Lsi04G007800 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G007800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Myb family transcription factor family protein
Location	chr04 : 7328109 .. 7333179 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGCTTGCAATGTAAAAAATCAAACAATACCCTCTTTTTGTAATCTTGTTTTTATGAAATTGGGAAGTTCAATTCAAAATCACGAACGCGAAAATGAGTAGAATTTGGGTTTGGATTTGGCTCTCTTTCGTTTTCTGCTATGCAACTGCTTTACAGTTTCCCATCTTCCCGCTTCCATCATCATTTGCAATTATTTGGTTTACAAACAAAGAAATCAAAAGGAACCCATCAAATTTCAATCTCCCCCTTCCTCTCTGCTGCTTCTTTCATGGATTTCTTGTTCATATGTTCATAAAGATTTGCAGATTCTGTGTCTTTTTGAGACCTATTAAAGGTTTGTCTGAGTTTCTGTCTCTTTCAGCTGTATTATTTACATTAAGTAGTTGTTGGGCATGGGACCTAAGACCCATCAGATTCCCCTTTTTGAAAGTTTAGTAAAAACCCATCATCGTTGCTTATAATTTCTCCACCTACCTTGTAAAAATCTACTAAATCAGGGCCCCATTTCAATCCTATCTTTGTTATTTTGCATTTGAATCCCTCCATTTTCTTATTTGAATTCGTCCTACTTTTAGCAATCAACTTGCTTCTCTTTTTCTTTAACTCTCTGGGTATGTTTCTAAGGCTGAGAGGAAGTAGGAAAACACAAAGTAAAAGTTTTGATTTTTACCTATTTAAGGTCTCTTTGTAATTCTGTGACTAGATTTGGCCTTTTTTTTATCTTTAATTGTTTGTGGCTGTGGATTATGGTGGTGAAAACTGTGCAGGGTTGGTAATAATTTAGAATTTTCGTGTAACATGTGTTTAGTGTATTGCTTTAACTAGCACTCATTGATATTTGAAAAGTAAGGAGGGAGGACTTTGAGGGGTTTTCATCAATCAAGGGGTTGAAAAACCAGGCGCCATTCTATACCATTTCTGACTGTTCCTCATTGAAAGAGTTGTTAGGTAGTTTTACTTAGCTCTTCTTTTAATTAGAAAGTTGTAAAAGCACATGGGTTTCATTTTCCTTTTCTATTTGATATCTAGAATCTATGCTCTGAAGGGATTGAAGCTTTTCATCTCAACTTTGCATCTTTTTCTCTTTCTACTGATTCCAAATCTTATCTCACAATGAAATGTAAGCAAATATTTTACAGTTGAGCAGTAGAAGAAGCATAAGGAGGTAGTTGGCTTTTGGCTTTTGGCTGCTGTTGTTTTAGGGTCATAAAAGTAGAAATCATTTTTGTAGAGATATGAATTTTAGGGTTTGGACTGGTATAAGCTGTTCTTGTCAACTAGTATGATGATAATTGAGTTTTTGTTTGCTCGTTCGTTTAGTATTGGAATAAGTAACGTAAATACTCTTCTATCATCGGATGATTTCTGGATTCGTCTTTGTTTGGTATTTGTTGTCCTTTTCAGATTTCACCATCAGGGGATGAAATTCTCATTCAAATTGATTCGCCCGTCCCATTATATCTTTTGCTTTCTTTTGAAAATTGATGCGTTCTTTCTCTTTACAATGGATTTTCAGAATTTTCTCATGCAGGCAGTCATTCTCCAGTTAACTCTGTTGTTCTTTTTATTCATTGATAGGTCATCTTCACCTGAATCTAGCTTTTGATCTGTGGAGCAAATCACTTATGAAACTTTCACATGTTTTTTCTGAGTTTCATCATTATTATTATAGGTGAATCGGGATTCAACTGAACAGCATTTTTCTTTATCCATTTAAAGCCCCATTTTCTAAAACATTCTCTCTTGCCATGGATATTAGATCGTAGAAGACCTTCATAGATTTGCTTGTTCTTTCTTGTGGGAAATTTTGGAGAATAAACACAAGGCTAGATGACAGTGGATGAAAAGAGTAAGAGCTCAATTTGGAGTCGAGAACAGGACAAGGCATTTGAGAATGCTCTGGCCACTTATCCAGAGGATGCTTCAGATCGTTGGGAGAAAATTGCGGCTAACATACCTGGAAAAACTTTAGAAGAGATTAGAGATCATTACCAGCTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTCATTTCTTTGCCCTCCTATAGTTTTGCTTTTGATGGGTCTCCAAGTCATGCTAGTGAAGAGGGAACTGGAAAGAAGGGAGACTGCCATGGGCTTGACAATAGTGAATCTCATTTTGGAAATAGAGCTACAAGATCAGACCAAGAGCGTAGAAAGGGGACTGCATGGACGGAGGATGAGCACAGGTAAACTTATGATCTTTGAGTTTATTTTCTAACTTCTATTGACAAATGGATTTTCTTGAGTGTCTAAGGTGAGGTAAGTTCAACTTTTTCTTAATTTATAAAAATAAATAGTCATTGTTATGCTTTTATACATAACATGCCTGAATATGCTGTTAATTCAGCTCTCTCATTCTTCATTATCTTATATGTGTTGATGTTATCTCGAATCATGAATTACCATTTATTGTTTCCATTTATTCTTTTTACATGCCTTTTGTAAAGTCAGCCAACAATTTTGGTAAATCTGTATGAAGCTCTAAATTTTGGCTGGCTTTCCTTATACGGATGCCCATTAGCTTTTGTCATGCAAACTGATTAATAGCTATAATATTAATTTCTCTGAGAACTGTTTCCCTCTTTGGACGTTGTTATAGTGCTTACTGACACCATTATGGGAAGCCATAGTGCCTGATGTTTAGGAGGTCATATTCTCTTTTACCATAAGTTTGACATTCCTTGAATTGGATCGGTTGTACAATTGTTCTTGAGTTCTAAAGATGAGATACAATAACTGGTCAGGTTAATAGCTGGCACTGAGGATTTTTTTCTTTCTTTTTTTGATCTTTATAGACACATCACAAGTGGTTCTGAGATACCTTTTCAGCCTTTGATCATCAACCCTTTGGTTATCTATATGAAACCAGTTTTATTAGAAGAGGTTTATTAGAATAACATTGGACTGATGGTGTGGTTGTGAGCTGGAACACTAATATCTTCTCGATGCATGCACAAGGGCAATTGTGGTGATATCTTAATCATGAGTTGTAGGGAGGGACTTACGTCACTACAAATAGAGACTACAGAAAGTGTTGGATTCAAAGTTGGTATTAAAGATTATAATTGACATATTATACTCTTAGATATGATATTTTAGCAGTATTTCGAGTAACTCCATCAAGAGTTCCACTCGAGGAAGCAAAGGCTGTTGTAGTTGCTAAATCTTCTACTGTCTCATCATGATACTTCATTAGTTGTAATTATCGTTAGGTGTTATCATTCATCGGAGGCCCTTCTTTAGCTTGCCTCCTTTTATGCGAAGGGCCCTTCTTTTCTGGACTCTTTTTTTATATGCTCTTGTATTCTTTCATTTTTTCTCAAGTAAATTTCCATTTTTCATTTCCTATTGAGCTTTATACCTTCAAGGATGGATATGCCATATACATTTGTTTTTCTTCCCAATTAGAACCTGGAGATAGTTCACATATGGTTTGCTGGAGTACAAGATGGGCAAAGGAGTGTTGCTCGAGTAAATATCACGTGCAGTACATATGTTCCGTTGGGATGAGGAGATGCCCCTCCAGAATCTGGAACATGAATACAAGGCACTTAGTTTAGATTTGTTTTGTTTTTTAGATTCTAATACAAAGTCGTTAGATAGTCTACTTGCTCAGAGTTTTGGAGTCAACCACAGTGAGCTACAATTGTACAGACCTCCTCCCCTGAGAAATTCTGTTGAAAGGGTATATAATTACAAAAATACACGACTAGGGCACTCCAAGATGAAACAAACTAACAAAAATAATCTTTCTTAAGGTGACAATTTTTATGTGCCCTTACATAAAGGTTCTGCTAGGCCTCCAATCAAGAAGGTGTATAAGAGAAGGGGTAAGAAGGGAATTACACCCCAGACCCGGCTAGCTGGTTGTGGTCTTGGGTGTGCGTGCAGCAGGGGAATGTCAGTATTTAAGTGTATTGTTTGGCTAGGGCTAGTTATCTAGTATTTTGTGTATGAACAGTGGTTCATGTTAGGGACAGCTCAGCTCTCTCGCATTTGGTTGAAGGTTTTCTTGAATCTTGTGCTTAGTTCTTGTGTTGTTTTGAGACTTTCCCCTGTATTTCTTATTATCAAGTTTTAATATCACAAAGTAAGGGAGAATCCTTACAGGTTCAAACCCTCTTATCCCTTTTTAGCCAAACATTGCAGTTTTCACAAGATTATGATGGAAGATTTCACTCTTTTTCAGCTATTTGATCACAAATTCCCCCAAATTATATAGCTTATCGTGTGCTTGTGTGTGTTTTAGGCTTATGTATGTTTGATGTTTTTTTCATAATTGGTATATTTGCACGGTTTTTATGATACACTGGTCTTATCATAAATCTCATGATTAACAATAATTATCAGTACATAATACCAAGGCTTTACTTTTAGAATTTGTTACCAAGCAGGCTATTTCTTCTTGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATCTCCCGGAACTTTGTGGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAGTACTTCATTCGTCTGAACTCAATGAACAAAGATAGAAGGCGGTCGAGCATCCATGATATCACCAGTGTTGATAATGGAGATGTATCTGCAACTCAAGGTCCAATTACTGGTGAAGCAAATAGTTATGGAGGAGGAGGATCTACCAACAAATCAACCAAACAGCCTCCTCAACCACCTACTGAATCGTTTGGCGTCGGGATATACGGTGCTCCAACCGTAGGGCAGCCAGTAGGAGGGCCCTTAGTTTCGGCAGTTGGCATTCCGGTTAATACTTCTTCACCAGCACATATGGCATATGCAGTCAGCTCACTGGTTACTAGACCACCAGTAAATATGAGCCCCATAACATATTAAATCTCTCAAGCATCTGTTGTAAGGTAATGTGTTCTATTGTTTGGTCTTACAGGACATTTGCTAAATAGTATACAACTTGTTATGATGATGCTCTGTTAGATTGGATGTTTTAATTCTTTAATTGAGTTCATAAGGATTACAAAATTTGTGAAGGGTTCCTCCACCCCAAAGAGAGAGAAAGG

