CsaV3_5G029080 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G029080
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	transcription factor DIVARICATA
Location	chr5 : 24170466 .. 24176354 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATATGAGAAGAATTTGGATTTGGCACTCTCTTATTTTCTGCTATGCAACTGCTTTACAGTTACCCATTTCCCCGCTTCCGTCACCGTTTCCATTTAGTTGGTTTACAAGCAAAGAAATCAAGAGGAACCCTTCAGATTTCAGTTCCTCTGTTCTTCTCTGTTGCTTCTTTCATGGATTTCTTGTTCATATGTTCATAAAGATTTGCAGATTCTGTGTCTTTTTGAGACCGATAAAAGGTTTGCTTGAAGTTTCTGTCTCTCTCAGTTGTCTTATTTACAGTAATTAGTTGTTGGGCATGGGACCTAAGACCCATCAGAGTCCCCCTTTTTGAAAGTTTAGTAAAACCCATCATCGTTGCTTATAATTTCTCCACCTACCTTGTAAAAATCTACTAAATCAGGGCCCCATTTTCAACCCCATCTATGTTATTTTGCATTTGAATCCCTCCCTTGCTTTATTTGAATTCGTCCTACTTTTAGAAATCAACTTGTTTCTTTTTTTTTTTTCCTTCAACTTTTTCTGGGTATGATTCTATGGCTGAGAGGAAGTAGAAAAACAAAAGTGAAAGTTTTGATTCTTACCCATTTAGGGTCTCTTTGTAATTCTGTAACTAGATTTGGCCTTTTTGTTCTTTAATTGTTTGTGGCTGTGGATTATGGTGCTGAAAGTTGTGTTGGGTTGGTAATAATTCCGCTTGGCATTTTCGTGTGTGTTTAGTGTATTGCTTTAACTATCACTATAATTGATATTTGAAAAGTAAGAAGGGAGGACTTTGAGGGTTTTGTCATCAATCAAGGGGTTGAAAAAACCAGGAGCTGTTCTCTATCATTTCTGGCTGTTCTTCATTGAAAGAGTTGTTAGTGTAGTTTTACTTGGCTCTTCTTTTAATTAGAAAATTGTAAAAGCACATGGGTTTCATTTTTTCTTTTCGTTTTGATACCTAGAATCTATGCTCTGAAGGGATGCTTTTTCATCTCAACTTTGCATCTTTTTCTCTTTCTACTTATTCCAAATCTTACCTCGCAATGAAATGTAAGCTGCTTGTAAAATGGTTTTACTATTTGAGCAGTAGAAGAAGGCAGAGCATAAGGAGGTAGTCGGGTTTTGGCTTTTGCCTGTTGTTGTCTTAGGTTCATAAAAGTTGAAATCATATTGTAGAGATTTGAGTTTTATGGTTTGGACCGTATAAGCCGTTCTTGTCAACTGGAAAGATGATAATTGGGTTTTTCTTTGCTCGTTTGTTTAGTATTGAAATCGTAGACTCTCTTCTACCCTGTAGATTTCTGGATTCATCCTTGTTTGGTATATGCTGTCCTTTTCAGATTTCATCATCAGGAGATGAAATTCTCATTTGAAATGATTCGCCCATTCAATTCTATCTTTTGCTTTCTTTTGAAAATTGATACATTTGCTCTTTTTACTATGGATTTTCAGTTTTTTTTCATGCAGGCAGTCATTCTCTGGCTAACTCTGTTCTTTTTATTCATTGATAGGTTGGCTTCACCTGAATCTAGCTTTTGAGCTATGGAGAAAATTGCTTTTGAAATCTTCACATGTTTTTTCTGAGCTCCATCATTATTATTATAGGTGAAACTGGATTCAACTGAACAGTGTTTTATTTGTCCATTTAAAGCCCTATTTCCTAAAGCATCTCTCTTGCCATGGATTTTAGATCATACAAGACCTTCATAGATTTTCCTGTTCTCTCTTGTGGGAAAATTTGGAGAATAAACACAAGGCTAGATGACAGTGGATAAAGAGAGCAAGAGCTCGATTTGGAGTCGAGAACAAGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTTCAGATCGTTGGGAGAAAATTGCGGTTGACGTACCTGGAAAAACTTTAGAAGAGGTCAAAGATCATTACGAGCTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTCATTCCTCTGCCCTCCTATAGTTTTTCTTCGGATGGGTCTCCAAGTCATGCTAGTGAAGAGGGAAGTGGAAACAAGGGAGACTACCATGGGCTGGACAATAGTGAATCTCGTTTCGGAAGTAAAGCTCCAAGATCAGATCAAGAGCGTAGAAAGGGGACTGCATGGACAGAGGATGAGCACAGGTAAACCTTTGGTCTTTGGGTCTATTTTCTTACTTCTGTTGACAAATAGATTTTCTCAAGTGTCTAAGGTGAGGTAAGTTCAACTTTTTCTTAATTAATAATAAGAATAGTCATTATTTTTCTTTTATATATATAACATGCCCAAATAGGCTGCTAATTCATCTCTCTTCATTATCTTATATGTGTTGATGTTGTCTTGAATCATGTATCACTATTTATTTTTCCCGTTTATTCCTTTCACATGATTTTTGTAAAGTTAGTCAACAATTTTGGTATTTCTGTACGAAGCTCTGAATCGTGGTGCTTTCAATATATGGATGCCAATCCAAACTGATTAATAGCTGTACTCTTAATTTCTTTGTAATCAACAAATGATAACTGTTTCCCTACTTGGATTTTGTTACAGTGCTTACTGACGTCATTATGGGAAGCCATTAAGTCTAATGTTTAGGAGGTCATTTTCTCTTTTATTACCATTAAATAGAGGGGCCATTTCTTGTATGGAACCTCTTATTATTATATTTCAGTTTCGAAGACATGAATTTCTGCTCAATTGTTTTGTTACTTTCTCTGTTCTATTAATGTCAATCCAACTACAGACTTAGTGTTTCCATATTGCTGATAAAATGCATCCAAGTTCCAACTCTCTGTTCTATTGCACTTGTTACAGTTACTGATTGTAATGGAAATGGGGCAGAGATTGGCGAAGTATGACATTTTTGTTCTTTAGTTTGAACTTCTGTTCTTTAGTTTGAACTTCTTGAGGATGAGATACGACAAGTTTGACATTTTTGAATTGGATTGGTTGTACAATTGTGTTCTTGAGTTCTGAGAATGAGATACAATAACTGGTCATGTTCGTTTTAGACACATCACAGTGGGTTTTGATATACCTTCTCAGCACTTCCATTCCTCTTGTTAGACCATCTCCTAATAATATGTTGTACTTCACAATAGTATGTTGTACTTCATAGCTACAGCTCTTAACTCTATCTCCTGATAATATGTTGTACTTCACAAGTTGCATTACTTTTTTAACCGCCAGTTTCTTCATCTTTCACTATCAAAGCGTTGTAAATATTGGACATTTTTCTTTGATTATCAACCCTTTGGTTGTCTAGTGTTCGATTAAAGGAGAGATGGTTGGCATCTCCCCTGACAGGGTCGGGAACAGCCTTCGGGCTTTCCTGTTAACACATACGGTTAAGGCTACCCACCTCTTGAAGGTGGATCTAACCCTTTGGTTGTCTCTTATGTGTGGTGATATCTTAATCGTGAGTTATAAGGGGCCTTATGTGAACACAAACTGAGACTAGTGTAAGATTATAACTGAGTTATTATACTCTTGGATGTGATATTTTAGCAACATTTGGAGTAACTCTTTAATTGACAGTTCCACTTGAGGAAGGAGGGGCTGTCGTAGTTGCTGAATCTTCTACTGTCTCATCATGATACTTCATTAGCTGTAACTACCTTTAGGTATTATTTTGCTTCATCGGAGGCCCTTTCTTTATCTTTCCTTCTTTTGTGGGAGGGGTCTTTGTGGGCTCCTTTTCATATGTCCTTCTAATCTTTTGCTTTTTTTTTCTCTCAATTAAAGTTCGGTTTATCATTTCCTATTGAGGTTGCCTTCAACTTGAAGAATGGATATGCCATATGCAATGTTTTTCTTCCAATTAGAACCTGGAGATAGTTCATGTGTGGTTTCCTGGAGTACAAGATGGCAAAGTAGTGTTGCTCAAGTAAATATCACGTGCAGAACATGTGCTTTGTTGGGATGAGAAGGTGCCTCTCCCATAGTTTGGATGTCTTTTTTTTAGATACAATACAAAGTCATTAGATAGTCTAATTGCTCAGAGTTTTGAGTCAATCACATTGAGATATAATTGTTCAGACTCCCCTGAGAAATTCTGTTGGGTTCATTCATAAATGGAATATAGTTACAGTACAGAAGTACACGACTAAAGCACTCCAAAAGCACTCCAAGCGCAACAAAAAAAAAAAAAAAAAAAAATTCTTAAGGCGGTGATTTATATGCACCCTTATATAAAGATAAAAACATTGCAGTTTCCACAAGATGTTAGGCTTATGCTTGTTCGATATCTTATCATGCGCACTAGTTTCTGTTAGGCCTATGTTTGTTTTTTCACAATTGGTATATTTGCATGGTTTATGATACAATTGTCTTACCATAAATCGCAAATCATAAGATTTATGGGATCATAACAAGGTCTTACATTTAGCATTTGTTACCAAGCAGGCTATTTCTTCTTGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATCTCCCGGAACTTTGTGGTGTCGAGAACACCCACTCAAGTGGCAAGCCATGCACAAAAGTATTTCATTCGTCTAAACTCGATGAACAAAGACAGAAGACGGTCAAGCATCCACGATATTACCAGCGTTGATAATGGAGATGTATCTGCACCACAAGGTCCAATTACTGGTGAAGCAAATAGTTATGGAGGAGGAGGAGGAGGATCTACCAACAAATCAACCAAACAGCCTCCTCAACCACCTATTGGATCGTTTGGTGTCGGGATATACGGTGCTCCAACTGTAGGGCAGCCAGTAGGAGGGCCCTTTGTTTCAGCAGTTGGCACTCCGATTGCGGTTAATACTCCTCCCCCAGCACATATGGCATATTCAGTTAGCTCACTGGCCACTAGACCACCAGTAAACATGAGCCCCATAACATATTAAATCTCTCAAGCATTTGGTGTTAGGTAATGTTTTTTGTTTTGGCATAACTTGTCTGAAGAGTGGTCTTATGCTATTGTTTTGGTCTCATAGAACATTTGCTGAATAATATAACAACTTATATTATGATGCTGCTTTGTTCAATTGGATGCTTTAATTCTTTAATTGAGCTCATAAGGATTACAAAATTTGTGAAGGAAATGGGAAAGAAAGCATTGACTTTCCCTTCTGTCTGTTTGTATTTACTTGTTATGATGAAGTTCAGTTGTTACTAAGAAAAGCACCTTCAGGAATGATGTAGGGGATTCTTAAATCTTTTTAGTTCAATGTTATGTTCTTCTCCAACATATTGGAT

