CmoCh04G013410 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G013410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Myb family transcription factor family protein
Location	Cmo_Chr04 : 6827542 .. 6830875 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCATCAGAGTCCCCTTTTCGTAAAGTTCAGTAAAACCCATCATCGTTGCTTGTAATTTCTTCACCTACCTTGTAAAAATCTACTGAATCAGGGCCCCATTATTTGAATCCCTCCCTTTTTTGTTTCAACTTTCTCTGGGTATGTTTCTAAGGCTGAGAGGAAGTAAGAACAGTGAATGTTTTGATTCTTACTCATTTAGGGCTCTTTGTGCTACTGGATTTGGCCATTTTGATCTTGTTTGTGGCTATGGATTATGAGTTTCTGGGTTTTTCATCAATCAAGGGGTTGAAGAACCAGGCACTGTTCTTTATCACTTCTGGCTGTTCTTGAATGAAAGAGTAGTAAAAGCACATGGGTTTCATTTTCCTTTGCTTTTTAGTGCCTAGAATCTATGCTCTGAAGGGATTGAAGCTTTTCATCTCAACTTTGCATCTTTTTCTCTTTTCATTGATGCCAAATCTTATCTCACAATGAAGTGTTAGCTGCTTGTGAAATGGTTTTACTATTTGAGTAGCTGAAGAACATAGAGCCTAAGGAGGTAGTTGGCTTTTGGCGGCTGTTGTTTTAGGTTCATAAAAGTAGATATCAATTTATAACGTGTTCTTGTCAAATGATACGATGATTTCTTGATTCATCTTTGTTTGATATTTATTGTTGTTCTTCACAGATTTCATCATCAAAGGATGAAATTCTTTCCCATTATATCTTTTGCTTTCTTTTGAAAATTGATGTGTTCTCTTACTCTCCAATGGATTTTCAGATTTTCCCCATTTCCTAAAGCGTTCTTGACATGGATTTTAGATCATAGCAGAGCTTCATAGATTTGTCTGTTCTTGGGGAATAAGCACAAGGCTAGATGGCGGTGGACGAAAAGAGTAAGAGCTCGATTTGGAGTCGAGATCAGGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTGCTGATCGTTGGGAGAAGATTGCGGCGGACATAGCTGGAAGAACAGTAGAAGAGATAAAAGATCATTACAAGGTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTGGTTCCTCTGCCGTGCTATAGCTTTTGTTCTGATGGGTCTCCAAGTGATGATACTAAAAAGAAGGGAGACCACCATGGGGTTGATAATAGTGAACCTTGTATGGGAAATAAAGCTCCAAGATCTGACCAAGAGCGTAGAAAGGGGACTGCATGGACAGAAGATGAGCACAGGTAAGCTTTTGATGATGTGCTTTTAATTCAGCTCTCTCATTCTTCATCATATCTTCATATCTTGTATGTGTTGATGGTAAGCTCATCCAAACTGCAATGGAAATGGGGCAGAGAGAAGTTTCCATCTCTTTTCTCAACTCTCTTCCCTTCTGTTCTATGGTTTGAAGTTCTTAAGGATGAGATAGGATAAGTATGACCTTATTTGCTATAGGTTGTACAACTTGTGTCCTTTGAGTTCTAAAAATGCGTATGCTAGGAAGAGGTTTCCACACCCTTATAAAAAATGTTTCGTTTCCTTCTCCAACTGATATGGGATCTCACGATCCATTCCCCTTTAGGGCCTAGCGTCCTCACTGGCACACCCCGCCTGGTGTCCACCCCCCTTCGAGGCCCAACATTCTCACTGTCACATCGCCTGGTGTCTATCTCCTTCATAGCCCAACGTCCTCGCTGACACACTCCTCAGTGTCCACCCCCTTTGAGACCAGCGTCCTTGCTCACACACCACCTAGTGTCTGACTTTGATACCAACTGTGACAACCCAACCCCACCGCTAGTAGATATTGATCTCACAATATTGTGAGATCCCACGTCGGTCGTAGAAGGGAACGAAACATTTTTATAAGGATGTAGAAACTAATCCATAGCAGACGCGTTTTAAAAATCTTAAGAGGAAGCTCGAAAGGGAAAGTCCAAATTGAACAATATTTGCTAGCGATGGGCTTGGACTCCTGCAACATACTATAAGTGGTCAGCATATTAGCTGCAGTGAGGATATTCCTTTTTCTTTTCTGTTTAGGCACATCACAAGTGGTTCGAACATACCTTCTCAGTCTTTGATCATCTACCCTTTGGTTACCCGGATGAAACAAAATTTTATTAGACGGGTTAACTACAATTGTTGAGAATTGTTGGGAGAGAGTTCTACGATGACTAATTAAGGGGAAGATTATAGGTTTATAAGTAAGGAATACTATATCCATTGATACGAGGCATTTTGGGGAAACTAAAAGTAAAGCCATGAGAGCTTATGCTCAAAGTAGACCGTTCGCGATTCCTAACATCAATAACATAGGACGGAAGCTATGGTTCTAAGATGGAACACTGGTATATTTGCACGGTTGTGCGTTTGTTTAATTGTTTTTACTAAGAAGATCTTGCCATAAATTCATTAATCATTTTGGGATGATACCAAGGCTTTACTTTGAGCATTTGTTACCAAACAGACTATTTCTTCTGGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATTTCCCGGAACTTTGTGGTGACAAGAACACCGACTCAAGTGGCAAGCCATGCTCAAAAGTACTTCATTCGTCTGAACTCAATGAACAAAGACAGAAGGCGGTCGAGCATCCATGATATCACCCGTGTCGATAATGGAGATGTATCTGCACATCAAGGACCAATTACTGGTGAAGCAAATAGTTCTGGAGGAGGAGGAGGAAGCTCTACCAGCAACTCCTCCAAACAGCCATCTCAACCACCTACTGGATCATTCGATGTCGGGATATACGGCGCTCTAGCCGTCGAGCAGCCCGTAGGAGGTCCCTTTGGTCCGGCAGTTGCCACTCCGGTTAGTACTCCTCCAGCAGCACATACGACATATGCAGTCAGATCCCGTGTAGTGAACTCACTGGTTCGTAGACCACCAGTGAATATGAGCTCCATAACATATTAAAGGTAATGTTCTGTTCTGTTCTGTTGTGGCATAGCTTATCTGAAGAGTGGTCTTATGTTCTTGTTTGGTCTCACAGGACATTTACTTGTTAGTACTTGTTTCACGAATGAATGATGTTTGGGATTCAATGTTCTTTTCCAAGCCATTGGATTAAGGTTGTTTCATTTTAGTTCAGTAATTCATAGGAGTGTTGAGAACCCAATCGAATCGAGTTGGATCCAAAGCCGAGAATGTGTTGGGTCGGGTTGATTTTTGCAGCAAACCGACACGACCCGTTTTCTTTATAGGATTTTTGGAGATACAATGTACAAGTAATAGGGGTGGCTTGGCAATTTGAAACCAAACATATTGATGTCATTTTTGAAACATGGTTTGATTTGAAATTGGATAA