mRNA sequence

TTTTGCTTGCAATGTAAAAAATCAAACAATACCCTCTTTTTGTAATCTTGTTTTTATGAAATTGGGAAGTTCAATTCAAAATCACGAACGCGAAAATGAGTAGAATTTGGGTTTGGATTTGGCTCTCTTTCGTTTTCTGCTATGCAACTGCTTTACAGTTTCCCATCTTCCCGCTTCCATCATCATTTGCAATTATTTGGTTTACAAACAAAGAAATCAAAAGGAACCCATCAAATTTCAATCTCCCCCTTCCTCTCTGCTGCTTCTTTCATGGATTTCTTGTTCATATGTTCATAAAGATTTGCAGATTCTGTGTCTTTTTGAGACCTATTAAAGGTTTGTCTGAGTTTCTGTCTCTTTCAGCTGTATTATTTACATTAAGTAGTTGTTGGGCATGGGACCTAAGACCCATCAGATTCCCCTTTTTGAAAGTTTAGTAAAAACCCATCATCGTTGCTTATAATTTCTCCACCTACCTTGTAAAAATCTACTAAATCAGGGCCCCATTTCAATCCTATCTTTGTTATTTTGCATTTGAATCCCTCCATTTTCTTATTTGAATTCGTCCTACTTTTAGCAATCAACTTGCTTCTCTTTTTCTTTAACTCTCTGGGTATGTTTCTAAGGCTGAGAGGAAGTAGGAAAACACAAAGTAAAAGTTTTGATTTTTACCTATTTAAGGTCTCTTTGTAATTCTGTGACTAGATTTGGCCTTTTTTTTATCTTTAATTGTTTGTGGCTGTGGATTATGGTGGTGAAAACTGTGCAGGGTTGGTAATAATTTAGAATTTTCGTGTAACATGTGTTTAGTGTATTGCTTTAACTAGCACTCATTGATATTTGAAAAGTAAGGAGGGAGGACTTTGAGGGGTTTTCATCAATCAAGGGGTTGAAAAACCAGGCGCCATTCTATACCATTTCTGACTGTTCCTCATTGAAAGAGTTGTTAGGTCATCTTCACCTGAATCTAGCTTTTGATCTGTGGAGCAAATCACTTATGAAACTTTCACATGTTTTTTCTGAGTTTCATCATTATTATTATAGATCGTAGAAGACCTTCATAGATTTGCTTGTTCTTTCTTGTGGGAAATTTTGGAGAATAAACACAAGGCTAGATGACAGTGGATGAAAAGAGTAAGAGCTCAATTTGGAGTCGAGAACAGGACAAGGCATTTGAGAATGCTCTGGCCACTTATCCAGAGGATGCTTCAGATCGTTGGGAGAAAATTGCGGCTAACATACCTGGAAAAACTTTAGAAGAGATTAGAGATCATTACCAGCTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTCATTTCTTTGCCCTCCTATAGTTTTGCTTTTGATGGGTCTCCAAGTCATGCTAGTGAAGAGGGAACTGGAAAGAAGGGAGACTGCCATGGGCTTGACAATAGTGAATCTCATTTTGGAAATAGAGCTACAAGATCAGACCAAGAGCGTAGAAAGGGGACTGCATGGACGGAGGATGAGCACAGGCTATTTCTTCTTGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATCTCCCGGAACTTTGTGGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAGTACTTCATTCGTCTGAACTCAATGAACAAAGATAGAAGGCGGTCGAGCATCCATGATATCACCAGTGTTGATAATGGAGATGTATCTGCAACTCAAGGTCCAATTACTGGTGAAGCAAATAGTTATGGAGGAGGAGGATCTACCAACAAATCAACCAAACAGCCTCCTCAACCACCTACTGAATCGTTTGGCGTCGGGATATACGGTGCTCCAACCGTAGGGCAGCCAGTAGGAGGGCCCTTAGTTTCGGCAGTTGGCATTCCGGTTAATACTTCTTCACCAGCACATATGGCATATGCAGTCAGCTCACTGGTTACTAGACCACCAGTAAATATGAGCCCCATAACATATTAAATCTCTCAAGCATCTGTTGTAAGGTAATGTGTTCTATTGTTTGGTCTTACAGGACATTTGCTAAATAGTATACAACTTGTTATGATGATGCTCTGTTAGATTGGATGTTTTAATTCTTTAATTGAGTTCATAAGGATTACAAAATTTGTGAAGGGTTCCTCCACCCCAAAGAGAGAGAAAGG

Coding sequence (CDS)

ATGACAGTGGATGAAAAGAGTAAGAGCTCAATTTGGAGTCGAGAACAGGACAAGGCATTTGAGAATGCTCTGGCCACTTATCCAGAGGATGCTTCAGATCGTTGGGAGAAAATTGCGGCTAACATACCTGGAAAAACTTTAGAAGAGATTAGAGATCATTACCAGCTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTCATTTCTTTGCCCTCCTATAGTTTTGCTTTTGATGGGTCTCCAAGTCATGCTAGTGAAGAGGGAACTGGAAAGAAGGGAGACTGCCATGGGCTTGACAATAGTGAATCTCATTTTGGAAATAGAGCTACAAGATCAGACCAAGAGCGTAGAAAGGGGACTGCATGGACGGAGGATGAGCACAGGCTATTTCTTCTTGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATCTCCCGGAACTTTGTGGTGACGAGAACACCTACTCAAGTGGCAAGCCATGCACAAAAGTACTTCATTCGTCTGAACTCAATGAACAAAGATAGAAGGCGGTCGAGCATCCATGATATCACCAGTGTTGATAATGGAGATGTATCTGCAACTCAAGGTCCAATTACTGGTGAAGCAAATAGTTATGGAGGAGGAGGATCTACCAACAAATCAACCAAACAGCCTCCTCAACCACCTACTGAATCGTTTGGCGTCGGGATATACGGTGCTCCAACCGTAGGGCAGCCAGTAGGAGGGCCCTTAGTTTCGGCAGTTGGCATTCCGGTTAATACTTCTTCACCAGCACATATGGCATATGCAGTCAGCTCACTGGTTACTAGACCACCAGTAAATATGAGCCCCATAACATATTAA