mRNA sequence

ATGACAGTGGATAAAGAGAGCAAGAGCTCGATTTGGAGTCGAGAACAAGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTTCAGATCGTTGGGAGAAAATTGCGGTTGACGTACCTGGAAAAACTTTAGAAGAGGTCAAAGATCATTACGAGCTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTCATTCCTCTGCCCTCCTATAGTTTTTCTTCGGATGGGTCTCCAAGTCATGCTAGTGAAGAGGGAAGTGGAAACAAGGGAGACTACCATGGGCTGGACAATAGTGAATCTCGTTTCGGAAGTAAAGCTCCAAGATCAGATCAAGAGCGTAGAAAGGGGACTGCATGGACAGAGGATGAGCACAGGCTATTTCTTCTTGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATCTCCCGGAACTTTGTGGTGTCGAGAACACCCACTCAAGTGGCAAGCCATGCACAAAAGTATTTCATTCGTCTAAACTCGATGAACAAAGACAGAAGACGGTCAAGCATCCACGATATTACCAGCGTTGATAATGGAGATGTATCTGCACCACAAGGTCCAATTACTGGTGAAGCAAATAGTTATGGAGGAGGAGGAGGAGGATCTACCAACAAATCAACCAAACAGCCTCCTCAACCACCTATTGGATCGTTTGGTGTCGGGATATACGGTGCTCCAACTGTAGGGCAGCCAGTAGGAGGGCCCTTTGTTTCAGCAGTTGGCACTCCGATTGCGGTTAATACTCCTCCCCCAGCACATATGGCATATTCAGTTAGCTCACTGGCCACTAGACCACCAGTAAACATGAGCCCCATAACATATTAA

Coding sequence (CDS)

ATGACAGTGGATAAAGAGAGCAAGAGCTCGATTTGGAGTCGAGAACAAGACAAGGCATTTGAGAATGCTCTAGCCACTTATCCAGAGGATGCTTCAGATCGTTGGGAGAAAATTGCGGTTGACGTACCTGGAAAAACTTTAGAAGAGGTCAAAGATCATTACGAGCTGTTGGTTGATGATGTTAACCAAATTGAATCTGGATTCATTCCTCTGCCCTCCTATAGTTTTTCTTCGGATGGGTCTCCAAGTCATGCTAGTGAAGAGGGAAGTGGAAACAAGGGAGACTACCATGGGCTGGACAATAGTGAATCTCGTTTCGGAAGTAAAGCTCCAAGATCAGATCAAGAGCGTAGAAAGGGGACTGCATGGACAGAGGATGAGCACAGGCTATTTCTTCTTGGTTTGGATAAATATGGAAAAGGAGATTGGCGAAGTATCTCCCGGAACTTTGTGGTGTCGAGAACACCCACTCAAGTGGCAAGCCATGCACAAAAGTATTTCATTCGTCTAAACTCGATGAACAAAGACAGAAGACGGTCAAGCATCCACGATATTACCAGCGTTGATAATGGAGATGTATCTGCACCACAAGGTCCAATTACTGGTGAAGCAAATAGTTATGGAGGAGGAGGAGGAGGATCTACCAACAAATCAACCAAACAGCCTCCTCAACCACCTATTGGATCGTTTGGTGTCGGGATATACGGTGCTCCAACTGTAGGGCAGCCAGTAGGAGGGCCCTTTGTTTCAGCAGTTGGCACTCCGATTGCGGTTAATACTCCTCCCCCAGCACATATGGCATATTCAGTTAGCTCACTGGCCACTAGACCACCAGTAAACATGAGCCCCATAACATATTAA

Protein sequence

MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDDVNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVDNGDVSAPQGPITGEANSYGGGGGGSTNKSTKQPPQPPIGSFGVGIYGAPTVGQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY

Homology

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BLAST of CsaV3_5G029080 vs. NCBI nr
Match: XP_004147105.1 (PREDICTED: transcription factor DIVARICATA [Cucumis sativus] >XP_011655501.1 PREDICTED: transcription factor DIVARICATA [Cucumis sativus] >XP_011655502.1 PREDICTED: transcription factor DIVARICATA [Cucumis sativus] >XP_011655503.1 PREDICTED: transcription factor DIVARICATA [Cucumis sativus] >KGN51566.1 hypothetical protein Csa_5G579040 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 1.2e-145
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD
Sbjct: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG
Sbjct: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240
           SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240

Query: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY 287
           GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY
Sbjct: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY 286

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BLAST of CsaV3_5G029080 vs. NCBI nr
Match: XP_008445896.1 (PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_008445897.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_008445898.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900315.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900316.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900317.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900318.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_016900319.1 PREDICTED: transcription factor DIVARICATA [Cucumis melo])

HSP 1 Score: 502.3 bits (1292), Expect = 1.1e-138
Identity = 275/287 (95.82%), Postives = 280/287 (97.56%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVD+E KSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTL+E+KDHYELLVDD
Sbjct: 1   MTVDEERKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLKEIKDHYELLVDD 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           VNQIESGF+PLPSYSFSSDGSPSHASEEGSG KGDYHGLDNSESRFGSKAPRSDQERRKG
Sbjct: 61  VNQIESGFVPLPSYSFSSDGSPSHASEEGSGKKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYG-XXXXXXXXXXXXXXXXXXIGSFGVGIYGAPT 240
           SIHDITSVDNGDVSAPQGPITGEANSYG XXXXXXXXXXXXXXXXXX GSFGVGIYGAPT
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXXXGSFGVGIYGAPT 240

Query: 241 VGQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY 287
           VGQPVGGPFVSAVGTP+AVNTP PAHM YSVSSLATRP VNMSPITY
Sbjct: 241 VGQPVGGPFVSAVGTPVAVNTPSPAHMPYSVSSLATRPSVNMSPITY 287