mRNA sequence

TACCCATCAGAGTCCCCTTTTCGTAAAGTTCAGTAAAACCCATCATCGTTGCTTGTAATTTCTTCACCTACCTTGTAAAAATCTACTGAATCAGGGCCCCATTATTTGAATCCCTCCCTTTTTTGTTTCAACTTTCTCTGGGTATGTTTCTAAGGCTGAGAGGAAGTAAGAACAGTGAATGTTTTGATTCTTACTCATTTAGGGCTCTTTGTGCTACTGGATTTGGCCATTTTGATCTTGTTTGTGGCTATGGATTATGAGTTTCTGGGTTTTTCATCAATCAAGGGGTTGAAGAACCAGGCACTGTTCTTTATCACTTCTGGCTGTTCTTGAATGAAAGAGTAGTAAAAGCACATGGGTTTCATTTTCCTTTGCTTTTTAGTGCCTAGAATCTATGCTCTGAAGGGATTGAAGCTTTTCATCTCAACTTTGCATCTTTTTCTCTTTTCATTGATGCCAAATCTTATCTCACAATGAAGTGTTAGCTGCTTGTGAAATGGTTTTACTATTTGAGTAGCTGAAGAACATAGAGCCTAAGGAGATTTTCCCCATTTCCTAAAGCGTTCTTGACATGGATTTTAGATCATAGCAGAGCTTCATAGATTTGTCTGTTCTTGGGGAATAAGCACAAGGCTAGATGGCGGTGGACGAAAAGAGTAAGAGCTCGATTTGGAGTCGAGATCAGGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTGCTGATCGTTGGGAGAAGATTGCGGCGGACATAGCTGGAAGAACAGTAGAAGAGATAAAAGATCATTACAAGGTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTGGTTCCTCTGCCGTGCTATAGCTTTTGTTCTGATGGGTCTCCAAGTGATGATACTAAAAAGAAGGGAGACCACCATGGGGTTGATAATAGTGAACCTTGTATGGGAAATAAAGCTCCAAGATCTGACCAAGAGCGTAGAAAGGGGACTGCATGGACAGAAGATGAGCACAGACTATTTCTTCTGGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATTTCCCGGAACTTTGTGGTGACAAGAACACCGACTCAAGTGGCAAGCCATGCTCAAAAGTACTTCATTCGTCTGAACTCAATGAACAAAGACAGAAGGCGGTCGAGCATCCATGATATCACCCGTGTCGATAATGGAGATGTATCTGCACATCAAGGACCAATTACTGGTGAAGCAAATAGTTCTGGAGGAGGAGGAGGAAGCTCTACCAGCAACTCCTCCAAACAGCCATCTCAACCACCTACTGGATCATTCGATGTCGGGATATACGGCGCTCTAGCCGTCGAGCAGCCCGTAGGAGGTCCCTTTGGTCCGGCAGTTGCCACTCCGGTTAGTACTCCTCCAGCAGCACATACGACATATGCAGTCAGATCCCGTGTAGTGAACTCACTGGTTCGTAGACCACCAGTGAATATGAGCTCCATAACATATTAAAGGTAATGTTCTGTTCTGTTCTGTTGTGGCATAGCTTATCTGAAGAGTGGTCTTATGTTCTTGTTTGGTCTCACAGGACATTTACTTGTTAGTACTTGTTTCACGAATGAATGATGTTTGGGATTCAATGTTCTTTTCCAAGCCATTGGATTAAGGTTGTTTCATTTTAGTTCAGTAATTCATAGGAGTGTTGAGAACCCAATCGAATCGAGTTGGATCCAAAGCCGAGAATGTGTTGGGTCGGGTTGATTTTTGCAGCAAACCGACACGACCCGTTTTCTTTATAGGATTTTTGGAGATACAATGTACAAGTAATAGGGGTGGCTTGGCAATTTGAAACCAAACATATTGATGTCATTTTTGAAACATGGTTTGATTTGAAATTGGATAA