Protein sequence

MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDDVNQIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNRATRSDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTESFGVGIYGAPTVGQPVGGPLVSAVGIPVNTSSPAHMAYAVSSLVTRPPVNMSPITY

Homology

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BLAST of Lsi04G007800 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.5e-48
Identity = 105/231 (45.45%), Postives = 143/231 (61.90%), Query Frame = 1


Query: 3   VDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDDVN 62
           ++E   ++ W+  ++KAFENALA + E+  +RWE++A  +PGKT+ ++   Y+ L DDV+
Sbjct: 17  LEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVS 76

Query: 63  QIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNRATRS------DQE 122
            IE+GF+ +P YS          S   T + G  HG D  +  +G    +S      +QE
Sbjct: 77  SIEAGFVPVPGYS---------TSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQE 136

Query: 123 RRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKD 182
           R+KG  WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  KD
Sbjct: 137 RKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKD 196

Query: 183 RRRSSIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTES 228
           +RR+SIHDIT+V+  D + T  P                  K+PP  P  S
Sbjct: 197 KRRASIHDITTVNLSD-NQTPSP----------------DNKKPPSSPDHS 221

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BLAST of Lsi04G007800 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.4e-25
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 1


Query: 100 DNSESHFGNRATRSDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQV 159
           D++  H  N    S +ER++G  WTE+EH+LFLLGL K GKGDWR ISRNFV TRTPTQV
Sbjct: 78  DDAVQHQSN----SGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQV 137

Query: 160 ASHAQKYFIRLNSMNKDRRRSSIHDITS 188
           ASHAQKYF+R +++N+ RRRSS+ DIT+
Sbjct: 138 ASHAQKYFLRRSNLNRRRRRSSLFDITT 161

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BLAST of Lsi04G007800 vs. Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.3e-14
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1


Query: 1  MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
          M  +  S S+ W+R+++K FE ALATY +D  DRW  +A  + GK+ EE+R HY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VNQIESGFISLPSY 75
          VN IESG    P+Y
Sbjct: 61 VNDIESGRYPHPNY 74

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BLAST of Lsi04G007800 vs. Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.3e-14
Identity = 33/66 (50.00%), Postives = 48/66 (72.73%), Query Frame = 1


Query: 9  SSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDDVNQIESGF 68
          S  W+ +Q+KAFE ALATY +D  +RW+ +A  + GKT EE++ HY+LLV D+N IE+G 
Sbjct: 11 SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGH 70

Query: 69 ISLPSY 75
          +  P+Y
Sbjct: 71 VPFPNY 76

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BLAST of Lsi04G007800 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-12
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1


Query: 1  MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
          M  + +S  S W+  Q+K FE ALA Y +D  DRW  +A  + GKT+EE++ HY +LV+D
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNQIESGFISLPSY 75
          +  IE+G + LP+Y
Sbjct: 61 LINIETGRVPLPNY 74

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BLAST of Lsi04G007800 vs. TrEMBL
Match: A0A0A0KV25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579040 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.1e-138
Identity = 254/286 (88.81%), Postives = 267/286 (93.36%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTVD++SKSSIWSREQDKAFENALATYPEDASDRWEKIA ++PGKTLEE++DHY+LLVDD
Sbjct: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNRATRSDQERRKG 120
           VNQIESGFI LPSYSF+ DGSPSHASEEG+G KGD HGLDNSES FG++A RSDQERRKG
Sbjct: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSATQGPITGEANSY--GGGGSTNKSTKQPPQPPTESFGVGIYGAPTV 240
           SIHDITSVDNGDVSA QGPITGEANSY  GGGGSTNKSTKQPPQPP  SFGVGIYGAPTV
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGGGGGGSTNKSTKQPPQPPIGSFGVGIYGAPTV 240

Query: 241 GQPVGGPLVSAVGIP--VNTSSPAHMAYAVSSLVTRPPVNMSPITY 283
           GQPVGGP VSAVG P  VNT  PAHMAY+VSSL TRPPVNMSPITY
Sbjct: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY 286

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BLAST of Lsi04G007800 vs. TrEMBL
Match: V4VEK0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 5.3e-112
Identity = 212/289 (73.36%), Postives = 245/289 (84.78%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTVDE   SS+W++EQDKAFENAL +YPEDASDRWEKIAA++PGK+LEEI+ HY+LLVDD
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGT--GKKGDCHGLDNSESHFGNRATRSDQERR 120
           VN+IESG + LPSY+ + DGS SHA +EGT  GKKG  +G  NSES+ GN+++RSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180
           KG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTESFGVGIYGAPTV 240
           RSSIHDITSV+NGD+SA QGPITG+ N  GGGGS+ KS+KQPPQ      GVG+YGAPT+
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGIPVNTSSPAHMAYAV-----SSLVTRPPVNMSPITY 283
           GQP+GGPLVSAVG PVN  +PAHMAY V      ++V   P+N+SP+ Y
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRATVPGTVVPGAPMNVSPMPY 288

[Close]

