTSALFDVFFGD+PVS TLKASVA GL+AVLK
Sbjct: 260 PPKMLVSISINGPPTGIDATIESNNVTSALFDVFFGDSPVSSTLKASVATGLAAVLK 316

[Close]

BLAST of CmoCh09G006670 vs. NCBI nr
Match: gi|568847969|ref|XP_006477800.1| (PREDICTED: fatty-acid-binding protein 3, chloroplastic [Citrus sinensis])

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74
Identity = 142/177 (80.23%), Postives = 162/177 (91.53%), Query Frame = 1


Query: 2   TGFREKVFAIIGVKVYAAGLYINSSISNELNAWRGRSAAAIQEDSSLFNIIFQSPSEKSL 61
           TG+REKVFAIIGVKVYAAGLYIN SI ++LNAW+G+ AA IQEDSSLF+ I+Q+PSEKSL
Sbjct: 103 TGYREKVFAIIGVKVYAAGLYINQSILSKLNAWKGKGAANIQEDSSLFDTIYQAPSEKSL 162

Query: 62  QIVLVRDVDGKTFWDALDDAISPRIKAPTPVDESALSTFRSIFEGRSLKKGTFIFLTWLE 121
           +IVLVRDVDGKTFWDALDDAISPRI+ PTPVDESALSTFRSIF+GR+L KGTFIFLTWL+
Sbjct: 163 KIVLVRDVDGKTFWDALDDAISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLD 222

Query: 122 PPKMLVSISVDGPPTGIEATIESNNVTSALFDVFFGDNPVSPTLKASVAAGLSAVLK 179
           P KMLVSISVDG P+G++ATIES NVT AL+DVFFG  PVSP+LKASVA GL+ +LK
Sbjct: 223 PSKMLVSISVDGLPSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATILK 279

The following BLAST results are available for this feature:

BLAST of CmoCh09G006670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAP3_ARATH	5.4e-63	70.45	Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=FAP3 PE=1...	[more]
CFI_CITSI	1.4e-10	28.24	Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1	[more]
CFI2_FRAAN	2.4e-10	26.90	Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1	[more]
CFI_VERHY	6.9e-10	25.88	Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1	[more]
CFI_CANGE	1.2e-09	27.38	Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1	[more]

BLAST of CmoCh09G006670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L368_CUCSA	1.8e-86	93.22	Chalcone-flavonone isomerase family protein OS=Cucumis sativus GN=Csa_4G622760 P...	[more]
A0A067EAL6_CITSI	6.1e-74	79.66	Chalcone-flavonone isomerase family protein OS=Citrus sinensis GN=CISIN_1g023649...	[more]
V4VR96_9ROSI	6.1e-74	79.66	Chalcone-flavonone isomerase family protein OS=Citrus clementina GN=CICLE_v10021...	[more]
E0CRY9_VITVI	1.4e-73	80.23	Chalcone-flavonone isomerase family protein OS=Vitis vinifera GN=VIT_19s0014g001...	[more]
M5WV36_PRUPE	8.9e-73	79.10	Chalcone-flavonone isomerase family protein OS=Prunus persica GN=PRUPE_ppa011189...	[more]

BLAST of CmoCh09G006670 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53520.1	3.0e-64	70.45	Chalcone-flavanone isomerase family protein	[more]
AT3G55120.1	2.0e-07	25.00	Chalcone-flavanone isomerase family protein	[more]

BLAST of CmoCh09G006670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456545\|ref\|XP_004146009.1\|	2.6e-86	93.22	PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis sativus]	[more]
gi\|778695591\|ref\|XP_011654021.1\|	2.6e-86	93.22	PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis sativus]	[more]
gi\|659103021\|ref\|XP_008452433.1\|	5.9e-86	93.22	PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis melo]	[more]
gi\|659103018\|ref\|XP_008452432.1\|	5.9e-86	93.22	PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis melo]	[more]
gi\|568847969\|ref\|XP_006477800.1\|	1.4e-74	80.23	PREDICTED: fatty-acid-binding protein 3, chloroplastic [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016087	Chalcone_isomerase
IPR016088	Chalcone_isomerase_3-sand
IPR016089	Chalcone_isomerase_bundle_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0016872	intramolecular lyase activity
GO:0045430	chalcone isomerase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009813	flavonoid biosynthetic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006631	fatty acid metabolic process
biological_process	GO:0009813	flavonoid biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0045430	chalcone isomerase activity
molecular_function	GO:0005504	fatty acid binding
molecular_function	GO:0016872	intramolecular lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G006670.1	CmoCh09G006670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016087	Chalcone isomerase	PFAM	PF02431	Chalcone	coord: 14..175 score: 6.1
IPR016087	Chalcone isomerase	unknown	SSF54626	Chalcone isomerase	coord: 2..178 score: 4.32
IPR016088	Chalcone isomerase, 3-layer sandwich	GENE3D	G3DSA:3.50.70.10		coord: 3..153 score: 1.9
IPR016089	Chalcone isomerase, orthogonal bundle domain	GENE3D	G3DSA:1.10.890.20		coord: 156..178 score: 2.
None	No IPR available	PANTHER	PTHR28039	FAMILY NOT NAMED	coord: 1..177 score: 3.1
None	No IPR available	PANTHER	PTHR28039:SF6	ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 18, MITOCHONDRIAL-RELATED	coord: 1..177 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh09G006670	Cucsa.058090	Cucumber (Gy14) v1	cgycmoB0071
CmoCh09G006670	CmaCh09G006840	Cucurbita maxima (Rimu)	cmacmoB027
CmoCh09G006670	Cla023295	Watermelon (97103) v1	cmowmB030
CmoCh09G006670	Csa4G622760	Cucumber (Chinese Long) v2	cmocuB016
CmoCh09G006670	MELO3C016680	Melon (DHL92) v3.5.1	cmomeB034
CmoCh09G006670	ClCG11G017050	Watermelon (Charleston Gray)	cmowcgB009
CmoCh09G006670	CSPI04G22370	Wild cucumber (PI 183967)	cmocpiB015
CmoCh09G006670	Lsi04G019660	Bottle gourd (USVL1VR-Ls)	cmolsiB013
CmoCh09G006670	Cp4.1LG06g05380	Cucurbita pepo (Zucchini)	cmocpeB034
CmoCh09G006670	MELO3C016680.2	Melon (DHL92) v3.6.1	cmomedB035
CmoCh09G006670	CsaV3_4G032710	Cucumber (Chinese Long) v3	cmocucB0019
CmoCh09G006670	Cla97C11G223090	Watermelon (97103) v2	cmowmbB009
CmoCh09G006670	Bhi09G002922	Wax gourd	cmowgoB0022
CmoCh09G006670	CsGy4G020870	Cucumber (Gy14) v2	cgybcmoB437
CmoCh09G006670	Carg03088	Silver-seed gourd	carcmoB0865

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G006670	Cucurbita pepo (Zucchini)	cmocpeB030
CmoCh09G006670	Silver-seed gourd	carcmoB0426
CmoCh09G006670	Cucurbita moschata (Rifu)	cmocmoB013
CmoCh09G006670	Cucurbita maxima (Rimu)	cmacmoB432