Coding sequence (CDS)

ATGGCGGTGGACGAAAAGAGTAAGAGCTCGATTTGGAGTCGAGATCAGGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTGCTGATCGTTGGGAGAAGATTGCGGCGGACATAGCTGGAAGAACAGTAGAAGAGATAAAAGATCATTACAAGGTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTGGTTCCTCTGCCGTGCTATAGCTTTTGTTCTGATGGGTCTCCAAGTGATGATACTAAAAAGAAGGGAGACCACCATGGGGTTGATAATAGTGAACCTTGTATGGGAAATAAAGCTCCAAGATCTGACCAAGAGCGTAGAAAGGGGACTGCATGGACAGAAGATGAGCACAGACTATTTCTTCTGGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATTTCCCGGAACTTTGTGGTGACAAGAACACCGACTCAAGTGGCAAGCCATGCTCAAAAGTACTTCATTCGTCTGAACTCAATGAACAAAGACAGAAGGCGGTCGAGCATCCATGATATCACCCGTGTCGATAATGGAGATGTATCTGCACATCAAGGACCAATTACTGGTGAAGCAAATAGTTCTGGAGGAGGAGGAGGAAGCTCTACCAGCAACTCCTCCAAACAGCCATCTCAACCACCTACTGGATCATTCGATGTCGGGATATACGGCGCTCTAGCCGTCGAGCAGCCCGTAGGAGGTCCCTTTGGTCCGGCAGTTGCCACTCCGGTTAGTACTCCTCCAGCAGCACATACGACATATGCAGTCAGATCCCGTGTAGTGAACTCACTGGTTCGTAGACCACCAGTGAATATGAGCTCCATAACATATTAA

Homology

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BLAST of CmoCh04G013410 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-47
Identity = 99/192 (51.56%), Postives = 132/192 (68.75%), Query Frame = 1


Query: 3   VDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDDVN 62
           ++E   ++ W+  ++KAFENALA + E+  +RWE++A  + G+TV ++   YK L DDV+
Sbjct: 17  LEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVS 76

Query: 63  QIESGLVPLPCYSFCSDGSPSDDTKKKGDHHGVDNSEPCMGNKAPRS------DQERRKG 122
            IE+G VP+P YS     + S  T + G  HG D  +   G    +S      +QER+KG
Sbjct: 77  SIEAGFVPVPGYS-----TSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKG 136

Query: 123 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 182
             WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  KD+RR+
Sbjct: 137 VPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRA 196

Query: 183 SIHDITRVDNGD 189
           SIHDIT V+  D
Sbjct: 197 SIHDITTVNLSD 203

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BLAST of CmoCh04G013410 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 61/127 (48.03%), Postives = 90/127 (70.87%), Query Frame = 1


Query: 56  VLVDDVNQIESGLVPLPCYSFCSDGSPSDDTKKKGDHHGVDNSEPCMGNKAPRSDQERRK 115
           V ++D++Q E      P  +  ++G  ++++ K     G  +++  + +++  S +ER++
Sbjct: 40  VSLNDLSQYEH-----PNANNNNNGGDNNESSKVAQDEGYASADDAVQHQS-NSGRERKR 99

Query: 116 GTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 175
           G  WTE+EH+LFLLGL K GKGDWR ISRNFV TRTPTQVASHAQKYF+R +++N+ RRR
Sbjct: 100 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRR 159

Query: 176 SSIHDIT 183
           SS+ DIT
Sbjct: 160 SSLFDIT 160

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BLAST of CmoCh04G013410 vs. Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1


Query: 9  SSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDDVNQIESGL 68
          S  W+  Q+KAFE ALATY +D  +RW+ +A  + G+T EE+K HY++LV D+N IE+G 
Sbjct: 11 SGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGH 70

Query: 69 VPLPCY---SFCSDGSPSDDTKK 89
          VP P Y     C++G  S + K+
Sbjct: 71 VPFPNYRTSGGCTNGRLSQEEKR 93

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BLAST of CmoCh04G013410 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.3e-14
Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 1


Query: 1  MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
          MA + +S  S W+  Q+K FE ALA Y +D  DRW  +A  + G+TVEE+K HY +LV+D
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VNQIESGLVPLPCYSFCSDGSPS---DDTKK 89
          +  IE+G VPLP Y      S S    DT+K
Sbjct: 61 LINIETGRVPLPNYKTFESNSRSINDFDTRK 91