BLAST of Lsi04G007800 vs. TrEMBL
Match: A0A067G2J5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 5.3e-112
Identity = 212/289 (73.36%), Postives = 245/289 (84.78%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTVDE   SS+W++EQDKAFENAL +YPEDASDRWEKIAA++PGK+LEEI+ HY+LLVDD
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGT--GKKGDCHGLDNSESHFGNRATRSDQERR 120
           VN+IESG + LPSY+ + DGS SHA +EGT  GKKG  +G  NSES+ GN+++RSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180
           KG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTESFGVGIYGAPTV 240
           RSSIHDITSV+NGD+SA QGPITG+ N  GGGGS+ KS+KQPPQ      GVG+YGAPT+
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGIPVNTSSPAHMAYAV-----SSLVTRPPVNMSPITY 283
           GQP+GGPLVSAVG PVN  +PAHMAY V      ++V   P+N+SP+ Y
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPY 288

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BLAST of Lsi04G007800 vs. TrEMBL
Match: B9HGD2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s07150g PE=4 SV=2)

HSP 1 Score: 408.7 bits (1049), Expect = 5.8e-111
Identity = 206/287 (71.78%), Postives = 235/287 (81.88%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           M+VDE    S+W+RE DKAFENALATYPEDASDRWEKIA ++PGKTLEEI+ HY+LLV+D
Sbjct: 1   MSVDEGGSGSLWTREHDKAFENALATYPEDASDRWEKIAEDVPGKTLEEIKHHYELLVED 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNRATRSDQERRKG 120
           +NQIE+G + LP YS + +GS SHA +EGTGKKG   G  NSES+ GN+A+RSDQERRKG
Sbjct: 61  INQIEAGCVPLPCYSSSSEGSTSHAGDEGTGKKGGHLGHHNSESNHGNKASRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTESFGVGIYGAPTVGQ 240
           SIHDITSV NGD++  QGPITG+ N     GS+ K+ KQPP  P    GVGIYG PT+GQ
Sbjct: 181 SIHDITSVGNGDIATPQGPITGQTNGSAVAGSSGKAAKQPPPHPAGPPGVGIYGPPTIGQ 240

Query: 241 PVGGPLVSAVGIPVNTSSPAHMAYAV-----SSLVTRPPVNMSPITY 283
           P+GGPLVSAVG PVN S+PAHMAY V      ++V   P+NM P+TY
Sbjct: 241 PIGGPLVSAVGTPVNLSAPAHMAYGVRAPVPGAMVPGAPMNMGPMTY 287

[Close]

BLAST of Lsi04G007800 vs. TrEMBL
Match: A0A061E9T3_THECC (DNA binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_007672 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.4e-109
Identity = 210/288 (72.92%), Postives = 238/288 (82.64%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTVDE   SS WSREQDKAFENALATY ED+SDRWEKIAA++PGKTLEEI+ HY+LL DD
Sbjct: 1   MTVDEAGSSSEWSREQDKAFENALATYAEDSSDRWEKIAADVPGKTLEEIKKHYELLEDD 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCH-GLDNSESHFGNRATRSDQERRK 120
           V++IESG + LPSY+ + +GS   A +EGTGKKG  H G  NSES+ G++ +RSDQERRK
Sbjct: 61  VSRIESGCVPLPSYN-SLEGSAGLAGDEGTGKKGSSHLGHYNSESNNGSKNSRSDQERRK 120

Query: 121 GTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
           G AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTESFGVGIYGAPTVG 240
           SSIHDITSV NGD+SA QGPITG++N    GGS+ KSTKQPPQ P     VG+YGAPT+G
Sbjct: 181 SSIHDITSVGNGDISAPQGPITGQSNGIATGGSSGKSTKQPPQHPAAPPAVGMYGAPTIG 240

Query: 241 QPVGGPLVSAVGIPVNTSSPAHMAYAV-----SSLVTRPPVNMSPITY 283
           QP+GGPLVSAVG PVN  +PAHMAY V      ++V   P+NM P+TY
Sbjct: 241 QPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNMGPVTY 287

[Close]

BLAST of Lsi04G007800 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 297.7 bits (761), Expect = 7.3e-81
Identity = 175/308 (56.82%), Postives = 209/308 (67.86%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTV+E S  S+WSRE D AFE ALA   +++ +RWEKIAA++PGK++E+I++HY+LLV+D
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEG-TGKKGDCHGLDNSESHFGNRA--TRSDQER 120
           V +IESG + LP+Y  + +GS  HA +EG + KKG      NS +   N+A  ++SDQER
Sbjct: 61  VTRIESGCVPLPAYG-SPEGSNGHAGDEGASSKKG-----GNSHAGESNQAGKSKSDQER 120

Query: 121 RKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDR 180
           RKG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDR
Sbjct: 121 RKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDR 180

Query: 181 RRSSIHDITSVDNGDVSATQGPITGEANSYGG------------GGSTNKSTKQ-----P 240
           RRSSIHDITSV N DVS  QGPITG+ NS                G  NKS KQ     P
Sbjct: 181 RRSSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAP 240

Query: 241 PQPPTESFGVGIYGAPTVGQPVGGPLVSAVGIPVNTSSPAHMAYAV------SSLVTRPP 283
           P PP       +YG P +GQP       AVG PVN  +P HMAY V       S+V    
Sbjct: 241 PGPP-------MYGTPAIGQP-------AVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAA 288

[Close]

BLAST of Lsi04G007800 vs. TAIR10
Match: AT1G49010.1 (AT1G49010.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 221.9 bits (564), Expect = 5.1e-58
Identity = 134/276 (48.55%), Postives = 178/276 (64.49%), Query Frame = 1