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BLAST of CsaV3_5G029080 vs. NCBI nr
Match: XP_022999333.1 (transcription factor SRM1-like [Cucurbita maxima] >XP_022999340.1 transcription factor SRM1-like [Cucurbita maxima] >XP_022999349.1 transcription factor SRM1-like [Cucurbita maxima] >XP_022999356.1 transcription factor SRM1-like [Cucurbita maxima] >XP_022999364.1 transcription factor SRM1-like [Cucurbita maxima] >XP_022999373.1 transcription factor SRM1-like [Cucurbita maxima] >XP_022999381.1 transcription factor SRM1-like [Cucurbita maxima] >XP_022999388.1 transcription factor SRM1-like [Cucurbita maxima] >XP_022999397.1 transcription factor SRM1-like [Cucurbita maxima])

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 230/291 (79.04%), Postives = 252/291 (86.60%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVD++SKSSIWSR+QDKAFENALATYPEDA+DRWEKIA D+ G+TLEE+K+HY++LVDD
Sbjct: 1   MTVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTLEEIKEHYKVLVDD 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           VNQIESG +PLP YSF SDGSPSH +++    KGD+HG+DNSE   G+KAPRSDQERRKG
Sbjct: 61  VNQIESGLVPLPCYSFCSDGSPSHDAKK----KGDHHGVDNSEPCSGNKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNK+RRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKERRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240
           SIHDIT VDNGDVSA QGPITGEA S  XXXXXXXXXXXXXXXXXX GSF VGIYGA  V
Sbjct: 181 SIHDITRVDNGDVSAHQGPITGEAYSXXXXXXXXXXXXXXXXXXXXTGSFDVGIYGALAV 240

Query: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYS-----VSSLATRPPVNMSPITY 287
            QPVGGP   AV TP  V+TPPPAH  Y+     V+SL  RPPVNMS ITY
Sbjct: 241 EQPVGGPLGPAVATP--VSTPPPAHTTYAVRSRVVNSLVPRPPVNMSSITY 285

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BLAST of CsaV3_5G029080 vs. NCBI nr
Match: XP_022956795.1 (transcription factor SRM1-like [Cucurbita moschata] >XP_022956797.1 transcription factor SRM1-like [Cucurbita moschata] >XP_022956798.1 transcription factor SRM1-like [Cucurbita moschata] >XP_022956799.1 transcription factor SRM1-like [Cucurbita moschata] >XP_022956800.1 transcription factor SRM1-like [Cucurbita moschata] >XP_022956801.1 transcription factor SRM1-like [Cucurbita moschata] >XP_022956802.1 transcription factor SRM1-like [Cucurbita moschata] >XP_022956803.1 transcription factor SRM1-like [Cucurbita moschata])

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 229/291 (78.69%), Postives = 249/291 (85.57%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           M VD++SKSSIWSR+QDKAFENALATYPEDA+DRWEKIA D+ G+T+EE+KDHY++LVDD
Sbjct: 1   MAVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           VNQIESG +PLP YSF SDGSPS    + +  KGD+HG+DNSE   G+KAPRSDQERRKG
Sbjct: 61  VNQIESGLVPLPCYSFCSDGSPS----DDTKKKGDHHGVDNSEPCMGNKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240
           SIHDIT VDNGDVSA QGPITGEAN   XXXXXXXXXXXXXXXXXX GSF VGIYGA  V
Sbjct: 181 SIHDITRVDNGDVSAHQGPITGEANXXXXXXXXXXXXXXXXXXXXXTGSFDVGIYGALAV 240

Query: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYS-----VSSLATRPPVNMSPITY 287
            QPVGGPF  AV TP  V+TPP AH  Y+     V+SL  RPPVNMS ITY
Sbjct: 241 EQPVGGPFGPAVATP--VSTPPAAHTTYAVRSRVVNSLVRRPPVNMSSITY 285

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BLAST of CsaV3_5G029080 vs. NCBI nr
Match: XP_023516708.1 (transcription factor SRM1-like [Cucurbita pepo subsp. pepo] >XP_023516714.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo] >XP_023516720.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo] >XP_023516726.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo] >XP_023516731.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo] >XP_023516737.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo] >XP_023516745.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.9 bits (1008), Expect = 9.4e-106
Identity = 229/293 (78.16%), Postives = 249/293 (84.98%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVD++SKSSIWSR+QDKAFENALATYPEDA+DRWEKIA D+ G+T+EE+KDHY++LVDD
Sbjct: 1   MTVDEKSKSSIWSRDQDKAFENALATYPEDAADRWEKIAADIAGRTVEEIKDHYKVLVDD 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           VNQIESG +PLP YSF SDGSPS    + +  KGD+HG+DNSE   G+KAPRSDQERRKG
Sbjct: 61  VNQIESGLVPLPCYSFCSDGSPS----DDTKKKGDHHGVDNSEPCSGNKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEAN--SYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAP 240
           SIHDIT VDNGDVSA QGPITGEAN     XXXXXXXXXXXXXXXXXX GSF VGIY A 
Sbjct: 181 SIHDITRVDNGDVSAHQGPITGEANXXXXXXXXXXXXXXXXXXXXXXXTGSFDVGIYSAL 240

Query: 241 TVGQPVGGPFVSAVGTPIAVNTPPPAHMAYS-----VSSLATRPPVNMSPITY 287
            V QPVGGPF  AV TP  V+TPP AH  Y+     V+SL  RPPVNMS ITY
Sbjct: 241 AVEQPVGGPFGPAVATP--VSTPPAAHTTYAVRSRVVNSLVPRPPVNMSSITY 287

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BLAST of CsaV3_5G029080 vs. TAIR10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 257.7 bits (657), Expect = 8.6e-69
Identity = 134/203 (66.01%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTV++ S  S+WSRE D AFE ALA   +++ +RWEKIA DVPGK++E++K+HYELLV+D
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           V +IESG +PLP+Y  S +GS  HA +                          DQERRKG
Sbjct: 61  VTRIESGCVPLPAYG-SPEGSNGHAGD--XXXXXXXXXXXXXXXXXXXXXXXXDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGE 204
           SIHDITSV N DVS PQGPITG+
Sbjct: 181 SIHDITSVGNADVSTPQGPITGQ 200