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BLAST of CmoCh04G013410 vs. Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.6e-14
Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 1


Query: 1  MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
          MA +  S S+ W+R ++K FE ALATY +D  DRW  +A  + G++ EE++ HY++L+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VNQIESGLVPLPCY 75
          VN IESG  P P Y
Sbjct: 61 VNDIESGRYPHPNY 74

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BLAST of CmoCh04G013410 vs. TrEMBL
Match: A0A0A0KV25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579040 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 3.4e-119
Identity = 226/291 (77.66%), Postives = 249/291 (85.57%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VD++SKSSIWSR+QDKAFENALATYPEDA+DRWEKIA D+ G+T+EE+KDHY++LVDD
Sbjct: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPSDDTKK----KGDHHGVDNSEPCMGNKAPRSDQERRKG 120
           VNQIESG +PLP YSF SDGSPS  +++    KGD+HG+DNSE   G+KAPRSDQERRKG
Sbjct: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGALAV 240
           SIHDIT VDNGDVSA QGPITGEANS GGGGG ST+ S+KQP QPP GSF VGIYGA  V
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGGGGGGSTNKSTKQPPQPPIGSFGVGIYGAPTV 240

Query: 241 EQPVGGPFGPAVATP--VSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            QPVGGPF  AV TP  V+TPP AH  Y+     V+SL  RPPVNMS ITY
Sbjct: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYS-----VSSLATRPPVNMSPITY 286

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BLAST of CmoCh04G013410 vs. TrEMBL
Match: V4VEK0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.0e-98
Identity = 195/291 (67.01%), Postives = 225/291 (77.32%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VDE   SS+W+++QDKAFENAL +YPEDA+DRWEKIAAD+ G+++EEIK HY++LVDD
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPSD------DTKKKGDHHGVDNSEPCMGNKAPRSDQERR 120
           VN+IESG VPLP Y+  SDGS S          KKG H+G  NSE   GNK+ RSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSES-NGNKSSRSDQERR 120

Query: 121 KGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180
           KG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGAL 240
           RSSIHDIT V+NGD+SA QGPITG+ N SGGGG  S+  SSKQP Q   G   VG+YGA 
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGG--SSGKSSKQPPQHSAGPPGVGMYGAP 240

Query: 241 AVEQPVGGPFGPAVATPVSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            + QP+GGP   AV TPV+ P  AH  Y VR+ V  ++V   P+N+S + Y
Sbjct: 241 TMGQPIGGPLVSAVGTPVNLPAPAHMAYGVRATVPGTVVPGAPMNVSPMPY 288

[Close]

BLAST of CmoCh04G013410 vs. TrEMBL
Match: A0A067G2J5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.6e-98
Identity = 195/291 (67.01%), Postives = 225/291 (77.32%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VDE   SS+W+++QDKAFENAL +YPEDA+DRWEKIAAD+ G+++EEIK HY++LVDD
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPSD------DTKKKGDHHGVDNSEPCMGNKAPRSDQERR 120
           VN+IESG VPLP Y+  SDGS S          KKG H+G  NSE   GNK+ RSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSES-NGNKSSRSDQERR 120

Query: 121 KGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180
           KG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGAL 240
           RSSIHDIT V+NGD+SA QGPITG+ N SGGGG  S+  SSKQP Q   G   VG+YGA 
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGG--SSGKSSKQPPQHSAGPPGVGMYGAP 240

Query: 241 AVEQPVGGPFGPAVATPVSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            + QP+GGP   AV TPV+ P  AH  Y VR+ V  ++V   P+N+S + Y
Sbjct: 241 TMGQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPY 288

[Close]

BLAST of CmoCh04G013410 vs. TrEMBL
Match: B9RGH4_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1454070 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 4.4e-98
Identity = 193/289 (66.78%), Postives = 221/289 (76.47%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VDE   SS+W+R+QDKAFE+ALATYPED  DRWEKIAAD+ G+T EEIK HY++LV+D
Sbjct: 1   MTVDEADCSSVWTREQDKAFEDALATYPEDDLDRWEKIAADVPGKTSEEIKFHYELLVED 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPS----DDTKKKGDHHGVDNSEPCMGNKAPRSDQERRKG 120
           VNQIE+G VPLP YS  S+GS      + T KKG H G  N+EP  GNKA RSDQERRKG
Sbjct: 61  VNQIEAGCVPLPNYS-SSEGSTGHAGDEGTSKKGSHLGHHNNEPAHGNKASRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGALAV 240
           SIHDIT V NGD+SA QGPITG+ N S GGG  S   ++K P Q P GS  VG+YG+  +
Sbjct: 181 SIHDITSVGNGDISAPQGPITGQTNGSAGGG--SAGKATKHPPQHPAGSPGVGVYGSPTI 240

Query: 241 EQPVGGPFGPAVATPVSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            QP+GGP   AV TPV+ P  AH  Y +R+ V  ++V   P+NM  + Y
Sbjct: 241 GQPIGGPLVSAVGTPVNLPAPAHMAYGIRAPVPGTVVPGAPMNMGPMAY 286

[Close]