Query: 6   KSKSSIWSREQDKAFENALATY---PEDASDRWEKIAANIPGKTLEEIRDHYQLLVDDVN 65
           +S  + WSRE++KAFENA+A +    E   D+W K+++ +P K LEE++ HYQ+L++DV 
Sbjct: 2   ESVVATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVK 61

Query: 66  QIESGFISLPSY----------SFAFDGSPSH--ASEEGTGKKGDCHGLDNSESHFGNRA 125
            IE+G + LP Y          + A   SP++  +   G+ +K    G     S  G R+
Sbjct: 62  AIENGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRS 121

Query: 126 --TRSDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 185
             +R++QERRKG  WTE+EHRLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFI
Sbjct: 122 GGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 181

Query: 186 RLNSMNKDRRRSSIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQ--PPTE 245
           RLNSMN+DRRRSSIHDIT+V+N   + T G    +   +       +   QP Q  PPT 
Sbjct: 182 RLNSMNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQPQPQPQQHHPPTM 241

Query: 246 SFGVGIYGAPTVGQPVGGP---LVSAVGIPVNTSSP 260
           + G+G+YG   VGQP+  P   + SAVG PV    P
Sbjct: 242 A-GLGMYGGAPVGQPIIAPPDHMGSAVGTPVMLPPP 276

[Close]

BLAST of Lsi04G007800 vs. TAIR10
Match: AT5G04760.1 (AT5G04760.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 5.9e-46
Identity = 96/182 (52.75%), Postives = 131/182 (71.98%), Query Frame = 1


Query: 9   SSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDDVNQIESGF 68
           SS W+R +DK FE AL  +PE + +RWE+IA  +  K+  E+R+HY++LV DV +I+SG 
Sbjct: 3   SSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSGR 62

Query: 69  ISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNS-ESHFGNRATRSDQERRKGTAWTEDE 128
           + +P Y    D S + A+           G D++ +  FG++    + ER++GT WTE+E
Sbjct: 63  VDVPDY---MDDSAAAAA-----------GWDSAGQISFGSK--HGESERKRGTPWTENE 122

Query: 129 HRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 188
           H+LFL+GL +YGKGDWRSISRN VVTRTPTQVASHAQKYF+R NS+ K+R+RSSIHDIT+
Sbjct: 123 HKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITT 167

Query: 189 VD 190
           VD
Sbjct: 183 VD 167

[Close]

BLAST of Lsi04G007800 vs. TAIR10
Match: AT2G38090.1 (AT2G38090.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 181.4 bits (459), Expect = 7.7e-46
Identity = 98/221 (44.34%), Postives = 137/221 (61.99%), Query Frame = 1


Query: 5   EKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDDVNQI 64
           ++++ + W+ E++K FENALA Y +D  DRW ++AA +PGKT+ ++   Y+ L +DV+ I
Sbjct: 22  QENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDI 81

Query: 65  ESGFISLPSY---SFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNRATRSDQERRKGT 124
           E+G I +P Y   SF  D      +    G   + +    +    G+ A  ++ ER+KG 
Sbjct: 82  EAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAAGGKRGSAARTAEHERKKGV 141

Query: 125 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSS 184
            WTE+EHR FL+GL KYGKGDWR+I+RNFV TRTPTQVASHAQKYFIR  +  KD+RRSS
Sbjct: 142 PWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRSS 201

Query: 185 IHDITSV---DNGDVSATQGPITGEANSYGGGGSTNKSTKQ 220
           IHDIT+V   D+ D +A          S    G   + T +
Sbjct: 202 IHDITTVNIPDSPDAAAADNATANAPCSPPSVGGNQRETSE 242

[Close]

BLAST of Lsi04G007800 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-45
Identity = 99/190 (52.11%), Postives = 126/190 (66.32%), Query Frame = 1


Query: 3   VDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDDVN 62
           V    + + W+  ++KAFENALA Y ++  DRW+K+AA IPGKT+ ++   Y  L  DV+
Sbjct: 25  VAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVS 84

Query: 63  QIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNR--ATRSDQ-ERRK 122
            IE+G I +P Y       P      G G  G C+G          R  A RS + ER+K
Sbjct: 85  SIEAGLIPVPGY---ITSPPFTLDWAGGG--GGCNGFKPGHQVCNKRSQAGRSPELERKK 144

Query: 123 GTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 182
           G  WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  KD+RR
Sbjct: 145 GVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRR 204

Query: 183 SSIHDITSVD 190
           +SIHDIT+V+
Sbjct: 205 ASIHDITTVN 209

[Close]

BLAST of Lsi04G007800 vs. NCBI nr
Match: gi|449458740|ref|XP_004147105.1| (PREDICTED: transcription factor DIVARICATA [Cucumis sativus])

HSP 1 Score: 500.7 bits (1288), Expect = 1.6e-138
Identity = 254/286 (88.81%), Postives = 267/286 (93.36%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTVD++SKSSIWSREQDKAFENALATYPEDASDRWEKIA ++PGKTLEE++DHY+LLVDD
Sbjct: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNRATRSDQERRKG 120
           VNQIESGFI LPSYSF+ DGSPSHASEEG+G KGD HGLDNSES FG++A RSDQERRKG
Sbjct: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSATQGPITGEANSY--GGGGSTNKSTKQPPQPPTESFGVGIYGAPTV 240
           SIHDITSVDNGDVSA QGPITGEANSY  GGGGSTNKSTKQPPQPP  SFGVGIYGAPTV
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGGGGGGSTNKSTKQPPQPPIGSFGVGIYGAPTV 240

Query: 241 GQPVGGPLVSAVGIP--VNTSSPAHMAYAVSSLVTRPPVNMSPITY 283
           GQPVGGP VSAVG P  VNT  PAHMAY+VSSL TRPPVNMSPITY
Sbjct: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY 286