[Close]

BLAST of CsaV3_5G029080 vs. TAIR10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47
Identity = 131/271 (48.34%), Postives = 159/271 (58.67%), Query Frame = 0


Query: 6   ESKSSIWSREQDKAFENALATY---PEDASDRWEKIAVDVPGKTLEEVKDHYELLVDDVN 65
           ES  + WSRE++KAFENA+A +    E   D+W K++  VP K LEEVK HY++L++DV 
Sbjct: 2   ESVVATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVK 61

Query: 66  QIESGFIPLPSY--------------SFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGS 125
            IE+G +PLP Y                                                
Sbjct: 62  AIENGQVPLPRYHHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 121

Query: 126 KAPRSDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFI 185
                    RKG  WTE+EHRLFLLGLDK+GKGDWRSISRNFV+SRTPTQVASHAQKYFI
Sbjct: 122 XXXXXXXXXRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 181

Query: 186 RLNSMNKDRRRSSIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIG 245
           RLNSMN+DRRRSSIHDIT+V+N   +   G    +   +   XXXXXXXXXXXXX     
Sbjct: 182 RLNSMNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAXXXXXXXXXXXXXHPPTM 241

Query: 246 SFGVGIYGAPTVGQPVGGP---FVSAVGTPI 257
           + G+G+YG   VGQP+  P     SAVGTP+
Sbjct: 242 A-GLGMYGGAPVGQPIIAPPDHMGSAVGTPV 271

[Close]

BLAST of CsaV3_5G029080 vs. TAIR10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47
Identity = 103/210 (49.05%), Postives = 136/210 (64.76%), Query Frame = 0


Query: 5   KESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDDVNQI 64
           +E++ + W+ E++K FENALA Y +D  DRW ++A  +PGKT+ +V   Y  L +DV+ I
Sbjct: 22  QENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDI 81

Query: 65  ESGFIPLPSY---SFSSD-GSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 124
           E+G IP+P Y   SF+ D G    AS     N   Y+    +  + GS A  ++ ER+KG
Sbjct: 82  EAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYY-FSAAGGKRGSAARTAEHERKKG 141

Query: 125 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 184
             WTE+EHR FL+GL KYGKGDWR+I+RNFV +RTPTQVASHAQKYFIR  +  KD+RRS
Sbjct: 142 VPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRS 201

Query: 185 SIHDITSV-----------DNGDVSAPQGP 200
           SIHDIT+V           DN   +AP  P
Sbjct: 202 SIHDITTVNIPDSPDAAAADNATANAPCSP 230

[Close]

BLAST of CsaV3_5G029080 vs. TAIR10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 6.0e-46
Identity = 97/181 (53.59%), Postives = 129/181 (71.27%), Query Frame = 0


Query: 9   SSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDDVNQIESGF 68
           SS W+R +DK FE AL  +PE + +RWE+IA D   K+  EV++HYE+LV DV +I+SG 
Sbjct: 3   SSQWTRSEDKMFEQALVLFPEGSPNRWERIA-DQLHKSAGEVREHYEVLVHDVFEIDSGR 62

Query: 69  IPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKGTAWTEDEH 128
           + +P Y    D + + A  + +G           +  FGSK    + ER++GT WTE+EH
Sbjct: 63  VDVPDY--MDDSAAAAAGWDSAG-----------QISFGSK--HGESERKRGTPWTENEH 122

Query: 129 RLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 188
           +LFL+GL +YGKGDWRSISRN VV+RTPTQVASHAQKYF+R NS+ K+R+RSSIHDIT+V
Sbjct: 123 KLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTV 167

Query: 189 D 190
           D
Sbjct: 183 D 167

[Close]

BLAST of CsaV3_5G029080 vs. TAIR10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator)

HSP 1 Score: 178.3 bits (451), Expect = 6.6e-45
Identity = 99/188 (52.66%), Postives = 128/188 (68.09%), Query Frame = 0


Query: 3   VDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDDVN 62
           V    + + W+  ++KAFENALA Y ++  DRW+K+A  +PGKT+ +V   Y  L  DV+
Sbjct: 25  VAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVS 84

Query: 63  QIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQ-ERRKGT 122
            IE+G IP+P Y  S   +   A   G G  G   G      R  S+A RS + ER+KG 
Sbjct: 85  SIEAGLIPVPGYITSPPFTLDWAG-GGGGCNGFKPGHQVCNKR--SQAGRSPELERKKGV 144

Query: 123 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRSS 182
            WTE+EH+LFL+GL KYGKGDWR+ISRNFV++RTPTQVASHAQKYFIR  S  KD+RR+S
Sbjct: 145 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRAS 204

Query: 183 IHDITSVD 190
           IHDIT+V+
Sbjct: 205 IHDITTVN 209

[Close]

BLAST of CsaV3_5G029080 vs. Swiss-Prot
Match: sp|Q9FNN6|SRM1_ARATH (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.5e-67
Identity = 134/203 (66.01%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTV++ S  S+WSRE D AFE ALA   +++ +RWEKIA DVPGK++E++K+HYELLV+D
Sbjct: 1   MTVEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVED 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           V +IESG +PLP+Y  S +GS  HA +                          DQERRKG
Sbjct: 61  VTRIESGCVPLPAYG-SPEGSNGHAGD--XXXXXXXXXXXXXXXXXXXXXXXXDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGE 204
           SIHDITSV N DVS PQGPITG+
Sbjct: 181 SIHDITSVGNADVSTPQGPITGQ 200

[Close]

BLAST of CsaV3_5G029080 vs. Swiss-Prot
Match: sp|Q8S9H7|DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.9e-49
Identity = 107/199 (53.77%), Postives = 139/199 (69.85%), Query Frame = 0