BLAST of CmoCh04G013410 vs. TrEMBL
Match: A0A068VFI4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00007401001 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.7e-97
Identity = 195/289 (67.47%), Postives = 221/289 (76.47%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M  DE S S++WSR+QDKAFENALATYPED+ADRWEKIAAD+ G+++EEIK HY++LVDD
Sbjct: 1   MTADE-STSAVWSREQDKAFENALATYPEDSADRWEKIAADVPGKSLEEIKHHYEILVDD 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPS----DDTKKKGDHHGVDNSEPCMGNKAPRSDQERRKG 120
           VN+IESG VPLP YS C DGS S    + T KK  + G  +SE   G KA RSDQERRKG
Sbjct: 61  VNRIESGCVPLPSYSSCLDGSTSQAGDEGTGKKSGNLGHFSSESNHGGKASRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGL+KYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGALAV 240
           SIHDIT V+ GDVS  QGPITG+ N     G S+ SN  K PSQ PT +  VG+YG   +
Sbjct: 181 SIHDITSVNTGDVSVPQGPITGQTNGPAASGSSAKSN--KPPSQAPTAAPGVGMYGTTTI 240

Query: 241 EQPVGGPFGPAVATPVSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            QPVGGP   AV TPV+ PPAAH  Y VR+ V  ++V   PV M  +TY
Sbjct: 241 GQPVGGPLVSAVGTPVNLPPAAHMAYGVRAPVPGTMVPGAPVAMGPVTY 286

[Close]

BLAST of CmoCh04G013410 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 275.0 bits (702), Expect = 5.1e-74
Identity = 163/306 (53.27%), Postives = 200/306 (65.36%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M V+E S  S+WSR+ D AFE ALA   +++ +RWEKIAAD+ G++VE+IK+HY++LV+D
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 61  VNQIESGLVPLPCYSFC--SDGSPSDD---TKKKGDHHGVDNSEPCMGNKAPRSDQERRK 120
           V +IESG VPLP Y     S+G   D+   +KK G+ H  ++++        +SDQERRK
Sbjct: 61  VTRIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKS----KSDQERRK 120

Query: 121 GTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180
           G AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR
Sbjct: 121 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRR 180

Query: 181 SSIHDITRVDNGDVSAHQGPITGEANS---------------SGGGGGSSTSNSSKQPSQ 240
           SSIHDIT V N DVS  QGPITG+ NS               +GGG  S+    S+ P  
Sbjct: 181 SSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQAPPG 240

Query: 241 PPTGSFDVGIYGALAVEQPVGGPFGPAVATPVSTPPAAHTTYAVRSR-VVNSLVRRPPVN 286
           PP       +YG  A+ Q       PAV TPV+ P   H  Y V +  V  S+V    +N
Sbjct: 241 PP-------MYGTPAIGQ-------PAVGTPVNLPAPPHMAYGVHAAPVPGSVVPGAAMN 288

[Close]

BLAST of CmoCh04G013410 vs. TAIR10
Match: AT1G49010.1 (AT1G49010.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 208.8 bits (530), Expect = 4.5e-54
Identity = 130/291 (44.67%), Postives = 169/291 (58.08%), Query Frame = 1


Query: 6   KSKSSIWSRDQDKAFENALATY---PEDAADRWEKIAADIAGRTVEEIKDHYKVLVDDVN 65
           +S  + WSR+++KAFENA+A +    E   D+W K+++ +  + +EE+K HY++L++DV 
Sbjct: 2   ESVVATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVK 61

Query: 66  QIESGLVPLPCY----------------SFCSDGSPSDDTKKKGDHHGVDNSEPCMGNKA 125
            IE+G VPLP Y                S  +  S S  + +K  + G        G ++
Sbjct: 62  AIENGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRS 121

Query: 126 --PRSDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 185
              R++QERRKG  WTE+EHRLFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFI
Sbjct: 122 GGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 181

Query: 186 RLNSMNKDRRRSSIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQP--- 245
           RLNSMN+DRRRSSIHDIT V+N      Q P          GGG        +P+QP   
Sbjct: 182 RLNSMNRDRRRSSIHDITTVNN------QAPAV-------TGGGQQPQVVKHRPAQPQPQ 241

Query: 246 ---------PTGSFDVGIYGALAVEQPVGGP---FGPAVATPVSTPPAAHT 261
                    P     +G+YG   V QP+  P    G AV TPV  PP   T
Sbjct: 242 PQPQPQQHHPPTMAGLGMYGGAPVGQPIIAPPDHMGSAVGTPVMLPPPMGT 279

[Close]

BLAST of CmoCh04G013410 vs. TAIR10
Match: AT5G04760.1 (AT5G04760.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 178.7 bits (452), Expect = 5.0e-45
Identity = 95/181 (52.49%), Postives = 123/181 (67.96%), Query Frame = 1


Query: 9   SSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDDVNQIESGL 68
           SS W+R +DK FE AL  +PE + +RWE+IA D   ++  E+++HY+VLV DV +I+SG 
Sbjct: 3   SSQWTRSEDKMFEQALVLFPEGSPNRWERIA-DQLHKSAGEVREHYEVLVHDVFEIDSGR 62