[Close]

BLAST of Lsi04G007800 vs. NCBI nr
Match: gi|659090216|ref|XP_008445896.1| (PREDICTED: transcription factor DIVARICATA [Cucumis melo])

HSP 1 Score: 497.3 bits (1279), Expect = 1.8e-137
Identity = 253/287 (88.15%), Postives = 266/287 (92.68%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTVDE+ KSSIWSREQDKAFENALATYPEDASDRWEKIA ++PGKTL+EI+DHY+LLVDD
Sbjct: 1   MTVDEERKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLKEIKDHYELLVDD 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNRATRSDQERRKG 120
           VNQIESGF+ LPSYSF+ DGSPSHASEEG+GKKGD HGLDNSES FG++A RSDQERRKG
Sbjct: 61  VNQIESGFVPLPSYSFSSDGSPSHASEEGSGKKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSATQGPITGEANSY---GGGGSTNKSTKQPPQPPTESFGVGIYGAPT 240
           SIHDITSVDNGDVSA QGPITGEANSY   GGGGSTNKSTKQPPQPP  SFGVGIYGAPT
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGGVGGGGSTNKSTKQPPQPPIGSFGVGIYGAPT 240

Query: 241 VGQPVGGPLVSAVGIP--VNTSSPAHMAYAVSSLVTRPPVNMSPITY 283
           VGQPVGGP VSAVG P  VNT SPAHM Y+VSSL TRP VNMSPITY
Sbjct: 241 VGQPVGGPFVSAVGTPVAVNTPSPAHMPYSVSSLATRPSVNMSPITY 287

[Close]

BLAST of Lsi04G007800 vs. NCBI nr
Match: gi|641851056|gb|KDO69927.1| (hypothetical protein CISIN_1g022439mg [Citrus sinensis])

HSP 1 Score: 412.1 bits (1058), Expect = 7.6e-112
Identity = 212/289 (73.36%), Postives = 245/289 (84.78%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTVDE   SS+W++EQDKAFENAL +YPEDASDRWEKIAA++PGK+LEEI+ HY+LLVDD
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGT--GKKGDCHGLDNSESHFGNRATRSDQERR 120
           VN+IESG + LPSY+ + DGS SHA +EGT  GKKG  +G  NSES+ GN+++RSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180
           KG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTESFGVGIYGAPTV 240
           RSSIHDITSV+NGD+SA QGPITG+ N  GGGGS+ KS+KQPPQ      GVG+YGAPT+
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGIPVNTSSPAHMAYAV-----SSLVTRPPVNMSPITY 283
           GQP+GGPLVSAVG PVN  +PAHMAY V      ++V   P+N+SP+ Y
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPY 288

[Close]

BLAST of Lsi04G007800 vs. NCBI nr
Match: gi|567890255|ref|XP_006437648.1| (hypothetical protein CICLE_v10032259mg [Citrus clementina])

HSP 1 Score: 412.1 bits (1058), Expect = 7.6e-112
Identity = 212/289 (73.36%), Postives = 245/289 (84.78%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           MTVDE   SS+W++EQDKAFENAL +YPEDASDRWEKIAA++PGK+LEEI+ HY+LLVDD
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGT--GKKGDCHGLDNSESHFGNRATRSDQERR 120
           VN+IESG + LPSY+ + DGS SHA +EGT  GKKG  +G  NSES+ GN+++RSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSESN-GNKSSRSDQERR 120

Query: 121 KGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180
           KG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTESFGVGIYGAPTV 240
           RSSIHDITSV+NGD+SA QGPITG+ N  GGGGS+ KS+KQPPQ      GVG+YGAPT+
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGGSSGKSSKQPPQHSAGPPGVGMYGAPTM 240

Query: 241 GQPVGGPLVSAVGIPVNTSSPAHMAYAV-----SSLVTRPPVNMSPITY 283
           GQP+GGPLVSAVG PVN  +PAHMAY V      ++V   P+N+SP+ Y
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGVRATVPGTVVPGAPMNVSPMPY 288

[Close]

BLAST of Lsi04G007800 vs. NCBI nr
Match: gi|566180022|ref|XP_006380485.1| (hypothetical protein POPTR_0007s07150g [Populus trichocarpa])

HSP 1 Score: 408.7 bits (1049), Expect = 8.4e-111
Identity = 206/287 (71.78%), Postives = 235/287 (81.88%), Query Frame = 1


Query: 1   MTVDEKSKSSIWSREQDKAFENALATYPEDASDRWEKIAANIPGKTLEEIRDHYQLLVDD 60
           M+VDE    S+W+RE DKAFENALATYPEDASDRWEKIA ++PGKTLEEI+ HY+LLV+D
Sbjct: 1   MSVDEGGSGSLWTREHDKAFENALATYPEDASDRWEKIAEDVPGKTLEEIKHHYELLVED 60

Query: 61  VNQIESGFISLPSYSFAFDGSPSHASEEGTGKKGDCHGLDNSESHFGNRATRSDQERRKG 120
           +NQIE+G + LP YS + +GS SHA +EGTGKKG   G  NSES+ GN+A+RSDQERRKG
Sbjct: 61  INQIEAGCVPLPCYSSSSEGSTSHAGDEGTGKKGGHLGHHNSESNHGNKASRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSATQGPITGEANSYGGGGSTNKSTKQPPQPPTESFGVGIYGAPTVGQ 240
           SIHDITSV NGD++  QGPITG+ N     GS+ K+ KQPP  P    GVGIYG PT+GQ
Sbjct: 181 SIHDITSVGNGDIATPQGPITGQTNGSAVAGSSGKAAKQPPPHPAGPPGVGIYGPPTIGQ 240