Query: 5   KESKSSI-WSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDDVNQ 64
           +ES+S+  W+  ++KAFENALA + E+  +RWE++A  VPGKT+ +V   Y+ L DDV+ 
Sbjct: 18  EESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSS 77

Query: 65  IESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFG------SKAPRSDQER 124
           IE+GF+P+P YS SS        E GSG     HG D  +  +G      S    S+QER
Sbjct: 78  IEAGFVPVPGYSTSS----PFTLEWGSG-----HGFDGFKQSYGTGGRKSSSGRPSEQER 137

Query: 125 RKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDR 184
           +KG  WTE+EH+LFL+GL KYGKGDWR+ISRNFV++RTPTQVASHAQKYFIR  S  KD+
Sbjct: 138 KKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDK 197

Query: 185 RRSSIHDITSVDNGDVSAP 197
           RR+SIHDIT+V+  D   P
Sbjct: 198 RRASIHDITTVNLSDNQTP 207

[Close]

BLAST of CsaV3_5G029080 vs. Swiss-Prot
Match: sp|B8A9B2|MYBS1_ORYSI (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.3e-39
Identity = 132/252 (52.38%), Postives = 150/252 (59.52%), Query Frame = 0


Query: 42  VPG-KTLEEVKDHYELLVDDVNQIESGFIPLPSYS------FSSDGSPSHASEEGSGNKG 101
           VPG ++ EEV+ HYE LV+DV  I++G +PLP Y+                         
Sbjct: 56  VPGARSAEEVRRHYEALVEDVAAIDAGRVPLPRYAGEXXXXXXXXXXXXXXXXXXXXXXX 115

Query: 102 DYHGLDNSESRFGSKAPRSDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSR 161
                                  RKG  WTE+EHRLFLLGLDK+GKGDWRSISRNFV+SR
Sbjct: 116 XXXXXXXXXXXXXXXXXXXXXXXRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISR 175

Query: 162 TPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVDNGD-VSAPQG-PITGE--ANSYGXX 221
           TPTQVASHAQKYFIRLNSMN+DRRRSSIHDITSV  GD V+A QG PITG     +  XX
Sbjct: 176 TPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATGNPAXX 235

Query: 222 XXXXXXXXXXXXXXXXIGSFGVGIYGAPTVGQPVGGPFV-SAVGTPIAVNTPPPAHMAYS 281
           XXXXXXXXXXXXXXXX       +Y A  +G PV G  V +AVGTP+     PP H  Y 
Sbjct: 236 XXXXXXXXXXXXXXXXXXXXXXPMYSAAPMGHPVAGHMVPAAVGTPVVF---PPGHAPYV 295

[Close]

BLAST of CsaV3_5G029080 vs. Swiss-Prot
Match: sp|Q8LH59|MYBS1_ORYSJ (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.3e-39
Identity = 132/252 (52.38%), Postives = 150/252 (59.52%), Query Frame = 0


Query: 42  VPG-KTLEEVKDHYELLVDDVNQIESGFIPLPSYS------FSSDGSPSHASEEGSGNKG 101
           VPG ++ EEV+ HYE LV+DV  I++G +PLP Y+                         
Sbjct: 56  VPGARSAEEVRRHYEALVEDVAAIDAGRVPLPRYAGEXXXXXXXXXXXXXXXXXXXXXXX 115

Query: 102 DYHGLDNSESRFGSKAPRSDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSR 161
                                  RKG  WTE+EHRLFLLGLDK+GKGDWRSISRNFV+SR
Sbjct: 116 XXXXXXXXXXXXXXXXXXXXXXXRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISR 175

Query: 162 TPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVDNGD-VSAPQG-PITGE--ANSYGXX 221
           TPTQVASHAQKYFIRLNSMN+DRRRSSIHDITSV  GD V+A QG PITG     +  XX
Sbjct: 176 TPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATGNPAXX 235

Query: 222 XXXXXXXXXXXXXXXXIGSFGVGIYGAPTVGQPVGGPFV-SAVGTPIAVNTPPPAHMAYS 281
           XXXXXXXXXXXXXXXX       +Y A  +G PV G  V +AVGTP+     PP H  Y 
Sbjct: 236 XXXXXXXXXXXXXXXXXXXXXXPMYSAAPMGHPVAGHMVPAAVGTPVVF---PPGHAPYV 295

[Close]

BLAST of CsaV3_5G029080 vs. Swiss-Prot
Match: sp|Q2V9B0|MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.5e-25
Identity = 52/75 (69.33%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 113 SDQERRKGTAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNS 172
           S +ER++G  WTE+EH+LFLLGL K GKGDWR ISRNFV +RTPTQVASHAQKYF+R ++
Sbjct: 87  SGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSN 146

Query: 173 MNKDRRRSSIHDITS 188
           +N+ RRRSS+ DIT+
Sbjct: 147 LNRRRRRSSLFDITT 161

[Close]

BLAST of CsaV3_5G029080 vs. TrEMBL
Match: tr|A0A0A0KV25|A0A0A0KV25_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G579040 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 8.0e-146
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD
Sbjct: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG
Sbjct: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240
           SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240

Query: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY 287
           GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY
Sbjct: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY 286

[Close]

BLAST of CsaV3_5G029080 vs. TrEMBL
Match: tr|A0A1S4DWF8|A0A1S4DWF8_CUCME (transcription factor DIVARICATA OS=Cucumis melo OX=3656 GN=LOC103488780 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 7.3e-139
Identity = 275/287 (95.82%), Postives = 280/287 (97.56%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVD+E KSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTL+E+KDHYELLVDD
Sbjct: 1   MTVDEERKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLKEIKDHYELLVDD 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           VNQIESGF+PLPSYSFSSDGSPSHASEEGSG KGDYHGLDNSESRFGSKAPRSDQERRKG
Sbjct: 61  VNQIESGFVPLPSYSFSSDGSPSHASEEGSGKKGDYHGLDNSESRFGSKAPRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
           TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYG-XXXXXXXXXXXXXXXXXXIGSFGVGIYGAPT 240
           SIHDITSVDNGDVSAPQGPITGEANSYG XXXXXXXXXXXXXXXXXX GSFGVGIYGAPT
Sbjct: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXXXGSFGVGIYGAPT 240

Query: 241 VGQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLATRPPVNMSPITY 287
           VGQPVGGPFVSAVGTP+AVNTP PAHM YSVSSLATRP VNMSPITY
Sbjct: 241 VGQPVGGPFVSAVGTPVAVNTPSPAHMPYSVSSLATRPSVNMSPITY 287

[Close]

BLAST of CsaV3_5G029080 vs. TrEMBL
Match: tr|A0A1S3VR16|A0A1S3VR16_VIGRR (transcription factor DIVARICATA-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106777663 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 4.0e-105
Identity = 221/291 (75.95%), Postives = 240/291 (82.47%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVD+   SS WSREQDKAFENALAT+PEDASDRWEKIA DVPGKT+EE+K HYELLV+D
Sbjct: 1   MTVDEVDSSSEWSREQDKAFENALATHPEDASDRWEKIAADVPGKTIEEIKQHYELLVED 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           V+QIESG +PLPSY+ SS+GS SHAS+EG+G KG   G  NSES  G+KA RSDQERRKG
Sbjct: 61  VSQIESGCVPLPSYNSSSEGSTSHASDEGAGKKGSGLGNFNSESNHGTKASRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240
           SIHDITSV+NGDV APQGPITG+ N         XXXXXXXXXXXX    GVGIY APT+
Sbjct: 181 SIHDITSVNNGDVLAPQGPITGQTNG------AAXXXXXXXXXXXXXXXXGVGIYAAPTI 240

Query: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSVSSLAT-----RPPVNMSPITY 287
           GQPVGGP VSAVGTP  VN P PAHMAY V +  T       PVN+SP+TY
Sbjct: 241 GQPVGGPLVSAVGTP--VNLPSPAHMAYGVRAPVTGAVVPGAPVNVSPVTY 283

[Close]

BLAST of CsaV3_5G029080 vs. TrEMBL
Match: tr|V7C750|V7C750_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G013600g PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 3.4e-104
Identity = 207/291 (71.13%), Postives = 228/291 (78.35%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVD+   SS WSREQDKAFENALAT+PEDASDRWEKIA DVPGKT+EE+K HYELLV+D
Sbjct: 1   MTVDEVDSSSEWSREQDKAFENALATHPEDASDRWEKIAADVPGKTIEEIKQHYELLVED 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           V+QIESG +PLPSY+ SS+GS SHAS+EG+G KG   G  NSES  G+KA RSDQERRKG
Sbjct: 61  VSQIESGCVPLPSYNSSSEGSTSHASDEGAGKKGSGLGNYNSESNHGTKASRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGL+KYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240
           SIHDITSV+NGDV APQGPITG+ N                      G  GVGIY APT+
Sbjct: 181 SIHDITSVNNGDVLAPQGPITGQTNG---SAANSTAKATKQGTPASTGVPGVGIYAAPTI 240

Query: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSV-----SSLATRPPVNMSPITY 287
           GQPVGGP VSAVGTP  VN P PAHMAY V      ++    PVN+ P+TY
Sbjct: 241 GQPVGGPLVSAVGTP--VNLPSPAHMAYGVRAPVAGAVVPGAPVNVIPVTY 286

[Close]

BLAST of CsaV3_5G029080 vs. TrEMBL
Match: tr|I1ND50|I1ND50_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100797809 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 5.8e-104
Identity = 204/291 (70.10%), Postives = 226/291 (77.66%), Query Frame = 0


Query: 1   MTVDKESKSSIWSREQDKAFENALATYPEDASDRWEKIAVDVPGKTLEEVKDHYELLVDD 60
           MTVD+   SS WSREQDKAFENALAT+PED SDRWEKIA DVPGKT+EE+K HYELLV+D
Sbjct: 1   MTVDEVDSSSEWSREQDKAFENALATHPEDDSDRWEKIAADVPGKTIEEIKQHYELLVED 60

Query: 61  VNQIESGFIPLPSYSFSSDGSPSHASEEGSGNKGDYHGLDNSESRFGSKAPRSDQERRKG 120
           +NQIESG +PLPSY+ SS+GS SHAS+EG+G KG   G  + ES  G+KA RSDQERRKG
Sbjct: 61  INQIESGCVPLPSYNSSSEGSTSHASDEGAGKKGSGPGHYSGESNHGTKASRSDQERRKG 120

Query: 121 TAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKYFIRLNSMNKDRRRS 180
            AWTEDEHRLFLLGLDKYGKGDWRSISRNFVV+RTPTQVASHAQKYFIRLNSMNKDRRRS
Sbjct: 121 IAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRS 180

Query: 181 SIHDITSVDNGDVSAPQGPITGEANSYGXXXXXXXXXXXXXXXXXXIGSFGVGIYGAPTV 240
           SIHDITSV+NGD+SAPQGPITG+ N                      G  GVGIY APT+
Sbjct: 181 SIHDITSVNNGDISAPQGPITGQTNG---SAGNFTAKAAKAATPASTGVPGVGIYAAPTI 240

Query: 241 GQPVGGPFVSAVGTPIAVNTPPPAHMAYSV-----SSLATRPPVNMSPITY 287
           GQP+GGP VSAVGT   VN P PAHMAY V      ++    PVNM P+TY
Sbjct: 241 GQPIGGPLVSAVGT--TVNLPAPAHMAYGVRAPVPGAVVPGAPVNMGPVTY 286

The following BLAST results are available for this feature:

BLAST of CsaV3_5G029080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147105.1	1.2e-145	100.00	PREDICTED: transcription factor DIVARICATA [Cucumis sativus] >XP_011655501.1 PRE...	[more]
XP_008445896.1	1.1e-138	95.82	PREDICTED: transcription factor DIVARICATA [Cucumis melo] >XP_008445897.1 PREDIC...	[more]
XP_022999333.1	1.2e-108	79.04	transcription factor SRM1-like [Cucurbita maxima] >XP_022999340.1 transcription ...	[more]
XP_022956795.1	1.3e-107	78.69	transcription factor SRM1-like [Cucurbita moschata] >XP_022956797.1 transcriptio...	[more]
XP_023516708.1	9.4e-106	78.16	transcription factor SRM1-like [Cucurbita pepo subsp. pepo] >XP_023516714.1 tran...	[more]

BLAST of CsaV3_5G029080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08520.1	8.6e-69	66.01	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	7.1e-47	48.34	Duplicated homeodomain-like superfamily protein	[more]
AT2G38090.1	7.1e-47	49.05	Duplicated homeodomain-like superfamily protein	[more]
AT5G04760.1	6.0e-46	53.59	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	6.6e-45	52.66	Homeodomain-like transcriptional regulator	[more]

BLAST of CsaV3_5G029080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FNN6\|SRM1_ARATH	1.5e-67	66.01	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
sp\|Q8S9H7\|DIV_ANTMA	1.9e-49	53.77	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
sp\|B8A9B2\|MYBS1_ORYSI	2.3e-39	52.38	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
sp\|Q8LH59\|MYBS1_ORYSJ	2.3e-39	52.38	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
sp\|Q2V9B0\|MY1R1_SOLTU	9.5e-25	69.33	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]

BLAST of CsaV3_5G029080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KV25\|A0A0A0KV25_CUCSA	8.0e-146	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G579040 PE=4 SV=1	[more]
tr\|A0A1S4DWF8\|A0A1S4DWF8_CUCME	7.3e-139	95.82	transcription factor DIVARICATA OS=Cucumis melo OX=3656 GN=LOC103488780 PE=4 SV=...	[more]
tr\|A0A1S3VR16\|A0A1S3VR16_VIGRR	4.0e-105	75.95	transcription factor DIVARICATA-like OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
tr\|V7C750\|V7C750_PHAVU	3.4e-104	71.13	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G013600g PE=4 ...	[more]
tr\|I1ND50\|I1ND50_SOYBN	5.8e-104	70.10	Uncharacterized protein OS=Glycine max OX=3847 GN=100797809 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017884	SANT_dom
IPR017930	Myb_dom
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G029080.1	CsaV3_5G029080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 5.7E-9 score: 45.8 coord: 119..169 e-value: 3.3E-11 score: 53.2
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..55 e-value: 2.4E-7 score: 30.7 coord: 122..166 e-value: 6.6E-11 score: 42.1
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 122..167 e-value: 1.89071E-9 score: 51.4222
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..58 e-value: 5.96977E-9 score: 49.8814
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 120..169 e-value: 3.2E-17 score: 60.6
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 121..173 e-value: 5.6E-17 score: 63.6
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 10..58 e-value: 7.7E-21 score: 75.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..225
None	No IPR available	PANTHER	PTHR44191	FAMILY NOT NAMED	coord: 1..271
None	No IPR available	PANTHER	PTHR44191:SF2	DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..271
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 115..171 score: 17.948
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 7..62 score: 8.41
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 10..66
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 117..172

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G029080	CSPI05G20320	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G029080	Cucsa.280970	Cucumber (Gy14) v1	cgycucB428
CsaV3_5G029080	CmaCh04G012690	Cucurbita maxima (Rimu)	cmacucB0863
CsaV3_5G029080	CmoCh04G013410	Cucurbita moschata (Rifu)	cmocucB0849
CsaV3_5G029080	Cp4.1LG01g09980	Cucurbita pepo (Zucchini)	cpecucB0520
CsaV3_5G029080	CsGy5G019840	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G029080	Carg02046	Silver-seed gourd	carcucB0885
CsaV3_5G029080	Cla020042	Watermelon (97103) v1	cucwmB453
CsaV3_5G029080	MELO3C011759	Melon (DHL92) v3.5.1	cucmeB381
CsaV3_5G029080	ClCG02G014200	Watermelon (Charleston Gray)	cucwcgB401
CsaV3_5G029080	Lsi04G007800	Bottle gourd (USVL1VR-Ls)	cuclsiB393
CsaV3_5G029080	MELO3C011759.2	Melon (DHL92) v3.6.1	cucmedB375
CsaV3_5G029080	Cla97C02G039960	Watermelon (97103) v2	cucwmbB382
CsaV3_5G029080	Bhi07G000904	Wax gourd	cucwgoB530

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G029080	Cucumber (Chinese Long) v3	cuccucB197
CsaV3_5G029080	Silver-seed gourd	carcucB0763
CsaV3_5G029080	Silver-seed gourd	carcucB0887
CsaV3_5G029080	Silver-seed gourd	carcucB0883
CsaV3_5G029080	Cucurbita maxima (Rimu)	cmacucB0496
CsaV3_5G029080	Cucurbita moschata (Rifu)	cmocucB0485
CsaV3_5G029080	Cucurbita pepo (Zucchini)	cpecucB0052
CsaV3_5G029080	Bottle gourd (USVL1VR-Ls)	cuclsiB398
CsaV3_5G029080	Melon (DHL92) v3.5.1	cucmeB389
CsaV3_5G029080	Melon (DHL92) v3.6.1	cucmedB383
CsaV3_5G029080	Watermelon (97103) v2	cucwmbB402
CsaV3_5G029080	Wax gourd	cucwgoB514
CsaV3_5G029080	Wax gourd	cucwgoB534