Query: 69  VPLPCY----SFCSDGSPSDDTKKKGDHHGVDNSEPCMGNKAPRSDQERRKGTAWTEDEH 128
           V +P Y    +  + G  S      G  HG               + ER++GT WTE+EH
Sbjct: 63  VDVPDYMDDSAAAAAGWDSAGQISFGSKHG---------------ESERKRGTPWTENEH 122

Query: 129 RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITRV 186
           +LFL+GL +YGKGDWRSISRN VVTRTPTQVASHAQKYF+R NS+ K+R+RSSIHDIT V
Sbjct: 123 KLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTV 167

[Close]

BLAST of CmoCh04G013410 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 178.3 bits (451), Expect = 6.6e-45
Identity = 98/189 (51.85%), Postives = 128/189 (67.72%), Query Frame = 1


Query: 3   VDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDDVN 62
           V    + + W+  ++KAFENALA Y ++  DRW+K+AA I G+TV ++   Y  L  DV+
Sbjct: 25  VAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVS 84

Query: 63  QIESGLVPLPCYSFCSDGSPSDDTKKKGDHHGVDNSEP----C-MGNKAPRSDQ-ERRKG 122
            IE+GL+P+P Y      SP       G   G +  +P    C   ++A RS + ER+KG
Sbjct: 85  SIEAGLIPVPGYIT----SPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKG 144

Query: 123 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 182
             WTE+EH+LFL+GL KYGKGDWR+ISRNFV+TRTPTQVASHAQKYFIR  S  KD+RR+
Sbjct: 145 VPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRA 204

Query: 183 SIHDITRVD 186
           SIHDIT V+
Sbjct: 205 SIHDITTVN 209

[Close]

BLAST of CmoCh04G013410 vs. TAIR10
Match: AT5G05790.1 (AT5G05790.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 172.6 bits (436), Expect = 3.6e-43
Identity = 95/185 (51.35%), Postives = 121/185 (65.41%), Query Frame = 1


Query: 8   KSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDDVNQIESG 67
           +SS W+++++K FE ALA Y +D  DRW K+AA I G+T+ ++   Y  L +D+  IE+G
Sbjct: 27  QSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAG 86

Query: 68  LVPLPCY------SFCSDGSPSD-DTKKKGDHHGVDNSEPCMGNKAPRSDQERRKGTAWT 127
           LVP+P Y       F    SP D D  +K            + N A   DQ+RRKG  WT
Sbjct: 87  LVPIPGYRSVTPCGFDQVVSPRDFDAYRK------------LPNGARGFDQDRRKGVPWT 146

Query: 128 EDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHD 186
           E+EHR FLLGL KYGKGDWR+ISRNFV ++TPTQVASHAQKY+ R  S  KD+RR SIHD
Sbjct: 147 EEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHD 199

[Close]

BLAST of CmoCh04G013410 vs. NCBI nr
Match: gi|449458740|ref|XP_004147105.1| (PREDICTED: transcription factor DIVARICATA [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 4.9e-119
Identity = 226/291 (77.66%), Postives = 249/291 (85.57%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VD++SKSSIWSR+QDKAFENALATYPEDA+DRWEKIA D+ G+T+EE+KDHY++LVDD
Sbjct: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPSDDTKK----KGDHHGVDNSEPCMGNKAPRSDQERRKG 120
           VNQIESG +PLP YSF SDGSPS  +++    KGD+HG+DNSE   G+KAPRSDQERRKG
Sbjct: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGALAV 240
           SIHDIT VDNGDVSA QGPITGEANS GGGGG ST+ S+KQP QPP GSF VGIYGA  V
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGGGGGGSTNKSTKQPPQPPIGSFGVGIYGAPTV 240

Query: 241 EQPVGGPFGPAVATP--VSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            QPVGGPF  AV TP  V+TPP AH  Y+     V+SL  RPPVNMS ITY
Sbjct: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYS-----VSSLATRPPVNMSPITY 286

[Close]

BLAST of CmoCh04G013410 vs. NCBI nr
Match: gi|659090216|ref|XP_008445896.1| (PREDICTED: transcription factor DIVARICATA [Cucumis melo])

HSP 1 Score: 425.6 bits (1093), Expect = 6.7e-116
Identity = 226/292 (77.40%), Postives = 246/292 (84.25%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VDE+ KSSIWSR+QDKAFENALATYPEDA+DRWEKIA D+ G+T++EIKDHY++LVDD
Sbjct: 1   MTVDEERKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLKEIKDHYELLVDD 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPS----DDTKKKGDHHGVDNSEPCMGNKAPRSDQERRKG 120
           VNQIESG VPLP YSF SDGSPS    + + KKGD+HG+DNSE   G+KAPRSDQERRKG
Sbjct: 61  VNQIESGFVPLPSYSFSSDGSPSHASEEGSGKKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITRVDNGDVSAHQGPITGEANSSGG-GGGSSTSNSSKQPSQPPTGSFDVGIYGALA 240
           SIHDIT VDNGDVSA QGPITGEANS GG GGG ST+ S+KQP QPP GSF VGIYGA  
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGGVGGGGSTNKSTKQPPQPPIGSFGVGIYGAPT 240