Query: 241 PVGGPLVSAVGIPVNTSSPAHMAYAV-----SSLVTRPPVNMSPITY 283
           P+GGPLVSAVG PVN S+PAHMAY V      ++V   P+NM P+TY
Sbjct: 241 PIGGPLVSAVGTPVNLSAPAHMAYGVRAPVPGAMVPGAPMNMGPMTY 287

The following BLAST results are available for this feature:

BLAST of Lsi04G007800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DIV_ANTMA	4.5e-48	45.45	Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1	[more]
MY1R1_SOLTU	5.4e-25	63.64	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	[more]
RADL3_ARATH	4.3e-14	48.65	Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1	[more]
RADL1_ARATH	4.3e-14	50.00	Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1	[more]
RADL6_ARATH	1.4e-12	44.59	Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1	[more]

BLAST of Lsi04G007800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV25_CUCSA	1.1e-138	88.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579040 PE=4 SV=1	[more]
V4VEK0_9ROSI	5.3e-112	73.36	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1	[more]
A0A067G2J5_CITSI	5.3e-112	73.36	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1	[more]
B9HGD2_POPTR	5.8e-111	71.78	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s07150g PE=4 SV=2	[more]
A0A061E9T3_THECC	1.4e-109	72.92	DNA binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_007672 PE=4 SV...	[more]

BLAST of Lsi04G007800 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08520.1	7.3e-81	56.82	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	5.1e-58	48.55	Duplicated homeodomain-like superfamily protein	[more]
AT5G04760.1	5.9e-46	52.75	Duplicated homeodomain-like superfamily protein	[more]
AT2G38090.1	7.7e-46	44.34	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	1.0e-45	52.11	Homeodomain-like transcriptional regulator	[more]

BLAST of Lsi04G007800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458740\|ref\|XP_004147105.1\|	1.6e-138	88.81	PREDICTED: transcription factor DIVARICATA [Cucumis sativus]	[more]
gi\|659090216\|ref\|XP_008445896.1\|	1.8e-137	88.15	PREDICTED: transcription factor DIVARICATA [Cucumis melo]	[more]
gi\|641851056\|gb\|KDO69927.1\|	7.6e-112	73.36	hypothetical protein CISIN_1g022439mg [Citrus sinensis]	[more]
gi\|567890255\|ref\|XP_006437648.1\|	7.6e-112	73.36	hypothetical protein CICLE_v10032259mg [Citrus clementina]	[more]
gi\|566180022\|ref\|XP_006380485.1\|	8.4e-111	71.78	hypothetical protein POPTR_0007s07150g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017930	Myb_dom
IPR017884	SANT_dom
IPR009057	Homeobox-like_sf
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G007800.1	Lsi04G007800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..56 score: 7.0E-9coord: 122..166 score: 1.5
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 119..169 score: 1.9E-11coord: 8..60 score: 5.3
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 120..169 score: 4.0
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 5..58 score: 6.0E-6coord: 119..165 score: 5.6
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 117..172 score: 1.66E-16coord: 10..66 score: 3.93
IPR017884	SANT domain	PROFILE	PS51293	SANT	coord: 7..62 score:
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 115..171 score: 18
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 4..208 score: 1.2E-143coord: 229..282 score: 1.2E
None	No IPR available	PANTHER	PTHR24078:SF279	DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN	coord: 4..208 score: 1.2E-143coord: 229..282 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G007800	Csa5G579040	Cucumber (Chinese Long) v2	culsiB368
Lsi04G007800	CSPI05G20320	Wild cucumber (PI 183967)	cpilsiB372
Lsi04G007800	Cucsa.280970	Cucumber (Gy14) v1	cgylsiB454
Lsi04G007800	CmaCh04G012690	Cucurbita maxima (Rimu)	cmalsiB676
Lsi04G007800	CmoCh04G013410	Cucurbita moschata (Rifu)	cmolsiB669
Lsi04G007800	Cla020042	Watermelon (97103) v1	lsiwmB331
Lsi04G007800	MELO3C011759	Melon (DHL92) v3.5.1	lsimeB281
Lsi04G007800	ClCG02G014200	Watermelon (Charleston Gray)	lsiwcgB275
Lsi04G007800	MELO3C005072.2	Melon (DHL92) v3.6.1	lsimedB295
Lsi04G007800	MELO3C011759.2	Melon (DHL92) v3.6.1	lsimedB297
Lsi04G007800	Cla97C02G039960	Watermelon (97103) v2	lsiwmbB275
Lsi04G007800	Bhi07G000904	Wax gourd	lsiwgoB382
Lsi04G007800	Cp4.1LG01g09980	Cucurbita pepo (Zucchini)	cpelsiB358
Lsi04G007800	CsGy5G019840	Cucumber (Gy14) v2	cgyblsiB337
Lsi04G007800	Carg17772	Silver-seed gourd	carlsiB434
Lsi04G007800	Carg02046	Silver-seed gourd	carlsiB765
Lsi04G007800	CsaV3_5G029080	Cucumber (Chinese Long) v3	cuclsiB393

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi04G007800	Lsi09G008540	Bottle gourd (USVL1VR-Ls)	lsilsiB004

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G007800	Silver-seed gourd	carlsiB662
Lsi04G007800	Cucurbita maxima (Rimu)	cmalsiB384
Lsi04G007800	Cucurbita moschata (Rifu)	cmolsiB369
Lsi04G007800	Cucurbita pepo (Zucchini)	cpelsiB031