Query: 241 VEQPVGGPFGPAVATP--VSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
           V QPVGGPF  AV TP  V+TP  AH  Y+     V+SL  RP VNMS ITY
Sbjct: 241 VGQPVGGPFVSAVGTPVAVNTPSPAHMPYS-----VSSLATRPSVNMSPITY 287

[Close]

BLAST of CmoCh04G013410 vs. NCBI nr
Match: gi|1009138875|ref|XP_015886818.1| (PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba])

HSP 1 Score: 368.2 bits (944), Expect = 1.3e-98
Identity = 193/289 (66.78%), Postives = 222/289 (76.82%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VDE+  SS+W+R+QDKAFENALAT+PEDA+D WEKIAAD+ G+T+EE+K HY++L +D
Sbjct: 1   MTVDEEGSSSLWTREQDKAFENALATHPEDASDWWEKIAADVPGKTLEEVKHHYELLAED 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPS----DDTKKKGDHHGVDNSEPCMGNKAPRSDQERRKG 120
           V QIESG VPLPCY+  S+GS S    + T KKG H G  +SE   G+K  RSDQERRKG
Sbjct: 61  VKQIESGCVPLPCYNSSSEGSTSHAGDEGTGKKGGHTGNYSSESNHGSKTSRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGALAV 240
           SIHDIT V N D+S  QGPITG+AN S GG   S S S+KQP QPP G   VG+YGA  +
Sbjct: 181 SIHDITSVGNTDISGAQGPITGQANGSAGG---SASKSTKQPPQPPAGPPGVGMYGAPTI 240

Query: 241 EQPVGGPFGPAVATPVSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            QPVGGP   AV TPV+ P A H  Y VR+ V  ++V   P+NM  + Y
Sbjct: 241 GQPVGGPLVSAVGTPVNLPSAPHIAYGVRAPVAGAMVPGAPMNMGPMPY 286

[Close]

BLAST of CmoCh04G013410 vs. NCBI nr
Match: gi|567890255|ref|XP_006437648.1| (hypothetical protein CICLE_v10032259mg [Citrus clementina])

HSP 1 Score: 367.1 bits (941), Expect = 2.8e-98
Identity = 195/291 (67.01%), Postives = 225/291 (77.32%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VDE   SS+W+++QDKAFENAL +YPEDA+DRWEKIAAD+ G+++EEIK HY++LVDD
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPSD------DTKKKGDHHGVDNSEPCMGNKAPRSDQERR 120
           VN+IESG VPLP Y+  SDGS S          KKG H+G  NSE   GNK+ RSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSES-NGNKSSRSDQERR 120

Query: 121 KGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180
           KG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGAL 240
           RSSIHDIT V+NGD+SA QGPITG+ N SGGGG  S+  SSKQP Q   G   VG+YGA 
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGG--SSGKSSKQPPQHSAGPPGVGMYGAP 240

Query: 241 AVEQPVGGPFGPAVATPVSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            + QP+GGP   AV TPV+ P  AH  Y VR+ V  ++V   P+N+S + Y
Sbjct: 241 TMGQPIGGPLVSAVGTPVNLPAPAHMAYGVRATVPGTVVPGAPMNVSPMPY 288

[Close]

BLAST of CmoCh04G013410 vs. NCBI nr
Match: gi|641851056|gb|KDO69927.1| (hypothetical protein CISIN_1g022439mg [Citrus sinensis])

HSP 1 Score: 366.7 bits (940), Expect = 3.7e-98
Identity = 195/291 (67.01%), Postives = 225/291 (77.32%), Query Frame = 1


Query: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60
           M VDE   SS+W+++QDKAFENAL +YPEDA+DRWEKIAAD+ G+++EEIK HY++LVDD
Sbjct: 1   MTVDEVGSSSVWTKEQDKAFENALVSYPEDASDRWEKIAADVPGKSLEEIKQHYELLVDD 60

Query: 61  VNQIESGLVPLPCYSFCSDGSPSD------DTKKKGDHHGVDNSEPCMGNKAPRSDQERR 120
           VN+IESG VPLP Y+  SDGS S          KKG H+G  NSE   GNK+ RSDQERR
Sbjct: 61  VNRIESGCVPLPSYNSSSDGSMSHAGDEGTSNGKKGGHYGHFNSES-NGNKSSRSDQERR 120

Query: 121 KGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180
           KG AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR
Sbjct: 121 KGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR 180

Query: 181 RSSIHDITRVDNGDVSAHQGPITGEANSSGGGGGSSTSNSSKQPSQPPTGSFDVGIYGAL 240
           RSSIHDIT V+NGD+SA QGPITG+ N SGGGG  S+  SSKQP Q   G   VG+YGA 
Sbjct: 181 RSSIHDITSVNNGDISAPQGPITGQTNGSGGGG--SSGKSSKQPPQHSAGPPGVGMYGAP 240

Query: 241 AVEQPVGGPFGPAVATPVSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 286
            + QP+GGP   AV TPV+ P  AH  Y VR+ V  ++V   P+N+S + Y
Sbjct: 241 TMGQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNVSPMPY 288

The following BLAST results are available for this feature:

BLAST of CmoCh04G013410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DIV_ANTMA	1.0e-47	51.56	Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1	[more]
MY1R1_SOLTU	1.1e-25	48.03	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	[more]
RADL1_ARATH	1.5e-14	45.78	Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1	[more]
RADL6_ARATH	3.3e-14	46.15	Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1	[more]
RADL3_ARATH	5.6e-14	47.30	Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1	[more]

BLAST of CmoCh04G013410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV25_CUCSA	3.4e-119	77.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579040 PE=4 SV=1	[more]
V4VEK0_9ROSI	2.0e-98	67.01	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032259mg PE=4 SV=1	[more]
A0A067G2J5_CITSI	2.6e-98	67.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022439mg PE=4 SV=1	[more]
B9RGH4_RICCO	4.4e-98	66.78	DNA binding protein, putative OS=Ricinus communis GN=RCOM_1454070 PE=4 SV=1	[more]
A0A068VFI4_COFCA	1.7e-97	67.47	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00007401001 PE=4 SV=1	[more]

BLAST of CmoCh04G013410 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08520.1	5.1e-74	53.27	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	4.5e-54	44.67	Duplicated homeodomain-like superfamily protein	[more]
AT5G04760.1	5.0e-45	52.49	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	6.6e-45	51.85	Homeodomain-like transcriptional regulator	[more]
AT5G05790.1	3.6e-43	51.35	Duplicated homeodomain-like superfamily protein	[more]

BLAST of CmoCh04G013410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458740\|ref\|XP_004147105.1\|	4.9e-119	77.66	PREDICTED: transcription factor DIVARICATA [Cucumis sativus]	[more]
gi\|659090216\|ref\|XP_008445896.1\|	6.7e-116	77.40	PREDICTED: transcription factor DIVARICATA [Cucumis melo]	[more]
gi\|1009138875\|ref\|XP_015886818.1\|	1.3e-98	66.78	PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba]	[more]
gi\|567890255\|ref\|XP_006437648.1\|	2.8e-98	67.01	hypothetical protein CICLE_v10032259mg [Citrus clementina]	[more]
gi\|641851056\|gb\|KDO69927.1\|	3.7e-98	67.01	hypothetical protein CISIN_1g022439mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017884	SANT_dom
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G013410.1	CmoCh04G013410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..56 score: 2.4E-7coord: 118..162 score: 1.5
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 115..165 score: 1.9E-11coord: 8..60 score: 4.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 116..165 score: 4.1
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 115..161 score: 5.7E-11coord: 5..59 score: 1.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 113..168 score: 1.73E-16coord: 10..66 score: 8.97
IPR017884	SANT domain	PROFILE	PS51293	SANT	coord: 7..62 score:
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 111..167 score: 18
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 227..285 score: 8.2E-131coord: 4..204 score: 8.2E
None	No IPR available	PANTHER	PTHR24078:SF279	DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN	coord: 227..285 score: 8.2E-131coord: 4..204 score: 8.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G013410	Cucsa.280970	Cucumber (Gy14) v1	cgycmoB0774
CmoCh04G013410	CmaCh04G012690	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G013410	CmaCh04G022380	Cucurbita maxima (Rimu)	cmacmoB744
CmoCh04G013410	Cla020042	Watermelon (97103) v1	cmowmB719
CmoCh04G013410	Csa5G579040	Cucumber (Chinese Long) v2	cmocuB717
CmoCh04G013410	MELO3C005072	Melon (DHL92) v3.5.1	cmomeB623
CmoCh04G013410	MELO3C011759	Melon (DHL92) v3.5.1	cmomeB644
CmoCh04G013410	ClCG02G014200	Watermelon (Charleston Gray)	cmowcgB643
CmoCh04G013410	CSPI05G20320	Wild cucumber (PI 183967)	cmocpiB725
CmoCh04G013410	Lsi04G007800	Bottle gourd (USVL1VR-Ls)	cmolsiB669
CmoCh04G013410	Cp4.1LG01g09980	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G013410	MELO3C005072.2	Melon (DHL92) v3.6.1	cmomedB711
CmoCh04G013410	MELO3C011759.2	Melon (DHL92) v3.6.1	cmomedB734
CmoCh04G013410	CsaV3_5G029080	Cucumber (Chinese Long) v3	cmocucB0849
CmoCh04G013410	Cla97C02G039960	Watermelon (97103) v2	cmowmbB713
CmoCh04G013410	Bhi07G000904	Wax gourd	cmowgoB0905
CmoCh04G013410	CsGy5G019840	Cucumber (Gy14) v2	cgybcmoB628
CmoCh04G013410	Carg02046	Silver-seed gourd	carcmoB1138

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G013410	CmoCh04G023390	Cucurbita moschata (Rifu)	cmocmoB470

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G013410	Wax gourd	cmowgoB0891
CmoCh04G013410	Cucurbita moschata (Rifu)	cmocmoB336
CmoCh04G013410	Cucurbita maxima (Rimu)	cmacmoB420
CmoCh04G013410	Cucurbita pepo (Zucchini)	cmocpeB651
CmoCh04G013410	Silver-seed gourd	carcmoB0987